View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_low_113 (Length: 237)
Name: NF15745_low_113
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_low_113 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 14346427 - 14346208
Alignment:
| Q |
1 |
aataggtaagaaggcattcgaaagcgcgagcaaaagcccaactgttaggatgaagttgagtcggagaaatattcaaccagttcagtacctcacactcgaa |
100 |
Q |
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|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
14346427 |
aataggtaagaaggcattcgaacgcgctagcaaaagcccaactgttaggatgaagttgagacggagaaatattcaaccagttcagtacctcacactcgaa |
14346328 |
T |
|
| Q |
101 |
tctcgttaaaggaagtttcattccgagtcgcgtaaaaaatgtttcatagaaatagcaaaagtctgaacttatcatctttcattcttctaaaacaaacacg |
200 |
Q |
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|||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
14346327 |
tctcgttaaaggaagtttcattccaagttgcgtaaaaaatgtttcatagaaataacaaaagtctgaac-tatcatctttcattcttctaaaacaaacacg |
14346229 |
T |
|
| Q |
201 |
ttctgaatctacacagaaatc |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
14346228 |
ttctgaatctacacagaaatc |
14346208 |
T |
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