View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_low_10 (Length: 577)
Name: NF15745_low_10
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 15 - 577
Target Start/End: Original strand, 30928713 - 30929308
Alignment:
| Q |
15 |
gatagattcatgtagatggttattggaatgaaatgtggagagtcttggcaccaccaagagtgagacacctatttttgagggtgtttcaggggctgcattc |
114 |
Q |
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| T |
30928713 |
gatagattcatgtagatggttattggaatgaaatgtggagagtcttggcaccaccaagagtgag-cacctatttttgagggtgtttcaggggctgcattc |
30928811 |
T |
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| Q |
115 |
tgactcgacagaaaaagattcagaaaattgtacaatgttcttctagttgctcgt---------------------ataagatgcaggttctttgagtgtg |
193 |
Q |
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| T |
30928812 |
tgactcgacagaaaaagattcagaaaattgtacaatgttcttctagttgcttgttgtgtgattcgttcgtcgaggataagatgcaggttctttgagtgtg |
30928911 |
T |
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| Q |
194 |
agaagatggagtgttggatcgtgcgtggcaggcctgaatcatgttgtgcaaacactgcttcctcagttttagtcaatgggcgagttgttaatggaggtgt |
293 |
Q |
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| T |
30928912 |
agaagatggagtgttggatcgtgcgtggcaggcctgaatcatgttttgcaaacactgcttcctcagttttagtcaatgggcgagttgttaatggaggtgt |
30929011 |
T |
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| Q |
294 |
-------------atagattgaaacatgcaagaaccgctcctaacggcctagtttggtttggcttaagtgtaacatggatgtcgattttcatctaagatc |
380 |
Q |
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||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
30929012 |
tggcatgaggtgtataaattgaaacatgcaagaaccgctcctaacggcctagtctggtttggcttaagtgtaacatggatgtcgattttcgtctaagatc |
30929111 |
T |
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| Q |
381 |
gggtgttaggtctttaggatgtttcgtctaggatcctttgattgaatcgtgaatacacggttccattcccttacaactttgttttcctttttaattacaa |
480 |
Q |
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| T |
30929112 |
gggtgttaggtctttaggatgtttcgtctaggatcctttgattgaatcgtgaatacacggttccattcccttacaactttgttttcctttttaattacaa |
30929211 |
T |
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| Q |
481 |
tatggtcttaagaagtccaaactgaaaaataatcaaattatgacgacattagttcagtatgcataaacaaagacaagaccaaataattgacctaaac |
577 |
Q |
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| T |
30929212 |
tatggacttaagaagtccaaactgaaaaataatcaaattatgaccacattagtccagtatgcataaacaaagaccagaccaaataattgacctaaac |
30929308 |
T |
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