View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15745_low_115 (Length: 237)

Name: NF15745_low_115
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15745_low_115
NF15745_low_115
[»] chr2 (51 HSPs)
chr2 (25-129)||(43334804-43334909)
chr2 (26-127)||(25960591-25960693)
chr2 (25-127)||(36567259-36567362)
chr2 (25-127)||(18018579-18018680)
chr2 (25-127)||(4041961-4042064)
chr2 (25-127)||(8990944-8991047)
chr2 (33-127)||(18826207-18826302)
chr2 (25-127)||(40357454-40357557)
chr2 (39-127)||(18780395-18780484)
chr2 (33-127)||(8410911-8411006)
chr2 (25-127)||(8555757-8555860)
chr2 (25-127)||(3038928-3039030)
chr2 (25-123)||(12963956-12964056)
chr2 (43-127)||(13765920-13766005)
chr2 (43-127)||(3119833-3119917)
chr2 (25-127)||(1725907-1726009)
chr2 (33-126)||(10165420-10165512)
chr2 (25-127)||(38293886-38293988)
chr2 (45-123)||(44137152-44137231)
chr2 (25-127)||(38023428-38023529)
chr2 (39-127)||(14008310-14008398)
chr2 (25-121)||(32243472-32243568)
chr2 (25-127)||(19382875-19382977)
chr2 (43-124)||(7184137-7184218)
chr2 (34-127)||(26905810-26905904)
chr2 (78-125)||(31550245-31550292)
chr2 (34-127)||(13018459-13018553)
chr2 (82-127)||(31899337-31899382)
chr2 (34-127)||(34757611-34757706)
chr2 (34-127)||(11515050-11515144)
chr2 (89-127)||(13767480-13767518)
chr2 (43-127)||(11522161-11522246)
chr2 (78-127)||(44020390-44020439)
chr2 (25-112)||(725953-726041)
chr2 (91-127)||(7786471-7786507)
chr2 (85-127)||(28539407-28539449)
chr2 (34-127)||(37194273-37194367)
chr2 (42-127)||(39205031-39205117)
chr2 (34-127)||(43572525-43572619)
chr2 (86-127)||(16625785-16625826)
chr2 (34-127)||(21626129-21626225)
chr2 (71-127)||(35550139-35550195)
chr2 (34-112)||(26599245-26599324)
chr2 (93-127)||(6128835-6128869)
chr2 (34-127)||(21834947-21835041)
chr2 (34-127)||(40212009-40212103)
chr2 (68-112)||(1270698-1270742)
chr2 (87-127)||(1802046-1802086)
chr2 (68-128)||(13767243-13767303)
chr2 (79-123)||(30312400-30312444)
chr2 (79-127)||(31082857-31082905)
[»] chr1 (67 HSPs)
chr1 (25-127)||(896476-896579)
chr1 (25-127)||(23871444-23871547)
chr1 (25-127)||(39889639-39889742)
chr1 (25-127)||(42488608-42488711)
chr1 (25-127)||(13255341-13255444)
chr1 (25-127)||(17688337-17688439)
chr1 (25-127)||(27499981-27500084)
chr1 (33-127)||(47905670-47905765)
chr1 (25-127)||(7963971-7964074)
chr1 (25-127)||(33991538-33991641)
chr1 (25-127)||(47206405-47206507)
chr1 (25-127)||(2925916-2926018)
chr1 (25-127)||(42162034-42162137)
chr1 (25-127)||(12293807-12293912)
chr1 (25-127)||(1523592-1523695)
chr1 (25-124)||(1688201-1688300)
chr1 (25-127)||(8156318-8156422)
chr1 (25-127)||(14153109-14153211)
chr1 (25-117)||(7401517-7401611)
chr1 (25-127)||(13061378-13061480)
chr1 (25-123)||(26757140-26757239)
chr1 (25-127)||(30538730-30538833)
chr1 (78-127)||(32299153-32299202)
chr1 (25-123)||(40707189-40707280)
chr1 (33-127)||(36886874-36886969)
chr1 (26-127)||(39508768-39508870)
chr1 (78-127)||(938232-938281)
chr1 (78-127)||(2175385-2175434)
chr1 (78-127)||(43571946-43571995)
chr1 (79-127)||(15463862-15463910)
chr1 (25-127)||(38794967-38795071)
chr1 (43-116)||(11017614-11017686)
chr1 (34-124)||(36269749-36269840)
chr1 (68-127)||(50402783-50402841)
chr1 (44-120)||(50247611-50247689)
chr1 (82-127)||(26940648-26940693)
chr1 (34-110)||(51303174-51303251)
chr1 (79-127)||(17675248-17675296)
chr1 (25-127)||(45565127-45565230)
chr1 (39-127)||(2909129-2909218)
chr1 (86-127)||(36325774-36325815)
chr1 (25-127)||(51246555-51246647)
chr1 (88-127)||(28748251-28748290)
chr1 (68-127)||(38795387-38795446)
chr1 (85-127)||(33854820-33854862)
chr1 (85-127)||(33926060-33926102)
chr1 (34-127)||(46001572-46001666)
chr1 (86-127)||(20712197-20712238)
chr1 (39-127)||(41817280-41817369)
chr1 (86-127)||(43036304-43036345)
chr1 (71-127)||(39886905-39886961)
chr1 (87-127)||(50476588-50476628)
chr1 (79-119)||(52073447-52073487)
chr1 (68-127)||(6015472-6015531)
chr1 (25-63)||(32299091-32299129)
chr1 (34-127)||(37649597-37649691)
chr1 (85-127)||(47742605-47742647)
chr1 (78-127)||(17760466-17760515)
chr1 (39-127)||(19652276-19652365)
chr1 (79-124)||(27255251-27255296)
chr1 (82-127)||(48327330-48327375)
chr1 (50-117)||(7915535-7915603)
chr1 (85-125)||(23554960-23555000)
chr1 (68-124)||(32287621-32287677)
chr1 (87-127)||(33324683-33324723)
chr1 (87-127)||(50226090-50226130)
chr1 (79-127)||(50587086-50587134)
[»] chr7 (45 HSPs)
chr7 (25-127)||(23620774-23620877)
chr7 (25-127)||(3658492-3658595)
chr7 (25-127)||(33406613-33406716)
chr7 (25-127)||(3571740-3571843)
chr7 (25-127)||(28437523-28437626)
chr7 (33-127)||(41002232-41002327)
chr7 (43-127)||(42620333-42620418)
chr7 (27-127)||(36747296-36747395)
chr7 (33-127)||(33810193-33810288)
chr7 (25-123)||(47275987-47276086)
chr7 (25-127)||(5968034-5968127)
chr7 (25-127)||(33113620-33113722)
chr7 (45-127)||(43778556-43778640)
chr7 (25-126)||(34652035-34652135)
chr7 (80-127)||(43188910-43188957)
chr7 (43-125)||(16568515-16568597)
chr7 (43-125)||(16597065-16597147)
chr7 (82-127)||(38235849-38235894)
chr7 (86-127)||(43665150-43665191)
chr7 (25-123)||(7667150-7667248)
chr7 (71-126)||(42220082-42220136)
chr7 (25-123)||(46449172-46449268)
chr7 (34-127)||(2826228-2826322)
chr7 (86-123)||(39670848-39670885)
chr7 (79-127)||(38505325-38505373)
chr7 (76-127)||(33872101-33872152)
chr7 (68-127)||(42112940-42112999)
chr7 (43-127)||(4787984-4788068)
chr7 (39-127)||(16805548-16805637)
chr7 (79-127)||(19644343-19644392)
chr7 (86-127)||(35264873-35264914)
chr7 (87-127)||(25335367-25335407)
chr7 (79-127)||(43348220-43348268)
chr7 (91-127)||(45066787-45066823)
chr7 (34-127)||(6746560-6746644)
chr7 (73-128)||(10591884-10591939)
chr7 (79-127)||(44720131-44720181)
chr7 (85-127)||(31891334-31891376)
chr7 (85-127)||(42471488-42471530)
chr7 (86-127)||(17818345-17818386)
chr7 (87-127)||(1277998-1278038)
chr7 (87-127)||(30081032-30081072)
chr7 (85-125)||(30183894-30183934)
chr7 (91-127)||(41715837-41715873)
chr7 (68-127)||(46442749-46442809)
[»] chr4 (57 HSPs)
chr4 (25-127)||(7182172-7182275)
chr4 (25-127)||(13269950-13270053)
chr4 (25-127)||(20533924-20534027)
chr4 (25-127)||(41844432-41844535)
chr4 (26-125)||(56504452-56504551)
chr4 (25-127)||(41363793-41363896)
chr4 (25-127)||(17873194-17873296)
chr4 (25-127)||(52594607-52594708)
chr4 (25-120)||(904194-904290)
chr4 (25-127)||(31530016-31530119)
chr4 (25-127)||(47669807-47669910)
chr4 (25-127)||(13270256-13270357)
chr4 (25-127)||(38317209-38317313)
chr4 (25-127)||(48830795-48830898)
chr4 (25-127)||(49404604-49404707)
chr4 (39-124)||(17622456-17622541)
chr4 (38-127)||(32648985-32649075)
chr4 (39-127)||(3126993-3127081)
chr4 (47-127)||(24279933-24280014)
chr4 (25-127)||(16535688-16535791)
chr4 (43-124)||(38366043-38366124)
chr4 (25-127)||(21296086-21296189)
chr4 (39-127)||(36151351-36151440)
chr4 (43-127)||(54806485-54806570)
chr4 (81-127)||(32060700-32060746)
chr4 (81-127)||(32948507-32948553)
chr4 (34-119)||(42759640-42759726)
chr4 (47-127)||(25057643-25057723)
chr4 (34-127)||(12708815-12708909)
chr4 (82-124)||(23708191-23708233)
chr4 (34-127)||(30198752-30198846)
chr4 (34-127)||(33500526-33500620)
chr4 (78-127)||(21730308-21730357)
chr4 (90-127)||(37756704-37756741)
chr4 (39-127)||(38136815-38136904)
chr4 (79-127)||(24291437-24291485)
chr4 (88-127)||(49936563-49936602)
chr4 (34-127)||(42650642-42650736)
chr4 (78-124)||(55509928-55509974)
chr4 (34-126)||(30307379-30307468)
chr4 (72-127)||(40423054-40423109)
chr4 (85-127)||(11976895-11976937)
chr4 (34-127)||(16318623-16318717)
chr4 (70-112)||(24662743-24662785)
chr4 (34-127)||(28175445-28175539)
chr4 (85-127)||(43031699-43031741)
chr4 (85-127)||(48417591-48417633)
chr4 (86-127)||(6836459-6836500)
chr4 (43-119)||(15498783-15498860)
chr4 (79-120)||(46176925-46176966)
chr4 (87-127)||(8827801-8827841)
chr4 (91-127)||(9046396-9046432)
chr4 (27-63)||(31340786-31340822)
chr4 (78-118)||(43793448-43793488)
chr4 (79-127)||(45823597-45823645)
chr4 (33-108)||(45971565-45971641)
chr4 (79-127)||(49668095-49668143)
[»] chr8 (35 HSPs)
chr8 (25-127)||(6816-6919)
chr8 (25-125)||(36906184-36906285)
chr8 (25-127)||(34272512-34272615)
chr8 (43-127)||(1942034-1942119)
chr8 (25-127)||(36102871-36102974)
chr8 (25-127)||(2474748-2474850)
chr8 (25-127)||(3404555-3404657)
chr8 (25-127)||(25033377-25033480)
chr8 (43-127)||(13865073-13865158)
chr8 (43-123)||(31297333-31297414)
chr8 (39-127)||(29612002-29612091)
chr8 (43-127)||(34349730-34349815)
chr8 (78-127)||(4734477-4734526)
chr8 (25-123)||(37659516-37659615)
chr8 (34-112)||(40985070-40985149)
chr8 (34-127)||(1839801-1839895)
chr8 (34-127)||(43733101-43733195)
chr8 (43-127)||(27085363-27085448)
chr8 (39-127)||(39193942-39194031)
chr8 (86-127)||(43007757-43007798)
chr8 (68-127)||(13227751-13227810)
chr8 (76-127)||(15108245-15108296)
chr8 (33-98)||(34304720-34304784)
chr8 (34-127)||(12506177-12506271)
chr8 (72-124)||(43239714-43239766)
chr8 (88-127)||(4873223-4873262)
chr8 (85-127)||(11226381-11226423)
chr8 (85-123)||(13258544-13258582)
chr8 (85-127)||(31149960-31150002)
chr8 (93-123)||(34148564-34148594)
chr8 (85-127)||(40999163-40999205)
chr8 (85-122)||(12595371-12595408)
chr8 (86-127)||(29584233-29584274)
chr8 (90-127)||(31598403-31598440)
chr8 (79-127)||(41866108-41866156)
[»] chr6 (18 HSPs)
chr6 (25-127)||(26574376-26574479)
chr6 (25-127)||(1029290-1029393)
chr6 (25-127)||(23095109-23095212)
chr6 (25-127)||(24734879-24734980)
chr6 (25-127)||(4909896-4909999)
chr6 (25-123)||(29241818-29241917)
chr6 (25-127)||(5825330-5825432)
chr6 (42-127)||(34914640-34914727)
chr6 (25-127)||(26481112-26481215)
chr6 (41-127)||(31345352-31345438)
chr6 (47-123)||(15615686-15615763)
chr6 (79-127)||(26713905-26713953)
chr6 (34-124)||(32222009-32222099)
chr6 (39-127)||(12779525-12779613)
chr6 (90-127)||(13120403-13120440)
chr6 (87-120)||(29054627-29054660)
chr6 (71-127)||(19477300-19477356)
chr6 (87-127)||(20820521-20820561)
[»] chr3 (53 HSPs)
chr3 (25-127)||(41961958-41962061)
chr3 (25-123)||(45555630-45555729)
chr3 (25-127)||(49682983-49683085)
chr3 (25-127)||(24242073-24242176)
chr3 (25-127)||(47714654-47714756)
chr3 (41-127)||(47789427-47789514)
chr3 (26-127)||(38526151-38526253)
chr3 (27-127)||(49860835-49860936)
chr3 (25-127)||(39499195-39499298)
chr3 (33-127)||(43237295-43237390)
chr3 (25-124)||(31178231-31178330)
chr3 (24-124)||(46312404-46312506)
chr3 (43-127)||(38592968-38593052)
chr3 (43-127)||(47434301-47434385)
chr3 (44-127)||(44412136-44412220)
chr3 (25-127)||(30131867-30131970)
chr3 (25-127)||(55439581-55439684)
chr3 (25-127)||(36796420-36796524)
chr3 (33-127)||(23163528-23163623)
chr3 (25-127)||(25428666-25428768)
chr3 (25-116)||(3043110-3043202)
chr3 (43-127)||(51686521-51686606)
chr3 (83-127)||(27055885-27055929)
chr3 (79-127)||(34306650-34306698)
chr3 (25-127)||(2420668-2420759)
chr3 (25-127)||(17642587-17642689)
chr3 (78-125)||(38515288-38515335)
chr3 (39-125)||(53888498-53888585)
chr3 (46-127)||(7661054-7661136)
chr3 (34-127)||(32858836-32858930)
chr3 (34-127)||(35283093-35283187)
chr3 (86-127)||(33982720-33982761)
chr3 (82-127)||(43007503-43007548)
chr3 (68-127)||(29623277-29623336)
chr3 (82-125)||(30121505-30121548)
chr3 (34-127)||(517613-517706)
chr3 (34-127)||(33944621-33944715)
chr3 (90-127)||(46017268-46017305)
chr3 (78-122)||(42583284-42583328)
chr3 (79-127)||(47359361-47359409)
chr3 (79-127)||(49183737-49183785)
chr3 (26-127)||(5939762-5939864)
chr3 (71-127)||(19148211-19148267)
chr3 (79-127)||(37674134-37674182)
chr3 (87-123)||(39114949-39114985)
chr3 (87-127)||(54372557-54372597)
chr3 (80-127)||(24588274-24588321)
chr3 (26-63)||(11040874-11040911)
chr3 (88-125)||(32721064-32721101)
chr3 (25-66)||(38515247-38515288)
chr3 (88-125)||(42155947-42155984)
chr3 (86-127)||(48370170-48370211)
chr3 (79-127)||(44400751-44400799)
[»] chr5 (41 HSPs)
chr5 (39-127)||(26149614-26149703)
chr5 (25-127)||(2020978-2021080)
chr5 (25-127)||(38928683-38928786)
chr5 (25-127)||(41694974-41695077)
chr5 (34-127)||(17092903-17092997)
chr5 (25-127)||(10295480-10295583)
chr5 (25-127)||(27480153-27480256)
chr5 (25-114)||(35701057-35701147)
chr5 (33-127)||(37508371-37508467)
chr5 (25-119)||(32760754-32760848)
chr5 (25-127)||(25026919-25027022)
chr5 (25-127)||(4648968-4649071)
chr5 (24-126)||(35868826-35868928)
chr5 (39-123)||(1658188-1658273)
chr5 (33-123)||(38302343-38302428)
chr5 (25-119)||(38120177-38120259)
chr5 (80-121)||(41638424-41638465)
chr5 (38-127)||(1935088-1935179)
chr5 (26-127)||(6491182-6491284)
chr5 (48-127)||(33718204-33718281)
chr5 (40-120)||(12096916-12096996)
chr5 (79-127)||(37909043-37909091)
chr5 (34-124)||(39649577-39649668)
chr5 (89-127)||(15770102-15770140)
chr5 (78-120)||(25598757-25598799)
chr5 (43-127)||(6373152-6373237)
chr5 (79-127)||(14570031-14570079)
chr5 (86-126)||(35705128-35705168)
chr5 (79-127)||(38289365-38289413)
chr5 (79-127)||(38568358-38568406)
chr5 (34-124)||(10955674-10955765)
chr5 (88-127)||(41923219-41923258)
chr5 (68-127)||(43496549-43496608)
chr5 (85-119)||(9096367-9096401)
chr5 (86-127)||(43496862-43496903)
chr5 (88-124)||(3676499-3676535)
chr5 (91-123)||(3746483-3746515)
chr5 (87-127)||(4841690-4841730)
chr5 (71-127)||(15974384-15974440)
chr5 (79-123)||(18675708-18675752)
chr5 (86-118)||(32750690-32750722)
[»] scaffold1562 (1 HSPs)
scaffold1562 (38-127)||(150-240)
[»] scaffold1158 (1 HSPs)
scaffold1158 (38-127)||(2353-2443)
[»] scaffold0028 (1 HSPs)
scaffold0028 (43-127)||(35436-35521)
[»] scaffold0717 (1 HSPs)
scaffold0717 (25-127)||(1575-1678)
[»] scaffold0952 (1 HSPs)
scaffold0952 (39-127)||(3651-3741)
[»] scaffold0248 (1 HSPs)
scaffold0248 (39-127)||(177-266)
[»] scaffold0128 (1 HSPs)
scaffold0128 (34-127)||(26385-26480)
[»] scaffold0119 (2 HSPs)
scaffold0119 (68-127)||(37162-37221)
scaffold0119 (68-112)||(30495-30539)
[»] scaffold0078 (1 HSPs)
scaffold0078 (71-115)||(4322-4366)
[»] scaffold0002 (1 HSPs)
scaffold0002 (79-127)||(90866-90914)
[»] scaffold0388 (1 HSPs)
scaffold0388 (85-124)||(7129-7168)
[»] scaffold0263 (1 HSPs)
scaffold0263 (85-127)||(12240-12282)
[»] scaffold0031 (1 HSPs)
scaffold0031 (34-127)||(93487-93581)
[»] scaffold0053 (1 HSPs)
scaffold0053 (39-127)||(29255-29344)
[»] scaffold0636 (1 HSPs)
scaffold0636 (39-101)||(8412-8473)


Alignment Details
Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 43334804 - 43334909
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43334804 aaaaatctccctcttttgggggaactcaaaaattgtattgggggagggttttgagaggttatggagggtttatatgaatttttcaaattcaatctatgtt 43334903  T
Q  124 gttacc 129  Q
    ||||||    
T  43334904 gttacc 43334909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 25960693 - 25960591
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||| ||||||||||||||||||||||||  ||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25960693 aaaatctccctcatttgggggaactcaaaaattgtatcgggggagggttttgagggcttatggagggtttatatgaatttttcaaattcaatctatgttg 25960594  T
Q  125 tta 127  Q
    |||    
T  25960593 tta 25960591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 36567362 - 36567259
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||||||||||||||||||||| ||  || |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36567362 aaaaatctccctcatttgggggaactcaaaaattgtattgggggagagttttagggggttatggagggtttatatgaatttttcaaattcaatctatgtt 36567263  T
Q  124 gtta 127  Q
    ||||    
T  36567262 gtta 36567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 18018680 - 18018579
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||    
T  18018680 aaaaatctccctcatttgggggaactcaaaaattgtattggggagggttttgaggggttatggaggg-ttatatgaaattttcaaattcaatgtatcttg 18018582  T
Q  125 tta 127  Q
    |||    
T  18018581 tta 18018579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 4041961 - 4042064
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||  ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4041961 aaaaatccccctcatttgaaggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 4042060  T
Q  124 gtta 127  Q
    ||||    
T  4042061 gtta 4042064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8991047 - 8990944
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||  ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  8991047 aaaaatctctctcatttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatatttcaaattcaatctatgtt 8990948  T
Q  124 gtta 127  Q
    ||||    
T  8990947 gtta 8990944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 18826302 - 18826207
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18826302 ccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatttatgttgtta 18826207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 40357454 - 40357557
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  40357454 aaaaatccccctcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggaaggtttatatgaatttttcaaatccaatctatgtt 40357553  T
Q  124 gtta 127  Q
    ||||    
T  40357554 gtta 40357557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 18780395 - 18780484
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18780395 tttgggggaactcaaaaattgtattgggagagggttttggggggttatggaggatttatatgaatttttcaaattcaatctatgttgtta 18780484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 8411006 - 8410911
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggca-gggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||||||||| ||   |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8411006 ccctcatttgggggaactcaaaaattgtattgggggtgggttttggggggttatggaaggtttatatgaatttttcaaattcaatctatgttgtta 8410911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8555860 - 8555757
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||||||||| |||||||||||| ||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||    
T  8555860 aaaaatccccctcatttgggggaactaaaaaattgtattgggggagggttttggggggttatagagggtttatatgaatttttcaaattcaatctatatt 8555761  T
Q  124 gtta 127  Q
    ||||    
T  8555760 gtta 8555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 3039030 - 3038928
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||   ||||||  || |||||||||||||||||| |||||||||||||||||||||||||    
T  3039030 aaaaatccccctcatttgggggaactcaaaaattgtattgggggaggtttttgggagttatggagggtttatatcaatttttcaaattcaatctatgttg 3038931  T
Q  125 tta 127  Q
    |||    
T  3038930 tta 3038928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 12964056 - 12963956
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttg--gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    |||||||||| || ||||||||||||| |||||||||||||  | ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  12964056 aaaaatctccatcatttgggggaactccaaaattgtatttgcgggagggttttggggggttacggagggtttatatgaatttttcaaatccaatctatgt 12963957  T
Q  123 t 123  Q
    |    
T  12963956 t 12963956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 13766005 - 13765920
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||| ||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13766005 ggggaactcaaaaattgtattgggggagggttttggggggttgtggagggtttatatgaatttttcaaattcaatctatgttgtta 13765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 3119917 - 3119833
Alignment:
Q  43 ggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||| || ||| ||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  3119917 ggggaactcaaaaattgtattagggaggattttgggggcttatagagggtttatatgaatttttcaaattcaatctatgttgtta 3119833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 1725907 - 1726009
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| | ||||||||||||||||||||||| ||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||    
T  1725907 aaaaatccccctcatctgggggaactcaaaaattgtattgggggagggttttg-ggggttatagagggtttatatgaatttttcaaattcaatctatatt 1726005  T
Q  124 gtta 127  Q
    ||||    
T  1726006 gtta 1726009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 10165420 - 10165512
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtt 126  Q
    ||||| |||||||||||| |||||||||||| ||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10165420 ccctcatttgggggaactaaaaaattgtattgggggagggttttg--gggttatggagggtttatatgaatttttcaaattcaatctatgttgtt 10165512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 38293886 - 38293988
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||  ||||||||  | |||||||||||||||||||||||||| |||||||||||||||||    
T  38293886 aaaaatctccctcatttgggg-aactcaaaaattgtattgggggagggtttttggaggttatggagggtttatatgaattttccaaattcaatctatgtt 38293984  T
Q  124 gtta 127  Q
    ||||    
T  38293985 gtta 38293988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 44137152 - 44137231
Alignment:
Q  45 ggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44137152 ggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 44137231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 38023529 - 38023428
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||| ||| ||||||| ||||||||||||||||| || ||||||||| |||||||||||| |||||||| |||||||||||| ||||| ||||||    
T  38023529 aaaaatctctctcatttgggg-aactcaaaaattgtattggggagggttttggggggttatggagagtttatataaatttttcaaatccaatcaatgttg 38023431  T
Q  125 tta 127  Q
    |||    
T  38023430 tta 38023428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 14008398 - 14008310
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||| ||||  |  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14008398 tttgggggaactcaaaaattatattgagagagggttttg-ggggttatggagggtttatatgattttttcaaattcaatctatgttgtta 14008310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 32243472 - 32243568
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatg 121  Q
    |||||||  |||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  32243472 aaaaatcatcctcatttgggggaactcaaaaattgtattgggggagggttttg-ggggttatgaagggtttatatcaatttttcaaattcaatctatg 32243568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 19382875 - 19382977
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||||| ||||| ||  ||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||    
T  19382875 aaaaatccccctcatttgggg-aactcaaaaatcgtattgggggagggttttggggggttatggaggatttatatgaaattttcaaattctatctatgtt 19382973  T
Q  124 gtta 127  Q
    ||||    
T  19382974 gtta 19382977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 7184137 - 7184218
Alignment:
Q  43 ggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  7184137 ggggaactcaaaaattatattaggggagggtttt-aggggttatggagggtttatatgaatttttcaaattcactctatgttg 7184218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 26905810 - 26905904
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| |||||||||||||| ||||||||||||||    
T  26905810 cctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaatttttcaaatttaatctatgttgtta 26905904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 31550292 - 31550245
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31550292 ggggttatggagggtttatatgaatttttcaaatccaatctatgttgt 31550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 13018553 - 13018459
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| ||||| |||||| ||  ||||||||| |||||| ||||||||| ||| |||||||||||||| ||||||||||||||    
T  13018553 cctcatttggaggaactaaaaaaatgtattgggggagggttttggggggttttggagggttaataagaatttttcaaatttaatctatgttgtta 13018459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 31899382 - 31899337
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31899382 ttatggagggtttatatgaatttttcaaattcaatctatattgtta 31899337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 34757611 - 34757706
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttat-ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||| |||||| | |||||| ||||||||||| ||||||||||||| |||||||||    
T  34757611 cctcatttggaggaactaaaaaattgtattggaggagggttttggggggtttttggagggcttatatgaattcttcaaattcaatcaatgttgtta 34757706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 11515050 - 11515144
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  11515050 cctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 11515144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 13767480 - 13767518
Alignment:
Q  89 gggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13767480 gggtttatatgaatttttcaaattcaatctatgttgtta 13767518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 11522246 - 11522161
Alignment:
Q  43 ggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||| ||||||| | | ||||||||| ||||||  |||||||||||||||||| |||||||| ||| ||||||||||    
T  11522246 ggggaactaaaaagttgtattggaggagggttttggggggtttgggagggtttatatgaattcttcaaatttaatatatgttgtta 11522161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 44020390 - 44020439
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||||    
T  44020390 ggggttatggagagtttatataaacttttcaaattcaatctatgttgtta 44020439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 725953 - 726041
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaatt 112  Q
    ||||||||||||| ||||| |||||||||||||| ||||  || ||||||||| ||||| |   | |||||||||||||||||||||||    
T  725953 aaaaatctccctcatttggaggaactcaaaaattttattgggggagggttttggggggtaacaaaaggtttatatgaatttttcaaatt 726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 7786507 - 7786471
Alignment:
Q  91 gtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||||||    
T  7786507 gtttatatgaatttttcaaattcaatctatgttgtta 7786471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 28539449 - 28539407
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  28539449 tggagggtttatatgaattcttcaaatttaatctatgttgtta 28539407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 37194273 - 37194367
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||  |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  37194273 cctcatttggaggaactaaaaaattgtattggaggagggtttttgggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 37194367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 39205031 - 39205117
Alignment:
Q  42 gggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||| |||||||||||| | | ||| ||||  ||| || ||||||||||||||||||| || ||||| ||||||||||||||    
T  39205031 gggggaactaaaaaattgtattggaggaggattttaggggtttttggagggtttatatgaattcttgaaatttaatctatgttgtta 39205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 43572619 - 43572525
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | || |||||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  43572619 cctcatttggaggaactaaaaaattgtattggaggagagttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 43572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 16625826 - 16625785
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  16625826 ggagggtttatatgaattcttcaaatttaatctatgttgtta 16625785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 21626129 - 21626225
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgagg--ggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||| |||| ||||||| | | ||||||||| ||  |||| ||||||||| ||| ||||| |||||||| ||||||||||||||    
T  21626129 cctcatttgggggaactaaaaagttgtattggagaagggttttgtggagggttttggagggttaataagaattcttcaaatttaatctatgttgtta 21626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 35550195 - 35550139
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||| ||| || ||||||||||||||||||| |||||||| |||||| |||||||    
T  35550195 gttttgtgggattttggagggtttatatgaattcttcaaatttaatctacgttgtta 35550139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 26599324 - 26599245
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaatt 112  Q
    |||| |||||||||||||| |||||||||| | | ||||||||| | |||| ||||||||||| |||| || ||||||||    
T  26599324 cctcatttgggggaactcacaaattgtattggaggagggttttgggaggttttggagggtttacatgagttcttcaaatt 26599245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 6128869 - 6128835
Alignment:
Q  93 ttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||| ||||||||||||||    
T  6128869 ttatatgaatttttcaaatttaatctatgttgtta 6128835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 21834947 - 21835041
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||| |||||||| |||| ||||||| | | ||||||||| |  ||| |||||||||||||||||||  ||||||| ||| ||||||||||    
T  21834947 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcagttttggagggtttatatgaattaatcaaatttaatatatgttgtta 21835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 40212009 - 40212103
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| |   ||||||||| |||||| ||||||||| ||| ||||| | |||||| ||| ||||||||||    
T  40212009 cctcatttggaggaactaaaaaattgtattggatgagggttttggggggttttggagggttaataagaattctacaaatttaatttatgttgtta 40212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 1270742 - 1270698
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaatt 112  Q
    ||||||||||| | || ||||||||||||||||||| ||||||||    
T  1270742 agggttttgagagattttggagggtttatatgaattcttcaaatt 1270698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 1802086 - 1802046
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||  | ||||||||||||||||||||    
T  1802086 gagggtttatatgaattccttaaattcaatctatgttgtta 1802046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 13767243 - 13767303
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgttac 128  Q
    ||||||||||| |||| || ||| |||||||||||| |||||||| ||| ||| |||||||    
T  13767243 agggttttgagaggttttgaaggatttatatgaattcttcaaattaaatttatattgttac 13767303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 30312444 - 30312400
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||| ||| |||||||||||| |||||||||| |||||||||||    
T  30312444 gggttttggggggtttatatgattttttcaaatccaatctatgtt 30312400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 31082857 - 31082905
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||| ||||||||||||||| |||||||| ||| ||||||||||    
T  31082857 gggttttggggggtttatatgaattcttcaaatttaatttatgttgtta 31082905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 896579 - 896476
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||||| || ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  896579 aaaaatctccttcatttgggggaactcaaaaattgtattgtgggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 896480  T
Q  124 gtta 127  Q
    ||||    
T  896479 gtta 896476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 23871547 - 23871444
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||||||||||||||||||||| | | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23871547 aaaaatctccctcatttgggggaactcaaaaattgtattggcggagggttttggggggttacggagggtttatatgaatttttcaaattcaatctatgtt 23871448  T
Q  124 gtta 127  Q
    ||||    
T  23871447 gtta 23871444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 39889742 - 39889639
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||  ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39889742 aaaaatctccctaatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 39889643  T
Q  124 gtta 127  Q
    ||||    
T  39889642 gtta 39889639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 42488711 - 42488608
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||||||||||||||||||||  ||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  42488711 aaaaatctccctcatttgggggaactcaaaaattgtatcgggggagggttttgtggggttattgagggtttatatgaatttttcaaattcaatctatgtt 42488612  T
Q  124 gtta 127  Q
    ||||    
T  42488611 gtta 42488608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 13255341 - 13255444
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||| | ||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  13255341 aaaaatccccctcatttgggggaactcaaaaattgtagtgggagagggttttggggggttatagagggtttatatgaatttttcaaattcaatctatgtt 13255440  T
Q  124 gtta 127  Q
    ||||    
T  13255441 gtta 13255444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 17688337 - 17688439
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||||||||||||||||||||| ||  || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  17688337 aaaaatctccctcatttgggggaactcaaaaattgtattgggggagagttttg-ggggttatggagggtttatatgaatttttcaaattcaatatatgtt 17688435  T
Q  124 gtta 127  Q
    ||||    
T  17688436 gtta 17688439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 27499981 - 27500084
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||  ||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  27499981 aaaaatccccctcatttgggggaactcaaaaattgtatcgggggagggttttggggggttatggaggatttatatgaatttttcaaattcaatctatgtt 27500080  T
Q  124 gtta 127  Q
    ||||    
T  27500081 gtta 27500084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 47905765 - 47905670
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||||||||| ||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47905765 ccctcatttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 47905670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 7963971 - 7964074
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||  ||||||||| ||||||||| || |||||||||||||||||||||||||||||||||    
T  7963971 aaaaatccccctcatttggaggaactcaaaaattgtattgggggagggttttggggggttatgaagcgtttatatgaatttttcaaattcaatctatgtt 7964070  T
Q  124 gtta 127  Q
    ||||    
T  7964071 gtta 7964074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 33991538 - 33991641
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||||    
T  33991538 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaattttttaaatcaaatctatgtt 33991637  T
Q  124 gtta 127  Q
    ||||    
T  33991638 gtta 33991641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 47206507 - 47206405
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47206507 aaaaatccccctcatttgggggaactcaaaaattgtattgggggaagattttg-ggggttatggagggtttatatgaatttttcaaattcaatctatgtt 47206409  T
Q  124 gtta 127  Q
    ||||    
T  47206408 gtta 47206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 2926018 - 2925916
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| ||||| ||||||||||||||||||||||||| || |    ||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  2926018 aaaaatccccctcatttgggggaactcaaaaattgtattggggaaatgttttaggggttatggagggtttatatgaatttttcaaatttaatctatgttg 2925919  T
Q  125 tta 127  Q
    |||    
T  2925918 tta 2925916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 42162137 - 42162034
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||| ||||||||| ||||| || | | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42162137 aaaaatccccctcatttgggagaactcaaatattgtgttggaggaggattttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 42162038  T
Q  124 gtta 127  Q
    ||||    
T  42162037 gtta 42162034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 12293807 - 12293912
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggtttt-gaggggttatggagggtttatatgaa-tttttcaaattcaatctatg 121  Q
    ||||||| ||||| |||||||||||||||||||||||||  || |||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||    
T  12293807 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttgggggggttatggagggtttatatgaattttttcaaattcaatatatg 12293906  T
Q  122 ttgtta 127  Q
    ||||||    
T  12293907 ttgtta 12293912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 1523592 - 1523695
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttgg-cagggttttgaggggttatggagggtttatatgaa-tttttcaaattcaatctatgt 122  Q
    ||||||| ||||| |||||||||||||||||||| |||| ||  ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  1523592 aaaaatccccctcgtttgggggaactcaaaaattatattgggagagggttttg-ggggttatggagggtttatttgaattttttcaaattcaatctatgt 1523690  T
Q  123 tgtta 127  Q
    |||||    
T  1523691 tgtta 1523695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 1688300 - 1688201
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||||||||||| ||  || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1688300 aaaaatccccctcatttgggg-aactcaaaaattgtattgggggagagttttggggggttatggagggtttatatgaatttttcaaattcaatttatgtt 1688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8156422 - 8156318
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggtttt-gaggggttatggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    ||||||| ||||| |||||||||||| ||||||||||||  || || ||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  8156422 aaaaatccccctcatttgggggaacttaaaaattgtattgggggagagttttgggggggttatggagggtttatatcaatttttcaaattcaatctatgt 8156323  T
Q  123 tgtta 127  Q
    |||||    
T  8156322 tgtta 8156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 14153109 - 14153211
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||| ||| ||||||||||||||||| ||  |||||||||  | |||||||||||||||||| ||||||||||||||||||||||||    
T  14153109 aaaaatctccctcatttaggg-aactcaaaaattgtattggggtagggttttggagagttatggagggtttatattaatttttcaaattcaatctatgtt 14153207  T
Q  124 gtta 127  Q
    ||||    
T  14153208 gtta 14153211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 7401611 - 7401517
Alignment:
Q  25 aaaaatctccctcttttggggg-aactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatc 117  Q
    ||||||||||||| | |||||| ||||||||||||||||| ||  ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  7401611 aaaaatctccctcatatggggggaactcaaaaattgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatc 7401517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 13061480 - 13061378
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||| ||||| ||||||||||||||| ||  ||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  13061480 aaaaatccccctcatttaggggatctcaaaaattgtattgggggagggttttt-ggggttatggatggtttgtatgaatttttcaaattcaatctatgtt 13061382  T
Q  124 gtta 127  Q
    ||||    
T  13061381 gtta 13061378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 26757239 - 26757140
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||||||||||| ||  ||| ||||| ||||||||||||||||||||  || |||||||||||||||||||||    
T  26757239 aaaaatccccctcatttggggtaactcaaaaattgtattgggggaggtttttggggggttatggagggtttatactaagttttcaaattcaatctatgtt 26757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 30538833 - 30538730
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||| ||| ||||||||||||||||||||||||   || ||||||||   || |||||||||||||||||||| |||||||||||||| ||||||    
T  30538833 aaaaatctctctcatttgggggaactcaaaaattgtatcgagggagggtttttgcggattatggagggtttatatgaaattttcaaattcaatttatgtt 30538734  T
Q  124 gtta 127  Q
    ||||    
T  30538733 gtta 30538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 32299153 - 32299202
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32299153 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 32299202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 40707280 - 40707189
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||  |||       |||||||||||||||||||||||||||||||||||||||||||||    
T  40707280 aaaaatccctctcatttgggggaactcaaaaattgtattgggggggg-------gggttatggagggtttatatgaatttttcaaattcaatctatgtt 40707189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 36886874 - 36886969
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||| |||||||| |||||||| ||| | | ||||||||  |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36886874 ccctcattttggggaactaaaaaattgcattggaggagggtttttgggggttttggagggtttatatgaatttttcaaatttaatctatgttgtta 36886969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 39508768 - 39508870
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||| | ||| |||||||||| | |||||||||||| ||  ||||||||  |||||| ||||| |||||||||||||||||||||||||||||| |||    
T  39508768 aaaatccctctcatttgggggaattaaaaaattgtattgggggagggttttagggggttttggagagtttatatgaatttttcaaattcaatctattttg 39508867  T
Q  125 tta 127  Q
    |||    
T  39508868 tta 39508870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 938281 - 938232
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  938281 ggggttatggagggtttatatgattttttcaaattcaatctatgttgtta 938232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 2175385 - 2175434
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2175385 ggggttatggagggtttgtatgaatttttcaaattcaatctatgttgtta 2175434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 43571995 - 43571946
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43571995 ggggttatggaggatttatatgaatttttcaaattcaatctatgttgtta 43571946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 15463862 - 15463910
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15463862 gggttatggagggtttatatgaatttttcaaattcaatctattttgtta 15463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 38794967 - 38795071
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttat-ggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    ||||||| ||||| ||||||||||||  |||||| |||| ||  ||||||||| | |||| | |||||||||||||||||||||||| ||||||||||||    
T  38794967 aaaaatccccctcatttgggggaacttcaaaattttattgggggagggttttgggaggtttttggagggtttatatgaatttttcaatttcaatctatgt 38795066  T
Q  123 tgtta 127  Q
    |||||    
T  38795067 tgtta 38795071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 11017614 - 11017686
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaat 116  Q
    ||||||||||||||||||||| ||  |||||||||  |||||||| |||||||||||||||||||||||||||||    
T  11017614 ggggaactcaaaaattgtattaggggagggttttg--gggttatgaagggtttatatgaatttttcaaattcaat 11017686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 36269749 - 36269840
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||| |||||||||||| |||||||||||| | | || |||| | |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  36269749 cctcatttgggggaactaaaaaattgtattggaggagagtttcggggggttttggaggatttatatgaattcttcaaattcaatctatgttg 36269840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 50402783 - 50402841
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  50402783 agggttttg-ggggttatggaaggtttatatgaatttttcaaatccaatctatgttgtta 50402841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 50247611 - 50247689
Alignment:
Q  44 gggaactcaaaaattgtatttggc-agggttttgaggg-gttatggagggtttatatgaatttttcaaattcaatctat 120  Q
    ||||||||||| |||||||| ||  ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  50247611 gggaactcaaagattgtattgggggagggtttcgggggagttatggagggtttatatgaatttttcaaattcaatctat 50247689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 26940648 - 26940693
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  26940648 ttatggagggtttatatgaatttttcaaattcaacctatgttgtta 26940693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 51303251 - 51303174
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaa 110  Q
    |||| ||||| ||||||||||||||| ||||| | |||||||||||||||| |||||| |||||||||||| ||||||    
T  51303251 cctcatttggtggaactcaaaaattgcatttgaggagggttttgaggggttttggaggatttatatgaattcttcaaa 51303174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 17675248 - 17675296
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  17675248 gggttatggaggatttatatgaatttttcaaattcaatctatgtggtta 17675296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 45565127 - 45565230
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttt--tcaaattcaatctatg 121  Q
    ||||||||||||| |||| || |||| |||||||||||| ||  ||||||||| |||||||||||  |||||||||| ||||  ||||||||||||||||    
T  45565127 aaaaatctccctcatttgagg-aactaaaaaattgtattgggggagggttttg-ggggttatggaatgtttatatgattttttttcaaattcaatctatg 45565224  T
Q  122 ttgtta 127  Q
    ||||||    
T  45565225 ttgtta 45565230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 2909129 - 2909218
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  2909129 tttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 2909218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 36325774 - 36325815
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  36325774 ggagggtttatatgaattcttcaaattcaatctatgttgtta 36325815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 51246647 - 51246555
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||| ||| ||||||||||||||||||||||||| | | |||||||||||||           ||||||||||||||||||||||||||||| ||    
T  51246647 aaaaatctctctcatttgggggaactcaaaaattgtattggaggagggttttgaggg-----------tttatatgaatttttcaaattcaatctatttt 51246559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 28748251 - 28748290
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  28748251 agggtttatatgaattttttaaattcaatctatgttgtta 28748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 38795446 - 38795387
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||| |||||| |||| |||||||||||||| |||||||| ||||| ||||||||    
T  38795446 agggttttggggggttttggaaggtttatatgaattcttcaaatttaatctgtgttgtta 38795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 33854862 - 33854820
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  33854862 tggagcgtttatatgaatttttcaaatttaatctatgttgtta 33854820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 33926060 - 33926102
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  33926060 tggagcgtttatatgaatttttcaaatttaatctatgttgtta 33926102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 46001572 - 46001666
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||||| | || |||||| |||||| || |||||| ||| ||||| |||||||| ||| ||||||||||    
T  46001572 cctcatttggaggaactaaaaaattgtatttgaggagagttttggggggttttgtagggttaataagaattcttcaaatttaatttatgttgtta 46001666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 20712238 - 20712197
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  20712238 ggagggtttatataaattcttcaaattcaatctatgttgtta 20712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 41817369 - 41817280
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||| | | ||||||||| || ||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  41817369 tttggaggaactaaaaaattgtattggaggagggttttggggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 41817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 43036345 - 43036304
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  43036345 ggagggtttatatgaattcttcaaatttaatctatgttgtta 43036304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 39886961 - 39886905
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||| ||| || ||||| ||||||||||||| |||||||| ||||||||||||||    
T  39886961 gttttgggggtttttggagagtttatatgaattcttcaaatttaatctatgttgtta 39886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 50476588 - 50476628
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  50476588 gagggtttatatgaattttttaatttcaatctatgttgtta 50476628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 52073487 - 52073447
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatcta 119  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  52073487 gggttttggagggtttagatgaatttttcaaattcaatcta 52073447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 6015472 - 6015531
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||||   ||||||||||||||||| |||||||| ||| ||||||||||    
T  6015472 agggttttaaggggtttgagagggtttatatgaattcttcaaatttaatatatgttgtta 6015531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32299091 - 32299129
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt 63  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  32299091 aaaaatccccctcatttgggggaactcaaaaattgtatt 32299129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 37649691 - 37649597
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||  || ||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  37649691 cctcatttggaggaactaaaaaattgtattggaggagggtttttgggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 37649597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 47742605 - 47742647
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||| | | ||||||||||    
T  47742605 tggagggtttatatgaatttttcaaatttattatatgttgtta 47742647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 17760515 - 17760466
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||| ||||||||| ||| ||||| |||||||| ||||||||||||||    
T  17760515 ggggttttggagggttaataagaattcttcaaatttaatctatgttgtta 17760466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 19652365 - 19652276
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||| |||||||| | | |  ||||||||||||| || ||| |||||||||||| |||| ||| ||||||| ||||||    
T  19652365 tttggaggaactcaaagattgtattggagaaaagttttgaggggttctgaaggatttatatgaattcttcatatttaatctattttgtta 19652276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 27255251 - 27255296
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  27255251 gggttttggagggttaataagaatttttcaaatttaatctatgttg 27255296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 48327330 - 48327375
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| |||  ||||||||||||| |||||||||    
T  48327330 ttatggagggtttatataaatccttcaaattcaatccatgttgtta 48327375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 7915535 - 7915603
Alignment:
Q  50 tcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatc 117  Q
    |||||||||||||| | | ||||||||| | |||| ||||||||||| ||||||| |||||||| ||||    
T  7915535 tcaaaaattgtattggaggagggttttgggaggttctggagggtttacatgaattcttcaaatttaatc 7915603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 23555000 - 23554960
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||||||||| ||||||| |||||||| |||||||||    
T  23555000 tggagggtttatataaattttttaaattcaacctatgttgt 23554960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 32287621 - 32287677
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||||||| ||||| |||||||| | || |||||||| ||| |||||||    
T  32287621 agggttttgaggggttttggagagtttatatcatttcttcaaatttaatatatgttg 32287677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 33324683 - 33324723
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| |||||||| |||| |||||||||    
T  33324683 gagggtttatatgaattcttcaaatttaatcaatgttgtta 33324723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 50226090 - 50226130
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| ||| |||| ||||||||||||||    
T  50226090 gagggtttatatgaattcttctaatttaatctatgttgtta 50226130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 50587086 - 50587134
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| || |||||||||||||||| |||||||| || |||||||||||    
T  50587086 gggttttgaagggtttatatgaattcttcaaatttaaactatgttgtta 50587134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 23620877 - 23620774
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  23620877 aaaaatccccctcatttgggggaactcaaaaattgtatttggggagggttttggggggttatggatggtttatatgaatttttcaaattcaatctatgtt 23620778  T
Q  124 gtta 127  Q
    ||||    
T  23620777 gtta 23620774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 3658595 - 3658492
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  3658595 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttagggggttatggagggattatatgaatttttcaaattcaatctatgtt 3658496  T
Q  124 gtta 127  Q
    ||||    
T  3658495 gtta 3658492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 33406716 - 33406613
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||| |||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  33406716 aaaaatccccctcatttgagggaactcaaaaattgtattgggagagggttttggggggttatggagggtttatatcaatttttcaaattcaatctatgtt 33406617  T
Q  124 gtta 127  Q
    ||||    
T  33406616 gtta 33406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 3571843 - 3571740
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||||||||||||||||||||||  || ||||||||| |||||||| ||| ||||||||||||||||||||| |||||||||||    
T  3571843 aaaaatccccctcatttgggggaactcaaaaattgtattgcgggagggttttggggggttatagagtgtttatatgaatttttcaaatccaatctatgtt 3571744  T
Q  124 gtta 127  Q
    ||||    
T  3571743 gtta 3571740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 28437626 - 28437523
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| | |  || ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  28437626 aaaaatccccctcatttgggggaactcaaaaattgtattggaggtggattttggggggttatggagggtttatatcaatttttcaaattcaatctatgtt 28437527  T
Q  124 gtta 127  Q
    ||||    
T  28437526 gtta 28437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 41002327 - 41002232
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||||||||||||| |||| ||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41002327 ccctcatttgggggaactcaaaaattatattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 41002232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 42620418 - 42620333
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42620418 ggggaactcaaaaattgtattgggggaggattttgaggggttatggagggtttatatgaatttttcaaattcaatctatattgtta 42620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 36747296 - 36747395
Alignment:
Q  27 aaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtt 126  Q
    ||||| ||||| |||||| || ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  36747296 aaatccccctcatttgggtgatctcaaaaattgtattggggagg-ttttggggggttatggaaggtttatatgaatttttcaaattcaatctatattgtt 36747394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 33810288 - 33810193
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||    
T  33810288 ccctcatttgggagaactcaaaaattgtattgggggagggttttgaggggttatggaggatttatataaatttttcaaattctatatatgttgtta 33810193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 47276086 - 47275987
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||||||||||||||||| |||| ||  ||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  47276086 aaaaatccccctcatttgggggaactcaaaaattatattgggggaggattttggggggttatggaaggtttatatgaatttttcaaatccaatctatgtt 47275987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 5968127 - 5968034
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| ||||| |||||||||||||||||||||||||    ||||    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5968127 aaaaatccccctcatttgggggaactcaaaaattgtatt----aggg----gaggg-ttatggagggtttatatgaatttttcaaattcaatctatgttg 5968037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 33113722 - 33113620
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||  |||||||||   ||||||||||||||||||||||| |||||||| |||| ||||||    
T  33113722 aaaaatccccctcatttgggg-aactcaaaaattgtatttggggagggttttggacggttatggagggtttatatgaatatttcaaatccaatttatgtt 33113624  T
Q  124 gtta 127  Q
    ||||    
T  33113623 gtta 33113620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 43778640 - 43778556
Alignment:
Q  45 ggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaat-ttttcaaattcaatctatgttgtta 127  Q
    |||||| |||||||||||| ||  ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  43778640 ggaactaaaaaattgtattgggggagggttttggggggttatggagggtttatatgaattttttcaaattcaatctatattgtta 43778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 34652135 - 34652035
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||||||||||||||||||||||  || ||||||||  |||||| ||| ||| |||||| ||||||||||||||||||||| ||    
T  34652135 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggtttt--ggggttgtggggggcttatatcaatttttcaaattcaatctatttt 34652038  T
Q  124 gtt 126  Q
    |||    
T  34652037 gtt 34652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 43188910 - 43188957
Alignment:
Q  80 ggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43188910 ggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 43188957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 16568515 - 16568597
Alignment:
Q  43 ggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||| |||||||||||| ||  | ||||||||||||| | |||| |||||||||||||||||||||||| ||| |||||    
T  16568515 ggggaactaaaaaattgtattggggggagttttgaggggttttagaggatttatatgaatttttcaaattcaacctacgttgt 16568597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 16597147 - 16597065
Alignment:
Q  43 ggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||| |||||||||||| ||  | ||||||||||||| | |||| |||||||||||||||||||||||| ||| |||||    
T  16597147 ggggaactaaaaaattgtattggggggagttttgaggggttttagaggatttatatgaatttttcaaattcaacctacgttgt 16597065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 38235849 - 38235894
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  38235849 ttatggagggtttatatgaatttttcaaattcaatctatattgtta 38235894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 43665191 - 43665150
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43665191 ggagggtttatatgaatttttcaaattcaatctatgttgtta 43665150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 7667248 - 7667150
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||| ||||   |||||||||||||| ||  | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  7667248 aaaaatccccctcatttagggggcttcaaaaattgtattgggggacggttttg-ggggttatggaaggtttatatgaatttttcaaatccaatctatgtt 7667150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 42220082 - 42220136
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtt 126  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  42220082 gttttggggggtt-tggagggtttatatgaatttttcaaattcaatctatattgtt 42220136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 46449172 - 46449268
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||| ||| |||||||||||||||||  || ||||||||| || ||||  || ||||||||||||||||||||||||||||||||||    
T  46449172 aaaaatctccctcatttaggg-aactcaaaaattgtattggggaagggttttg-ggagtta-cgaaggtttatatgaatttttcaaattcaatctatgtt 46449268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 2826322 - 2826228
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||| |||||||||||| | | ||||||||| ||| || |||| | |||||||||||| |||||||| |||| |||||||||    
T  2826322 cctcatttgggggaactaaaaaattgtattggaggagggttttgggggattttggaagctttatatgaattcttcaaatttaatcaatgttgtta 2826228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 39670885 - 39670848
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39670885 ggagggtttatatgaatttttcaaattcaatctatgtt 39670848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 38505373 - 38505325
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  38505373 gggttttggagggtttatatgaattcttcaaatttaatctatgttgtta 38505325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 33872152 - 33872101
Alignment:
Q  76 gaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||||||||    
T  33872152 gagggtttttggagggtttatatgaattcttcaaatttaatctatgttgtta 33872101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 42112999 - 42112940
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||| | || |||||||||    
T  42112999 agggttttggggggtttaggagggtttatatgaatttttcaaatttattcaatgttgtta 42112940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 4788068 - 4787984
Alignment:
Q  43 ggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||||||||| | | ||||||||||||| ||  |||||||||| ||||||||||||| || ||| ||||||||||    
T  4788068 ggggaactaaaaaattgtattggagtagggttttgagggatttgggagggttta-atgaatttttcaattttaatatatgttgtta 4787984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 16805637 - 16805548
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| ||||| || ||||| ||| ||||||||||    
T  16805637 tttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttaaaatttaatttatgttgtta 16805548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 19644343 - 19644392
Alignment:
Q  79 gggttatggagggtttatatgaatttt-tcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  19644343 gggttttggaggatttatatgaattttttcaaattcaatctatgttgtta 19644392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 35264914 - 35264873
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  35264914 ggagggtttatatgaatttttcaaatttaatttatgttgtta 35264873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 25335367 - 25335407
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  25335367 gagggtttatatgaatttttcaaatttaatctattttgtta 25335407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 43348268 - 43348220
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||| ||||||||| |||||||| ||||||||||||||    
T  43348268 gggttttggagggttaatatgaattcttcaaatttaatctatgttgtta 43348220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 45066787 - 45066823
Alignment:
Q  91 gtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45066787 gtttatatgaattcttcaaattcaatctatgttgtta 45066823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 6746644 - 6746560
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||||||||||||||||||||| |  ||||      |||||| ||||||||||||||||||| |||||||| || |||||||||||    
T  6746644 cctcatttgggggaactcaaaaattgtattgg--aggg------ggggtt-tggagggtttatatgaattcttcaaatttaacctatgttgtta 6746560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 10591939 - 10591884
Alignment:
Q  73 tttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgttac 128  Q
    ||||||||| | | ||| ||||||||||||| |||||||| |||||||||||||||    
T  10591939 tttgagggggttttgagagtttatatgaattcttcaaatttaatctatgttgttac 10591884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 44720131 - 44720181
Alignment:
Q  79 gggttatggagggtttatatgaa--tttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||  ||||||| ||||||||||| ||||||    
T  44720131 gggttatggagggtttatatgaatttttttcatattcaatctatattgtta 44720181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 31891334 - 31891376
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  31891334 tggagagtttatatgaattcttcaaatttaatctatgttgtta 31891376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 42471488 - 42471530
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||    
T  42471488 tggagtgtttatatgaattttttaaattcaatctttgttgtta 42471530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 17818345 - 17818386
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||| ||||||| |||||||| ||||||||||||||    
T  17818345 ggagggtttagatgaattcttcaaatttaatctatgttgtta 17818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 1277998 - 1278038
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| |||||||| ||| ||||||||||    
T  1277998 gagggtttatatgaattcttcaaatttaatatatgttgtta 1278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 30081032 - 30081072
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| |||| ||| ||||||||||||||    
T  30081032 gagggtttatatgaattcttcagatttaatctatgttgtta 30081072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 30183894 - 30183934
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||| ||| |||||||| |||||||||||||||||||||    
T  30183894 tggaggctttgtatgaattcttcaaattcaatctatgttgt 30183934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 41715873 - 41715837
Alignment:
Q  91 gtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  41715873 gtttatatggatttttcaaattccatctatgttgtta 41715837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 46442749 - 46442809
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttt-tcaaattcaatctatgttgtta 127  Q
    |||| |||||||| || || ||||||||||| |||||| ||||||| ||||||||||||||    
T  46442749 aggggtttgagggtttttgaagggtttatataaattttttcaaatttaatctatgttgtta 46442809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 7182275 - 7182172
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7182275 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 7182176  T
Q  124 gtta 127  Q
    ||||    
T  7182175 gtta 7182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 13269950 - 13270053
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| |||||| |||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  13269950 aaaaatctccctcatttgggagaactcaaaaattgtattgtgggagggttttggggggttatggggggtttatatgaatttttcaaattcaatctatgtt 13270049  T
Q  124 gtta 127  Q
    ||||    
T  13270050 gtta 13270053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 20533924 - 20534027
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  20533924 aaaaatctccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatgtt 20534023  T
Q  124 gtta 127  Q
    ||||    
T  20534024 gtta 20534027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 41844432 - 41844535
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||    
T  41844432 aaaaatctccctcatttgggggaactcaaaaattgtattaggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatctt 41844531  T
Q  124 gtta 127  Q
    ||||    
T  41844532 gtta 41844535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 56504551 - 56504452
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||||    
T  56504551 aaaatctccctcatttgggggaactcaaaaattgtattggggagggttttgggaggtttcggagggtttatatgaatttttcaaattcaatctatgttgt 56504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 41363896 - 41363793
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| | ||||||||||||||||||||||| ||  ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  41363896 aaaaatccccctcatgtgggggaactcaaaaattgtattgggggagggttttggggggttatggagggattatatgaatttttcaaattcaatctatgtt 41363797  T
Q  124 gtta 127  Q
    ||||    
T  41363796 gtta 41363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 17873194 - 17873296
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| ||||  ||||||||||||||||||||||||| || ||||||||| |||||||| || ||||||||||||||||||||||||||| |||||||    
T  17873194 aaaaatcccccttatttgggggaactcaaaaattgtattggggagggttttggggggttattgaaggtttatatgaatttttcaaattcaatttatgttg 17873293  T
Q  125 tta 127  Q
    |||    
T  17873294 tta 17873296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 52594708 - 52594607
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||| ||| ||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||    
T  52594708 aaaaatctctctcatttgggggaactcaaaaattgtattggggagggttttg-gaggttatggagggtttatatgaatttttcaaatctaatctatgttg 52594610  T
Q  125 tta 127  Q
    |||    
T  52594609 tta 52594607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 904194 - 904290
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctat 120  Q
    ||||||| ||||| |||||||||||||||||||||||||  || ||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  904194 aaaaatccccctcatttgggggaactcaaaaattgtattgagggagggttttggggggttatggagagtttatatgaatttttcaaattcaatctat 904290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 31530016 - 31530119
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||  |||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  31530016 aaaaatcctcctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagagtttatattaatttttcaaattcaatctatgtt 31530115  T
Q  124 gtta 127  Q
    ||||    
T  31530116 gtta 31530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 47669807 - 47669910
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||  || ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  47669807 aaaaacctccctcatttggaggaactcaaaaattgtattgggggagagttttggagggttatggagggtttatatgaatttttcaaattcaatctatgtt 47669906  T
Q  124 gtta 127  Q
    ||||    
T  47669907 gtta 47669910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 13270357 - 13270256
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| ||||| ||||||| || |||||||||||||| || ||||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  13270357 aaaaatccccctcatttgggg-aattcaaaaattgtattggggagggttttaggaggttatggagggtttatatgaatttttcaaattcaatctatgttg 13270259  T
Q  125 tta 127  Q
    |||    
T  13270258 tta 13270256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 38317313 - 38317209
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgagggg-ttatggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    |||||||  |||| ||||||||||||||||||||||||| ||  ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  38317313 aaaaatcctcctcatttgggggaactcaaaaattgtattgggggagggttttgggggggttatggagggtttatatgaatttttcaaatccaatctatgt 38317214  T
Q  123 tgtta 127  Q
    |||||    
T  38317213 tgtta 38317209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 48830898 - 48830795
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||| ||||||| |||||| |||||||||||||||||| ||  ||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||    
T  48830898 aaaaacctccctcatttgggagaactcaaaaattgtattgggggagggttttggggggttatggagtgtttgtatgaatttttcaaattcaatcaatgtt 48830799  T
Q  124 gtta 127  Q
    ||||    
T  48830798 gtta 48830795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 49404707 - 49404604
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggca-gggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||| || ||| ||||||||||||||||| ||||||| || | |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||    
T  49404707 aaaaatttctctcatttgggggaactcaaaatttgtattggggaagggttttgggaggttatgcagggtttatatgaatttttcaaattcaatctatgtt 49404608  T
Q  124 gtta 127  Q
    ||||    
T  49404607 gtta 49404604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 17622541 - 17622456
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17622541 tttgggggaactcaaaaattgtattgggggagggttttg-ggggttatggagggtctatatgaatttttcaaattcaatctatgttg 17622456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 32649075 - 32648985
Alignment:
Q  38 ttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||| |||||||||||||| ||  ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  32649075 ttttgggggaattcaaaaattgtattgggggagggttttggggggttatggaaggtttatatgaatttttcaaatttaatctatgttgtta 32648985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 3127081 - 3126993
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||| | | ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3127081 tttgggggaactcaaaaattgtattggaggagggttttc-ggggttaaggagggtttatatgaatttttcaaattcaatctatgttgtta 3126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 24279933 - 24280014
Alignment:
Q  47 aactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24279933 aactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatttaatctatgttgtta 24280014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 16535688 - 16535791
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggca-gggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||| |||||| |||||||||||| |||||||||||| || | |||| ||| ||  ||||||||||||||||||||||||||||||| ||||||||||    
T  16535688 aaaaatatccctcatttgggggaactaaaaaattgtattggggaagggtcttggggaattatggagggtttatatgaatttttcaaatttaatctatgtt 16535787  T
Q  124 gtta 127  Q
    ||||    
T  16535788 gtta 16535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 38366043 - 38366124
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  38366043 ggggaactcaaaaattgtattgggggagggttttg-ggggttatcgagggtttatatgaatttttcaaattcaatctatgttg 38366124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 21296189 - 21296086
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||  |||||| |||||||||||||||||| ||  ||||||||||||| |||||||  |||||||| ||||||||||||| ||||||||||    
T  21296189 aaaaatcccccttatttgggagaactcaaaaattgtattgggggagggttttgagggattatggatcgtttatataaatttttcaaattgaatctatgtt 21296090  T
Q  124 gtta 127  Q
    ||||    
T  21296089 gtta 21296086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 36151440 - 36151351
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||| ||  ||| ||||| ||||||||| |||||||||||||||||||||| ||||||||  |||||||    
T  36151440 tttgggggaactcaaaaattgtattgggggaggattttggggggttatgaagggtttatatgaatttttcaagttcaatcttcgttgtta 36151351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 54806485 - 54806570
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||| |||| ||  ||||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  54806485 ggggaactcaaaaattatattgggggagggttttggggggttacagaggatttatatgaatttttcaaattcaatctatgttgtta 54806570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 32060700 - 32060746
Alignment:
Q  81 gttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32060700 gttatggagggtttatatgaatttttcaaattcaatctatgttgtta 32060746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 32948553 - 32948507
Alignment:
Q  81 gttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32948553 gttatggagggtttatatgaatttttcaaattcaatctatgttgtta 32948507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 42759726 - 42759640
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatcta 119  Q
    |||| ||||||||||||||||||||||| | | | ||||||||||||| |  ||||||||||| |||||||||||||||| ||||||    
T  42759726 cctcatttgggggaactcaaaaattgtactagaggagggttttgagggatcttggagggtttacatgaatttttcaaatttaatcta 42759640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 25057723 - 25057643
Alignment:
Q  47 aactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||| | || | || |||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||    
T  25057723 aactaaaaaattgtaatggggaaggatttgaggggttatgaaggatttagatgaattttttaaattcaatctatgttgtta 25057643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 12708909 - 12708815
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  12708909 cctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 12708815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 23708191 - 23708233
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  23708191 ttatggagggtttatatgaatttttcaaatccaatctatgttg 23708233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 30198846 - 30198752
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | |||||||||||| ||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  30198846 cctcatttggaggaactaaaaaattgtattggaggagggttttgaggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 30198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 33500526 - 33500620
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaa-ttcaatctatgttgtta 127  Q
    |||| ||||| |||||| ||||| |||||| || ||||||||| |||| | ||||||||| ||| |||||||||||| || ||||||||||||||    
T  33500526 cctcatttggaggaactaaaaaaatgtattggggagggttttggggggctttggagggttaataagaatttttcaaatttaaatctatgttgtta 33500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 21730357 - 21730308
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||    
T  21730357 ggggttatggagggtttatatgaattctttaaatccaatctatgttgtta 21730308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 37756741 - 37756704
Alignment:
Q  90 ggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37756741 ggtttatatgaatttttcaaattcaatctatgttgtta 37756704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 38136904 - 38136815
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||| | | |||||||||||| ||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  38136904 tttggaggaactaaaaaattgtattggaggagggttttgaggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 38136815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 24291437 - 24291485
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  24291437 gggttatgaagggttcatatgaatttttcaaattcaatctttgttgtta 24291485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 49936563 - 49936602
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  49936563 agggtttatatgaattcttcaaattcaatctatgttgtta 49936602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 42650642 - 42650736
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||| |||||||||||| | | ||||||||| | ||||  ||| |||||||||||||| |||||||| ||| ||||| ||||    
T  42650642 cctcatttgggggaactaaaaaattgtattggaggagggttttgggaggtttgggatggtttatatgaattcttcaaatttaatttatgtcgtta 42650736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 55509928 - 55509974
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||| ||||||||||||||||||| |||||||| |||||||||||    
T  55509928 ggggttttggagggtttatatgaattcttcaaatttaatctatgttg 55509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 30307379 - 30307468
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtt 126  Q
    |||| |||||||||||| ||||||||||||||  ||||||||| |||||   |||||| ||||||||||| |||||||| ||| |||| ||||    
T  30307379 cctcatttgggggaactaaaaaattgtatttg--agggttttggggggtgtaggaggg-ttatatgaattcttcaaatttaatatatgctgtt 30307468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 40423109 - 40423054
Alignment:
Q  72 ttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||  |||| ||||||||||||| |||||||| ||||||||||||||    
T  40423109 ttttggggggttcgggagagtttatatgaattcttcaaatttaatctatgttgtta 40423054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 11976895 - 11976937
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||    
T  11976895 tggagggtttatatgaattttttaaatttaatatatgttgtta 11976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 16318623 - 16318717
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | |||| |||  |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  16318623 cctcatttggaggaactaaaaaattgtattggaggagggattttgggggttttggagggttaataagaattattcaaatttaatttatgttgtta 16318717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 24662785 - 24662743
Alignment:
Q  70 ggttttgaggggttatggagggtttatatgaatttttcaaatt 112  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  24662785 ggttttaaggggttctggagggtttacatgaatttttcaaatt 24662743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 28175539 - 28175445
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||  | | ||||||||||||| || ||||||||| ||| ||||| || ||||| ||| ||||||||||    
T  28175539 cctcatttggaggaactaaaaaattgtataggaggagggttttgagggattttggagggttaataagaattctttaaatttaatttatgttgtta 28175445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 43031741 - 43031699
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||||||||||||||||||| | ||||||||    
T  43031741 tggagtgtttatatgaatttttcaaattcaatatttgttgtta 43031699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 48417633 - 48417591
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||||||| |||||||||||| ||||||||||    
T  48417633 tggagggtctatatgaattcttcaaattcaatttatgttgtta 48417591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 6836459 - 6836500
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||| || ||||||| ||||||    
T  6836459 ggagggtttatatgaatttttcaagtttaatctatcttgtta 6836500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 15498860 - 15498783
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatcta 119  Q
    ||||||||||||||||||||| |   ||||||||| | |||| ||||||||||| ||||||| || ||||| ||||||    
T  15498860 ggggaactcaaaaattgtattggatgagggttttgggcggttttggagggtttacatgaattctttaaatttaatcta 15498783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 46176966 - 46176925
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctat 120  Q
    ||||| ||| |||||||||||||||||||||||| |||||||    
T  46176966 gggttttggggggtttatatgaatttttcaaatttaatctat 46176925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 8827841 - 8827801
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  8827841 gagggtttatatcaattcttcaaatttaatctatgttgtta 8827801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 9046432 - 9046396
Alignment:
Q  91 gtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  9046432 gtttatatgaattcttcaaattcaatatatgttgtta 9046396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 31340786 - 31340822
Alignment:
Q  27 aaatctccctcttttgggggaactcaaaaattgtatt 63  Q
    |||||||||| |||||||||||||||||||| |||||    
T  31340786 aaatctccctattttgggggaactcaaaaatggtatt 31340822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 43793448 - 43793488
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatct 118  Q
    |||||| |||||||||||||||||||||| ||||| |||||    
T  43793448 ggggttttggagggtttatatgaattttttaaatttaatct 43793488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 45823597 - 45823645
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||| ||||||||||||| |||||||| ||| ||||||||||    
T  45823597 gggttttggagagtttatatgaattcttcaaatttaatttatgttgtta 45823645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 45971565 - 45971641
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttca 108  Q
    ||||| |||||||||||| |||||||||||| | | ||| ||||  ||| || |||| |||||||||||||||||||    
T  45971565 ccctcatttgggggaactaaaaaattgtattggaggaggatttttggggattttggaaggtttatatgaatttttca 45971641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 49668143 - 49668095
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||| ||||||| |||||||||| ||||| ||||||||||||||    
T  49668143 gggttttggggggtttacatgaattttttaaatttaatctatgttgtta 49668095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 6816 - 6919
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6816 aaaaatctccctcatttggggaaactcaaaaattgtattgggggagggttttgaggggttatggagagtttatatgaattttttaaattcaatctatgtt 6915  T
Q  124 gtta 127  Q
    ||||    
T  6916 gtta 6919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 36906184 - 36906285
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  36906184 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatgtt 36906283  T
Q  124 gt 125  Q
    ||    
T  36906284 gt 36906285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 34272512 - 34272615
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||||||||||| ||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34272512 aaaaatccccctcatttggggaaactcaaaaattgtattgggggaaggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 34272611  T
Q  124 gtta 127  Q
    ||||    
T  34272612 gtta 34272615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 1942119 - 1942034
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1942119 ggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 1942034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 36102974 - 36102871
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||| ||||||||||| |||||||  || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  36102974 aaaaatccccctcatttggaggaactcaaaatttgtattgcgggagggttttggggggttatggagggtttatttgaatttttcaaattcaatctatgtt 36102875  T
Q  124 gtta 127  Q
    ||||    
T  36102874 gtta 36102871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 2474850 - 2474748
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||  |||| |||||| ||||| |||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2474850 aaaaatcctcctcatttgggagaacttaaaaattgtattgtgggaggattttg-ggggttatggagggtttatatgaatttttcaaattcaatctatgtt 2474752  T
Q  124 gtta 127  Q
    ||||    
T  2474751 gtta 2474748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 3404657 - 3404555
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||| ||||| |||||| |||| ||| | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3404657 aaaaatctccctcatttgggg-aactcgaaaattatattgtgggatggttttggggggttatagagggtttatatgaatttttcaaattcaatctatgtt 3404559  T
Q  124 gtta 127  Q
    ||||    
T  3404558 gtta 3404555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 25033377 - 25033480
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||  |||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||    
T  25033377 aaaaatcatcctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatgaggggtttatatgaatttttcaaattcgatctatgtt 25033476  T
Q  124 gtta 127  Q
    ||||    
T  25033477 gtta 25033480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 13865158 - 13865073
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  13865158 ggggaactcaaaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaatttaatctatgttgtta 13865073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 31297414 - 31297333
Alignment:
Q  43 ggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||| |||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31297414 ggggaactaaaaaattgtattggaggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 31297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 29612002 - 29612091
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||| | |||||||||||| ||  ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29612002 tttgggggaattaaaaaattgtattgggtgagggttttggggggttatgaagggtttatatgaatttttcaaattaaatctatgttgtta 29612091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 34349730 - 34349815
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| ||||||| |||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  34349730 ggggaacttaaaaattatatttggggagggttttggggggttatgaagggtttatatgaatttttcaaattcaatatatgttgtta 34349815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 4734526 - 4734477
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4734526 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 4734477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 37659615 - 37659516
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggca-gggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| | ||| ||| ||||||||||||||||||||| || | |||||||| ||| ||||||| | ||||||| ||||||||||||||||||||||||    
T  37659615 aaaaatccctctcatttaggggaactcaaaaattgtattggggaagggttttgggggattatggaagatttatataaatttttcaaattcaatctatgtt 37659516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 40985149 - 40985070
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaatt 112  Q
    |||| ||||||||||||||||||||||||| | | |||||||||||||||| ||||||||||| ||||||| ||||||||    
T  40985149 cctcatttgggggaactcaaaaattgtattggaggagggttttgaggggttttggagggtttacatgaattcttcaaatt 40985070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 1839895 - 1839801
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||| |||||||||||| | | ||||||||| ||||||   ||||||||||||||||| |||||||| ||| ||||||||||    
T  1839895 cctcatttgggggaacttaaaaattgtattggaggagggttttggggggtttaagagggtttatatgaattcttcaaatttaatatatgttgtta 1839801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 43733195 - 43733101
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||| ||||| | |||||||||||| | | ||||||||  || ||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  43733195 cctcatttgagggaattaaaaaattgtattggaggagggtttttgggagttttggaggatttatatgaatttttaaaattcaatctatgttgtta 43733101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 27085363 - 27085448
Alignment:
Q  43 ggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||||||||| | | | |||||| |||||||  |||||||||||||||||| |||||||| ||| ||||||||||    
T  27085363 ggggaactaaaaaattgtattggaggatggttttaaggggtttgggagggtttatatgaattcttcaaatttaatatatgttgtta 27085448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 39193942 - 39194031
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||| |||| ||||||| | | ||||||||  |||||| || |||||||||||||||| |||||||| | ||||||||||||    
T  39193942 tttgggggaactaaaaagttgtattggaggagggtttttgggggttttgaagggtttatatgaattcttcaaatttattctatgttgtta 39194031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 43007757 - 43007798
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  43007757 ggagggtttatatgaatttttcaaatttaatctatgttgtta 43007798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 13227751 - 13227810
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||| |||| || |||||||||||||||| |||||||| ||| ||||||||||    
T  13227751 agggttttgagaggttttgaagggtttatatgaattattcaaatttaatttatgttgtta 13227810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 15108296 - 15108245
Alignment:
Q  76 gaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| || ||||||| |||||||||||||||||||| ||||||||||||||    
T  15108296 gagggtttttggagggattatatgaatttttcaaattaaatctatgttgtta 15108245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 34304720 - 34304784
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatat 98  Q
    ||||| |||||||||||||||||||||||||  || ||||||||  |||||||||||||||||||||    
T  34304720 ccctcatttgggggaactcaaaaattgtattaggggagggtttt--ggggttatggagggtttatat 34304784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 12506271 - 12506177
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||| |||||||||||| | | ||| ||||  |||| | ||||||||||||||||||| |||||||| ||| ||| ||||||    
T  12506271 cctcatttgggggaactaaaaaattgtattggagaaggatttttgggggctttggagggtttatatgaattcttcaaatttaatatatattgtta 12506177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 43239714 - 43239766
Alignment:
Q  72 ttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||| || || |||||||||||||||| |||||||| |||||||||||    
T  43239714 ttttgagggattttgaagggtttatatgaattcttcaaatttaatctatgttg 43239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 4873262 - 4873223
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  4873262 agggtttatatgaatttttcaaatttaatctgtgttgtta 4873223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 11226423 - 11226381
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||| | | ||||||||||    
T  11226423 tggagggtttatatgaatttttcaaatttattatatgttgtta 11226381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 13258544 - 13258582
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  13258544 tggagggtttatatgaattcttcaaatccaatctatgtt 13258582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 31149960 - 31150002
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||| |||||||| | ||||||||||||    
T  31149960 tggagggtttatatgaattcttcaaatttattctatgttgtta 31150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 34148594 - 34148564
Alignment:
Q  93 ttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||||||||||||||||||||||||||    
T  34148594 ttatatgaatttttcaaattcaatctatgtt 34148564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 40999205 - 40999163
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||||||  |||||||||||||    
T  40999205 tggagagtttatatgaatttttcaaattatatctatgttgtta 40999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 12595371 - 12595408
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  12595371 tggagggtttatatgaattcttcaaatttaatctatgt 12595408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 29584233 - 29584274
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| |||||| | ||||||||||||||    
T  29584233 ggagggtttatatgaattcttcaaaattaatctatgttgtta 29584274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 31598440 - 31598403
Alignment:
Q  90 ggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  31598440 ggtttatatgaattttttaaattcaatatatgttgtta 31598403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 41866156 - 41866108
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| || ||||||||||| |||| |||||||| ||||||||||||||    
T  41866156 gggttttgaagggtttatataaattcttcaaatttaatctatgttgtta 41866108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 26574479 - 26574376
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  26574479 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggatggtttatatgaatttttcaaattcaatctatgtt 26574380  T
Q  124 gtta 127  Q
    ||||    
T  26574379 gtta 26574376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 1029290 - 1029393
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||| || ||| |||||||||| | |||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1029290 aaaaatttctctcatttgggggaagtaaaaaattgtattaggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 1029389  T
Q  124 gtta 127  Q
    ||||    
T  1029390 gtta 1029393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 23095212 - 23095109
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||||||||| |||||||||||  ||  ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  23095212 aaaaatccccctcatttgggggaactaaaaaattgtatggggggagggttttggggggttatggagagtttatatgaatttttcaaattcaatctatgtt 23095113  T
Q  124 gtta 127  Q
    ||||    
T  23095112 gtta 23095109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 24734879 - 24734980
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||  ||||||| ||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  24734879 aaaaatccccctcatttgggggaactcaaa--ttgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatctatgtt 24734976  T
Q  124 gtta 127  Q
    ||||    
T  24734977 gtta 24734980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 4909999 - 4909896
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||| ||| ||||| |||||| |||||||||||| ||  ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  4909999 aaaaatctctctcatttggaggaacttaaaaattgtattgggggagggttttggggggttgtggagggtttatatcaatttttcaaattcaatctatgtt 4909900  T
Q  124 gtta 127  Q
    ||||    
T  4909899 gtta 4909896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 29241917 - 29241818
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||||||||||| ||  ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  29241917 aaaaatccccctcatttggggtaactcaaaaattgtattgggggagggttttagggggttatggagggtttatacgaatttttcaaattcaatctatgtt 29241818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 5825330 - 5825432
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||| ||||||||| ||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5825330 aaaaatccccctcatttgggg-aactcaaaatttgtattgggggagggttttgggggattatggagggtttatatgaatttttgaaattcaatctatgtt 5825428  T
Q  124 gtta 127  Q
    ||||    
T  5825429 gtta 5825432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 34914640 - 34914727
Alignment:
Q  42 gggggaactcaaaaattgtatttggc--agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||||||||||||| ||   ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34914640 ggggaaactcaaaaattgtattggggggagggttttgggaggttatggagggtttatatgaatttttcaaattcaatttatgttgtta 34914727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 26481215 - 26481112
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||| ||||| ||||||||||||||| ||  ||| ||||| |  ||||||||||||||||||||||||||||||||||||||| |||    
T  26481215 aaaaatccccctcatttaggggagctcaaaaattgtattgggggaggattttgggaagttatggagggtttatatgaatttttcaaattcaatctacgtt 26481116  T
Q  124 gtta 127  Q
    ||||    
T  26481115 gtta 26481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 31345438 - 31345352
Alignment:
Q  41 tgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||  || ||||||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||||    
T  31345438 tgggggaactcaaaaattgtattgagggagggttttg-gggattatggagagtttatatgaatttttcaaatttaatctatgttgtta 31345352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 15615686 - 15615763
Alignment:
Q  47 aactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||||||| | | |||||||| |||| || ||||||||||||||||||| |||||||| ||||| ||||    
T  15615686 aactcaaaaattgtattggagaagggttttaagggattttggagggtttatatgaattcttcaaatttaatctttgtt 15615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 26713905 - 26713953
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||| |||||||| | ||||||||||||    
T  26713905 gggttttggagggtttatatgaattcttcaaatttattctatgttgtta 26713953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 32222009 - 32222099
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||| ||||| |||||| |||||||||||| | | || ||||| |||| || ||||||||||||||||||| |||||||| || ||||||||    
T  32222009 cctcatttggaggaactaaaaaattgtattggaggagagtttt-agggattttggagggtttatatgaattcttcaaatttaaactatgttg 32222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 12779525 - 12779613
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||| |||| ||||||| | | ||||||||| | | || ||||||||| ||| ||||| |||||||| ||||||||||||||    
T  12779525 tttgggggaactaaaaagttgtattggaggagggttttg-gagattttggagggttaataagaattcttcaaatttaatctatgttgtta 12779613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 13120440 - 13120403
Alignment:
Q  90 ggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  13120440 ggtttacatgaattcttcaaattcaatctatgttgtta 13120403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 29054627 - 29054660
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctat 120  Q
    |||||||||||||||||||||||||| |||||||    
T  29054627 gagggtttatatgaatttttcaaatttaatctat 29054660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 19477300 - 19477356
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||| || ||| |||| | |||||||||||| |||||||| ||||||||||||||    
T  19477300 gttttgtggagttttggaagatttatatgaattcttcaaatttaatctatgttgtta 19477356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 20820561 - 20820521
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||||||||||||||||| ||| ||||||||||    
T  20820561 gaggatttatatgaatttttcaaatttaatatatgttgtta 20820521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 41962061 - 41961958
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41962061 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaattcaatctatgtt 41961962  T
Q  124 gtta 127  Q
    ||||    
T  41961961 gtta 41961958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 45555630 - 45555729
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  45555630 aaaaatccccctcatttgggggaactcaaaaattgtattgtgggagggttttggggggctatggagggtttatatgaatttttcaaattcaatctatgtt 45555729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 49683085 - 49682983
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| ||||| ||||||||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||||||||||||||||||| |||    
T  49683085 aaaaatccccctcatttgggggaactcaaaaattgtattggggagggttttgggaggttatggagggttaatatgaatttttcaaattcaatctatcttg 49682986  T
Q  125 tta 127  Q
    |||    
T  49682985 tta 49682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 24242176 - 24242073
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  |||||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  24242176 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggtgggttatggagggtttatatgaatttttcatattcaatctatgtt 24242077  T
Q  124 gtta 127  Q
    ||||    
T  24242076 gtta 24242073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 47714756 - 47714654
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  47714756 aaaaatctccctcatttgggg-aactcaaaaattgtattgggggagggttttggagggttatggagggtttatatgaatttttcaaattcaatctatgtt 47714658  T
Q  124 gtta 127  Q
    ||||    
T  47714657 gtta 47714654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 47789514 - 47789427
Alignment:
Q  41 tgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47789514 tgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 47789427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 38526151 - 38526253
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||| ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||    
T  38526151 aaaatctccctcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggagaatttatatgaatttttcaaattcaatatatgttg 38526250  T
Q  125 tta 127  Q
    |||    
T  38526251 tta 38526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 49860835 - 49860936
Alignment:
Q  27 aaatctccctcttttgggggaactcaaaaattgtatttggcaggg-ttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    ||||| ||||| |||||||||||| |||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49860835 aaatccccctcatttgggggaactaaaaaattgtattgggcgggggttttggggggttatggagggtttatatgaatttatcaaattcaatctatgttgt 49860934  T
Q  126 ta 127  Q
    ||    
T  49860935 ta 49860936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 39499195 - 39499298
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||| ||| ||||||||||||||||| ||  ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  39499195 aaaaatctccctcatttagggaaactcaaaaattgtattgggggaggattttagggggttatggagggtttatatgaatttttcaaattcaatctatgtt 39499294  T
Q  124 gtta 127  Q
    ||||    
T  39499295 gtta 39499298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 43237295 - 43237390
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||| ||||||||| ||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43237295 ccctcatttgggggaactcaacaattgtattgggggagggttttggggggttatggagggtttataagaatttttcaaattcaatctatgttgtta 43237390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 31178330 - 31178231
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggca-gggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| |||||| ||||| |||||||||||| || | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  31178330 aaaaatctccctcatttgggagaacttaaaaattgtattggggaagggttttg-ggggttatggaggatttatatgaatttttcaaattcaatctatgtt 31178232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 46312506 - 46312404
Alignment:
Q  24 gaaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgagggg-ttatggagggtttatatgaatttttcaaattcaatctatg 121  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||  ||||||||  | || ||||||||||||||||||||||||||||||||||||||||    
T  46312506 gaaaaatcttcctcatttgggggaactcaaaaattgtattgggggagggtttttggaggattatggagggtttatatgaatttttcaaattcaatctatg 46312407  T
Q  122 ttg 124  Q
    |||    
T  46312406 ttg 46312404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 38592968 - 38593052
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38592968 ggggaactcaaaaattgtatttggggagggttttg-gaggttatggagggtttatatgaatttttcaaattcaatatatgttgtta 38593052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 47434385 - 47434301
Alignment:
Q  43 ggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| ||  || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47434385 ggggaactcaaaaattgtgttgagggagggttttgaggg-ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 47434301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 44412220 - 44412136
Alignment:
Q  44 gggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||  || ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  44412220 gggaactcaaaaattgtattgagggagggttttggggggttatggaaggtttatatgaattttttaaattcaatctatgttgtta 44412136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 30131970 - 30131867
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||| |||||| | ||||| ||||||||||||||||| ||  ||||||||| |||||||  |||||||||||||||||||||||||||||||||| ||    
T  30131970 aaaaatttccctcatctggggaaactcaaaaattgtattgggggagggttttggggggttacagagggtttatatgaatttttcaaattcaatctatctt 30131871  T
Q  124 gtta 127  Q
    ||||    
T  30131870 gtta 30131867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 55439581 - 55439684
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||  | ||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  55439581 aaaaatccccctcatttggaggaactcaaaaattgtattaggggatggttttggggggttatggaaggtttatatgtttttttcaaattcaatctatgtt 55439680  T
Q  124 gtta 127  Q
    ||||    
T  55439681 gtta 55439684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 36796420 - 36796524
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatga-atttttcaaattcaatctatgt 122  Q
    ||||||| ||||| |||||||||||||||||||||||||  || ||| ||||| |||||||||||||||||||||||  |||||  ||||||||||||||    
T  36796420 aaaaatccccctcatttgggggaactcaaaaattgtattgggggaggcttttggggggttatggagggtttatatgattttttttcaattcaatctatgt 36796519  T
Q  123 tgtta 127  Q
    |||||    
T  36796520 tgtta 36796524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 23163528 - 23163623
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||| |||||||||||||||||||| ||  ||||| ||| ||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  23163528 ccctcatttgagggaactcaaaaattgtattgggggagggtcttggggggttatggagggtttatataaatttttttaattcaatctatgttgtta 23163623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 25428666 - 25428768
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| |||| || |||||||||||| ||||  || || |||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25428666 aaaaatctccctcatttgagg-aactcaaaaattatattgcgggagagttttagggggttatggagggtttatataaatttttcaaattcaatctatgtt 25428764  T
Q  124 gtta 127  Q
    ||||    
T  25428765 gtta 25428768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 3043202 - 3043110
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaat 116  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||  ||||||||| | ||||| ||| |||||||||||||||||||||||||||    
T  3043202 aaaaatccccctgatttgggggaactcaaaaattgtattgggggagggttttgggaggttacggatggtttatatgaatttttcaaattcaat 3043110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 51686521 - 51686606
Alignment:
Q  43 ggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||||||||| | | ||||||||  |||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  51686521 ggggaactaaaaaattgtattggaggagggtttttgggggttttggagggtttatatgaatttttcaaatttaatttatgttgtta 51686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 27055929 - 27055885
Alignment:
Q  83 tatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27055929 tatggagggtttatatgaatttttcaaattcaatctatgttgtta 27055885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 34306650 - 34306698
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34306650 gggttttggagggtttatatgaatttttcaaattcaatctatgttgtta 34306698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 2420668 - 2420759
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||||||||| ||||||| ||||||||||||||||| || || ||||||          ||||||||||||||||||||||||||||||||||||||    
T  2420668 aaaaatctccctcatttgggg-aactcaaaaattgtattggggagagttttg----------gagggtttatatgaatttttcaaattcaatctatgttg 2420756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 17642587 - 17642689
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| ||||||| ||||||||||||||||  |   |||||||||   ||||||||||| ||||||| |||||||||||||||||| |||||    
T  17642587 aaaaatctccctcatttgggg-aactcaaaaattgtatcggatgagggttttggaaggttatggaggatttatataaatttttcaaattcaatccatgtt 17642685  T
Q  124 gtta 127  Q
    ||||    
T  17642686 gtta 17642689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 38515288 - 38515335
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38515288 ggggttatggagggtttatataaatttttcaaattcaatctatgttgt 38515335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 53888498 - 53888585
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||||||| |||||||||||| | | ||||||||| ||||||  |||||||||||||||||| |||||||| ||| ||||||||    
T  53888498 tttgggggaactaaaaaattgtattggaggagggttttggggggtttgggagggtttatatgaattcttcaaatttaatatatgttgt 53888585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 7661054 - 7661136
Alignment:
Q  46 gaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||| |||| ||  || ||||||  |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  7661054 gaactcaaaaattatattgggggagagttttggagggttatggaggatttatatgaatttttcaaattcaatatatgttgtta 7661136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 32858836 - 32858930
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||||||||||||||||||||| | | || |||||| |||||| ||||||||||| |||||||  ||||||| ||||||||| ||||    
T  32858836 cctcatttgggggaactcaaaaattgtattcgaggagagttttggggggttttggagggtttacatgaattcatcaaatttaatctatgtagtta 32858930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 35283093 - 35283187
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||| |||||||||||| | | | ||||||||||||||  |||||||||||||||||| |||| ||| ||| ||||||||||    
T  35283093 cctcatttgggggaactaaaaaattgtattggaggaaggttttgaggggtttgggagggtttatatgaattcttcatatttaatatatgttgtta 35283187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 33982761 - 33982720
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33982761 ggagggtttatatgaatttttcaaattcaatctatgttgtta 33982720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 43007548 - 43007503
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  43007548 ttatgcagggtttatatgaatttttcaaattcaatctatgttgtta 43007503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 29623277 - 29623336
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||  |||||||||||||||||| |||||||| ||| ||||||||||    
T  29623277 agggttttgaggggtttaggagggtttatatgaattcttcaaatttaatatatgttgtta 29623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 30121548 - 30121505
Alignment:
Q  82 ttatggagggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  30121548 ttatggagagtttatatgaatttttcaaattcaatctatgttgt 30121505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 517706 - 517613
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||||||||||||| |||||||   | ||||||||| |||||| ||||||||| ||| |||||||||||||| ||| ||||||||||    
T  517706 cctcatttgggggaactcaaaa-ttgtattgaaggagggttttggggggttttggagggttcataagaatttttcaaatttaatttatgttgtta 517613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 33944715 - 33944621
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  33944715 cctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 33944621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 46017268 - 46017305
Alignment:
Q  90 ggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46017268 ggtttatatgaatttttcaaattcaatctatgttgtta 46017305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 42583328 - 42583284
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  42583328 ggggttatggatagtttatatgaatttttcaaattcaatctatgt 42583284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 47359361 - 47359409
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  47359361 gggttttggagggtttatatgaattcttcaaatttaatctatgttgtta 47359409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 49183737 - 49183785
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  49183737 gggttttggagggtttatatgaattcttcaaatttaatctatgttgtta 49183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 5939864 - 5939762
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| |||| ||||| ||||||  |||| |||||| | | ||||||||| || ||| |||||||||  || |||||||||||||| |||||||||||    
T  5939864 aaaatcttcctcatttggaggaactacaaaactgtattggaggagggttttggggcgttttggagggttagtaagaatttttcaaatttaatctatgttg 5939765  T
Q  125 tta 127  Q
    |||    
T  5939764 tta 5939762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 19148211 - 19148267
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||  |||||||||||||||||  |||||||| ||| ||||||||||    
T  19148211 gttttgaggggtttgggagggtttatatgaatgcttcaaatttaatttatgttgtta 19148267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 37674182 - 37674134
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||||||||||    
T  37674182 gggttttggagggttaataagaatttttcaaatttaatctatgttgtta 37674134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 39114985 - 39114949
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39114985 gagggtttatatgaattcttcaaattcaatctatgtt 39114949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 54372597 - 54372557
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  54372597 gagggtttatatgaattcttcaaattcagtctatgttgtta 54372557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 24588321 - 24588274
Alignment:
Q  80 ggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||||||||    
T  24588321 ggttttggagggtttaaatgaattcttcaaattccatctatgttgtta 24588274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 11040911 - 11040874
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatt 63  Q
    |||||||||||  |||||||||||||||||||||||||    
T  11040911 aaaatctcccttatttgggggaactcaaaaattgtatt 11040874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 32721101 - 32721064
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  32721101 agggtttatatgaatttttcaaatttaatatatgttgt 32721064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 38515247 - 38515288
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttgg 66  Q
    ||||||| ||||| |||||| |||||||||||||||||||||    
T  38515247 aaaaatccccctcatttgggagaactcaaaaattgtatttgg 38515288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 42155984 - 42155947
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttgt 125  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  42155984 agggtttatatgaatttttcaaatttaatatatgttgt 42155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 48370211 - 48370170
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||    
T  48370211 ggaggatttatatgaatttttcaaatttaatttatgttgtta 48370170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 44400751 - 44400799
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| || |||||| ||| |||||||||||||| ||||||||||||||    
T  44400751 gggttttgtagggttaataagaatttttcaaatttaatctatgttgtta 44400799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 26149614 - 26149703
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26149614 tttgggggaactcaaaaattgtattgggagagggttttgaggggttatggaggatttatatgaatttttcaaattcaatctatgttgtta 26149703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 2020978 - 2021080
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| |||||||| || ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2020978 aaaaatccccctcttt-ggaggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatatgaattttttaaattcaatctatgtt 2021076  T
Q  124 gtta 127  Q
    ||||    
T  2021077 gtta 2021080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 38928786 - 38928683
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtattt-ggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||||||||||||||||||||||||  || ||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  38928786 aaaaatccccctcatttgggggaactcaaaaattgtattgcgggagggttttggggggttatggagtgtttatatgaatttttcaaatccaatctatgtt 38928687  T
Q  124 gtta 127  Q
    ||||    
T  38928686 gtta 38928683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 41694974 - 41695077
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  41694974 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttgagggattatggatggtttaaatgaatttttcaaattcaatctatgtt 41695073  T
Q  124 gtta 127  Q
    ||||    
T  41695074 gtta 41695077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 17092903 - 17092997
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||||| ||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17092903 cctcatttggggaaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 17092997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 10295480 - 10295583
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcaggg-ttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| || ||||||||||||| |||||||||||||| || | || ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  10295480 aaaaatccccgtcttttgggggaattcaaaaattgtattggggaaggattttgggaggttatggagggtttatatgaatttttcaaattcaatctatgtt 10295579  T
Q  124 gtta 127  Q
    ||||    
T  10295580 gtta 10295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 27480256 - 27480153
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||  |||| |||| |||||||||||||||||||| ||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  27480256 aaaaatcctcctcatttgagggaactcaaaaattgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatctatgtt 27480157  T
Q  124 gtta 127  Q
    ||||    
T  27480156 gtta 27480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 35701057 - 35701147
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattca 114  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||    
T  35701057 aaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattca 35701147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 37508467 - 37508371
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggc-agggtttt-gaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||| ||||||||||||||||||| ||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37508467 ccctcatttggaggaactcaaaaattgtattgggggagggtttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 37508371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 32760754 - 32760848
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatcta 119  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||  ||||||||| || ||||||||||| |||| ||||||||||||    
T  32760754 aaaaatctccctcatttgggggaactcaaaaattgtattggggagggtttttgggggttatgaagtgtttatatgaactttttaaattcaatcta 32760848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 25026919 - 25027022
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggca-gggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||||||||| |||||| ||||| |||||||||||| || | |||||||| |||||||||||||||| |||| | ||||| ||||||||||||||||    
T  25026919 aaaaatctccctcatttgggagaactaaaaaattgtattggggaagggttttggggggttatggagggttaatataatttttttaaattcaatctatgtt 25027018  T
Q  124 gtta 127  Q
    ||||    
T  25027019 gtta 25027022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 4649071 - 4648968
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| |||| ||||||||||||| |||||| ||  |||| |||  |||||||||||| |||||||| ||||||||||||||||||||||||    
T  4649071 aaaaatccccctcatttgagggaactcaaaaactgtattgggggagggctttagggggttatggagagtttatataaatttttcaaattcaatctatgtt 4648972  T
Q  124 gtta 127  Q
    ||||    
T  4648971 gtta 4648968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 35868826 - 35868928
Alignment:
Q  24 gaaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgt 122  Q
    |||||||  ||||| |||||||||||||||||||| |||| ||  || |||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  35868826 gaaaaattcccctcatttgggggaactcaaaaattatattgggggagagttttt-ggggttatgaagggtttatatgaatttttcaaattcaatctatgt 35868924  T
Q  123 tgtt 126  Q
    ||||    
T  35868925 tgtt 35868928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 1658188 - 1658273
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||||| |||||||||||||| ||  ||| ||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  1658188 tttgggggaattcaaaaattgtattgggggaggatttttggaggttatggagggtttatatgaatttttcaaattcaatctatgtt 1658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 38302428 - 38302343
Alignment:
Q  33 ccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||| |||||||||||||||||||||||      ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||    
T  38302428 ccctcatttgggggaactcaaaaattgtaca----agggttttg-gaggttatgaagggtttatatgaatttttcaaattcaatctatgtt 38302343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 38120259 - 38120177
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatcta 119  Q
    ||||||||||||| ||||||||||||||||||||||||| ||            |||||||||||||||||||||||||||||||||| ||||||    
T  38120259 aaaaatctccctcatttgggggaactcaaaaattgtattggg------------gggttatggagggtttatatgaatttttcaaatttaatcta 38120177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 41638424 - 41638465
Alignment:
Q  80 ggttatggagggtttatatgaatttttcaaattcaatctatg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41638424 ggttatggagggtttatatgaatttttcaaattcaatctatg 41638465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 1935179 - 1935088
Alignment:
Q  38 ttttgggggaact-caaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||| ||||||||||||| | | |||| |||| |||||| |||||||||||| |||||| |||||||| ||| ||||||||||    
T  1935179 ttttgggggaactacaaaaattgtattggaggagggctttggggggttttggagggtttatgtgaattcttcaaatttaatatatgttgtta 1935088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 6491182 - 6491284
Alignment:
Q  26 aaaatctccctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    ||||||| |||| ||||||||||||||||||||||||| | | | | ||||| || |||  |||||||||||||||||| |||||||| ||  |||||||    
T  6491182 aaaatcttcctcatttgggggaactcaaaaattgtattggaggaagattttggggtgtttcggagggtttatatgaattcttcaaatttaacttatgttg 6491281  T
Q  125 tta 127  Q
    |||    
T  6491282 tta 6491284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 33718204 - 33718281
Alignment:
Q  48 actcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaa-tttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||   || |||| | ||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  33718204 actcaaaaattgtatttgg---gggtttgggtggttatggaggatttatatgaattttttcaaattcaatctacgttgtta 33718281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 12096916 - 12096996
Alignment:
Q  40 ttgggggaactcaaaaattgtatttggcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctat 120  Q
    |||||||||||||||||||||||  |  || |||||| |||||| |||| |||||  ||||||| ||||||||||||||||    
T  12096916 ttgggggaactcaaaaattgtataggagagtgttttggggggttttggatggtttgcatgaattcttcaaattcaatctat 12096996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 37909043 - 37909091
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  37909043 gggttttggagggtttatatgaattcttcaaattcaatctatattgtta 37909091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 39649577 - 39649668
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||| ||||| |||||| |||||||||||| | | ||| ||||| |||||| ||||||||| ||| |||||||||||| | |||||||||||    
T  39649577 cctcatttggaggaactaaaaaattgtattggaggaggattttggggggttttggagggttaataagaatttttcaaaattaatctatgttg 39649668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 15770102 - 15770140
Alignment:
Q  89 gggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  15770102 gggtttatatgaattttttaaattcaatctatgttgtta 15770140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 25598799 - 25598757
Alignment:
Q  78 ggggttatggagggtttatatgaatttttcaaattcaatctat 120  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  25598799 ggggttatggagagtttatatgaatttttcaaatccaatctat 25598757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 6373152 - 6373237
Alignment:
Q  43 ggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||| |||||||||||| | | |  |||||| ||||||  ||||||||||||||||||||| ||||| ||| ||||||||||    
T  6373152 ggggaactaaaaaattgtattcgaggaaagttttggggggtttgggagggtttatatgaattttttaaatttaatatatgttgtta 6373237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 14570079 - 14570031
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||||||||| |||||||| |||||| |||||||    
T  14570079 gggttttggagggtttatatgaattcttcaaatttaatctaagttgtta 14570031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 35705168 - 35705128
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtt 126  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  35705168 ggaggatttatatgaattcttcaaattcaatctatgttgtt 35705128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 38289365 - 38289413
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||||||||||||| || || |||||||||||||||||||||||    
T  38289365 gggttttggagggtttatacgagttcttcaaattcaatctatgttgtta 38289413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 38568406 - 38568358
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| ||| ||||||||||||||| |||||||| ||||||||||||||    
T  38568406 gggttttggggggtttatatgaattcttcaaatttaatctatgttgtta 38568358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 10955765 - 10955674
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||| |||||||||||| ||| |||||||| | | ||| |||||||||||| | ||| ||| |||| |||| |||||||| |||||||||||    
T  10955765 cctcatttgggggaactaaaagattgtattggaggaggattttgaggggttttagagagttaatatcaattcttcaaatttaatctatgttg 10955674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 41923219 - 41923258
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  41923219 agggtttatatgaattcttcaaatttaatctatgttgtta 41923258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 43496549 - 43496608
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||| ||| || |||||||||||||||| |||||||||| |||| |||| |||||    
T  43496549 agggttttgggggattttggagggtttatatgattttttcaaatccaatatatgatgtta 43496608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 119
Target Start/End: Original strand, 9096367 - 9096401
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatcta 119  Q
    ||||||||||||||||||| |||||||||||||||    
T  9096367 tggagggtttatatgaattcttcaaattcaatcta 9096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 43496903 - 43496862
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||| |||||||| ||| ||||||||||    
T  43496903 ggagggtttatatgaattcttcaaatttaatttatgttgtta 43496862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 3676535 - 3676499
Alignment:
Q  88 agggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||||||| |||||||| |||||||||||    
T  3676535 agggtttatatgaattcttcaaatttaatctatgttg 3676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 123
Target Start/End: Complemental strand, 3746515 - 3746483
Alignment:
Q  91 gtttatatgaatttttcaaattcaatctatgtt 123  Q
    |||||||| ||||||||||||||||||||||||    
T  3746515 gtttatataaatttttcaaattcaatctatgtt 3746483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 4841730 - 4841690
Alignment:
Q  87 gagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||| |||||||| ||| ||||||||||    
T  4841730 gagggtttatatgaattcttcaaattgaatatatgttgtta 4841690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 15974384 - 15974440
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||| ||| || ||||||||||||| ||||| || ||||| ||||||||||||||    
T  15974384 gttttgggggtttttggagggtttatacgaattctttaaatttaatctatgttgtta 15974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 18675752 - 18675708
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||| ||||||||||||||||||| ||| |||| ||||||||||    
T  18675752 gggttttggagggtttatatgaattcttcgaatttaatctatgtt 18675708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 32750690 - 32750722
Alignment:
Q  86 ggagggtttatatgaatttttcaaattcaatct 118  Q
    |||| ||||||||||||||||||||||||||||    
T  32750690 ggagtgtttatatgaatttttcaaattcaatct 32750722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 150 - 240
Alignment:
Q  38 ttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  150 ttttgggggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatataaatttttcaaatccaatctatgttgtta 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 2443 - 2353
Alignment:
Q  38 ttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  2443 ttttgggggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatataaatttttcaaatccaatctatgttgtta 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 35521 - 35436
Alignment:
Q  43 ggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35521 ggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 35436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 1575 - 1678
Alignment:
Q  25 aaaaatctccctcttttgggggaactcaaaaattgtatttggc-agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgtt 123  Q
    ||||||| ||||| | ||| ||||||||||||||||||| ||  ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  1575 aaaaatccccctcatatggaggaactcaaaaattgtattgggggagggttttggggggttatagagggtttatatgaatttttcaaatccaatctatgtt 1674  T
Q  124 gtta 127  Q
    ||||    
T  1675 gtta 1678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 3741 - 3651
Alignment:
Q  39 tttgggggaactcaaaaattgtatttggcagggttttgag--gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||||||||||||||||| || ||| ||||     |||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  3741 tttgggggaactcaaaaattgtattgggaaggatttttttttgggttatggagggtttatatgaatttttaaaatcaaatctatgttgtta 3651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 266 - 177
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||| | | ||||||||| |||||| ||||||||| ||| ||||| |||||||| ||||||||||||||    
T  266 tttggaggaactaaaaaattgtattggaggagggttttgcggggttttggagggttaataagaattcttcaaatttaatctatgttgtta 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 26385 - 26480
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg--gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| ||||||||||||||  | ||||||||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  26385 cctcatttggaggaactaaaaaattgtatttggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 26480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 37162 - 37221
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||||||||| | || ||||||||||||||||||| |||||||| ||| ||||||||||    
T  37162 agggttttgagagattttggagggtttatatgaattcttcaaatttaatatatgttgtta 37221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 30495 - 30539
Alignment:
Q  68 agggttttgaggggttatggagggtttatatgaatttttcaaatt 112  Q
    ||||||||||| | || ||||||||||||||||||| ||||||||    
T  30495 agggttttgagagattttggagggtttatatgaattcttcaaatt 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 4322 - 4366
Alignment:
Q  71 gttttgaggggttatggagggtttatatgaatttttcaaattcaa 115  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||    
T  4322 gttttgaggggttttagaggatttatatgaatttttcaaattcaa 4366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 90914 - 90866
Alignment:
Q  79 gggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||| |||||||||||||| |||||||| ||||||||||||||    
T  90914 gggttttggatggtttatatgaattcttcaaatttaatctatgttgtta 90866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 7129 - 7168
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttg 124  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  7129 tggagggtttatatgaattttttaaatttaatctatgttg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 12282 - 12240
Alignment:
Q  85 tggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| |||||||||||||| |||||||| ||||||||||||||    
T  12282 tggatggtttatatgaattcttcaaatttaatctatgttgtta 12240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 93581 - 93487
Alignment:
Q  34 cctcttttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    |||| ||||| |||||| |||||||||||| | | ||||||||| |||||| | ||||||| ||| ||||  |||||||| ||| ||||||||||    
T  93581 cctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttcgagggttaataagaatgcttcaaatttaatttatgttgtta 93487  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 29255 - 29344
Alignment:
Q  39 tttgggggaactcaaaaattgtatttg-gcagggttttgaggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 127  Q
    ||||| |||||| |||||||||||| | | | || |||| |||||| ||||||||| ||| ||||| |||||||| ||| ||||||||||    
T  29255 tttggaggaactaaaaaattgtattggaggaaggatttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 29344  T

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Target: scaffold0636 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 8412 - 8473
Alignment:
Q  39 tttgggggaactcaaaaattgtatt-tggcagggttttgaggggttatggagggtttatatgaa 101  Q
    |||||||||| ||||||||||||||  || ||||||||  ||||||||||||| ||||||||||    
T  8412 tttgggggaattcaaaaattgtattgagggagggtttt--ggggttatggaggatttatatgaa 8473  T

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