View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_low_64 (Length: 323)
Name: NF15745_low_64
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_low_64 |
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Alignment Details
Target: chr4 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 27774773 - 27775084
Alignment:
| Q |
1 |
actctcctcagctgagtcgcccaatttcacatcatgtactttctcaggtaagcaaacgggaagggagtcatccctcagcatctgcaatataaaaatcaat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774773 |
actctcctcagctgagtcgcccaatttcacatcatgtactttctcaggtaagcaaacaggaagggagtcatccctcagcatctgcaatataaaaatcaat |
27774872 |
T |
|
| Q |
101 |
gtaaggaaaaatatcttagagtagatgcaaatgttataatttgtagtaaaaaacaacaatagcatgtctgtttgatataattgaaaacaaagaagataaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774873 |
gtaaggaaaaatatcttagagtagatgcaaatgttatcatttgtagtaaaaaacaacaatagcatgtctgtttgatataattgaaaacaaagaagataaa |
27774972 |
T |
|
| Q |
201 |
caacagccgtagttatcctggtggttggaaaataaagatgtattctaaatttaacatgtcaaaagataaaaatgtaaaagataaatgatgtctgataagc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774973 |
caacagccgtagttatcctggtggttggaaaataaagatgtattctaaatttaacatgtcaaaagataaaaatgtaaaagataaatgatgtctgataagc |
27775072 |
T |
|
| Q |
301 |
aaacacaggttc |
312 |
Q |
| |
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|||||||||||| |
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| T |
27775073 |
aaacacaggttc |
27775084 |
T |
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