View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15745_low_104 (Length: 248)

Name: NF15745_low_104
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15745_low_104
NF15745_low_104
[»] chr3 (5 HSPs)
chr3 (97-245)||(45395411-45395560)
chr3 (1-69)||(23566943-23567011)
chr3 (1-67)||(39737778-39737844)
chr3 (18-66)||(785835-785883)
chr3 (147-213)||(50470355-50470421)
[»] scaffold0064 (1 HSPs)
scaffold0064 (96-245)||(19902-20052)
[»] chr6 (3 HSPs)
chr6 (97-245)||(17922842-17922991)
chr6 (1-62)||(604984-605045)
chr6 (1-67)||(8700890-8700956)
[»] chr5 (4 HSPs)
chr5 (97-225)||(3623465-3623594)
chr5 (1-69)||(39121888-39121956)
chr5 (1-61)||(14393983-14394043)
chr5 (21-69)||(20983543-20983591)
[»] chr4 (9 HSPs)
chr4 (1-96)||(38147357-38147459)
chr4 (1-69)||(12639775-12639843)
chr4 (3-61)||(28103806-28103864)
chr4 (1-62)||(917683-917744)
chr4 (21-69)||(43012754-43012802)
chr4 (1-69)||(12629834-12629902)
chr4 (1-37)||(28104385-28104421)
chr4 (1-62)||(25163430-25163491)
chr4 (1-37)||(919140-919176)
[»] chr2 (6 HSPs)
chr2 (1-68)||(4329599-4329666)
chr2 (1-69)||(39865352-39865420)
chr2 (1-69)||(29770766-29770834)
chr2 (1-66)||(4330161-4330226)
chr2 (1-81)||(30674477-30674557)
chr2 (18-68)||(9074598-9074648)
[»] chr8 (4 HSPs)
chr8 (1-65)||(26759207-26759271)
chr8 (17-72)||(308301-308356)
chr8 (1-61)||(186682-186742)
chr8 (1-60)||(146644-146703)
[»] chr7 (6 HSPs)
chr7 (1-69)||(31167008-31167076)
chr7 (17-72)||(28750990-28751045)
chr7 (1-48)||(27596002-27596049)
chr7 (1-68)||(38916440-38916507)
chr7 (1-68)||(21972117-21972184)
chr7 (1-57)||(21971546-21971601)
[»] chr1 (1 HSPs)
chr1 (1-69)||(23269946-23270014)


Alignment Details
Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 45395560 - 45395411
Alignment:
Q  97 ggaaaatgctttattacacgacataaaccatgcacgagaaacccacgatgctattacaatccttggatgtttttctttccattaattaattatattctct 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  45395560 ggaaaatgctttattacacgacataaaccatgcacgagaaacccacgatgttattaccatccttggatatttttctttccattaactaattatattctct 45395461  T
Q  197 caccccatgttttcc-ttccaccgcttgatgtccacaggttctgctcgtt 245  Q
    || |||||||||||| |||||||||||||||||||||  ||| |||||||    
T  45395460 catcccatgttttcctttccaccgcttgatgtccacaaattccgctcgtt 45395411  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23566943 - 23567011
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    ||||||||||||||||||||||| ||  ||||||||| | |||||||| ||||||||||||||||||||    
T  23566943 tttaattgagatgaattaagtgatattcatttatttaattactatttattgttccttatccagtgcccc 23567011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39737778 - 39737844
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcc 67  Q
    ||||||||||||||||||| | ||||| ||||||||| | |||||||| ||||||||||||||||||    
T  39737778 tttaattgagatgaattaaataagatctatttatttaattactatttattgttccttatccagtgcc 39737844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 785835 - 785883
Alignment:
Q  18 aagtgagatcaatttatttattgactatttactgttccttatccagtgc 66  Q
    |||||||||| |||||||||||| ||||||| |||||||||| ||||||    
T  785835 aagtgagatccatttatttattgcctatttaatgttccttattcagtgc 785883  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 50470421 - 50470355
Alignment:
Q  147 ctattacaatccttggatgtttttctttccattaattaattatattctctcaccccatgttttcctt 213  Q
    ||||||| ||| |||||||||| | ||||| |||| |||||  |||||||| |||||||||||||||    
T  50470421 ctattaccatctttggatgtttatatttccgttaactaattgaattctctctccccatgttttcctt 50470355  T

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Target: scaffold0064 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 96 - 245
Target Start/End: Complemental strand, 20052 - 19902
Alignment:
Q  96 tggaaaatgctttattacacgacataaaccatgcacgagaaacccacgatgctattacaatccttggatgtttttctttccattaattaattatattctc 195  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||    
T  20052 tggaaaatgctttattacacgacataaaccatgcacgagaaagccacgatgttattatcatccttggatgtttttctttccattaattgattatattctc 19953  T
Q  196 tcaccccatgttttcc-ttccaccgcttgatgtccacaggttctgctcgtt 245  Q
    ||| |||||||||||| |||||||||||||||||||||  ||| |||||||    
T  19952 tcatcccatgttttcctttccaccgcttgatgtccacaaattccgctcgtt 19902  T

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Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 17922991 - 17922842
Alignment:
Q  97 ggaaaatgctttattacacgacataaaccatgcacgagaaacccacgatgctattacaatccttggatgtttttctttccattaattaattatattctct 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||    
T  17922991 ggaaaatgctttattacacgacataaaccatgcacgagaaacccacgatgctattaccacccttggatgtttttctttccattagctaattatattctct 17922892  T
Q  197 caccccatgtttt--ccttccaccgcttgatgtccacaggttctgctcgtt 245  Q
    || ||||||||||  | |||||||||||||||||||||  ||| |||||||    
T  17922891 ca-cccatgtttttcctttccaccgcttgatgtccacaaattccgctcgtt 17922842  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 605045 - 604984
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatcca 62  Q
    ||||||| || | ||| |||||||||| |||||||||||| ||||||| |||||||||||||    
T  605045 tttaattaaggtaaatcaagtgagatccatttatttattgcctatttattgttccttatcca 604984  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8700956 - 8700890
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcc 67  Q
    ||||||| || | ||| |||||||||| || ||||||||| ||||||| |||||||||||| |||||    
T  8700956 tttaattaaggtaaatcaagtgagatccatctatttattgcctatttattgttccttatccggtgcc 8700890  T

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Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 3623594 - 3623465
Alignment:
Q  97 ggaaaatgctttattacacgacataaaccatgcacgagaaacccacgatgctattacaatccttggatgtttttctttccattaattaattatattctct 196  Q
    |||||||||||||||  |||| | |||||||||||||||| ||||| | |||||||| | |||||||||||||| |||||||||| ||||||||||||||    
T  3623594 ggaaaatgctttatttgacgatagaaaccatgcacgagaagcccacaaagctattaccacccttggatgtttttatttccattaactaattatattctct 3623495  T
Q  197 caccccatgttttcc-ttccaccgcttgat 225  Q
    |||||||| |||||| ||||| ||||||||    
T  3623494 caccccatattttcctttccatcgcttgat 3623465  T

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Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39121888 - 39121956
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    |||||||||||| |||||||||||||  ||||||||| | |||||||| ||||||||||||||||||||    
T  39121888 tttaattgagataaattaagtgagattcatttatttaattactatttattgttccttatccagtgcccc 39121956  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14394043 - 14393983
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatcc 61  Q
    ||||||| |||| ||| |||||||||| ||||||||||||  |||||| ||||||||||||    
T  14394043 tttaattaagataaatcaagtgagatccatttatttattgcttatttattgttccttatcc 14393983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 20983591 - 20983543
Alignment:
Q  21 tgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    ||||||| |||||||||||| ||||||| | || |||||||||||||||    
T  20983591 tgagatccatttatttattgtctatttattttttcttatccagtgcccc 20983543  T

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Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38147459 - 38147357
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgccc-------ctggttaacattgcccaaattatta 93  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       | ||||| |||||||||||||||||    
T  38147459 tttaattgagatgaattaagtgagatccatttatttattgactatttactgttccttatccagtgcccgaaagcaccggttagcattgcccaaattatta 38147360  T
Q  94 aat 96  Q
    |||    
T  38147359 aat 38147357  T

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Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12639775 - 12639843
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||    
T  12639775 tttaattgaggtgaattaagtgagatccatttatttattgcctatttattgttccttatccagtacccc 12639843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28103864 - 28103806
Alignment:
Q  3 taattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatcc 61  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||    
T  28103864 taattgagatgaattaagtgagatccatttatttaatgattatttattgttccttatcc 28103806  T

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Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 917744 - 917683
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatcca 62  Q
    ||||||||||||||||||| | ||||  |||||||||||||||||||| ||||| |||||||    
T  917744 tttaattgagatgaattaacttagattcatttatttattgactatttattgttctttatcca 917683  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 43012802 - 43012754
Alignment:
Q  21 tgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  43012802 tgagatccatttatttattgtctatttattgttccttatccagtgcccc 43012754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12629902 - 12629834
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    |||||||||| | ||| | || ||||| ||| |||||||| ||||||| ||||||||||||||||||||    
T  12629902 tttaattgaggtaaatcatgtaagatctattcatttattgtctatttaatgttccttatccagtgcccc 12629834  T

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Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28104385 - 28104421
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttattta 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28104385 tttaattgagatgaattaagtgagatccatttattta 28104421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25163491 - 25163430
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatcca 62  Q
    |||||||||| | ||| |||| ||||| ||| |||||||| ||||||| |||||||||||||    
T  25163491 tttaattgaggtaaataaagtaagatctattcatttattgtctatttaatgttccttatcca 25163430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 919140 - 919176
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttattta 37  Q
    ||||||||||||||||||||||||||  |||||||||    
T  919140 tttaattgagatgaattaagtgagattcatttattta 919176  T

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Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4329666 - 4329599
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgccc 68  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  4329666 tttaattgagatgaattaagtgagatctatttatttattaactatttactgttccttatccagtgccc 4329599  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39865352 - 39865420
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    ||||||||||||||||||||||||||  ||||||||| | |||||||| ||||||||||||||||||||    
T  39865352 tttaattgagatgaattaagtgagattcatttatttaattactatttattgttccttatccagtgcccc 39865420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29770834 - 29770766
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    ||||| ||||||||||||||||||||  ||||||||| | |||||||| ||||||||||||||||||||    
T  29770834 tttaactgagatgaattaagtgagattcatttatttaattactatttattgttccttatccagtgcccc 29770766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4330161 - 4330226
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgc 66  Q
    ||||||||||||||||||||||||||| ||||||||| ||  |||| | |||||||||||||||||    
T  4330161 tttaattgagatgaattaagtgagatccatttatttaatgcatattaattgttccttatccagtgc 4330226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30674477 - 30674557
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccctggttaacattg 81  Q
    ||||||| |||| ||| |||||||||| ||||||||||||  |||| | ||||| |||||| ||||||| ||||| |||||    
T  30674477 tttaattaagataaatcaagtgagatctatttatttattgcttattaattgttctttatccggtgcccccggttagcattg 30674557  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 9074648 - 9074598
Alignment:
Q  18 aagtgagatcaatttatttattgactatttactgttccttatccagtgccc 68  Q
    |||||||||| |||||||||||| ||||||| ||||| |||||| ||||||    
T  9074648 aagtgagatccatttatttattgtctatttattgttctttatccggtgccc 9074598  T

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Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 26759271 - 26759207
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtg 65  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||    
T  26759271 tttaattgagatgaattaagtgagatccatttatttaattactatttattgttccttatccagtg 26759207  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 308356 - 308301
Alignment:
Q  17 taagtgagatcaatttatttattgactatttactgttccttatccagtgcccctgg 72  Q
    ||||||||||| |||||||||||| ||||||| ||||| |||||| ||||||||||    
T  308356 taagtgagatccatttatttattgcctatttattgttcattatccggtgcccctgg 308301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 186742 - 186682
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatcc 61  Q
    ||||||| |||| ||| |||||||||| |||||||||||  ||||||| ||||||||||||    
T  186742 tttaattaagataaatcaagtgagatccatttatttattagctatttattgttccttatcc 186682  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 146703 - 146644
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatc 60  Q
    |||||||||||| ||| |||||||||| ||||||||| || ||||||| ||||| |||||    
T  146703 tttaattgagattaataaagtgagatccatttatttaatggctatttattgttcattatc 146644  T

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Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31167008 - 31167076
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    ||||||||||||||||||||||||||  ||||||||| | |||||||| ||||||||||||||||||||    
T  31167008 tttaattgagatgaattaagtgagattcatttatttaattactatttattgttccttatccagtgcccc 31167076  T

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Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 28750990 - 28751045
Alignment:
Q  17 taagtgagatcaatttatttattgactatttactgttccttatccagtgcccctgg 72  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  28750990 taagtgagatccatttatttattgcctatttattgttccttatccagtgcccctgg 28751045  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27596049 - 27596002
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactattta 48  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  27596049 tttaattgagatgaattaagtgagatccatttatttattggctattta 27596002  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38916440 - 38916507
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgccc 68  Q
    ||||||| || | ||| |||||||||| |||||||||||| ||||||| ||||| |||||||||||||    
T  38916440 tttaattaaggtaaatcaagtgagatccatttatttattgtctatttattgttctttatccagtgccc 38916507  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21972117 - 21972184
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgccc 68  Q
    ||||||| ||||||||||||||||||  ||||||||| ||  | || | |||||||||||||||||||    
T  21972117 tttaattaagatgaattaagtgagattcatttatttaatgcattttaattgttccttatccagtgccc 21972184  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21971601 - 21971546
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttcctt 57  Q
    |||||||||||||| |||||||||||| ||||||||| | | |||||| ||||||||    
T  21971601 tttaattgagatgagttaagtgagatc-atttatttaattattatttattgttcctt 21971546  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23270014 - 23269946
Alignment:
Q  1 tttaattgagatgaattaagtgagatcaatttatttattgactatttactgttccttatccagtgcccc 69  Q
    |||||||||| | ||| |||| ||||| ||| |||||||| ||||||| ||||||||||||||||||||    
T  23270014 tttaattgaggtaaatcaagtaagatctattcatttattgtctatttaatgttccttatccagtgcccc 23269946  T

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