View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_high_95 (Length: 247)
Name: NF15745_high_95
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_high_95 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 6273164 - 6272945
Alignment:
| Q |
17 |
atatagttaatataatttagatatgtgattaatcatgtttattaaatgattaatgagtatgataaggtgtaccaaatcagttattaatcacatataaaga |
116 |
Q |
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| T |
6273164 |
atatagttaatataatttagatatgtgattaatcatgtttattaaatgattaatgagtatgataaggtgtaccaaatcagttattaatcacatataaaga |
6273065 |
T |
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| Q |
117 |
ttaaacgtaatataagcaaattaaaaatttagaacnnnnnnnnatatatgttttaataacttagaacttctaattcaataattaaatatataaaatttag |
216 |
Q |
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| T |
6273064 |
ttaaacgtaatataagcaaattaaaaatttagaacttttttttatatatgttttaataacttagaacttctaattcaataattaaatatataaaatttag |
6272965 |
T |
|
| Q |
217 |
aatcatgtagtatgtttcat |
236 |
Q |
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| T |
6272964 |
aatcatgtagtatgtttcat |
6272945 |
T |
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