View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_low_122 (Length: 225)
Name: NF15745_low_122
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_low_122 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 10813212 - 10813418
Alignment:
| Q |
19 |
ttatataatttggcataaatgatactcacacgaggttaagagcaattacgcttagtttcgctcattttagcaaattctaaaaatagcaatccctcctagt |
118 |
Q |
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| T |
10813212 |
ttatataatttggcataaatgatactcacacgaggttaagagcaattacgcttagtttcgctcattttagcaaattctaaaaatagcaatccctcctagt |
10813311 |
T |
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| Q |
119 |
agggtgtatcggaacgcaaagagtaaagcgtaactgcaaatttcaaacagacatactaactcaatccttctctctcccaggtgaattttcatggctttat |
218 |
Q |
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| T |
10813312 |
agggtgtatcggaacgcaaagagtaaagcgtaactgcaaatttcaaacagacatactaactcaatccttctctctccgaggtgaattttcatggctttat |
10813411 |
T |
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| Q |
219 |
cgagaat |
225 |
Q |
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| T |
10813412 |
cgagaat |
10813418 |
T |
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