View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_low_71 (Length: 306)
Name: NF15745_low_71
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_low_71 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 16 - 297
Target Start/End: Original strand, 29210608 - 29210894
Alignment:
| Q |
16 |
tttttattttgtgctttatatacctaccaaccacaaggtggacaactgacaaggacaagggtcgcatgatccc-----accgatcctttgtatcattttg |
110 |
Q |
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| T |
29210608 |
tttttattttgtgctttatatacctaccaaccacaaggtggacaactgacaaggacaagggtcgcatgatccccacccaccgatcctttgtatcattttg |
29210707 |
T |
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| Q |
111 |
aaaaagtgattcaaactccatggaccatgatctatattatcatcactttaatttgtcaagtgaataaatagtatagtagtatatactatttatgttattt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29210708 |
aaaaagtgattcaaactccatggaccatgatctatattatcatcactttaatttgtcaagtgaataaatagtatagtagtatatactatttatgttattt |
29210807 |
T |
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| Q |
211 |
aagcacattacacacacatactaagtataattctaattaaataaacccaagcctgccaaaatagaatccaacgcagcgcattcatct |
297 |
Q |
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| T |
29210808 |
aagcacattacacacacatactaagtataattctaattaaataaacccaagcctgccaaaatagaatccaacgcagcgcattcatct |
29210894 |
T |
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