View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15745_low_21 (Length: 502)
Name: NF15745_low_21
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_low_21 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 450; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 19 - 492
Target Start/End: Complemental strand, 4627892 - 4627419
Alignment:
| Q |
19 |
ttgtgggtccgttttaaattaaataaatagatttagaagcattgttctctttcctaaggagttcactcacatatcataggttgaaattttccttctctct |
118 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627892 |
ttgtggttccgttttaaattaaataaatagatttagaagtattgttctctttcctaaggagttcactcacatatcataggttgaaattttccttctctct |
4627793 |
T |
|
| Q |
119 |
ctatttaagcaaatacatagtcacttcactttaacagtgcataacaaaaaataaaccagggatgagtaactttgcaaagagaatcaagccacatgctgtg |
218 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627792 |
ctatttaagcaaatacatattcacttcactttaacagtgcataacaaaaaataaaccagggatgagtaactttgcaaagagaatcaagccacatgctgtg |
4627693 |
T |
|
| Q |
219 |
ttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgtcaacactgaat |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627692 |
ttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacctttgtcaacactgaat |
4627593 |
T |
|
| Q |
319 |
acaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactaga |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627592 |
acaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactaga |
4627493 |
T |
|
| Q |
419 |
aggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
492 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4627492 |
aggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttg |
4627419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 204 - 492
Target Start/End: Original strand, 4258747 - 4259035
Alignment:
| Q |
204 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacct |
303 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | |||||| || |||||||| ||| ||| ||||||||||||| |
|
|
| T |
4258747 |
aagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacct |
4258846 |
T |
|
| Q |
304 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
403 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || | |||||| |
|
|
| T |
4258847 |
ttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatgg |
4258946 |
T |
|
| Q |
404 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
492 |
Q |
| |
|
| | || ||| | ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4258947 |
tctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttg |
4259035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 207 - 491
Target Start/End: Complemental strand, 4594564 - 4594280
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| ||||| ||||||||||| | ||| |||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
4594564 |
ccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttg |
4594465 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| || ||||| |||||| ||||||||||||||| | |
|
|
| T |
4594464 |
tcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtct |
4594365 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
491 |
Q |
| |
|
||||||| | ||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
4594364 |
aacaccaatggaaggtgatggtgatgttagtcaagacataccctctcttgctcaatctataagaaagaatttccttaaacccttt |
4594280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 180 - 475
Target Start/End: Complemental strand, 4517921 - 4517626
Alignment:
| Q |
180 |
atgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttc |
279 |
Q |
| |
|
||||| || |||||| ||||||| ||||||||||| ||| | | ||||| |||||||||||||||||||||||| ||||| | |||||||||| |||||| |
|
|
| T |
4517921 |
atgagcaattttgcagagagaattaagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttc |
4517822 |
T |
|
| Q |
280 |
accttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattt |
379 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |
|
|
| T |
4517821 |
atcttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattt |
4517722 |
T |
|
| Q |
380 |
tacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
475 |
Q |
| |
|
|||||||||||| || |||||||||||||| || ||||||| ||||| ||||||| ||||||||| ||||||||| | |||||||||||||| |
|
|
| T |
4517721 |
tacctttgagactattccagatggtttaactccgatagaaggcgatggtgatgttagtcaagacattatctctctttccgattcaataagaaagaa |
4517626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 179 - 466
Target Start/End: Complemental strand, 3173582 - 3173298
Alignment:
| Q |
179 |
gatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttctt |
278 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||| | ||||| |||| ||||||||||||||||| ||||||||| |||||||||| | ||| |
|
|
| T |
3173582 |
gatgagtaactttgcaaagagaa---aaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactactt |
3173486 |
T |
|
| Q |
279 |
caccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgatt |
378 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
3173485 |
cactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgatt |
3173386 |
T |
|
| Q |
379 |
ttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
466 |
Q |
| |
|
||| ||||||||| ||||||||||||||||| || | ||||||||||| ||||||| ||||||| ||| | |||||| || |||||| |
|
|
| T |
3173385 |
ttaactttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaat |
3173298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 180 - 455
Target Start/End: Complemental strand, 4576033 - 4575761
Alignment:
| Q |
180 |
atgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttc |
279 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||| ||||||||| | |||||||| | |||| |
|
|
| T |
4576033 |
atgagtaactttg--aagagaaa-aagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttc |
4575937 |
T |
|
| Q |
280 |
accttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattt |
379 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
4575936 |
accttagaggctttcacataacctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactt |
4575837 |
T |
|
| Q |
380 |
tacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctt |
455 |
Q |
| |
|
|| ||||||||| ||||||||||||||||| ||| || ||| |||| ||||| | ||||||| ||| ||||||| |
|
|
| T |
4575836 |
taactttgagactataccagatggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctctt |
4575761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 207 - 482
Target Start/End: Complemental strand, 4618855 - 4618580
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
||||||| |||| ||||||||| |||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4618855 |
ccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
4618756 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
| ||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| || |||| |||||||| ||| ||||||||||| |
|
|
| T |
4618755 |
ttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggttt |
4618656 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
482 |
Q |
| |
|
||||||| | ||||||||||| ||||||| |||||| |||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
4618655 |
aacaccaatggaaggtgatggtgatgttagtcaagatgtaccaactctttgtcaatcagtaagaaagaacttcctt |
4618580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 204 - 475
Target Start/End: Complemental strand, 4623864 - 4623593
Alignment:
| Q |
204 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacct |
303 |
Q |
| |
|
||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| | ||||||||| ||||| |||||| ||||||||||||||||| |
|
|
| T |
4623864 |
aagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacct |
4623765 |
T |
|
| Q |
304 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
403 |
Q |
| |
|
||| |||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |||| |||||||||||| |||||||| |
|
|
| T |
4623764 |
ttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatgg |
4623665 |
T |
|
| Q |
404 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
475 |
Q |
| |
|
|||||||||| | ||||||||||| ||||||| |||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
4623664 |
tttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaa |
4623593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 179 - 435
Target Start/End: Complemental strand, 4507490 - 4507237
Alignment:
| Q |
179 |
gatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttctt |
278 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||| | |||||| || ||||| |
|
|
| T |
4507490 |
gatgagtaattttgcaaagagaa---aaccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttctt |
4507394 |
T |
|
| Q |
279 |
caccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgatt |
378 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4507393 |
caccttcgaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgatt |
4507294 |
T |
|
| Q |
379 |
ttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgtta |
435 |
Q |
| |
|
||| ||||||||| |||||||||||||||| ||| | || |||||||| ||||||| |
|
|
| T |
4507293 |
ttaactttgagactctaccagatggtttaactccaatggatggtgatggtgatgtta |
4507237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 481
Target Start/End: Complemental strand, 4558679 - 4558405
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| || |
|
|
| T |
4558679 |
ccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacctatg |
4558580 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
| |||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||| || || |||||||| |
|
|
| T |
4558579 |
taaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggatggttt |
4558480 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
481 |
Q |
| |
|
||| ||| || |||||||||||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4558479 |
aactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4558405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 179 - 442
Target Start/End: Original strand, 4488746 - 4489006
Alignment:
| Q |
179 |
gatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttctt |
278 |
Q |
| |
|
|||||||||||||| | |||||| |||||||||| ||||| | ||||||||| ||||||||||||||||| ||||||||| ||||| |||| | ||| |
|
|
| T |
4488746 |
gatgagtaactttgaagagagaa---agccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactactt |
4488842 |
T |
|
| Q |
279 |
caccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgatt |
378 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
4488843 |
caccttagaggatttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgatt |
4488942 |
T |
|
| Q |
379 |
ttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaaga |
442 |
Q |
| |
|
||| ||||||||| || |||||||||||||| ||| ||| |||||||||||||||| |||||| |
|
|
| T |
4488943 |
ttagctttgagactattccagatggtttaactccaacagatggtgatggcgatgttagtcaaga |
4489006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 491
Target Start/End: Complemental strand, 4603662 - 4603380
Alignment:
| Q |
209 |
acatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgtc |
308 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| | ||||||||||||| |||||||||||||||||| |
|
|
| T |
4603662 |
acatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtc |
4603563 |
T |
|
| Q |
309 |
aacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaa |
408 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||||||| || || ||| |||||||| |||||| || || |||||||| ||| |
|
|
| T |
4603562 |
aacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatcccagatggactaa |
4603463 |
T |
|
| Q |
409 |
caccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
491 |
Q |
| |
|
|||| | |||||||||| |||||| |||||| |||| ||| |||||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
4603462 |
caccgatggaaggtgatgataatgttagtcaagatgtaccttctatttctcaatctataagaaagaatttccttaaacccttt |
4603380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 204 - 481
Target Start/End: Complemental strand, 4581571 - 4581294
Alignment:
| Q |
204 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacct |
303 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||| ||||||| |||||| | | ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4581571 |
aagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataacct |
4581472 |
T |
|
| Q |
304 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
403 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
4581471 |
ttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagatgg |
4581372 |
T |
|
| Q |
404 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
481 |
Q |
| |
|
|||||| || ||||||| ||| | ||||||| |||||||||| |||| | | ||||||| |||||||||||||| |
|
|
| T |
4581371 |
tttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcct |
4581294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 207 - 466
Target Start/End: Complemental strand, 4482419 - 4482160
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||||||||||||||| ||||||||| | ||| |||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
4482419 |
ccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataacctttg |
4482320 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| || |||||||||||||| |
|
|
| T |
4482319 |
tcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggttt |
4482220 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
466 |
Q |
| |
|
||| ||| | |||||||||| || || | ||||||| || ||||||| |||||||||| |
|
|
| T |
4482219 |
aactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaat |
4482160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 207 - 482
Target Start/End: Complemental strand, 4565583 - 4565308
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||| ||||| ||||||||||| | ||| |||||| |||||||||||||||| ||||| |||||||||| |
|
|
| T |
4565583 |
ccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttg |
4565484 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||||| | || |||| |||||| ||||||||||||||| | |
|
|
| T |
4565483 |
tcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtct |
4565384 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
482 |
Q |
| |
|
|||||| ||||||||||||| ||||||| |||||| |||| |||||| ||||||| |||||||| || |||||| |
|
|
| T |
4565383 |
aacaccgatagaaggtgatggtgatgttagtcaagatgtaccttctcttgctcaatctataagaaaaaatttcctt |
4565308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 204 - 492
Target Start/End: Original strand, 4265628 - 4265916
Alignment:
| Q |
204 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacct |
303 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| | |||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
4265628 |
aagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacct |
4265727 |
T |
|
| Q |
304 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
403 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||| ||| |||| |||||||||||||||||||| |
|
|
| T |
4265728 |
ttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatgg |
4265827 |
T |
|
| Q |
404 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
492 |
Q |
| |
|
| |||| ||| | ||||| |||| |||| ||||||||||||| | ||||| |||||||| | | |||||||||||| ||||||| |
|
|
| T |
4265828 |
tctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccctttg |
4265916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 207 - 445
Target Start/End: Complemental strand, 4572520 - 4572282
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||||||||| || |||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
4572520 |
ccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacctatg |
4572421 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||| |||||||| || ||||||||||| |
|
|
| T |
4572420 |
taaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagatggttt |
4572321 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacat |
445 |
Q |
| |
|
| | ||| || || ||||||||||||| ||||||||| |
|
|
| T |
4572320 |
atctccaacggatggcgatggcgatgttagtcaagacat |
4572282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 210 - 481
Target Start/End: Complemental strand, 4587183 - 4586912
Alignment:
| Q |
210 |
catgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgtca |
309 |
Q |
| |
|
||||||||||| || |||| |||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||| ||||||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
310 |
acactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaac |
409 |
Q |
| |
|
|||||||||||||||||||||| ||||| || ||||||| | |||||||||||||| ||| |||||||| ||||||||| || |||||||||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaac |
4586984 |
T |
|
| Q |
410 |
accactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
481 |
Q |
| |
|
||| || |||||||| ||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4586983 |
tccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4586912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 224 - 455
Target Start/End: Complemental strand, 4562199 - 4561968
Alignment:
| Q |
224 |
tccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataa-cctttgtcaacactgaatacaa |
322 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||||||| | |||||||| | |||||||| |||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
4562199 |
tccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaatacaa |
4562100 |
T |
|
| Q |
323 |
tcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggt |
422 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||| ||| || ||| |
|
|
| T |
4562099 |
tcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaaggatggt |
4562001 |
T |
|
| Q |
423 |
gatggcgatgttactcaagacataccctctctt |
455 |
Q |
| |
|
||||| ||| ||| ||||||| ||| ||||||| |
|
|
| T |
4562000 |
gatggtgatattagtcaagacctacactctctt |
4561968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 4513553 - 4513755
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |||| | | |||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
4513553 |
ccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttg |
4513652 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||| || || |||||||| |
|
|
| T |
4513653 |
ttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggttt |
4513752 |
T |
|
| Q |
407 |
aac |
409 |
Q |
| |
|
||| |
|
|
| T |
4513753 |
aac |
4513755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 224 - 475
Target Start/End: Complemental strand, 4569607 - 4569360
Alignment:
| Q |
224 |
tccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgtcaacactgaatacaat |
323 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
4569607 |
tccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccga----aat |
4569512 |
T |
|
| Q |
324 |
cacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtg |
423 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || |||||||||||||| || ||||||| |
|
|
| T |
4569511 |
cacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaaggtt |
4569412 |
T |
|
| Q |
424 |
atggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
475 |
Q |
| |
|
|||| ||| ||| |||||| || ||||||| | | |||||||||||||| |
|
|
| T |
4569411 |
atggtgatattagtcaagaaattgtctctcttgatgattcaataagaaagaa |
4569360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 207 - 404
Target Start/End: Original strand, 4612292 - 4612489
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||| ||||| ||||||| |||| |||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||| || | |
|
|
| T |
4612292 |
ccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcg |
4612391 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggt |
404 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
4612392 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggt |
4612489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 283 - 443
Target Start/End: Original strand, 4502943 - 4503103
Alignment:
| Q |
283 |
ttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttac |
382 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
383 |
ctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagac |
443 |
Q |
| |
|
||||||||||||||||||||||||||| || | ||||||||||| ||||||| ||||||| |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagac |
4503103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 180 - 406
Target Start/End: Complemental strand, 4471492 - 4471269
Alignment:
| Q |
180 |
atgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttc |
279 |
Q |
| |
|
|||||||| |||||||||| || ||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||| ||||||||| |||||| |
|
|
| T |
4471492 |
atgagtaattttgcaaagacaa---agccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttc |
4471396 |
T |
|
| Q |
280 |
accttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattt |
379 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| || | ||||||||||| ||| || |
|
|
| T |
4471395 |
accttagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactt |
4471296 |
T |
|
| Q |
380 |
tacctttgagaccataccagatggttt |
406 |
Q |
| |
|
|| |||||||||||| ||| ||||||| |
|
|
| T |
4471295 |
taactttgagaccattccaaatggttt |
4471269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 180 - 406
Target Start/End: Complemental strand, 4462785 - 4462562
Alignment:
| Q |
180 |
atgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttc |
279 |
Q |
| |
|
|||||||| |||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||| |||| | |||| |
|
|
| T |
4462785 |
atgagtaattttgcaaagacaa---agccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttc |
4462689 |
T |
|
| Q |
280 |
accttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattt |
379 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| ||| | | ||||||||| ||| || |
|
|
| T |
4462688 |
accttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactt |
4462589 |
T |
|
| Q |
380 |
tacctttgagaccataccagatggttt |
406 |
Q |
| |
|
|| |||||||||||| ||| ||||||| |
|
|
| T |
4462588 |
taactttgagaccattccaaatggttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 209 - 481
Target Start/End: Complemental strand, 4599715 - 4599443
Alignment:
| Q |
209 |
acatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgtc |
308 |
Q |
| |
|
|||||| || ||||||||||| ||| ||||||| ||||||||| ||| | | ||||||||| |||||||||||||||| ||| |||||||||| || |
|
|
| T |
4599715 |
acatgcagtattgattccattaccaattcaaggaaatatcaatctattaatcaaactagcaaagattcttcaccttagaggattttacataaccttcgtg |
4599616 |
T |
|
| Q |
309 |
aacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaa |
408 |
Q |
| |
|
||||| || |||||||||||||| |||||||||||||||||| ||| | | |||||||| ||||||| |||| ||||| || ||||||||||||| |
|
|
| T |
4599615 |
aacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactgatttttccttcgagactattccagatggtttaa |
4599516 |
T |
|
| Q |
409 |
caccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
481 |
Q |
| |
|
| ||| |||| |||||||| |||||||| || |||||| ||||| | | ||||||| ||||| |||||||| |
|
|
| T |
4599515 |
ctccaatagatggtgatggtgatgttacacaggacataaattctctctgtaaatcaatcagaaataacttcct |
4599443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 307 - 492
Target Start/End: Original strand, 4298172 - 4298357
Alignment:
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||| ||| ||| || |||||||||||| | |||| ||||||||| || ||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
492 |
Q |
| |
|
|| ||| ||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttg |
4298357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 369
Target Start/End: Original strand, 4255394 - 4255545
Alignment:
| Q |
206 |
gccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataaccttt |
305 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||||||| ||| || | |||||||||||| ||||| |||| ||| |||| |
|
|
| T |
4255394 |
gccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaagg------------cttt |
4255481 |
T |
|
| Q |
306 |
gtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtt |
369 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
4255482 |
gtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 4497794 - 4497899
Alignment:
| Q |
179 |
gatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttctt |
278 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||| ||||| | |||||||||| || |||||||||||||||||||||||| ||||| |||||| ||| |
|
|
| T |
4497794 |
gatgagtaactttg--aagagaaa-aagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattactt |
4497890 |
T |
|
| Q |
279 |
caccttaga |
287 |
Q |
| |
|
||||||||| |
|
|
| T |
4497891 |
caccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 350
Target Start/End: Original strand, 4483534 - 4483568
Alignment:
| Q |
316 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
4483568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 350
Target Start/End: Complemental strand, 4496222 - 4496189
Alignment:
| Q |
317 |
atacaatcacaaacgtttgctcaaatcaagaggt |
350 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
4496222 |
atacaatgacaaacgtttgctcaaatcaagaggt |
4496189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 4472660 - 4472616
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaat |
251 |
Q |
| |
|
|||||||| ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
4472660 |
ccacatgcagtgttgattccatgtccaccccaaggccatatcaat |
4472616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 4493459 - 4493415
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaat |
251 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||| ||||||||| |
|
|
| T |
4493459 |
ccacatgcagtgttgattccatttccagctcaaggtcatatcaat |
4493415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 207 - 482
Target Start/End: Complemental strand, 1282987 - 1282712
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||| | |||||||||| | |||||||||||||||||| |||||||||||| |
|
|
| T |
1282987 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttg |
1282888 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
| || |||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| |||||| ||||| ||||||||| | |
|
|
| T |
1282887 |
ttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtct |
1282788 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
482 |
Q |
| |
|
|||| |||||||||||||||| ||||||| |||| | |||| ||||||| |||||| ||||||||||| |||||| |
|
|
| T |
1282787 |
aacatcactagaaggtgatggtgatgttagtcaacatgtaccttctctttgtcaatctataagaaagaatttcctt |
1282712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 35776316 - 35776272
Alignment:
| Q |
291 |
tttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
335 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35776316 |
tttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35776272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 35842123 - 35842079
Alignment:
| Q |
291 |
tttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
335 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35842123 |
tttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35842079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 35854631 - 35854587
Alignment:
| Q |
291 |
tttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
335 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35854631 |
tttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35854587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 35869240 - 35869196
Alignment:
| Q |
291 |
tttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
335 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35869240 |
tttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35869196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 35759888 - 35759847
Alignment:
| Q |
294 |
cacataacctttgtcaacactgaatacaatcacaaacgtttg |
335 |
Q |
| |
|
|||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35759888 |
cacataacctttgtgaacactgaattcaaccacaaacgtttg |
35759847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 208 - 491
Target Start/End: Complemental strand, 1311 - 1031
Alignment:
| Q |
208 |
cacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgt |
307 |
Q |
| |
|
||||||||||||| ||||||| |||| |||||||||||||||||||||||| | |||||||||| || ||||||||||||||| ||| |||||| ||| |
|
|
| T |
1311 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1212 |
T |
|
| Q |
308 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttta |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| || |
|
|
| T |
1211 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1112 |
T |
|
| Q |
408 |
acaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
491 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1111 |
acaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 1e-76; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 208 - 491
Target Start/End: Complemental strand, 1676074 - 1675794
Alignment:
| Q |
208 |
cacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgt |
307 |
Q |
| |
|
||||||||||||| ||||||| |||| |||||||||||||||||||||||| | |||||||||| || ||||||||||||||| ||| |||||| ||| |
|
|
| T |
1676074 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1675975 |
T |
|
| Q |
308 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttta |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| || |
|
|
| T |
1675974 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1675875 |
T |
|
| Q |
408 |
acaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
491 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1675874 |
acaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1675794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 144 - 405
Target Start/End: Original strand, 20862326 - 20862582
Alignment:
| Q |
144 |
tcactttaacagtgcataacaaaaaataaaccagggatgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggcc |
243 |
Q |
| |
|
||||||||||| | ||||| |||||| |||||| ||||||||| ||||| ||| || | |||||||| ||||| | ||||| |||||||||||| | |
|
|
| T |
20862326 |
tcactttaacatttcataagaaaaaa--aaccagagatgagtaattttgctgagaaaa---aaccacatgcagtgttaactccatatccacttcaaggtc |
20862420 |
T |
|
| Q |
244 |
atatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatc |
343 |
Q |
| |
|
||||||||||| |||| | |||||||||| | |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| ||||| || || |
|
|
| T |
20862421 |
atatcaatccaatgttaaaactagcaaaactacttcaccttagaggcttttacataacatttgtcaatactgaatacaatcacaaacgcttgcttaagtc |
20862520 |
T |
|
| Q |
344 |
aagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtt |
405 |
Q |
| |
|
|| ||| || |||||||||||||| ||| ||| |||||||||| | |||||||||| |
|
|
| T |
20862521 |
aatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccagatggtt |
20862582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 491
Target Start/End: Original strand, 16685029 - 16685145
Alignment:
| Q |
375 |
gattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaaga |
474 |
Q |
| |
|
||||||| ||||||||| || ||| |||||||| | ||| || |||||||||||||||| ||||||||||| | |||||| | ||||||| ||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
475 |
acttccttcagcccttt |
491 |
Q |
| |
|
||||||| || |||||| |
|
|
| T |
16685129 |
acttcctccaacccttt |
16685145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 135; Significance: 4e-70; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 207 - 484
Target Start/End: Complemental strand, 2378 - 2098
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2378 |
ccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
2279 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || |||||||| |
|
|
| T |
2278 |
tcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggttt |
2179 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcg---atgttactcaagacataccctctctttctcaatcaataagaaagaacttccttca |
484 |
Q |
| |
|
||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||| ||||||||||| |
|
|
| T |
2178 |
aactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttca |
2098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 334
Target Start/End: Original strand, 2994 - 3083
Alignment:
| Q |
245 |
tatcaatccattgttgatactagcaaaatttcttcaccttagaggcttt-cacataacctttgtcaacactgaatacaatcacaaacgttt |
334 |
Q |
| |
|
||||||||||||||| | ||| ||||||||| || || ||||||||||| |||||||| ||| || ||| |||||||||| |||||||||| |
|
|
| T |
2994 |
tatcaatccattgttcaaactggcaaaatttatttac-ttagaggcttttcacataacatttttccacaatgaatacaattacaaacgttt |
3083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 131; Significance: 9e-68; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 207 - 484
Target Start/End: Original strand, 2025 - 2305
Alignment:
| Q |
207 |
ccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacctttg |
306 |
Q |
| |
|
||||||| |||| ||||||||| |||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2025 |
ccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
2124 |
T |
|
| Q |
307 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
406 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || |||||||| |
|
|
| T |
2125 |
tcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggttt |
2224 |
T |
|
| Q |
407 |
aacaccactagaaggtgatggcg---atgttactcaagacataccctctctttctcaatcaataagaaagaacttccttca |
484 |
Q |
| |
|
||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||| ||||||||||| |
|
|
| T |
2225 |
aactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttca |
2305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 204 - 492
Target Start/End: Complemental strand, 3088302 - 3088014
Alignment:
| Q |
204 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacct |
303 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| | |||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
3088302 |
aagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataacct |
3088203 |
T |
|
| Q |
304 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
403 |
Q |
| |
|
||||||| || |||||||||||||| |||||||| |||||||||||| ||| | ||||||||||| ||||||| ||||||||| || | |||||| |
|
|
| T |
3088202 |
ttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagatgg |
3088103 |
T |
|
| Q |
404 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
492 |
Q |
| |
|
| |||| ||| | |||||| |||| ||||||| ||||||| | | ||||||| ||||||| | ||||||||||| |||| ||||||| |
|
|
| T |
3088102 |
tctaactccaatggaaggtaatggtgatgttagtcaagacttggcatctctttgtcaatcagttggaaagaacttcattcaaccctttg |
3088014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 204 - 492
Target Start/End: Complemental strand, 24104652 - 24104364
Alignment:
| Q |
204 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaatttcttcaccttagaggctttcacataacct |
303 |
Q |
| |
|
||||| |||||||||||||||||| |||| ||||||| ||||||||| ||||||| | ||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
24104652 |
aagccgcatgctgtgttgattccagctccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataacct |
24104553 |
T |
|
| Q |
304 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
403 |
Q |
| |
|
| || ||||| ||||||||||||||||| |||||| ||||||||| | ||| | ||||||||||| |||| |||| ||||||||||||||||||||| |
|
|
| T |
24104552 |
tcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatgg |
24104453 |
T |
|
| Q |
404 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
492 |
Q |
| |
|
| |||| ||| | ||||| |||| |||||||||||||||||| | ||||| |||||||| | | |||||||||||||||||||| |
|
|
| T |
24104452 |
tctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccctttg |
24104364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 26903670 - 26903638
Alignment:
| Q |
300 |
acctttgtcaacactgaatacaatcacaaacgt |
332 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
26903670 |
acctttgttaacactgaatacaatcacaaacgt |
26903638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 3310 - 3379
Alignment:
| Q |
421 |
gtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctt |
490 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||| ||| |||||||||| |
|
|
| T |
3310 |
gtgatggtgatgttactcaagacataccctctcttgttcaatctataagaacgaatttctttcagccctt |
3379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 1349579 - 1349627
Alignment:
| Q |
295 |
acataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatc |
343 |
Q |
| |
|
||||||| |||||||||||||||| ||| |||||||| || |||||||| |
|
|
| T |
1349579 |
acataacatttgtcaacactgaattcaaccacaaacgcttactcaaatc |
1349627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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