View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15745_low_11 (Length: 550)

Name: NF15745_low_11
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15745_low_11
NF15745_low_11
[»] chr2 (18 HSPs)
chr2 (208-379)||(5455917-5456082)
chr2 (16-142)||(5456148-5456275)
chr2 (460-548)||(5455830-5455918)
chr2 (415-493)||(7678228-7678306)
chr2 (441-489)||(7261194-7261242)
chr2 (457-501)||(8209318-8209362)
chr2 (467-527)||(15141879-15141939)
chr2 (467-517)||(1208625-1208675)
chr2 (444-489)||(34421626-34421671)
chr2 (467-527)||(3496810-3496870)
chr2 (467-519)||(19037078-19037130)
chr2 (454-534)||(40204746-40204826)
chr2 (467-526)||(11226146-11226205)
chr2 (399-493)||(11532697-11532792)
chr2 (475-534)||(14818700-14818759)
chr2 (454-517)||(23395942-23396005)
chr2 (450-536)||(21099992-21100078)
chr2 (454-507)||(41069692-41069745)
[»] chr6 (13 HSPs)
chr6 (444-531)||(28067307-28067394)
chr6 (462-526)||(6139318-6139382)
chr6 (467-519)||(7506639-7506691)
chr6 (467-527)||(9928260-9928320)
chr6 (454-506)||(24226078-24226130)
chr6 (467-506)||(6793514-6793553)
chr6 (467-501)||(512768-512802)
chr6 (467-517)||(33906586-33906636)
chr6 (454-535)||(32267037-32267118)
chr6 (454-506)||(9976975-9977027)
chr6 (450-482)||(19649554-19649586)
chr6 (467-507)||(22469718-22469758)
chr6 (469-533)||(26847133-26847197)
[»] chr7 (15 HSPs)
chr7 (446-536)||(30880447-30880537)
chr7 (450-517)||(36436041-36436108)
chr7 (454-506)||(22715835-22715887)
chr7 (467-534)||(38701539-38701606)
chr7 (467-529)||(30061174-30061236)
chr7 (467-501)||(42691101-42691135)
chr7 (460-533)||(40591008-40591081)
chr7 (467-527)||(16876748-16876808)
chr7 (467-527)||(18867959-18868019)
chr7 (467-527)||(23185934-23185994)
chr7 (467-527)||(46425349-46425409)
chr7 (454-517)||(2628455-2628518)
chr7 (454-517)||(27311793-27311856)
chr7 (467-526)||(42971675-42971734)
chr7 (467-507)||(34328124-34328164)
[»] chr4 (16 HSPs)
chr4 (456-535)||(33913938-33914019)
chr4 (454-497)||(5052117-5052160)
chr4 (399-506)||(5655745-5655852)
chr4 (454-537)||(52198337-52198420)
chr4 (467-529)||(36498631-36498693)
chr4 (454-507)||(50041833-50041886)
chr4 (454-507)||(50049055-50049108)
chr4 (444-536)||(888689-888781)
chr4 (454-526)||(29544181-29544253)
chr4 (455-534)||(53363692-53363769)
chr4 (454-497)||(52673217-52673260)
chr4 (446-488)||(5787921-5787963)
chr4 (454-507)||(46079359-46079412)
chr4 (446-483)||(46876141-46876178)
chr4 (460-525)||(39833245-39833312)
chr4 (454-510)||(40202267-40202323)
[»] chr8 (9 HSPs)
chr8 (454-535)||(35910569-35910652)
chr8 (410-489)||(28071148-28071229)
chr8 (454-507)||(44132892-44132945)
chr8 (454-533)||(12964323-12964402)
chr8 (467-527)||(33938624-33938684)
chr8 (454-534)||(41951176-41951256)
chr8 (454-536)||(1898116-1898198)
chr8 (432-497)||(27565686-27565751)
chr8 (467-527)||(16467598-16467658)
[»] chr1 (18 HSPs)
chr1 (441-536)||(7536989-7537084)
chr1 (467-506)||(17368428-17368467)
chr1 (454-517)||(48915004-48915067)
chr1 (454-517)||(48915194-48915257)
chr1 (454-517)||(48915395-48915458)
chr1 (459-526)||(49177245-49177312)
chr1 (454-534)||(26056779-26056862)
chr1 (467-531)||(11872220-11872284)
chr1 (467-527)||(27032331-27032391)
chr1 (467-527)||(27907702-27907762)
chr1 (467-527)||(48843375-48843435)
chr1 (467-527)||(51748551-51748611)
chr1 (433-484)||(3419126-3419176)
chr1 (472-525)||(4347451-4347504)
chr1 (454-507)||(19456329-19456382)
chr1 (469-506)||(37719064-37719101)
chr1 (441-506)||(45487245-45487310)
chr1 (467-507)||(19431422-19431462)
[»] chr5 (5 HSPs)
chr5 (467-529)||(3622234-3622296)
chr5 (454-506)||(9956627-9956679)
chr5 (467-517)||(3622359-3622409)
chr5 (467-501)||(33953153-33953187)
chr5 (454-487)||(28975602-28975635)
[»] chr3 (14 HSPs)
chr3 (415-497)||(19138361-19138443)
chr3 (467-527)||(39972991-39973051)
chr3 (467-527)||(39994190-39994250)
chr3 (443-498)||(861149-861203)
chr3 (467-529)||(30240865-30240927)
chr3 (467-527)||(4037140-4037200)
chr3 (454-526)||(10688608-10688680)
chr3 (467-527)||(11233505-11233565)
chr3 (467-535)||(27825050-27825118)
chr3 (444-488)||(35215489-35215532)
chr3 (467-527)||(49279488-49279548)
chr3 (410-489)||(40902271-40902350)
chr3 (451-527)||(26580822-26580896)
chr3 (466-526)||(8940876-8940936)
[»] scaffold0176 (1 HSPs)
scaffold0176 (467-507)||(15110-15150)


Alignment Details
Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 208 - 379
Target Start/End: Complemental strand, 5456082 - 5455917
Alignment:
Q  208 gtgtcatatgagatcatcaagtattagttggcaattcaactcatgaaaatatccaagcttcattgctataacnnnnnnnnnnnnnnnnaaactaaaggtg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||    
T  5456082 gtgtcatatgagatcatcaagtattagttggcaattcaactcatgaaaatatccaagcttcattgctataactttcttttttt------aactaaaggtg 5455989  T
Q  308 cagttttagttagataaaccaataatataacacaaaaaagacccgatacaataataagagaaaagatgacat 379  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5455988 cagttttggttagataaaccaataatataacacaaaaaagacccgatacaataataagagaaaagatgacat 5455917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 5456275 - 5456148
Alignment:
Q  16 gtaaatactgagatgtagaaggtgtatgcattataaaactgaaatgaactgttatgagtaaatgaaaacaa-ttttagagnnnnnnnnntgttacaaaca 114  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||||    
T  5456275 gtaaatactgagatgtagaaggtgcatgcaatttaaaactgaaatgaactgttatgagtaaatgaaaacaatttttagagaaaaaaaaatgttacaaaca 5456176  T
Q  115 tgctgatatgtcattttcttcccatctg 142  Q
    ||||||||||||||||||||||||||||    
T  5456175 tgctgatatgtcattttcttcccatctg 5456148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 460 - 548
Target Start/End: Complemental strand, 5455918 - 5455830
Alignment:
Q  460 ataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaacttcatctcactcg 548  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||    
T  5455918 ataaatgattaaaataaattattttggtgagagagaattatttgttagtagtaagataaaaacaaagtcatcaaacttcatatcactcg 5455830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 415 - 493
Target Start/End: Original strand, 7678228 - 7678306
Alignment:
Q  415 ttgagttttgatgatactgatgattctaatgtatttaattgataaataaattattaaaataaattattttgatgagaga 493  Q
    ||||||||| ||||||  || |||| |||| |||||| ||||||||||||| |||||||||| |||||| |||||||||    
T  7678228 ttgagttttaatgatatcgacgattataatatatttagttgataaataaataattaaaataagttatttcgatgagaga 7678306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 489
Target Start/End: Complemental strand, 7261242 - 7261194
Alignment:
Q  441 taatgtatttaattgataaataaattattaaaataaattattttgatga 489  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  7261242 taatatatttaattgatagataaataattaaaataaattattttgatga 7261194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 8209362 - 8209318
Alignment:
Q  457 taaataaattattaaaataaattattttgatgagagagaattatt 501  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||    
T  8209362 taaatgaatgattaaaataaattattttgatgagagagaattatt 8209318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 15141939 - 15141879
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | |||||||||| |||||| | |||||||    
T  15141939 attaaaataaattatttagatgagagagaataagttgttaaaagagagatagacacaaagt 15141879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 517
Target Start/End: Complemental strand, 1208675 - 1208625
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||||||||||||||||| |||||||||||||||| ||||| || ||||||    
T  1208675 attaaaataaattattttaatgagagagaattattggttaagagagagata 1208625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 34421626 - 34421671
Alignment:
Q  444 tgtatttaattgataaataaattattaaaataaattattttgatga 489  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||    
T  34421626 tgtatttagttgataaataaataattaaaataagttattttgatga 34421671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 3496810 - 3496870
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  3496810 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 3496870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 519
Target Start/End: Original strand, 19037078 - 19037130
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaa 519  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || ||||||||    
T  19037078 attaaaataaattatttagatgagagagaatgagttgttaagagagagataaa 19037130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 534
Target Start/End: Original strand, 40204746 - 40204826
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaa 534  Q
    ||||| || ||||||||||||||||||||| | ||| ||||||| |||  |||| || |||||| |||||| |||||||||    
T  40204746 tgatagatgaattattaaaataaattatttaggtgaaagagaataattgattaagagggagatataaacaatgtcatcaaa 40204826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 526
Target Start/End: Complemental strand, 11226205 - 11226146
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | ||||||    
T  11226205 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaag 11226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 493
Target Start/End: Original strand, 11532697 - 11532792
Alignment:
Q  399 aaatatttgaatgacgttgagttttgatgatactgatgattctaatgtatttaattgataaataaattattaaaataaatta-ttttgatgagaga 493  Q
    ||||||||| || || ||||| |||  ||| | |||||| | ||||||||||||||||||||||||  ||||||||| |||| |||| ||||||||    
T  11532697 aaatatttggataacattgagcttttgtgacattgatgactttaatgtatttaattgataaataaacgattaaaatagattacttttaatgagaga 11532792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 534
Target Start/End: Complemental strand, 14818759 - 14818700
Alignment:
Q  475 aaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaa 534  Q
    ||||||||||||||||||||||||||| ||||  || |||||| | ||||||||| ||||    
T  14818759 aaattattttgatgagagagaattattggttatgagagagatagagacaaagtcaccaaa 14818700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 517
Target Start/End: Complemental strand, 23396005 - 23395942
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||||||| ||| ||||||||||||||||| ||||| ||||||| | ||||||| || ||||||    
T  23396005 tgataaatgaatgattaaaataaattatttagatgatagagaatgagttgttaagagagagata 23395942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 536
Target Start/End: Original strand, 21099992 - 21100078
Alignment:
Q  450 taattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaact 536  Q
    ||||| |||||| ||| ||||||||||||||||||||||   || |||||||  ||| ||  |||||||||| |||||||| |||||    
T  21099992 taattaataaatgaataattaaaataaattattttgatgtacgaaaattattaattagaaaagagataaaaataaagtcattaaact 21100078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 41069692 - 41069745
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaa 507  Q
    |||| ||| ||| ||||||||||||||||| ||||||||||||| | |||||||    
T  41069692 tgatgaatgaatgattaaaataaattatttagatgagagagaatgaattgttaa 41069745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 444 - 531
Target Start/End: Complemental strand, 28067394 - 28067307
Alignment:
Q  444 tgtatttaattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatc 531  Q
    ||||||||||||| | || ||| ||||||||||||||||||||||||||||||| ||| |||| ||| |||||||| ||||| |||||    
T  28067394 tgtatttaattgacagatgaatgattaaaataaattattttgatgagagagaatgattggttagaagagagataaagacaaaatcatc 28067307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 526
Target Start/End: Complemental strand, 6139382 - 6139318
Alignment:
Q  462 aaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    |||| ||||||||||||||||| ||||||||||||| | | |||||||| ||||||  |||||||    
T  6139382 aaatgattaaaataaattatttagatgagagagaatgaatggttaaaagagagataggaacaaag 6139318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 519
Target Start/End: Complemental strand, 7506691 - 7506639
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaa 519  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || ||||||||    
T  7506691 attaaaataaattatttagatgagagagaatgagttgttaagagagagataaa 7506639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 9928320 - 9928260
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  9928320 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 9928260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 24226130 - 24226078
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgtta 506  Q
    ||||| || ||| ||||||||||||||||||||||| ||||||||||| ||||    
T  24226130 tgatagatgaatgattaaaataaattattttgatgacagagaattattggtta 24226078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 506
Target Start/End: Complemental strand, 6793553 - 6793514
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgtta 506  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  6793553 attaaaataaattattttgatgagagataattattggtta 6793514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 501
Target Start/End: Complemental strand, 512802 - 512768
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatt 501  Q
    |||||||||||||||||||||||||||||| ||||    
T  512802 attaaaataaattattttgatgagagagaaatatt 512768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 33906586 - 33906636
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||||||||||| |||||||||| ||||||||||| |||| ||| ||||||    
T  33906586 attaaaataaatgattttgatgaaagagaattattcgttagaagagagata 33906636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 535
Target Start/End: Original strand, 32267037 - 32267118
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaac 535  Q
    ||||| || ||| |||||||||||||||| |||||  ||||||||||| |||| ||  ||||| || | |||||||||||||    
T  32267037 tgatagattaatgattaaaataaattattctgatggaagagaattattggttagaaaagagattaagataaagtcatcaaac 32267118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 9976975 - 9977027
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgtta 506  Q
    ||||| || ||| ||||||||||||||||||||| |||||| || ||||||||    
T  9976975 tgatagatgaatgattaaaataaattattttgattagagaggatgatttgtta 9977027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 482
Target Start/End: Original strand, 19649554 - 19649586
Alignment:
Q  450 taattgataaataaattattaaaataaattatt 482  Q
    ||||||||||||||||||||||||| |||||||    
T  19649554 taattgataaataaattattaaaattaattatt 19649586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 507
Target Start/End: Complemental strand, 22469758 - 22469718
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||||||||||||||| ||||||||||||| | |||||||    
T  22469758 attaaaataaattatttagatgagagagaatgagttgttaa 22469718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 533
Target Start/End: Complemental strand, 26847197 - 26847133
Alignment:
Q  469 taaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaa 533  Q
    ||||||||||||||| ||| ||||| ||| |||  ||||||| |||||| |||||| ||||||||    
T  26847197 taaaataaattatttagataagagataataattgattaaaagagagatataaacaatgtcatcaa 26847133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 446 - 536
Target Start/End: Original strand, 30880447 - 30880537
Alignment:
Q  446 tatttaattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaact 536  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||  |||  || |||||||| | ||||||||||||||    
T  30880447 tatttaattgataaatgaattattaaaataaattattttgatgtgagataatgattgattatgagagagataaagataaagtcatcaaact 30880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 450 - 517
Target Start/End: Original strand, 36436041 - 36436108
Alignment:
Q  450 taattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| ||| |||| ||| ||||||    
T  36436041 taattgataaatgaattattaaaataaatcattttgatgagagagaatgattagttagaagagagata 36436108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 22715835 - 22715887
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgtta 506  Q
    ||||| |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  22715835 tgatagataaatgattaaaataaattattttgacgagagaaaattatttgtta 22715887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 534
Target Start/End: Original strand, 38701539 - 38701606
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaa 534  Q
    |||||||| |||||||||||||| ||||||||||| |||| ||| || ||| ||||||||||| ||||    
T  38701539 attaaaattaattattttgatgaaagagaattattggttagaagagatatagaaacaaagtcaccaaa 38701606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 30061174 - 30061236
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtca 529  Q
    ||||||||||||||||| ||||||||| |||||||  |||| || ||||||||||||| ||||    
T  30061174 attaaaataaattatttagatgagagaaaattattgattaacagagagataaaaacaatgtca 30061236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 501
Target Start/End: Original strand, 42691101 - 42691135
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatt 501  Q
    |||||||||||||||||||||||||||||||||||    
T  42691101 attaaaataaattattttgatgagagagaattatt 42691135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 533
Target Start/End: Complemental strand, 40591081 - 40591008
Alignment:
Q  460 ataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaa 533  Q
    |||||| ||||||||||||||||| ||||| ||||||| |||  ||||||| ||||||  ||||| ||||||||    
T  40591081 ataaatgattaaaataaattatttagatgaaagagaataattgattaaaagagagatatgaacaatgtcatcaa 40591008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 16876748 - 16876808
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  16876748 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 16876808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 18867959 - 18868019
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  18867959 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 18868019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 23185934 - 23185994
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  23185934 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 23185994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 46425349 - 46425409
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  46425349 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 46425409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 2628455 - 2628518
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||| ||||||| ||||||||||| ||||| ||||||||||||| | ||||||| || ||||||    
T  2628455 tgatgaataaatgattaaaataaactatttagatgagagagaatgagttgttaagagagagata 2628518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 27311793 - 27311856
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    ||||| || ||| |||||||||| ||||||||||| |||||||||||| ||||| || ||||||    
T  27311793 tgatagatgaatgattaaaataatttattttgatgtgagagaattattagttaagagagagata 27311856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 526
Target Start/End: Original strand, 42971675 - 42971734
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    ||||||||||||||||| ||||||||||||||  | ||||| || |||||| ||||||||    
T  42971675 attaaaataaattatttagatgagagagaattgatggttaagagagagatagaaacaaag 42971734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 507
Target Start/End: Complemental strand, 34328164 - 34328124
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||||||||||||||| ||||||||||||| | |||||||    
T  34328164 attaaaataaattatttagatgagagagaatgagttgttaa 34328124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 456 - 535
Target Start/End: Complemental strand, 33914019 - 33913938
Alignment:
Q  456 ataaataaattattaaaataaattattttgatgagagagaattatttgtta--aaagtgagataaaaacaaagtcatcaaac 535  Q
    |||||| ||| |||||||||||| |||||||||||||||||||||| ||||  | || |||||||| |||||||||||||||    
T  33914019 ataaatgaatgattaaaataaatcattttgatgagagagaattattggttaggagagagagataaagacaaagtcatcaaac 33913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 5052160 - 5052117
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaat 497  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  5052160 tgataaataaatgattaaaataaattattttgatgagagagaat 5052117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 506
Target Start/End: Complemental strand, 5655852 - 5655745
Alignment:
Q  399 aaatatttgaatgacgttgagttttgatgatactgatgattctaatgtatttaattgataaataaattattaaaataaattattttgatgagagagaatt 498  Q
    |||||||||  |||| |||||||||||||||  || ||| | |||||||||||||||||| |  |||||||| |||||| ||||||| ||||| |||||     
T  5655852 aaatatttggttgacattgagttttgatgattttggtgactttaatgtatttaattgatagacgaattattagaataaaatattttggtgagaaagaatg 5655753  T
Q  499 atttgtta 506  Q
    ||| ||||    
T  5655752 attagtta 5655745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 537
Target Start/End: Complemental strand, 52198420 - 52198337
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaactt 537  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||| |||| ||  |||||| | | |||||| ||||||||    
T  52198420 tgatagataaatgattaaaataaattattttgatgagagataattattggttagaatcgagatagagataaagtcgtcaaactt 52198337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 36498631 - 36498693
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtca 529  Q
    |||||||||||||||||||||| |||||||||||| |||| ||| |||||| | |||||||||    
T  36498631 attaaaataaattattttgatgtgagagaattattggttagaagagagatagagacaaagtca 36498693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 50041833 - 50041886
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||| |||||    
T  50041833 tgatagatgaatgattaaaataaattattttgatgagagagaattattggttaa 50041886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 50049055 - 50049108
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||| |||||    
T  50049055 tgatagatgaatgattaaaataaattattttgatgagagagaattattggttaa 50049108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 536
Target Start/End: Original strand, 888689 - 888781
Alignment:
Q  444 tgtatttaattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaact 536  Q
    |||||||||||||||  | ||  ||||||||||||||||||||||||||  | | ||| |||| ||| || ||||| ||||||||| ||||||    
T  888689 tgtatttaattgataggtgaaagattaaaataaattattttgatgagaggtattgattagttataagagatataaagacaaagtcaccaaact 888781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 526
Target Start/End: Original strand, 29544181 - 29544253
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    |||||||| ||| ||||||||||||||||| ||||| ||||||| | ||||||| || |||||| | ||||||    
T  29544181 tgataaatgaatgattaaaataaattatttagatgatagagaatgagttgttaatagagagatagacacaaag 29544253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 534
Target Start/End: Original strand, 53363692 - 53363769
Alignment:
Q  455 gataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaa 534  Q
    |||| |||||| ||||||||||||||||||||||||| ||||| ||| ||| |||   ||||| ||||||||||| ||||    
T  53363692 gatagataaataattaaaataaattattttgatgagaaagaataattggtttaaa--aagatacaaacaaagtcaccaaa 53363769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 52673217 - 52673260
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaat 497  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||    
T  52673217 tgatgaatgaataattaaaataaattattttgatgagagagaat 52673260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 5787963 - 5787921
Alignment:
Q  446 tatttaattgataaataaattattaaaataaattattttgatg 488  Q
    |||||| |||| |||| ||||||||||||||||||||||||||    
T  5787963 tatttagttgacaaatgaattattaaaataaattattttgatg 5787921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 46079359 - 46079412
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaa 507  Q
    |||| ||| ||| ||||||||||||||||| ||||||||||||| | |||||||    
T  46079359 tgatcaatgaatgattaaaataaattatttagatgagagagaatgagttgttaa 46079412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 46876141 - 46876178
Alignment:
Q  446 tatttaattgataaataaattattaaaataaattattt 483  Q
    |||||||||||||||||||  |||||||||||||||||    
T  46876141 tatttaattgataaataaaagattaaaataaattattt 46876178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 525
Target Start/End: Complemental strand, 39833312 - 39833245
Alignment:
Q  460 ataaattattaaaataaattattttgatgagagagaattatttgttaaa--agtgagataaaaacaaa 525  Q
    |||||| ||| ||||||||||||||||||||| ||||| |||  |||||  ||||||||||| |||||    
T  39833312 ataaataattgaaataaattattttgatgagaaagaatcattaattaaaagagtgagataaagacaaa 39833245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 510
Target Start/End: Original strand, 40202267 - 40202323
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaag 510  Q
    |||| ||| ||||||||||||||||||||| ||||| ||||||| | | ||||||||    
T  40202267 tgatgaatgaattattaaaataaattatttagatgaaagagaatgagtggttaaaag 40202323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 454 - 535
Target Start/End: Complemental strand, 35910652 - 35910569
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgtta--aaagtgagataaaaacaaagtcatcaaac 535  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||| ||||  | || |||||||| |||||||||||||||    
T  35910652 tgataaatgaatgattaaaataaatcattttgatgagagggaattattggttaggagagagagataaagacaaagtcatcaaac 35910569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 489
Target Start/End: Original strand, 28071148 - 28071229
Alignment:
Q  410 tgacgttgagttttgatgatactgatgattctaatgtatttaattg--ataaataaattattaaaataaattattttgatga 489  Q
    ||||||||| ||||||||||| |||||||| |||||||||| ||||  ||| ||||||||||||||||| ||| ||| ||||    
T  28071148 tgacgttgaattttgatgatattgatgattttaatgtatttgattgacatatataaattattaaaataatttaattttatga 28071229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 44132892 - 44132945
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||| |||||    
T  44132892 tgatagatgaatgattaaaataaattattttgatgagagagaattattggttaa 44132945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 533
Target Start/End: Complemental strand, 12964402 - 12964323
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaa 533  Q
    ||||| || ||| ||||||||||||||||||||||| ||||||| |||  ||||||| || ||| | |||||||||||||    
T  12964402 tgatatatgaatgattaaaataaattattttgatgaaagagaatgattgattaaaagagaaatagacacaaagtcatcaa 12964323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 33938624 - 33938684
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  33938624 attaaaataaattatttagatgagagagaatgaattgttaagagagagatagacacaaagt 33938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 534
Target Start/End: Complemental strand, 41951256 - 41951176
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaa 534  Q
    |||||||| ||| | |||| |||||||| |||||||||||||||||||  |||  || |||||| | ||||||||||||||    
T  41951256 tgataaatgaatgagtaaattaaattatcttgatgagagagaattattgattaggagagagatagagacaaagtcatcaaa 41951176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 536
Target Start/End: Original strand, 1898116 - 1898198
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaact 536  Q
    ||||| |||| | ||||||||||||||||||||| | |||||||| ||   || ||| |||||||||||||| ||||| ||||    
T  1898116 tgatatataactgattaaaataaattattttgataaaagagaatttttaactagaagagagataaaaacaaaatcatctaact 1898198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 497
Target Start/End: Original strand, 27565686 - 27565751
Alignment:
Q  432 tgatgattctaatgtatttaattgataaataaattattaaaataaattattttgatgagagagaat 497  Q
    |||||||| || |||||||||||||| ||  | | ||||||||||||||| ||||||||| |||||    
T  27565686 tgatgattttagtgtatttaattgatcaacgagtgattaaaataaattatattgatgagatagaat 27565751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 16467658 - 16467598
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    |||||| |||||||||| ||||||||||||| | || |||| || |||||||| |||||||    
T  16467658 attaaactaaattatttagatgagagagaataaattattaagagagagataaacacaaagt 16467598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 536
Target Start/End: Original strand, 7536989 - 7537084
Alignment:
Q  441 taatgtatttaattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaact 536  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||| | ||||| | ||| ||||  || |||||| | ||||||||| ||||||    
T  7536989 taatgtatttgattgatatataaatgattaaaataaattattttgataaaagagagtgattggttaggagagagatagagacaaagtcaccaaact 7537084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 506
Target Start/End: Original strand, 17368428 - 17368467
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgtta 506  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  17368428 attaaaataaattattttgatgagagagaattattggtta 17368467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 48915004 - 48915067
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||| | ||||||| || ||||||    
T  48915004 tgatgaatgaatgattaaaataaattattttgatgagagagaatgagttgttaagagagagata 48915067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 48915194 - 48915257
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||| | ||||||| || ||||||    
T  48915194 tgatgaatgaatgattaaaataaattattttgatgagagagaatgagttgttaagagagagata 48915257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 517
Target Start/End: Original strand, 48915395 - 48915458
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||| | ||||||| || ||||||    
T  48915395 tgatgaatgaatgattaaaataaattattttgatgagagagaatgagttgttaagagagagata 48915458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 526
Target Start/End: Complemental strand, 49177312 - 49177245
Alignment:
Q  459 aataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    ||||||||||||||||||||||||| ||||||||| ||| | | |||||||| ||||||  |||||||    
T  49177312 aataaattattaaaataaattatttagatgagagaaaatgaatggttaaaagagagataggaacaaag 49177245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 534
Target Start/End: Complemental strand, 26056862 - 26056779
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaat---tatttgttaaaagtgagataaaaacaaagtcatcaaa 534  Q
    ||||| |||||| |||||||||||||||||| || | |||||||   || |||||| ||| |||||||| ||||||||||||||    
T  26056862 tgatagataaataattaaaataaattattttaataaaagagaattactacttgttagaagagagataaagacaaagtcatcaaa 26056779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 11872220 - 11872284
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatc 531  Q
    |||| |||||||||||||||||||||||||||||| ||||  || || ||| |||||||| ||||    
T  11872220 attataataaattattttgatgagagagaattattggttatgagagatatagaaacaaagacatc 11872284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 27032331 - 27032391
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  27032331 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 27032391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 27907762 - 27907702
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  27907762 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 27907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 48843435 - 48843375
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  48843435 attaaaataaattatttagatgagagagaatgaattgttaagagagagatagatacaaagt 48843375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 51748611 - 51748551
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||  ||||| | |||||||    
T  51748611 attaaaataaattatttagatgagagagaatgagttgttaaaagaaagatagacacaaagt 51748551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 484
Target Start/End: Complemental strand, 3419176 - 3419126
Alignment:
Q  433 gatgattctaatgtatttaattgataaataaattattaaaataaattatttt 484  Q
    ||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||    
T  3419176 gatgattttaatgtatttaattgat-aataaatgattgaaataaattatttt 3419126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 525
Target Start/End: Original strand, 4347451 - 4347504
Alignment:
Q  472 aataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaa 525  Q
    |||||||||||||||||| ||||||||||| |||| ||| || ||||| |||||    
T  4347451 aataaattattttgatgaaagagaattattagttagaagagatataaagacaaa 4347504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 507
Target Start/End: Original strand, 19456329 - 19456382
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaa 507  Q
    |||| |||| || ||||||||||||||||| ||||||||||||| | |||||||    
T  19456329 tgatgaatagatgattaaaataaattatttagatgagagagaatgaattgttaa 19456382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 37719101 - 37719064
Alignment:
Q  469 taaaataaattattttgatgagagagaattatttgtta 506  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  37719101 taaaataaattattttgatgagagataattattggtta 37719064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 506
Target Start/End: Original strand, 45487245 - 45487310
Alignment:
Q  441 taatgtatttaattgataaataaattattaaaataaattattttgatgagagagaattatttgtta 506  Q
    |||||||||||||| ||| |||||  |||||||||| ||||||||| || ||||||| ||| ||||    
T  45487245 taatgtatttaattaatagataaacaattaaaataagttattttgacgatagagaataattggtta 45487310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 507
Target Start/End: Original strand, 19431422 - 19431462
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||||||||||||||| ||||||||||||| ||| |||||    
T  19431422 attaaaataaattatttagatgagagagaatgattggttaa 19431462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 3622234 - 3622296
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtca 529  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||| |||||| | |||||||||    
T  3622234 attaaaataaattattttgatgagagaaaattattggttagaagagagatagagacaaagtca 3622296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 506
Target Start/End: Complemental strand, 9956679 - 9956627
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgtta 506  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||| ||||    
T  9956679 tgataaatgagtgattaaaataaattattttgatgagagagaattattggtta 9956627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 3622359 - 3622409
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagata 517  Q
    ||||||||||||||||||||||||| | || ||||||||| ||| ||||||    
T  3622359 attaaaataaattattttgatgagaaataactatttgttagaagagagata 3622409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 501
Target Start/End: Complemental strand, 33953187 - 33953153
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatt 501  Q
    ||||||||||||||||| |||||||||||||||||    
T  33953187 attaaaataaattatttagatgagagagaattatt 33953153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 28975635 - 28975602
Alignment:
Q  454 tgataaataaattattaaaataaattattttgat 487  Q
    |||||||||||| |||||||||||||||||||||    
T  28975635 tgataaataaatgattaaaataaattattttgat 28975602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 415 - 497
Target Start/End: Original strand, 19138361 - 19138443
Alignment:
Q  415 ttgagttttgatgatactgatgattctaatgtatttaattgataaataaattattaaaataaattattttgatgagagagaat 497  Q
    |||||||||||||||| |||||| | |  |||||||||| |||| |||||| ||||| | ||||||||||||||||| |||||    
T  19138361 ttgagttttgatgatattgatgactttggtgtatttaatcgatagataaatgattaatacaaattattttgatgagaaagaat 19138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 39973051 - 39972991
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||||||||||||||||| | ||||||| || |||||| | |||||||    
T  39973051 attaaaataaattattttgatgagagagaatgagttgttaagagagagatagacacaaagt 39972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 39994250 - 39994190
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | |||||||||| |||||| | |||||||    
T  39994250 attaaaataaattatttagatgagagagaatgagttgttaaaagagagatagatacaaagt 39994190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 498
Target Start/End: Original strand, 861149 - 861203
Alignment:
Q  443 atgtatttaattgataaataaattattaaaataaattattttgatgagagagaatt 498  Q
    ||||||||||||||||||| || |||| |||||||||||||| |||||||||||||    
T  861149 atgtatttaattgataaatgaaatattgaaataaattatttt-atgagagagaatt 861203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 30240927 - 30240865
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtca 529  Q
    ||||||||||||||||||||||||||||| | |||  |||| || |||||||||| |||||||    
T  30240927 attaaaataaattattttgatgagagagattaattgattaagagagagataaaaataaagtca 30240865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 4037200 - 4037140
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  4037200 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 4037140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 526
Target Start/End: Complemental strand, 10688680 - 10688608
Alignment:
Q  454 tgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    |||| ||| ||| ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | ||||||    
T  10688680 tgatgaatgaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaag 10688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 11233565 - 11233505
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  11233565 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 11233505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 535
Target Start/End: Original strand, 27825050 - 27825118
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagtcatcaaac 535  Q
    ||||||||||||||||||||||||| | ||||||| |||||||  |||||| | || || |||||||||    
T  27825050 attaaaataaattattttgatgagaaataattattagttaaaacagagatagagacgaaatcatcaaac 27825118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 488
Target Start/End: Original strand, 35215489 - 35215532
Alignment:
Q  444 tgtatttaattgataaataaattattaaaataaattattttgatg 488  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  35215489 tgtatttaattgataaataaatgatt-aaataaattattttgatg 35215532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 49279548 - 49279488
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||||||||| ||||||||||||| | ||||||| || |||||| | |||||||    
T  49279548 attaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagt 49279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 489
Target Start/End: Original strand, 40902271 - 40902350
Alignment:
Q  410 tgacgttgagttttgatgatactgatgattctaatgtatttaattgataaataaattattaaaataaattattttgatga 489  Q
    |||| ||| ||||||  |||| |||||| | ||||||||||||| |||| || ||| ||||||||||||||| |||||||    
T  40902271 tgacattgtgttttggcgatattgatgactttaatgtatttaatcgatagatgaatgattaaaataaattatattgatga 40902350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 527
Target Start/End: Original strand, 26580822 - 26580896
Alignment:
Q  451 aattgataaataaattattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaagt 527  Q
    ||||||||||| |||||||||||||||||| ||  || ||||| ||| |||  ||||||  ||||||||||||||||    
T  26580822 aattgataaattaattattaaaataaattagttaaataagagaaaatgattaattaaaa--gagataaaaacaaagt 26580896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 526
Target Start/End: Original strand, 8940876 - 8940936
Alignment:
Q  466 tattaaaataaattattttgatgagagagaattatttgttaaaagtgagataaaaacaaag 526  Q
    ||||||||||| |||||| ||||||||||||  |   |||||||||||||||| |||||||    
T  8940876 tattaaaataagttatttagatgagagagaacgagcagttaaaagtgagataagaacaaag 8940936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 507
Target Start/End: Complemental strand, 15150 - 15110
Alignment:
Q  467 attaaaataaattattttgatgagagagaattatttgttaa 507  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  15150 attaaaataaattattttgatgagagagaatgagttgttaa 15110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University