View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15745_low_92 (Length: 257)

Name: NF15745_low_92
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15745_low_92
NF15745_low_92
[»] chr4 (66 HSPs)
chr4 (1-254)||(31529800-31530053)
chr4 (1-156)||(7182238-7182393)
chr4 (1-156)||(38317276-38317431)
chr4 (1-156)||(41363859-41364014)
chr4 (1-156)||(16535570-16535725)
chr4 (3-130)||(37756762-37756889)
chr4 (1-134)||(904098-904231)
chr4 (1-156)||(38365908-38366062)
chr4 (1-134)||(13270321-13270453)
chr4 (1-129)||(20533833-20533961)
chr4 (1-156)||(52594671-52594826)
chr4 (1-134)||(41844338-41844469)
chr4 (1-134)||(48830861-48830995)
chr4 (1-150)||(24279799-24279948)
chr4 (1-133)||(56504515-56504647)
chr4 (1-115)||(17873116-17873231)
chr4 (1-156)||(36151417-36151567)
chr4 (1-151)||(21296152-21296297)
chr4 (1-156)||(32948563-32948719)
chr4 (1-132)||(13269856-13269987)
chr4 (1-150)||(3127058-3127207)
chr4 (1-134)||(47669709-47669844)
chr4 (24-134)||(32651333-32651443)
chr4 (1-150)||(24287393-24287542)
chr4 (5-156)||(54806354-54806500)
chr4 (35-156)||(50641936-50642055)
chr4 (1-134)||(17622518-17622644)
chr4 (1-156)||(35959077-35959230)
chr4 (44-156)||(32060568-32060680)
chr4 (1-87)||(49404670-49404756)
chr4 (1-130)||(21730372-21730500)
chr4 (1-156)||(46176974-46177129)
chr4 (58-156)||(31187198-31187296)
chr4 (1-115)||(54205756-54205873)
chr4 (163-237)||(22435445-22435519)
chr4 (166-230)||(22435345-22435409)
chr4 (1-156)||(28175511-28175666)
chr4 (169-247)||(29821324-29821402)
chr4 (165-247)||(43404587-43404669)
chr4 (1-156)||(16318496-16318651)
chr4 (1-156)||(21081224-21081384)
chr4 (20-156)||(52636640-52636776)
chr4 (1-52)||(23708129-23708180)
chr4 (29-115)||(30765622-30765708)
chr4 (163-229)||(35297573-35297639)
chr4 (1-115)||(45971482-45971594)
chr4 (163-247)||(29821436-29821521)
chr4 (166-222)||(13837839-13837895)
chr4 (1-156)||(12708881-12709036)
chr4 (1-156)||(49668151-49668305)
chr4 (119-156)||(21357987-21358024)
chr4 (64-133)||(45022829-45022898)
chr4 (1-156)||(29114280-29114436)
chr4 (1-156)||(38136881-38137036)
chr4 (1-155)||(49936399-49936549)
chr4 (62-156)||(56426816-56426910)
chr4 (200-237)||(11392392-11392429)
chr4 (1-42)||(30307366-30307407)
chr4 (119-156)||(31530242-31530279)
chr4 (87-156)||(33500399-33500468)
chr4 (121-150)||(37662550-37662579)
chr4 (62-115)||(48620200-48620252)
chr4 (50-115)||(53299873-53299938)
chr4 (92-156)||(32866866-32866930)
chr4 (175-247)||(35297471-35297543)
chr4 (62-114)||(42649764-42649816)
[»] chr5 (57 HSPs)
chr5 (1-156)||(35700939-35701094)
chr5 (1-134)||(38928749-38928882)
chr5 (1-134)||(41694878-41695011)
chr5 (1-156)||(27480219-27480372)
chr5 (2-134)||(38302400-38302533)
chr5 (1-134)||(2020882-2021014)
chr5 (1-129)||(10295389-10295517)
chr5 (1-134)||(1658078-1658211)
chr5 (1-134)||(4649034-4649167)
chr5 (1-134)||(32760658-32760791)
chr5 (1-115)||(26149523-26149637)
chr5 (1-134)||(17092799-17092931)
chr5 (1-147)||(41638243-41638388)
chr5 (1-156)||(37508438-37508591)
chr5 (1-125)||(25026838-25026956)
chr5 (1-130)||(38120222-38120351)
chr5 (5-110)||(35868758-35868860)
chr5 (169-247)||(20986538-20986616)
chr5 (21-156)||(43496386-43496522)
chr5 (5-96)||(25598837-25598928)
chr5 (162-247)||(3137704-3137789)
chr5 (163-247)||(5396354-5396437)
chr5 (1-156)||(5772767-5772921)
chr5 (1-156)||(35683520-35683675)
chr5 (2-156)||(35708801-35708955)
chr5 (1-97)||(6491123-6491218)
chr5 (163-247)||(34394655-34394739)
chr5 (32-156)||(15739408-15739533)
chr5 (164-237)||(20986427-20986500)
chr5 (1-156)||(32824542-32824696)
chr5 (64-149)||(35704596-35704681)
chr5 (86-150)||(41923062-41923127)
chr5 (1-109)||(12096834-12096938)
chr5 (175-230)||(5998631-5998686)
chr5 (50-108)||(6491418-6491476)
chr5 (83-140)||(1176061-1176118)
chr5 (8-105)||(32750571-32750668)
chr5 (163-247)||(3137824-3137908)
chr5 (8-125)||(15058498-15058618)
chr5 (4-156)||(9684831-9684983)
chr5 (1-156)||(10437865-10438020)
chr5 (4-46)||(1978195-1978237)
chr5 (1-115)||(10842965-10843078)
chr5 (166-247)||(35545683-35545759)
chr5 (87-151)||(3676642-3676706)
chr5 (5-148)||(14570091-14570234)
chr5 (21-125)||(15061973-15062081)
chr5 (183-237)||(5998539-5998593)
chr5 (50-115)||(34063724-34063790)
chr5 (1-115)||(39649491-39649605)
chr5 (119-156)||(1658395-1658432)
chr5 (74-111)||(1978123-1978160)
chr5 (87-156)||(6632531-6632599)
chr5 (175-220)||(16183928-16183973)
chr5 (1-106)||(17668189-17668293)
chr5 (87-156)||(18670912-18670981)
chr5 (8-115)||(21916347-21916454)
[»] chr1 (78 HSPs)
chr1 (1-156)||(27499863-27500018)
chr1 (1-134)||(33991442-33991575)
chr1 (2-129)||(13255250-13255377)
chr1 (1-134)||(1688264-1688396)
chr1 (1-156)||(47905736-47905891)
chr1 (1-130)||(2925981-2926110)
chr1 (1-134)||(23871510-23871643)
chr1 (1-156)||(12293689-12293844)
chr1 (1-156)||(17688222-17688374)
chr1 (1-156)||(40707243-40707400)
chr1 (13-156)||(38794849-38794992)
chr1 (1-156)||(51246610-51246765)
chr1 (1-134)||(26757202-26757336)
chr1 (1-155)||(39889705-39889859)
chr1 (1-132)||(42488674-42488805)
chr1 (5-156)||(1523472-1523625)
chr1 (1-156)||(26940485-26940640)
chr1 (3-134)||(42162102-42162233)
chr1 (1-156)||(43571999-43572153)
chr1 (1-134)||(30538796-30538929)
chr1 (1-115)||(15463740-15463854)
chr1 (1-134)||(8156385-8156519)
chr1 (1-150)||(11017484-11017633)
chr1 (1-156)||(7401573-7401729)
chr1 (1-149)||(13061443-13061595)
chr1 (1-156)||(50247474-50247629)
chr1 (1-134)||(896542-896675)
chr1 (5-132)||(938289-938417)
chr1 (35-134)||(32295545-32295644)
chr1 (18-115)||(17675118-17675215)
chr1 (1-156)||(45565008-45565163)
chr1 (2-156)||(52073496-52073650)
chr1 (1-134)||(2175228-2175363)
chr1 (1-66)||(47206470-47206535)
chr1 (1-156)||(49102999-49103153)
chr1 (1-134)||(50476447-50476572)
chr1 (52-134)||(14152601-14152683)
chr1 (1-134)||(28773425-28773559)
chr1 (5-156)||(17556547-17556697)
chr1 (1-67)||(7963942-7964008)
chr1 (4-156)||(36886749-36886900)
chr1 (1-156)||(36269622-36269777)
chr1 (19-149)||(50586934-50587063)
chr1 (74-156)||(28718911-28718994)
chr1 (1-156)||(29091966-29092120)
chr1 (1-115)||(5584425-5584539)
chr1 (1-43)||(32299086-32299128)
chr1 (98-156)||(39179250-39179308)
chr1 (1-134)||(7915414-7915547)
chr1 (50-134)||(5970526-5970610)
chr1 (1-57)||(14153090-14153145)
chr1 (1-134)||(39508669-39508804)
chr1 (62-148)||(50599069-50599155)
chr1 (1-115)||(27102871-27102985)
chr1 (1-99)||(28748137-28748234)
chr1 (1-115)||(28848836-28848949)
chr1 (1-114)||(41432813-41432923)
chr1 (1-115)||(46001487-46001600)
chr1 (34-115)||(34918811-34918892)
chr1 (2-46)||(9595564-9595608)
chr1 (1-113)||(23412000-23412111)
chr1 (166-225)||(11619471-11619530)
chr1 (89-156)||(25708500-25708567)
chr1 (1-115)||(27255129-27255243)
chr1 (29-96)||(50402704-50402771)
chr1 (50-115)||(19403477-19403543)
chr1 (1-115)||(33324554-33324667)
chr1 (1-115)||(43036360-43036472)
chr1 (50-115)||(5883699-5883763)
chr1 (119-156)||(9595780-9595817)
chr1 (1-46)||(30543400-30543445)
chr1 (119-156)||(45565348-45565385)
chr1 (200-249)||(48541250-48541299)
chr1 (177-230)||(50193991-50194044)
chr1 (70-102)||(23556434-23556466)
chr1 (94-134)||(47206538-47206577)
chr1 (50-125)||(47742441-47742517)
chr1 (119-155)||(50247815-50247851)
[»] chr7 (58 HSPs)
chr7 (1-156)||(3658558-3658713)
chr7 (1-156)||(33406679-33406834)
chr7 (1-130)||(23620840-23620969)
chr7 (1-149)||(34652098-34652246)
chr7 (1-134)||(3571806-3571939)
chr7 (1-132)||(28437589-28437721)
chr7 (1-156)||(5968090-5968244)
chr7 (1-156)||(36747175-36747331)
chr7 (5-156)||(47276053-47276205)
chr7 (1-115)||(42620399-42620512)
chr7 (1-156)||(33810259-33810414)
chr7 (1-134)||(33113686-33113821)
chr7 (1-130)||(19644206-19644335)
chr7 (1-156)||(7667211-7667367)
chr7 (5-131)||(41002302-41002427)
chr7 (1-134)||(43188771-43188904)
chr7 (1-148)||(46745634-46745780)
chr7 (1-134)||(46449076-46449208)
chr7 (1-105)||(43778623-43778727)
chr7 (172-247)||(27385915-27385990)
chr7 (1-156)||(38505381-38505536)
chr7 (1-149)||(44719979-44720123)
chr7 (1-156)||(15748996-15749151)
chr7 (1-66)||(19644137-19644202)
chr7 (175-247)||(16648899-16648971)
chr7 (175-247)||(17623260-17623332)
chr7 (1-115)||(38137861-38137975)
chr7 (1-156)||(6746616-6746768)
chr7 (163-224)||(33491173-33491234)
chr7 (160-236)||(6980849-6980924)
chr7 (73-150)||(7391526-7391603)
chr7 (73-134)||(23325720-23325781)
chr7 (1-156)||(19791566-19791724)
chr7 (167-230)||(6980958-6981021)
chr7 (87-133)||(42113090-42113136)
chr7 (34-130)||(18788805-18788900)
chr7 (4-149)||(34399087-34399234)
chr7 (161-229)||(42494872-42494940)
chr7 (1-115)||(42219958-42220072)
chr7 (1-106)||(14676152-14676256)
chr7 (8-156)||(42854127-42854274)
chr7 (75-115)||(42471334-42471374)
chr7 (1-156)||(16805614-16805769)
chr7 (1-103)||(45940447-45940549)
chr7 (73-156)||(30183727-30183812)
chr7 (1-115)||(31891206-31891320)
chr7 (1-103)||(43348276-43348377)
chr7 (5-55)||(43665199-43665249)
chr7 (185-231)||(48583405-48583451)
chr7 (119-156)||(28437366-28437403)
chr7 (177-230)||(42494776-42494829)
chr7 (87-156)||(6635711-6635782)
chr7 (119-147)||(19644514-19644542)
chr7 (50-130)||(23550695-23550774)
chr7 (87-115)||(30080892-30080920)
chr7 (83-115)||(32851964-32851996)
chr7 (83-115)||(32852074-32852106)
chr7 (119-155)||(35902075-35902111)
[»] chr8 (41 HSPs)
chr8 (1-134)||(36906088-36906221)
chr8 (1-156)||(34272393-34272549)
chr8 (1-156)||(37659578-37659733)
chr8 (1-156)||(6697-6853)
chr8 (1-149)||(36102937-36103085)
chr8 (9-134)||(4734551-4734676)
chr8 (5-156)||(3404625-3404775)
chr8 (1-134)||(2474813-2474946)
chr8 (1-134)||(25033281-25033414)
chr8 (1-134)||(34304617-34304749)
chr8 (1-134)||(13865139-13865271)
chr8 (45-150)||(1942124-1942228)
chr8 (1-134)||(29611893-29612025)
chr8 (1-134)||(31297395-31297527)
chr8 (1-156)||(43733167-43733322)
chr8 (40-156)||(34349602-34349719)
chr8 (163-237)||(3647479-3647553)
chr8 (1-130)||(39193836-39193965)
chr8 (1-156)||(79660-79816)
chr8 (163-247)||(18183016-18183100)
chr8 (5-156)||(21173909-21174059)
chr8 (1-53)||(40985121-40985173)
chr8 (1-112)||(1839867-1839977)
chr8 (16-115)||(6839844-6839943)
chr8 (27-156)||(40999241-40999369)
chr8 (62-134)||(1840313-1840385)
chr8 (207-247)||(7251522-7251562)
chr8 (1-156)||(23932605-23932759)
chr8 (1-156)||(26772689-26772843)
chr8 (1-115)||(28169797-28169911)
chr8 (175-237)||(43417523-43417585)
chr8 (87-156)||(31149803-31149872)
chr8 (89-156)||(3635611-3635678)
chr8 (196-246)||(3647390-3647440)
chr8 (87-156)||(14581880-14581949)
chr8 (119-156)||(34148405-34148442)
chr8 (50-115)||(34335962-34336027)
chr8 (206-247)||(44365634-44365675)
chr8 (62-150)||(7080390-7080478)
chr8 (200-236)||(31470839-31470875)
chr8 (72-156)||(31598537-31598620)
[»] chr2 (63 HSPs)
chr2 (1-156)||(3038993-3039150)
chr2 (1-156)||(18018643-18018798)
chr2 (1-134)||(30312452-30312585)
chr2 (1-156)||(12964019-12964174)
chr2 (1-156)||(31550296-31550451)
chr2 (1-156)||(18780261-18780418)
chr2 (1-144)||(1725800-1725944)
chr2 (1-156)||(3119898-3120052)
chr2 (1-132)||(8555823-8555954)
chr2 (1-134)||(4041865-4041998)
chr2 (1-134)||(32243376-32243509)
chr2 (1-134)||(36567325-36567457)
chr2 (1-156)||(8991010-8991163)
chr2 (1-134)||(18826273-18826412)
chr2 (1-156)||(10165294-10165449)
chr2 (1-128)||(25960657-25960784)
chr2 (1-134)||(8410977-8411111)
chr2 (5-155)||(14008379-14008529)
chr2 (1-116)||(19382797-19382911)
chr2 (1-134)||(13765986-13766118)
chr2 (1-134)||(38293785-38293922)
chr2 (36-134)||(44137053-44137151)
chr2 (1-134)||(38023493-38023625)
chr2 (1-114)||(44020275-44020388)
chr2 (5-135)||(18561908-18562039)
chr2 (5-134)||(725856-725986)
chr2 (1-78)||(40357414-40357491)
chr2 (1-79)||(31899390-31899468)
chr2 (1-156)||(4003307-4003462)
chr2 (1-109)||(6711876-6711987)
chr2 (1-156)||(16519136-16519290)
chr2 (14-156)||(16625844-16625983)
chr2 (2-139)||(36030710-36030846)
chr2 (163-231)||(18182492-18182560)
chr2 (1-134)||(5322166-5322298)
chr2 (1-156)||(11514923-11515078)
chr2 (1-156)||(15555393-15555547)
chr2 (163-230)||(18182601-18182668)
chr2 (74-156)||(11522286-11522368)
chr2 (27-150)||(32761348-32761470)
chr2 (1-115)||(1364753-1364867)
chr2 (13-150)||(6656003-6656140)
chr2 (50-115)||(43333466-43333531)
chr2 (73-156)||(39180959-39181041)
chr2 (62-156)||(12941909-12942002)
chr2 (1-115)||(15803109-15803222)
chr2 (1-115)||(21834861-21834975)
chr2 (169-230)||(532168-532229)
chr2 (175-247)||(1355977-1356052)
chr2 (1-156)||(34757484-34757639)
chr2 (1-67)||(13767397-13767463)
chr2 (1-115)||(31082736-31082849)
chr2 (1-43)||(43334799-43334841)
chr2 (3-44)||(35812338-35812379)
chr2 (50-115)||(36574517-36574582)
chr2 (89-156)||(26905683-26905750)
chr2 (75-150)||(44656848-44656923)
chr2 (87-156)||(21626003-21626072)
chr2 (1-46)||(42644646-42644691)
chr2 (1-115)||(9087745-9087856)
chr2 (177-237)||(10413471-10413530)
chr2 (124-156)||(18781643-18781675)
chr2 (63-115)||(30072517-30072569)
[»] chr3 (63 HSPs)
chr3 (1-150)||(49860721-49860870)
chr3 (1-134)||(41962024-41962155)
chr3 (1-134)||(3043165-3043298)
chr3 (1-134)||(36796324-36796457)
chr3 (1-135)||(49683048-49683182)
chr3 (1-134)||(24242139-24242272)
chr3 (1-134)||(55439485-55439618)
chr3 (1-156)||(30131933-30132087)
chr3 (1-156)||(47789493-47789648)
chr3 (1-134)||(43237192-43237324)
chr3 (1-134)||(46312468-46312601)
chr3 (2-134)||(33982767-33982899)
chr3 (1-130)||(45555537-45555667)
chr3 (1-134)||(38515152-38515284)
chr3 (17-156)||(34306026-34306165)
chr3 (1-144)||(17642481-17642623)
chr3 (1-156)||(38526037-38526187)
chr3 (1-144)||(47714720-47714862)
chr3 (5-134)||(43007547-43007676)
chr3 (1-156)||(39499074-39499232)
chr3 (1-134)||(44412202-44412335)
chr3 (1-128)||(23163432-23163557)
chr3 (1-156)||(31178293-31178447)
chr3 (1-156)||(2420544-2420704)
chr3 (1-156)||(46017107-46017260)
chr3 (5-134)||(25428571-25428698)
chr3 (1-156)||(32858708-32858864)
chr3 (3-156)||(47434368-47434515)
chr3 (1-156)||(3537087-3537242)
chr3 (1-156)||(35282968-35283121)
chr3 (47-134)||(42583364-42583451)
chr3 (1-156)||(29623115-29623270)
chr3 (164-247)||(53299812-53299896)
chr3 (166-247)||(26960806-26960887)
chr3 (57-156)||(53620168-53620267)
chr3 (169-247)||(26960922-26961000)
chr3 (1-156)||(1132972-1133128)
chr3 (50-156)||(3706984-3707091)
chr3 (87-156)||(49183571-49183640)
chr3 (170-230)||(16205706-16205766)
chr3 (1-67)||(48370227-48370292)
chr3 (1-46)||(24588330-24588375)
chr3 (1-137)||(50948103-50948240)
chr3 (1-134)||(40118931-40119069)
chr3 (64-156)||(54126162-54126253)
chr3 (168-231)||(53299701-53299764)
chr3 (78-156)||(18257796-18257874)
chr3 (1-115)||(33944687-33944800)
chr3 (1-156)||(15499346-15499500)
chr3 (175-219)||(2323162-2323205)
chr3 (1-45)||(11040875-11040919)
chr3 (49-156)||(27921841-27921951)
chr3 (8-135)||(39478006-39478134)
chr3 (18-148)||(49860574-49860703)
chr3 (160-231)||(22616632-22616703)
chr3 (200-247)||(25390220-25390267)
chr3 (200-247)||(48342300-48342347)
chr3 (90-156)||(52620951-52621017)
chr3 (161-230)||(30675000-30675069)
chr3 (50-115)||(30995791-30995856)
chr3 (62-156)||(39115065-39115161)
chr3 (1-46)||(44979408-44979453)
chr3 (1-37)||(41677504-41677540)
[»] chr6 (29 HSPs)
chr6 (1-134)||(29241880-29242013)
chr6 (9-156)||(24734766-24734908)
chr6 (1-156)||(26574442-26574592)
chr6 (1-134)||(5825234-5825366)
chr6 (1-156)||(31345417-31345572)
chr6 (1-130)||(1029198-1029327)
chr6 (1-156)||(26481178-26481329)
chr6 (1-134)||(4909962-4910094)
chr6 (1-156)||(34914506-34914660)
chr6 (1-79)||(23095175-23095253)
chr6 (2-115)||(14275906-14276018)
chr6 (1-156)||(26713742-26713897)
chr6 (78-156)||(2365721-2365799)
chr6 (162-247)||(15057099-15057184)
chr6 (1-156)||(1567160-1567315)
chr6 (169-247)||(28606555-28606633)
chr6 (169-246)||(7837652-7837729)
chr6 (175-247)||(28606449-28606519)
chr6 (175-246)||(7840994-7841065)
chr6 (1-156)||(32719423-32719577)
chr6 (62-108)||(15615594-15615640)
chr6 (1-109)||(13380467-13380575)
chr6 (163-198)||(14292088-14292123)
chr6 (10-59)||(2576741-2576790)
chr6 (169-237)||(7841104-7841172)
chr6 (199-231)||(16193756-16193788)
chr6 (94-134)||(23095253-23095293)
chr6 (163-231)||(25070157-25070225)
chr6 (63-115)||(28551994-28552046)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-133)||(35502-35633)
[»] scaffold0952 (1 HSPs)
scaffold0952 (1-134)||(3718-3852)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-144)||(29-174)
scaffold1562 (119-156)||(359-396)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-144)||(2419-2564)
scaffold1158 (119-156)||(2197-2234)
[»] scaffold0636 (1 HSPs)
scaffold0636 (1-130)||(8306-8435)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-149)||(2070-2217)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-155)||(82675-82830)
[»] scaffold0013 (1 HSPs)
scaffold0013 (36-134)||(107761-107858)
[»] scaffold0717 (2 HSPs)
scaffold0717 (1-66)||(1548-1612)
scaffold0717 (119-156)||(1798-1835)
[»] scaffold1163 (1 HSPs)
scaffold1163 (52-156)||(1937-2041)
[»] scaffold0059 (2 HSPs)
scaffold0059 (36-115)||(67817-67896)
scaffold0059 (36-115)||(75922-76001)
[»] scaffold0020 (2 HSPs)
scaffold0020 (163-247)||(1742-1825)
scaffold0020 (164-247)||(1629-1712)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-115)||(29165-29278)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-46)||(74737-74782)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-105)||(243-346)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 31530053 - 31529800
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  31530053 atacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccgatgtcttctatttcttccac 31529954  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaaccttaaggggtagcactttggtgacattggggtgccaatttcatg 200  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31529953 ttgctccttccttttctccaaaaccttcccctcctctcccctccaaactctcaaaccttaaggggtagcactttggtgacattgaggtgccaatttcatg 31529854  T
Q  201 tgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaactatgat 254  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31529853 tgatattggtcaaccacaatgtcacaagtgtgcaaaaggacaaaaaactatgat 31529800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7182238 - 7182393
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  7182238 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaagattaacctccaaagctctctcctctcaatgtcttctatttcttccac 7182337  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | ||||||||||||||||  |||||||||||||| |||||    
T  7182338 ttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaac 7182393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 38317276 - 38317431
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38317276 atacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 38317375  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | |||||||||| |||||  |||||||| ||||| |||||    
T  38317376 ttgctccttccttttttccaaaaccctctcctcccctcccctcccaactcccaaac 38317431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41363859 - 41364014
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41363859 atacaatttttgagttcccccacatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 41363958  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | ||||||| | ||||||  |||||||||||||| |||||    
T  41363959 ttgctccttccttttttccaaaaccgttccctcccctcccctccaaactcccaaac 41364014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16535725 - 16535570
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16535725 atacaattttttagttcccccaaatgagggatattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 16535626  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | | ||||||||||||||| ||||||| |||||| |||||    
T  16535625 ttgctccttccttttttcccaaaccctcccctcctctcccctctaaactcccaaac 16535570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 37756762 - 37756889
Alignment:
Q  3 acaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccactt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37756762 acaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccactt 37756861  T
Q  103 gctccttccttttctgcaaaaccctccc 130  Q
    ||||||||||||| | ||||| ||||||    
T  37756862 gctccttccttttttccaaaatcctccc 37756889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 904231 - 904098
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  904231 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccgaatgtcttctatttcttccac 904132  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| |  |||||||||||||||    
T  904131 ttgctccttctttttttctaaaaccctcccctcc 904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 38366062 - 38365908
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  38366062 atacaatttttgagttcccc-aaatgagagggattttttattatgagtaaaaaattaacctccaaagtcctctccttccaatgtcttctatttcttccac 38365964  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| |  ||||| |||||||||  |||||||||||||| |||||    
T  38365963 ttgctccttccttttttctaaaactctcccctcccctcccctccaaactcccaaac 38365908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 13270321 - 13270453
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  13270321 atacaatttttgaattcccc-aaatgagggggattttttatcatgagtaaaaaattaacctccaaagccctctactcccaatgtcttctatttcttccac 13270419  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  13270420 ttgctccttccttttttccaaaaccctcccctcc 13270453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 20533961 - 20533833
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  20533961 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagtcttctcctcccaatgtcttctatttcttccac 20533862  T
Q  101 ttgctccttccttttctgcaaaaccctcc 129  Q
    || |||||||||||| | |||||||||||    
T  20533861 ttactccttccttttttccaaaaccctcc 20533833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 52594671 - 52594826
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||    
T  52594671 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttcaac 52594770  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || |||||| ||||| | ||||||||||||||||  | |||||||||||| |||||    
T  52594771 ttactcctttcttttttccaaaaccctcccctccccttccctccaaactcccaaac 52594826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 41844469 - 41844338
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |     
T  41844469 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttctt--aa 41844372  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
     |||||||||||||| | ||||||||||||||||    
T  41844371 atgctccttccttttttccaaaaccctcccctcc 41844338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 48830861 - 48830995
Alignment:
Q  1 atacaatttttgagttcccccaaatgaggg-ggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||||||||| |||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48830861 atacaatttttgagttctcccaaatgagggaggtttttttatcttgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttcca 48830960  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||| | ||||||||||||||||    
T  48830961 cttgctccttccttttttccaaaaccctcccctcc 48830995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 24279948 - 24279799
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||    
T  24279948 atacaatttttgagtttcgccaaatgaagggaattttttattatgagtaaaaaattaacttccaaagccctctcctcccaatgtcttttattccttccac 24279849  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||||||||||||| | ||||||||||| |||| |||||||| ||||||    
T  24279848 ttgctccttccttttttccaaaaccctccactcccttcccctctaaactc 24279799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 56504515 - 56504647
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  56504515 atacaatttttgagttcccccaaatgagggagattttgtattatgtataaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttgcac 56504614  T
Q  101 ttgctccttccttttctgcaaaaccctcccctc 133  Q
    |||||||||||| || | |||||||||||||||    
T  56504615 ttgctccttcctatttttcaaaaccctcccctc 56504647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17873231 - 17873116
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaa-attaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  17873231 atacaatttttgagttcccccaaataagggggattttttattatgagtaaaaagattaacctccaaagccctctcctcccaatgtcttctatttcttcca 17873132  T
Q  100 cttgctccttcctttt 115  Q
    |||||||||| |||||    
T  17873131 cttgctcctttctttt 17873116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 36151417 - 36151567
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||       
T  36151417 atacaatttttgagttcccccaaattaaggggattttttattatgagtaaaaaattaacctccaaagccctcccctcccaatggcttctatttcttctgg 36151516  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||| ||||||||| | |||||||||||||     ||||||||||||||||||||    
T  36151517 ttgcttcttccttttttccaaaaccctcccc-----tcccctccaaactctcaaac 36151567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 21296152 - 21296297
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||    
T  21296152 atacaatttttgagttctcccaaataagggggattttttattatgagtaaaaaattaacctacaaagtcctttcctcccaatgtcttctatttcttccac 21296251  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactct 151  Q
    || |||||||| ||| | ||||||||||||     ||||||||||||||||    
T  21296252 ttactccttccctttttccaaaaccctccc-----ttcccctccaaactct 21296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32948563 - 32948719
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttt-ttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||  |||| ||||||||| |||| |||||||||||||| ||    
T  32948563 atacaatttttgagttccctcaaatgaaggggatttttttattatgagtaaaagattaaccatcaaaaccctctccttccaatgtcttctatttctttca 32948662  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| | | ||||||||||||||  |||| ||||||||| |||||    
T  32948663 cttgctccttccttttttccgaaaccctcccctcccctcccttccaaactcccaaac 32948719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13269987 - 13269856
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||| |||||||||||| || | | ||||||||||||||||||    
T  13269987 atacaatttttgagttctcccaaatgagggagattttttattatgaagaaaaaattaaccttcaaagccctctcttcacgatgtcttctatttcttccac 13269888  T
Q  101 ttgctccttccttttctgcaaaaccctcccct 132  Q
    |||||||||||||||   ||||||||||||||    
T  13269887 ttgctccttcctttttcccaaaaccctcccct 13269856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3127058 - 3127207
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaa-aattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||||||| | || ||| |||||||||||||| ||    
T  3127058 atacaatttttgagttcccccaaatgagagg-attttttgttatgagtaaaaaaattaacctccaaagccctcacttctcaatgtcttctatttctttca 3127156  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
     ||||||||||||||| | ||||| ||||||||||  ||||||||||||||    
T  3127157 tttgctccttccttttttccaaaatcctcccctcccctcccctccaaactc 3127207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 47669844 - 47669709
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa--ttaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||| ||||||  |||||||| ||||||||||||||||||  |||||||||| ||||    
T  47669844 atacaatttttgagttcctccaaatgagggaggttttttattatgaggaaaaaaaattaacctcaaaagccctctcctcccaatatcttctattttttcc 47669745  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||| ||||| | ||||||||||||||||    
T  47669744 acttgctcctttctttttttcaaaaccctcccctcc 47669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 32651333 - 32651443
Alignment:
Q  24 atgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaa 123  Q
    ||||| || ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| | |||||    
T  32651333 atgagtggaattttttatcatgagtaaaagattaacctccaaagccctctcctcccaacgtcttctaattcttccacttactccttctttttttccaaaa 32651432  T
Q  124 ccctcccctcc 134  Q
    |||||||||||    
T  32651433 ccctcccctcc 32651443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 24287542 - 24287393
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||| || ||||| ||||| ||||||  |||| |||| |||||||    
T  24287542 atacaatttttgagttctcccaaataagggaaattttttattatgagtaaaaaattaacatcgaaagctctctcttcccaatatcttttattccttccac 24287443  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||||||| ||||| | ||||| |||||||| | ||| |||||||||||    
T  24287442 ttgctcctttctttttttcaaaatcctccccttcattctcctccaaactc 24287393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 54806500 - 54806354
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    |||||||||||||||| ||||||||||||||    || | ||||||||||| ||||| ||||||||||||||||||| ||||| |||| |||||||||||    
T  54806500 aatttttgagttcccc-aaatgagggggatt----atcacgagtaaaaaatgaaccttcaaagccctctcctcccaatgtcttttattccttccacttgc 54806406  T
Q  105 tccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| || |||| | |||||||||||||||| |||| |||||||||| |||||    
T  54806405 tccatcattttttccaaaaccctcccctcccttcctctccaaactcccaaac 54806354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 50642055 - 50641936
Alignment:
Q  35 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||| ||| |||||  |||||| |||||||||    
T  50642055 tttttattatgagtaaaaaattaacctccacatccctctccttccaatgtcttctatttcttccacttgctctttcattttc--caaaactctcccctcc 50641958  T
Q  135 tttcccctccaaactctcaaac 156  Q
      ||| |||||||||| |||||    
T  50641957 cctcctctccaaactcccaaac 50641936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17622518 - 17622644
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||||        || ||||||||||||||||||    
T  17622518 atacaatttttgagttcccccaaatgagagaggctttttattatgagtaaaaaattaacctccaaagccct--------aatgtcttctatttcttccac 17622609  T
Q  101 ttgctccttc-cttttctgcaaaaccctcccctcc 134  Q
    ||||||||||  |||| | ||||||||||||||||    
T  17622610 ttgctccttcttttttttccaaaaccctcccctcc 17622644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 35959230 - 35959077
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| ||||||||||||||||| || |||| ||||||||  ||||| | |||| ||||||||||| |||| ||| ||  ||||||||||||||    
T  35959230 atacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaagccctcccctcacaatgtactctatttcttccac 35959131  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||| || | ||||| |||||||||| ||||||||||||||| |||||    
T  35959130 ttgctccttcctctt-tccaaaa-cctcccctcccttcccctccaaactcgcaaac 35959077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 32060680 - 32060568
Alignment:
Q  44 tgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctc 143  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||| | |||||| ||||| ||   |||||||    
T  32060680 tgagtaaaaaactaacctccaaagccctctcctcccaatgtcttctatttattctacttactccttcctttttttcaaaactctcccatctcctcccctc 32060581  T
Q  144 caaactctcaaac 156  Q
    ||||||| |||||    
T  32060580 caaactcccaaac 32060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49404670 - 49404756
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtctt 87  Q
    |||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  49404670 atacaaattttgagttcccccaaatgagagaaattttttattatgagtaaaaaattaacctccaaagctctctcctccaaatgtctt 49404756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 21730372 - 21730500
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| || ||||||| |  |||||||||||| |||||||||||||||| |||||  |||||||| |||  ||||||||||||| |||    
T  21730372 atacaatttttgagttctcc-aaatgagtgaaattttttattataagtaaaaaattaaccttcaaagttctctcctctcaatatcttctatttctttcac 21730470  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    |||||||||  |||| | ||||||||||||    
T  21730471 ttgctcctttattttttccaaaaccctccc 21730500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 46176974 - 46177129
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| |||||| |||||||||| || |||| |||||| |  ||||| | | || ||||| ||||| |||||||| ||  ||||||||||||||    
T  46176974 atacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaaccctcccctcccaatgtactctatttcttccac 46177073  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| |||||| |||| | |||||||||||||||| || |||||||||||| |||||    
T  46177074 ttgttccttctttttttccaaaaccctcccctccctttccctccaaactcacaaac 46177129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 31187198 - 31187296
Alignment:
Q  58 acctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||||||||| || |||||  |||||||||| ||||| ||||||||| | ||||||| ||||||||  |||||||||||||| |||||    
T  31187198 acctccaaagccctctcctcctaatgtctttaatttcttccagttgcttcttccttttttccaaaaccatcccctcccgtcccctccaaactcccaaac 31187296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 54205873 - 54205756
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc----aaagccctctcctcccaacgtcttctatttctt 96  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||  ||||| | |||| ||    ||||||||| |||| ||| ||| ||||||||||    
T  54205873 atacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaaa-tgaacccccccccaaagccctcccctctcaaagtcctctatttctt 54205775  T
Q  97 ccacttgctccttcctttt 115  Q
    |||||||||||||||||||    
T  54205774 ccacttgctccttcctttt 54205756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 22435519 - 22435445
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||||||||| |||||||||||||||||||| | ||| || |||| |||||||||||||||||||||| |||||    
T  22435519 gggtagcacttgggtgacattggggtgccaatgttatgcgacattgaccaaccacaatgtcacaagtgtacaaaa 22435445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 22435345 - 22435409
Alignment:
Q  166 tagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    |||||||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  22435345 tagcacttgggtgatattggggtgccaatgtcatgtgacattggcaaaccacaatgtcacaagtg 22435409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28175511 - 28175666
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacct-ccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||| |||||||||| ||||||| ||||||||   |||| ||||||| |||||||||||  ||||||   || |||||||||||||    
T  28175511 atacaattttttagttcctccaaatgaggaggattttgtattatga-agaaaagttaacctcccaaagccctcctctcccattttcctctatttcttcca 28175609  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| ||  |||||||| | | || || |||||||| |||| |||||||||| |||||    
T  28175610 cttacttattccttttttcccaagccttcccctcccttcctctccaaactcgcaaac 28175666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 29821324 - 29821402
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||| ||||||| |||||||||||| ||||| ||  |||||||||||||||||||||||||| ||||| || ||||||    
T  29821324 cacttgggtgacaatggggtgccaatgtcatgggaccttggccaaccacaatgtcacaagtgtacaaaaagataaaaaa 29821402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 43404669 - 43404587
Alignment:
Q  165 gtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||| |||||||| |||||||||| |||| ||| ||||  |||||||||||||||||||||| |||| || ||||||    
T  43404669 gtagcactttagtgacattagggtgccaatgtcatctgacattgatcaaccacaatgtcacaagtgtgaaaaatgataaaaaa 43404587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16318651 - 16318496
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||| |||||||||| || |||| || |||||  ||||  |||||| |  |||||||||  ||||||   ||||||||||||||||    
T  16318651 atacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaag-ttaacccctgaaagccctcctctcccattttcttctatttcttcca 16318553  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||| |||||||| | | || || |||||||| |||||||| |||||| |||||    
T  16318552 cttgctcattccttttttcctaagccttcccctcccttcccctcaaaactcgcaaac 16318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 21081384 - 21081224
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||| |||||||||||| || |||| | ||||||  |||||   | |||||||| |  || |||| ||| ||| ||||||||||||||    
T  21081384 atacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaacattcccctctcaatgtcatctatttcttccac 21081285  T
Q  101 ttgctccttcc-----ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||     |||| | |||| ||||||||||  ||||||||||||||| |||||    
T  21081284 ttgctccttccttctttttttttcaaacccctcccctctcttcccctccaaactcgcaaac 21081224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 52636776 - 52636640
Alignment:
Q  20 ccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgc 119  Q
    |||||||||| || |||| ||||||||  ||||| | | || |||||||||||  || |||| ||  ||||||||||||||||||||  ||||||| | |    
T  52636776 ccaaatgaggagggttttatattatgaagaaaaattaaccccccaaagccctcatcttccaatgtactctatttcttccacttgctcagtccttttttcc 52636677  T
Q  120 aaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||  ||||| ||| ||||||||||||||| |||||    
T  52636676 aaaattctcccatcccttcccctccaaactcgcaaac 52636640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23708180 - 23708129
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaa 52  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  23708180 atacaatttttgagttcccccaaataagtgagattttttattatgagtaaaa 23708129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 30765708 - 30765622
Alignment:
Q  29 ggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||| ||| |||| |||||||||||||  ||||  | |||| || ||| || ||||||||||||||||||||||||||||||    
T  30765708 ggggattttgtatcatgaataaaaaattaaccctcaaaatcatctcatctcaatgttttctatttcttccacttgctccttcctttt 30765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 35297639 - 35297573
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagt 229  Q
    ||||||||||| ||||| ||||||||| |||| |||||||||||| | |||||||||||| ||||||    
T  35297639 gggtagcacttgggtgatattggggtgtcaatgtcatgtgatattagtcaaccacaatgttacaagt 35297573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 45971594 - 45971482
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||||||||||||||| |||  ||||||||   |||| |||||| ||||| ||||| |||| ||   || ||||||||||||||    
T  45971594 atacaattttttagttcccccaaatgaggggg-tttagtattatga-agaaaagttaacccccaaaaccctcccctctcattttcctctatttcttccac 45971497  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  45971496 ttgctcattcctttt 45971482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 29821521 - 29821436
Alignment:
Q  163 gggtagcactttggtgacattgggg-tgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||| | |||| |||||| ||||||| ||||| ||| |||| || |||||||||||||||||| ||||| |||||||||    
T  29821521 gggtagcacttggatgacgttgggggtgccaatgtcatgcgatgttggtcagccacaatgtcacaagtgtacaaaaagacaaaaaa 29821436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 13837839 - 13837895
Alignment:
Q  166 tagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgt 222  Q
    ||||||||  ||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  13837839 tagcacttgtgtgacattgtggtgccaatgtcatgtgacattggccaaccacaatgt 13837895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12708881 - 12709036
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  ||||||   || ||||||||||||||    
T  12708881 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcctctatttcttccac 12708980  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||  ||| |||| | | || || ||||||||  |||||||||||||| |||||    
T  12708981 ttacttattctttttttcccaagccttcccctccaatcccctccaaactcgcaaac 12709036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49668151 - 49668305
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||  |||||||| || |||  ||||||||  ||||  ||||||||||||||| |  |||||||   |  ||||||||||||||    
T  49668151 atacaattttttagttcccttaaatgaggagggtttaatattatgaagaaaag-ttaacctccaaagccgtaccctcccatttttctctatttcttccac 49668249  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| |   ||||| |||||||  |||| |||||||||| |||||    
T  49668250 ttgctcattccttttttctcaaaccttcccctcacttcctctccaaactcgcaaac 49668305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 21358024 - 21357987
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21358024 caaaaccctcccctcccttcccctccaaactctcaaac 21357987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 45022829 - 45022898
Alignment:
Q  64 aaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctc 133  Q
    ||||||||| |||| ||| |||  |||||| |||||||||||||||| |||| | |||||||||||||||    
T  45022829 aaagccctcccctctcaaagtcccctattttttccacttgctccttctttttttccaaaaccctcccctc 45022898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 29114280 - 29114436
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  ||||||   || ||||||||||||||    
T  29114280 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcctctatttcttccac 29114379  T
Q  101 ttgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||  |||| |||| | | || || |||||||| ||||| ||||||||| |||||    
T  29114380 ttacttattcctttttttcccaagccttcccctcccttcccttccaaactcgcaaac 29114436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 38136881 - 38137036
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaa-cctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||| |||||||||  || |||| ||||||||  ||||| |||| || |||||||||||  || |||   || |||||||||||||    
T  38136881 atacaattttttagttcctccaaatgagaagggttttgtattatga-aaaaaagttaaccccccaaagccctcctcttccattttcctctatttcttcca 38136979  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| ||  |||||||| |   || || |||||||| ||||||||||||||| |||||    
T  38136980 cttacttattccttttttctcaagccttcccctcccttcccctccaaactcgcaaac 38137036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 49936549 - 49936399
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaac-ctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||   |||| | ||| | ||||| ||||| |||| ||| ||| | |||||| ||||    
T  49936549 atacaattttttagttcccccaaattaggaggattttgtattatga-agaaaagtgaacaccccaaaaccctcccctctcaaagtcctttatttcatcca 49936451  T
Q  100 cttgctccttccttttct-gcaaaaccctcccctcctttcccctccaaactctcaaa 155  Q
    |||| ||||||||||| |  ||||||||||||     ||||||||||||||| ||||    
T  49936450 cttgatccttccttttttcacaaaaccctccc-----ttcccctccaaactcccaaa 49936399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 56426816 - 56426910
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| ||| |||   || |||||||||||||||||||| |||||||| | ||||  |||||||||| ||| ||| || |||| |||||    
T  56426816 ccaaagccctccccttccatgttcctctatttcttccacttgctcattcctttttttcaaagtcctcccctcccttcaccttcagactcgcaaac 56426910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 11392429 - 11392392
Alignment:
Q  200 gtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  11392429 gtgacattggccaaccacaatgtcacaagtgtacaaaa 11392392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30307407 - 30307366
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttatt 42  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||    
T  30307407 atacaattttttagttcccccaaatgaggaggattttatatt 30307366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 31530242 - 31530279
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  31530242 caaagccctcccctcccttcccctccaaactctcaaac 31530279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 33500468 - 33500399
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||||||| |||||||| |   || || |||||||| ||||| ||||||||| |||||    
T  33500468 tctatttcttccacttgctcattccttttttctcaagccttcccctcccttcccttccaaactcgcaaac 33500399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 37662579 - 37662550
Alignment:
Q  121 aaaccctcccctcctttcccctccaaactc 150  Q
    ||||||||||||||||||||||||||||||    
T  37662579 aaaccctcccctcctttcccctccaaactc 37662550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 48620252 - 48620200
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||| ||||| |||| ||| |||||||||||||||| ||||||||||||    
T  48620252 ccaaagccc-ctccttccaatgtcctctatttcttccacttactccttcctttt 48620200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 53299938 - 53299873
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||| |||||||||| |  ||||||| ||| ||| ||||||||||||||||  |||||||||||    
T  53299938 aaaaataaacctccaaaacattctcctctcaatgtcatctatttcttccacttaatccttcctttt 53299873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 32866866 - 32866930
Alignment:
Q  92 ttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||  ||||||| | |||| |||||||||   ||||||||||||||| |||||    
T  32866866 ttcttccacttgctcaatccttttttccaaacccctcccctttattcccctccaaactcgcaaac 32866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 35297471 - 35297543
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||| ||||  ||||  ||||||| |||| ||||||||||| |||||||||| |||||  ||||||||    
T  35297471 ggtgacatttgggtttcaatgacatgtgacattgaccaaccacaatatcacaagtgtacaaaaaaacaaaaaa 35297543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 42649816 - 42649764
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttt 114  Q
    |||||||||||||||||||| |||||| || ||||||  || |||||||||||    
T  42649816 ccaaagccctctcctcccaaagtcttccatctcttccctttcctccttccttt 42649764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 35701094 - 35700939
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  35701094 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttctttcac 35700995  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | ||||||||||||||||  |||||||||||||| |||||    
T  35700994 ttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaac 35700939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38928749 - 38928882
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||    
T  38928749 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcattccaatgtcttctatttcttccac 38928848  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  38928849 ttgctccttccttttttccaaaaccctcccctcc 38928882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 41695011 - 41694878
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||    
T  41695011 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaactctctccttccaatgtcttctatttcttccac 41694912  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  41694911 ttgctccttcctttttttcaaaaccctcccctcc 41694878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 27480219 - 27480372
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27480219 atacaatttttgagttccctcaaatgaggaggattttttatta--agtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 27480316  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||| ||||||||| | ||||||||||||||||| |||||| ||||||| |||||    
T  27480317 ttgcttcttccttttttccaaaaccctcccctcctctccccttcaaactcccaaac 27480372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 38302400 - 38302533
Alignment:
Q  2 tacaatttttgagttcccccaaatgaggggga-ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  38302400 tacaatttttgagttcccccaaatgagggggaattttttattatgagtaaaatattaacctccaaagccctctcctctcaatgtcttctatttcttccac 38302499  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  38302500 ttgctccttcctttttttcaaaaccctcccctcc 38302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 2021014 - 2020882
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  2021014 atacaatttttgagttcctccaaa-gagggggattttttattatgagtaaaaaattaacctccaaagctctctcctcccaatgtctactatttcttccac 2020916  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  2020915 ttgctccttccttttttccaaaaccctcccctcc 2020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 10295517 - 10295389
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  10295517 atacaatttttgaattcccccaaaagacggggattttttattatgagtaaaaaattaacctccaaagccatctcctcccaatgtcttctatttcttccac 10295418  T
Q  101 ttgctccttccttttctgcaaaaccctcc 129  Q
    ||||||||||||||| | |||||||||||    
T  10295417 ttgctccttccttttttccaaaaccctcc 10295389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 1658211 - 1658078
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  1658211 atacaatttttgaattcccccaaatgaagaggattttttattatgactaaaaaattaacctccaaagtcctctcctcccaatgtcttctatttcttccac 1658112  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| |  |||||||||||||||    
T  1658111 ttgctccttccttttttctaaaaccctcccctcc 1658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4649034 - 4649167
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  4649034 atacagtttttgagttccctcaaatgagggggattttttattatgagtaaaaaattaaccttcaaagccctctcctctcaatgtcttctatttcttccac 4649133  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||| ||| |||| | ||||||||||||||||    
T  4649134 ttgctcattctttttttccaaaaccctcccctcc 4649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32760791 - 32760658
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  32760791 atacaatttttgagttcccccaaatgagggagattttttattataagcaaaaaattaacctccaaagccctctcctcctaatgtcttatatttcttccac 32760692  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
     |||||||||||||| | ||||||||||||||||    
T  32760691 ctgctccttccttttttccaaaaccctcccctcc 32760658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26149637 - 26149523
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26149637 atacaatttttgagttcccccaaatgatgggacttttttattacgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 26149538  T
Q  101 ttgctccttcctttt 115  Q
    ||| |||||||||||    
T  26149537 ttgatccttcctttt 26149523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 17092931 - 17092799
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| ||||||||||||   |||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||    
T  17092931 atacaatttttgagtttccccaaatgaggaa-attttttactatgagtaaaaaattaatctccaaagccctctccttccaatgtcttctatatcttccac 17092833  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| | ||||||||||||||||    
T  17092832 ttgctccttctttttttccaaaaccctcccctcc 17092799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 41638388 - 41638243
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||| |||||| | ||||||||| || |||||||||||| |||||    
T  41638388 atacaattttttagttcccc-aaatgagggaaattttttattatgagtaaaaaattaacttccaaaactctctcctcctaatgtcttctatttcatccac 41638290  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaa 147  Q
    ||||||||||||||| | |||||| || |||||| |||||| |||||    
T  41638289 ttgctccttccttttttccaaaactcttccctcccttccccaccaaa 41638243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37508438 - 37508591
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtc-ttctatttcttcca 99  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| ||| || |||||||||||    
T  37508438 atacaatttttgagttcctccaaatgaggggaattttttattatgaataaaaaattaacctccaaagccctctccttccaatgtctttttatttcttcca 37508537  T
Q  100 cttgctcctt-ccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||| ||   |||| | |||||||||||||||    ||||||||||||| |||||    
T  37508538 cttgctctttattttttttccaaaaccctcccctc----cccctccaaactcccaaac 37508591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25026956 - 25026838
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||      |||||||||    
T  25026956 atacaattttttagttctcccaaatgagggagattttttattatgagtaaaaaattaacctccaaagacctctcctcccaatgtc------ttcttccac 25026863  T
Q  101 ttgctccttccttttctgcaaaacc 125  Q
    ||||||||||||||| | |||||||    
T  25026862 ttgctccttccttttttccaaaacc 25026838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 38120222 - 38120351
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| | |  |||| ||| ||||||||||| ||||||    
T  38120222 atacaatttttgagttcccccaaatgagggagatttttgattaagagtaaaaaattaacctccaaagtctttccctctcaatgtcttctatttgttccac 38120321  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    || ||| |||||||| | ||||||||||||    
T  38120322 ttactcattcctttttttcaaaaccctccc 38120351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 35868860 - 35868758
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||||||||||||||||||||||| |||||| ||||   |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |    
T  35868860 aatttttgagttcccccaaatgaggggaatttttcatta---gtaaaagattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttcc 35868764  T
Q  105 tccttc 110  Q
    ||||||    
T  35868763 tccttc 35868758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 20986616 - 20986538
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  20986616 cactttggtgacattgggatgccaatgtcatgtgatattgaccaactacaatgtcataagtgtgcaaaaggacaaaaaa 20986538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 43496522 - 43496386
Alignment:
Q  21 caaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctcctt-ccttttctgc 119  Q
    ||||| ||||||||||| |||||| | |||||||||||||  |||| ||||||||||||| ||| |||||||||||||||| | || || |||||| | |    
T  43496522 caaataagggggattttgtattataaataaaaaattaacccacaaaaccctctcctcccatcgtgttctatttcttccactagttctttcccttttttcc 43496423  T
Q  120 aaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||   ||||||||||||||| |||||    
T  43496422 aaaaccctcccctttcttcccctccaaactcgcaaac 43496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 25598837 - 25598928
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttctt 96  Q
    ||||||| ||||||||||||| ||| ||| |||||||||||| ||||||||||||| ||| |||||||||||||||| ||||| ||||||||    
T  25598837 aatttttaagttcccccaaataaggaggaatttttattatgaataaaaaattaacccccacagccctctcctcccaatgtcttatatttctt 25598928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 3137704 - 3137789
Alignment:
Q  162 ggggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| || |   |||||||||||||||| |||||||||    
T  3137704 ggggtagcactttggtgacattggggtgtcaatgtcatgtgatattggccaatcatagcatcacaagtgtgcaaaatgacaaaaaa 3137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 5396437 - 5396354
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||| ||||||||||||||||||||||| ||| |||| ||||| |||||||||| ||||||||||||||||||| ||||||    
T  5396437 gggtagcaatttggtgacattggggtgccaatgtca-gtgacattggtcaaccacaatatcacaagtgtgcaaaaggataaaaaa 5396354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5772767 - 5772921
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| | |||| |||||||||| || |||| ||||||||  ||||  |||||| |||||||||||  ||||||   |||||||||||||||||    
T  5772767 atacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcccattttcttctatttcttccac 5772865  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| ||| |||| | | || || |||||||| |||||||||||||||| ||||    
T  5772866 ttgctcattctttttttcctaagccttcccctcccttcccctccaaactcttaaac 5772921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35683520 - 35683675
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || || ||||||||  ||||||   |||||||||||||||||    
T  35683520 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccgaagccctcctctcccattttcttctatttcttccac 35683619  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | ||||| |||||||| ||||||| ||||||| |||||    
T  35683620 ttgctcattccttttttcctaaaccttcccctcccttccccttcaaactcgcaaac 35683675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 35708801 - 35708955
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccact 101  Q
    |||||||||| ||||||| ||||||||| ||||||| || | |||  ||||| | | || ||||||||| ||||| |||| ||| || ||||||||||||    
T  35708801 tacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccccaaagccc-ctccttccaatgtcctcaatttcttccact 35708899  T
Q  102 tgctccttccttttctg-caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    | |||||||||||| |  | |||||||||||||| ||||||||||||||| |||||    
T  35708900 tactccttccttttttttccaaaccctcccctcccttcccctccaaactcacaaac 35708955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6491218 - 6491123
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttc 97  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||   |||||| |||| ||||||||||||||| |||| ||||| |||||||||    
T  6491218 atacaatttttgagttcccccaaatgaggaagattttgtattatga-agaaaaatgaacccccaaagccctctcctaccaatgtcttttatttcttc 6491123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 34394655 - 34394739
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||| || |||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||| ||||| || ||||||    
T  34394655 gggtagcatttgggtgacattggggtgccaatgtgatgtgacattggtcaaccacaatgtcacaagtgtacaaaatgataaaaaa 34394739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 15739533 - 15739408
Alignment:
Q  32 gattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctccc 130  Q
    |||||| |||||||| ||||||||||||||| |||| |||||| || |||| ||||||||||| | |||||||| | ||| ||| || ||||||||||      
T  15739533 gattttgtattatgaataaaaaattaacctctcaaaaccctcttcttccaatgtcttctatttttcccacttgcacattcatttccttcaaaaccctcat 15739434  T
Q  131 ctcctttcccctccaaactctcaaac 156  Q
    ||||  |||||| |||||||||||||    
T  15739433 ctccactccccttcaaactctcaaac 15739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 20986427 - 20986500
Alignment:
Q  164 ggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||||| |||||||||||||| |||| ||| | |||||| ||||| |||||||||||||||||||||||||||    
T  20986427 ggtagcattttggtgacattggcgtgcaaatgttatgtgacattggtcaaccacaatgtcacaagtgtgcaaaa 20986500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 32824696 - 32824542
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||||| |||||| |  |||||||| ||||||||  | ||||| |||| || |||||||||  |||||||   || ||||||||  ||    
T  32824696 atacaatttttgagttcctccaaattaatgggattttgtattatga--agaaaatgaaccccccaaagccctccgctcccaaaacctactatttctaaca 32824599  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||| ||||||| |||| | ||||||||| ||| ||||||||||| |||||    
T  32824598 cttgctcctttcttttctccaaagcactcccctcccttctcctccaaactcgcaaac 32824542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 35704681 - 35704596
Alignment:
Q  64 aaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaact 149  Q
    |||||||||  ||||||| ||| ||||||||||||||||| |||||||||||   |||||||||||||||| |||| |||||||||    
T  35704681 aaagccctcctctcccaatgtcctctatttcttccacttgttccttcctttttcccaaaaccctcccctcccttcctctccaaact 35704596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 41923127 - 41923062
Alignment:
Q  86 ttctatttcttccacttgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    |||||||||||||||||||||||||| |||| | |||||||||| ||| |||||||||||||||||    
T  41923127 ttctatttcttccacttgctccttccttttttttcaaaaccctctccttctttcccctccaaactc 41923062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12096938 - 12096834
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa--ttaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||||||||      | ||||||||||||||| |||||||  | ||||||||||||||||||||| ||| || ||  |||||||||    
T  12096938 atacaatttttgagttcccccaa------gagattttttattatgaataaaaaaaataaacctccaaagccctctcctctcaatgtttttcatttcttcc 12096845  T
Q  99 acttgctcctt 109  Q
    ||||| |||||    
T  12096844 acttgttcctt 12096834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 5998686 - 5998631
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||    
T  5998686 ggtgacattggggcgccaatgtcatgagatattggccaaccacaatatcacaagtg 5998631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 6491418 - 6491476
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctcct 108  Q
    |||||| |||| ||||||||||||||| ||||  |||||||||||||||||||||||||    
T  6491418 aaaaatgaacccccaaagccctctcctaccaatttcttctatttcttccacttgctcct 6491476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 1176061 - 1176118
Alignment:
Q  83 gtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttccc 140  Q
    |||||||||| |||||||||||||||||||||| | |||| ||||||||||| |||||    
T  1176061 gtcttctattccttccacttgctccttccttttttccaaagccctcccctcccttccc 1176118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 32750668 - 32750571
Alignment:
Q  8 ttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgct 105  Q
    |||| |||||||||| |||||| ||||||| |||||| | || |||||||| | | |||||||||||||| |||  | ||||||||||||||| ||||    
T  32750668 tttttagttcccccacatgaggaggattttgtattatcaatataaaattaatcccaaaagccctctcctctcaatttattctatttcttccacatgct 32750571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 3137908 - 3137824
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||| |||||||| |  ||||||||| |||| ||| |||| |||||||| || |||||||||||||||| || ||||||    
T  3137908 gggtagcactatggtgacactacggtgccaatgtcatatgacattgtccaaccacgatatcacaagtgtgcaaaatgataaaaaa 3137824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 15058498 - 15058618
Alignment:
Q  8 ttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctc----ccaacgtcttctatttcttccacttg 103  Q
    ||||||||||| | |||||||||  ||||| || ||||| |||||||||||| |||||| |||| | |||    || | ||||| |||||||||||||||    
T  15058498 ttttgagttcctc-aaatgagggtaattttgtactatgaataaaaaattaacatccaaaaccctttgctcgatcccgatgtcttttatttcttccacttg 15058596  T
Q  104 ctccttccttttctgcaaaacc 125  Q
    |||||||||||| | |||||||    
T  15058597 ctccttccttttttccaaaacc 15058618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 9684831 - 9684983
Alignment:
Q  4 caatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacct-ccaaagccctctcctcccaacgtcttctatttcttccactt 102  Q
    |||||||| | ||||||||||||||| || |||| ||||||||  | |||||| |  | |||||||| || |||| |||  || |||||||||| |||||    
T  9684831 caattttttaattcccccaaatgaggagggttttgtattatga--agaaaattgaaataccaaagccttcccctctcaatatcatctatttctttcactt 9684928  T
Q  103 gctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||  |||| | |||| |||||||||||||||| |||| ||||| |||||    
T  9684929 gctccttcaattttttccaaacccctcccctcctttcctctcccaactcacaaac 9684983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10438020 - 10437865
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| |||||| | |||||||| ||||||| |||||| |  ||||  | | || |||||| |||| |||||||   |  ||||||||||||||    
T  10438020 atacaactttttagttcctctaaatgaggaggattttgtattataaagaaaagttaaccccccaaagacctcccctcccatttttctctatttcttccac 10437921  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || ||| |||| ||||||||||||||| |||||    
T  10437920 ttgctcattccttttttcccaagccttcctctcccttcccctccaaactcgcaaac 10437865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 1978237 - 1978195
Alignment:
Q  4 caatttttgagttcccccaaatgagggggattttttattatga 46  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  1978237 caatttttgagtttccccaaatgagggggattttgtattatga 1978195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10843078 - 10842965
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  ||||||   || ||||||||||||||    
T  10843078 atacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcctctatttcttccac 10842980  T
Q  101 ttgctccttcctttt 115  Q
    || ||  ||||||||    
T  10842979 ttacttattcctttt 10842965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 35545759 - 35545683
Alignment:
Q  166 tagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||| |||||||||||||| ||| |||| | || ||||||||| ||||||     ||||||||||||||||||||||||||    
T  35545759 tagcattttggtgacattggagtgtcaatgttatctgatattggtcaacca-----tcacaagtgtgcaaaaggacaaaaaa 35545683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 3676642 - 3676706
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactct 151  Q
    |||||||||||||||| ||| |||||||| | |||  |||| ||||||||||||||| |||||||    
T  3676642 tctatttcttccactttctcattcctttttttcaagtcccttccctcctttcccctctaaactct 3676706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 14570091 - 14570234
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||| ||||| ||||||||||| || |||  |||||| |  ||||  | | |||||||||||||| |||||||   || |||||||| ||||||||     
T  14570091 aattttttagttctcccaaatgaggagggtttagtattataaagaaaagttaaccctccaaagccctcccctcccattttcctctatttcgtccacttgg 14570190  T
Q  105 tccttccttttctgcaaaaccctcccctcctttcccctccaaac 148  Q
    || |||||||| | | || || |||| ||| |||||||||||||    
T  14570191 tcattccttttttcccaagccttcccttccattcccctccaaac 14570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 15061973 - 15062081
Alignment:
Q  21 caaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctc----ccaacgtcttctatttcttccacttgctccttccttttc 116  Q
    ||||| ||||| ||||| || ||||| ||||||||||||  ||||| |||| |||||    || | ||||||||||| |||||||| ||||||||||||     
T  15061973 caaataaggggaattttgtactatgaataaaaaattaacacccaaaaccctttcctcgatcccgatgtcttctatttgttccacttactccttccttttt 15062072  T
Q  117 tgcaaaacc 125  Q
    | |||||||    
T  15062073 tccaaaacc 15062081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 5998539 - 5998593
Alignment:
Q  183 tggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||||| |||| |||||||| ||||| |||||||||||||| |||||| |||||    
T  5998539 tggggtgtcaatgtcatgtgacattggtcaaccacaatgtcagaagtgtacaaaa 5998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 34063724 - 34063790
Alignment:
Q  50 aaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||||| || ||||||||| ||||||||  || | |||||||||||||||||||||| ||||    
T  34063724 aaaaattaacccccgaaagccctcccctcccaatatcatatatttcttccacttgctccttcttttt 34063790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39649605 - 39649491
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||| ||||  ||||  | | || |||||||||||  ||||||   || | ||||||||||||    
T  39649605 atacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctcccattttcatttatttcttccac 39649506  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  39649505 ttgctcattcctttt 39649491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 1658395 - 1658432
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  1658395 caaaaccctcccctcccttccccttcaaactctcaaac 1658432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 1978160 - 1978123
Alignment:
Q  74 cctcccaacgtcttctatttcttccacttgctccttcc 111  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  1978160 cctcccaatgtcttctatttcatccacttgctccttcc 1978123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 6632599 - 6632531
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| |||||||||||| | | |||| ||||||||| ||  ||||||||||| |||||    
T  6632599 tctatttcttccacttactccttcctttttttc-aaactctcccctccattttcctccaaactcgcaaac 6632531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 16183973 - 16183928
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaat 220  Q
    |||||||||||||||| ||| |||||||||||||| |||| |||||    
T  16183973 ggtgacattggggtgctaatgtcatgtgatattggtcaactacaat 16183928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17668189 - 17668293
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||| |||||||||||||| ||||||||| ||||||  |||||| |   |||||| ||||||||||||| || || | |||  || | ||||||||||||    
T  17668189 ataccatttttgagttcccacaaatgaggaggatttagtattat-aaagaaaaatgaacctccaaagccttccccactcaatctcatatatttcttccac 17668287  T
Q  101 ttgctc 106  Q
    ||||||    
T  17668288 ttgctc 17668293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 18670981 - 18670912
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| ||||| || |||||||| | | || || |||||||| ||||||||||||||| |||||    
T  18670981 tctatttcttcgacttgatcattccttttttccgaagccttcccctcccttcccctccaaactcacaaac 18670912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 21916347 - 21916454
Alignment:
Q  8 ttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaacgtcttctatttcttccacttgctc 106  Q
    |||| ||||||||||||| ||| || |||| ||| ||||  ||||| |||||| | ||||| |||| |||||||  ||| ||||||||||||| || |||    
T  21916347 tttttagttcccccaaataaggagggttttgtatcatgaagaaaaa-ttaacccctcaaagtcctcccctcccagtgtcatctatttcttccaattactc 21916445  T
Q  107 cttcctttt 115  Q
    |||||||||    
T  21916446 cttcctttt 21916454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 27500018 - 27499863
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27500018 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 27499919  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | ||||||||||||||||  |||||| ||||||| |||||    
T  27499918 ttgctccttcctttttttcaaaaccctcccctcccctccccttcaaactcccaaac 27499863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 33991575 - 33991442
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33991575 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 33991476  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| | ||||||||||||||||    
T  33991475 ttgctccttcattttttccaaaaccctcccctcc 33991442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 13255377 - 13255250
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccact 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13255377 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccact 13255278  T
Q  102 tgctccttccttttctgcaaaaccctcc 129  Q
    |||||||||||||| | |||||||||||    
T  13255277 tgctccttccttttttccaaaaccctcc 13255250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 1688264 - 1688396
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1688264 atacaatttttgagttcccc-aaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 1688362  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  1688363 ttgctccttccttttttccaaaaccctcccctcc 1688396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 47905736 - 47905891
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  47905736 atacaatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaactaacctccaaaaccctctcctcccaatgtcttctatttcttccac 47905835  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || |||||||||||| | |||||||||||||| |  |||||||||||||| |||||    
T  47905836 ttactccttccttttttccaaaaccctccccttccctcccctccaaactcccaaac 47905891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2925981 - 2926110
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  2925981 atacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattttttccac 2926080  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    ||||||||||||||| | ||||||||||||    
T  2926081 ttgctccttccttttttccaaaaccctccc 2926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23871510 - 23871643
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  23871510 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacttccaaagccctctcctctcaatgtcttctatttcttccac 23871609  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  23871610 ttgctccttccttttttccaaaaccctcccctcc 23871643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 12293844 - 12293689
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||   |||||||||||||||||    
T  12293844 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaatttaacctccatagccctctcctcccagtttcttctatttcttccac 12293745  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| ||||||||||| | |||||||||||||||   |||||||||||||| |||||    
T  12293744 ttgatccttccttttttccaaaaccctcccctctcctcccctccaaactcccaaac 12293689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 17688374 - 17688222
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa--ttaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  17688374 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaaaattaacctccaaagccctctcctcccaatgttttctatttcttcc 17688275  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||||| | |||||||||||||     ||||||||||||||||||||    
T  17688274 acttgctccttccttttttccaaaaccctcccc-----tcccctccaaactctcaaac 17688222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 40707243 - 40707400
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaa-aattaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  40707243 atacaatttttgagttcccccaaatgagagggatttttttattatgagtaaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttcc 40707342  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||||| | |||||| || |||||  ||||||||||||||| |||||    
T  40707343 acttgctccttccttttttccaaaactcttccctctcttcccctccaaactcccaaac 40707400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 38794992 - 38794849
Alignment:
Q  13 agttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcct 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  38794992 agttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctattttttccacttgctccttcct 38794893  T
Q  113 tttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| | ||||||||||| ||||  || ||||||||||| |||||    
T  38794892 ttttttcaaaaccctccactcccctcgcctccaaactcccaaac 38794849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 51246610 - 51246765
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||    
T  51246610 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctctaaagccctttcctcccaatgtcttctatttctttcac 51246709  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||| ||||| | |||||||||| |||||  |||||||||||||| |||||    
T  51246710 ttgctcctttctttttttcaaaaccctctcctcccctcccctccaaactcccaaac 51246765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26757202 - 26757336
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||     
T  26757202 atacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctatttcttccat 26757301  T
Q  101 ttgctccttcc-ttttctgcaaaaccctcccctcc 134  Q
    ||||||||||| |||| | ||||||||||||||||    
T  26757302 ttgctccttcctttttttccaaaaccctcccctcc 26757336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 39889705 - 39889859
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39889705 atacaatttttgagttcccccaaattagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattttttccac 39889804  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaa 155  Q
    || ||||||||  || | |||||||||||||| |  |||||||||||||| ||||    
T  39889805 ttactccttcccattttccaaaaccctccccttccctcccctccaaactcccaaa 39889859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 42488674 - 42488805
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  42488674 atacaatttttgagttcccccaaatgagggagattttttatcatcagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccac 42488773  T
Q  101 ttgctccttccttttctgcaaaaccctcccct 132  Q
    |||||| |||||||| | ||||||||||||||    
T  42488774 ttgctcattccttttttccaaaaccctcccct 42488805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 1523625 - 1523472
Alignment:
Q  5 aatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttg 103  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||    
T  1523625 aatttttgagttcccccaaacgagggggatttttttattatgagtaaaaaattaacctccatagccctctcctcccaatgtcttctatttcttccacctg 1523526  T
Q  104 ctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||| |||| | ||||||||||  ||||  ||||||||||||||||||||    
T  1523525 ctccttcctttttttccaaaaccctcatctcccatcccctccaaactctcaaac 1523472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26940640 - 26940485
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||| ||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||| || |||| ||||||| |||| |||||||||||||||||    
T  26940640 atacattttttgaattcccc-aaatgaggggaatttttttattatgagtaaaaaattaacccccgaagctctctccttccaatgtcttctatttcttcca 26940542  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  26940541 cttgctccttccttttttccaaaaccctcccctcctctcccctccaaactctcaaac 26940485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 42162102 - 42162233
Alignment:
Q  3 acaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccactt 102  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||    
T  42162102 acaatatttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcatctatttcttccactt 42162201  T
Q  103 gctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||| | ||||| ||||||||||    
T  42162202 gctccttccttttttccaaaatcctcccctcc 42162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 43571999 - 43572153
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43571999 atacaatatttgagttcccccaaatgatggaaattttttattatgagtaaaaaattaacctccaaagccctctcct-ccaatgtcttctatttcttccac 43572097  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | |||||| || ||||||  |||||||||||||| |||||    
T  43572098 ttgctcattcctttttttcaaaactctgccctcccctcccctccaaactcccaaac 43572153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30538796 - 30538929
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  30538796 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaaactctctcctcccaatgtcttctatttcttccac 30538895  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    || |||||||||||| | |||||| |||| ||||    
T  30538896 ttactccttccttttttccaaaacgctcctctcc 30538929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15463854 - 15463740
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  15463854 atacaatttttcagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgacttctatttcttccac 15463755  T
Q  101 ttgctccttcctttt 115  Q
    |||||  ||||||||    
T  15463754 ttgcttattcctttt 15463740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8156385 - 8156519
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| || ||||||||||| ||    
T  8156385 atacaatttttaagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaaagccctctccttccaatgttttctatttctttca 8156484  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| ||||  | ||||||||||||||||    
T  8156485 cttgctcctttctttctttcaaaaccctcccctcc 8156519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11017633 - 11017484
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||| | ||| ||| ||| | ||||||||||||    
T  11017633 atacaatttttgagttccccaaaatgagagggaatttttattatgagtaaaatattaacctccaaagcccttttctctcaatgtcatatatttcttccac 11017534  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||||||||||||| | ||||| ||| ||||||  ||||||||||||||    
T  11017533 ttgctccttccttttttccaaaatccttccctcccctcccctccaaactc 11017484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7401573 - 7401729
Alignment:
Q  1 atacaatttttgagttcccccaa-atgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| ||  | ||||||||||||||    
T  7401573 atacaatttttgagttccccccatatgagggagattttttattatgagtaaaaaattaatctccaaaaccctctcctcctaatattttctatttcttcca 7401672  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    | |||||||||||||| |  |||||||||||||||  |||| ||||||||| |||||    
T  7401673 cctgctccttccttttttctaaaaccctcccctcccctcccttccaaactcccaaac 7401729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13061443 - 13061595
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga----gtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttctt 96  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||    |||||||||||||||||||||||||||| ||| || |||||| |||||||    
T  13061443 atacaatttttgagatcccctaaatgagggggattttttattaggaaggagtaaaaaattaacctccaaagccctctcttccgaatgtcttcaatttctt 13061542  T
Q  97 ccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaact 149  Q
    ||||||||||||||||||| | ||||||||| ||||||  ||||||| |||||    
T  13061543 ccacttgctccttccttttttccaaaacccttccctcccctcccctctaaact 13061595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 50247629 - 50247474
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  50247629 atacaatctttgagttcccataaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctccttcgaatgtcttctatttcttccac 50247530  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| ||||||||||| |  | |||| ||||||||  | |||| ||||||| |||||    
T  50247529 ttgttccttccttttttctataaccatcccctccccttcccttcaaactcccaaac 50247474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 896542 - 896675
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||  |||| ||||  ||||||    
T  896542 atacaatttttgagttcccccaaatgaaggagattttttactatgagtaaaaaattaacctccaaagccttctcctcccaatatcttttattctttccac 896641  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| | ||||| ||||||||||    
T  896642 ttgctccttctttttttccaaaatcctcccctcc 896675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 938289 - 938417
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||||||||||||||     
T  938289 aatttttgagttcccccaattgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcctctcaatatcttctatttcttccacttga 938388  T
Q  105 tccttc-cttttctgcaaaaccctcccct 132  Q
    ||||||  |||| | ||||||||||||||    
T  938389 tccttcttttttttccaaaaccctcccct 938417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 32295644 - 32295545
Alignment:
Q  35 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||| | ||||||||    
T  32295644 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttctttttttccaaaatcttcccctcc 32295545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 17675215 - 17675118
Alignment:
Q  18 ccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| | |||||||||||||||| ||||||||||||||    
T  17675215 ccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccttcttctcccaatgccttctatttcttccacatgctccttcctttt 17675118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 45565163 - 45565008
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaa---agccctctcctcccaacgtcttctatttcttc 97  Q
    ||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||| |||| |||||||||||||||    
T  45565163 atacaattttttagttcctc-aaatgagggagattttttattatgagtaaaaaattaacctccaaagcagccctctccttccaatgtcttctatttcttc 45565065  T
Q  98 cacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| | |||| || |||| |  ||||||||||||||| ||||| ||||||||| |||||    
T  45565064 cac-tactccatctttttttctaaaaccctcccctcc-ttcccttccaaactcccaaac 45565008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 52073496 - 52073650
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccact 101  Q
    |||||||||||||||||||||||||||| || ||||  |||||||  |||||   |||| |||||||| || |||| ||| ||| |||||||||||||||    
T  52073496 tacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaatgaaacc-ccaaagccttcccctctcaatgtcatctatttcttccact 52073594  T
Q  102 tgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||| |||| |||||| ||||||||||| ||||||||||||||| |||||    
T  52073595 tgctccttcctttttttgcaaacccctcccctcccttcccctccaaactcgcaaac 52073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 2175363 - 2175228
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccct----ctcctcccaacgtcttctatttctt 96  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||    ||||||||||  |||||||||||||    
T  2175363 atacaatttttgagttccc--agatgagggggattttttattatgagtaaaaaattaacctcgaaagccctctccctcctcccaatatcttctatttctt 2175266  T
Q  97 ccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
     ||||| |||||| ||| | | ||||| ||||||||||    
T  2175265 tcacttactcctttcttatttccaaaatcctcccctcc 2175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47206470 - 47206535
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47206470 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 47206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49102999 - 49103153
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||| || |||| | || |||  |||||   | |||||||||||| |||||||||| ||| ||||||||||||||    
T  49102999 atacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaaataaaccctccaaagccc-ctcctcccaatgtcctctatttcttccac 49103097  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||||| |||||| | | |||||||||||||| ||||||||||||||| |||||    
T  49103098 ttactcctccctttttttccaaaccctcccctcccttcccctccaaactcgcaaac 49103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 50476572 - 50476447
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc-aacgtcttctatttcttcca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| ||         ||||||||| ||| || |||||||||||||||||    
T  50476572 atacaatttttgagttccctcaaatgagggggattttgtattatgaataaaaaaata---------gccctctcccccccaatgtcttctatttcttcca 50476482  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||| | ||||||||||||||||    
T  50476481 cttgctccttccttttttccaaaaccctcccctcc 50476447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 14152683 - 14152601
Alignment:
Q  52 aaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||| | ||||||||||||||||    
T  14152683 aaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctccatcattttttccaaaaccctcccctcc 14152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28773425 - 28773559
Alignment:
Q  1 atacaatttttgagttccccc-aaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| ||||||||| |||  ||||||||||| |||| ||| ||||| ||||||||||| | |||||||||||||| |||||| |||| |||||    
T  28773425 atacaattttttagttccccccaaacaagggggattttgtattgtgaataaaagattaacctccataaccctctcctcccaatgtcttcaattttttcca 28773524  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcc 134  Q
    | |||| ||| ||||| | ||||||||||||||||    
T  28773525 catgctactttcttttttccaaaaccctcccctcc 28773559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 17556697 - 17556547
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||| ||||||||||||||||| || |||| |||| |||  |||||     || |||||||| ||||||||||| ||| |||||||||||||||| |    
T  17556697 aattttttagttcccccaaatgaggagggttttatattttgaagaaaaataagccccccaaagcc-tctcctcccaatgtcctctatttcttccacttac 17556599  T
Q  105 tccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| | |  ||||||||||||| ||||||||||||||| |||||    
T  17556598 tccttcctttttttctgaaccctcccctcccttcccctccaaactcgcaaac 17556547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7964008 - 7963942
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 67  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  7964008 atacaatttttgagttcctccaaatgagggggattttttactatgagtaaaaaattagcctccaaag 7963942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 36886900 - 36886749
Alignment:
Q  4 caatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttg 103  Q
    |||||||| |||||||| ||||||||||| |||  ||||||||  ||||  |||||| ||||||||||| |||| ||   || |||||||||||||||||    
T  36886900 caattttttagttccccaaaatgaggggggtttagtattatgaagaaaag-ttaacccccaaagccctcccctctcattttcctctatttcttccacttg 36886802  T
Q  104 ctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| |||||||| | | || || |||||||| ||||||||||||||| |||||    
T  36886801 ctcattccttttttcccaagccttcccctcccttcccctccaaactcgcaaac 36886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36269777 - 36269622
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||||||||  ||||  | | || ||||||||||| |||||||   |  ||||||||||||||    
T  36269777 atacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcccctcccatttttctctatttcttccac 36269678  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || |||||||  ||||||||||||||| |||||    
T  36269677 ttgctcattccttttttcccaagccttcccctcacttcccctccaaactcgcaaac 36269622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 50587063 - 50586934
Alignment:
Q  19 cccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctg 118  Q
    ||||||||||| ||||||| ||||||||  |||||   | || ||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||| |     
T  50587063 cccaaatgaggaggattttgtattatgaagaaaaatgaaccccccaaagccctc-cctctcaatgtcctctatttcttccacttgctccttccttttttc 50586965  T
Q  119 caaaaccctcccctcctttcccctccaaact 149  Q
    |||| | |||| |||| ||||||||||||||    
T  50586964 caaagctctcctctcccttcccctccaaact 50586934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 28718911 - 28718994
Alignment:
Q  74 cctcccaacgtcttctatttcttccacttgctccttccttttctgc-aaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||  || ||||||||||||||||||| ||||||||| | | |||||||||| |||||||||||||||||||| |||||    
T  28718911 cctcccaatatcctctatttcttccacttgcttcttcctttttttccaaaaccctccactcctttcccctccaaactcgcaaac 28718994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 29092120 - 29091966
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  |||||| |||||||||||  ||||||   || ||||||||||||||    
T  29092120 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcccattttcctctatttcttccac 29092022  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||  ||| |||| | | ||||| |||||||| |||| |||||||||| |||||    
T  29092021 ttacttattcattttttcccaaaccttcccctcccttcctctccaaactcgcaaac 29091966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5584539 - 5584425
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  ||||||   |||||||||||||||||    
T  5584539 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcttctatttcttccac 5584440  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  5584439 ttgctcattcctttt 5584425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32299128 - 32299086
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttatta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32299128 atacaatttttgagttcccccaaatgagggggattttttatta 32299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 39179250 - 39179308
Alignment:
Q  98 cacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||    
T  39179250 cacttgctccttccttttttccaaaaccctcccctcccttcccctccaaactcccaaac 39179308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 7915547 - 7915414
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||| | |||| |||||||| || || | ||||||||  |||||   | || |||||||||||  ||||||| ||  ||||||| ||||||    
T  7915547 atacaatttttgaatcccccaaaatgaggagggttctatattatgaagaaaaatgaaccccccaaagccctcctctcccaaagttctctattttttccac 7915448  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| |  |||||||||||||||    
T  7915447 ttgctccttccttttttcaaaaaccctcccctcc 7915414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 5970526 - 5970610
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||| ||||||||||| ||||| || ||  ||||||||||| |||| |||||||||||| | ||||||||||| ||||    
T  5970526 aaaaattaacccccaaagccctcccctcctaatgtactctatttcttcaacttactccttcctttttttcaaaaccctcctctcc 5970610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14153145 - 14153090
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaatta 57  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  14153145 atacaatttttgagttccct-aaatgagggagattttttattatgagtaaaaaatta 14153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 39508804 - 39508669
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa--gccctctcctcccaacgtcttctatttcttcc 98  Q
    ||||||||||| | |||||||||||||| |||||||| ||||| || | |||||||||   |||||  ||| ||||||  |||  |||||||||||||||    
T  39508804 atacaattttttaattcccccaaatgagagggattttgtattaagaattaaaaattaatacccaaaaagccttctcctttcaatatcttctatttcttcc 39508705  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||| ||| |||| || |  |||||||||||||||    
T  39508704 acttgttccatcctcttttctaaaaccctcccctcc 39508669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 50599069 - 50599155
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaac 148  Q
    ||||||||||| |||| ||| ||| ||||||| |||||||||||||||||||||   |||| || |||||||| || ||||||||||    
T  50599069 ccaaagccctcccctctcaaagtcctctattttttccacttgctccttcctttttcccaaagccgtcccctccattgccctccaaac 50599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27102871 - 27102985
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacct-ccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||| |||||||||| | | ||||| ||||||||   |||||| ||||| ||||||| ||| ||||| ||  ||||||||||||| ||    
T  27102871 atacaatttttgagtttccccaaatgaagagcattttgtattatga-agaaaaatgaacctcccaaagcactcccctccaaatatcttctatttctttca 27102969  T
Q  100 cttgctccttcctttt 115  Q
    ||||||| ||| ||||    
T  27102970 cttgctcattcttttt 27102985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28748234 - 28748137
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||||    ||||||| |||||| |||||| | ||||||| ||||||| ||| || ||||||| ||| |||||||||||||||||    
T  28748234 atacaatttttaagttcccaagtatgagggagattttgtattataaataaaaaaataacctc-aaatccttctcctctcaatgtcttctatttcttcca 28748137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28848836 - 28848949
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||| || |||| | ||||||   |||||| || | |||||||| || | || ||| | | ||||||||||||||    
T  28848836 atacaatttttgagttcccccaaatgaggagggttttgtgttatga-agaaaaatgaaaccccaaagccttcccgtctcaatgccatctatttcttccac 28848934  T
Q  101 ttgctccttcctttt 115  Q
    || ||||||| ||||    
T  28848935 tttctccttcatttt 28848949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41432813 - 41432923
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||||||| ||||||||||||| || |||| ||||||||  |||||   |||| |||||||| || ||||  || ||| | ||||||||||||    
T  41432813 atacaaattttgagt-cccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaagccttcccctc--aatgtcatatatttcttccac 41432909  T
Q  101 ttgctccttccttt 114  Q
    ||||||||||||||    
T  41432910 ttgctccttccttt 41432923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 46001600 - 46001487
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||||||||| |||||  ||||||   || ||||||||||||||    
T  46001600 atacaattttttagttcctccaaatgaggagggttttatattatga-agaaaagttaacctccaaaaccctcctctcccattttcctctatttcttccac 46001502  T
Q  101 ttgctccttcctttt 115  Q
    || ||  ||||||||    
T  46001501 ttacttattcctttt 46001487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 34918811 - 34918892
Alignment:
Q  34 ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||||||| || ||||||||||  |||||   | ||||||||| ||||| ||||||||||| |||||| ||||||||    
T  34918811 ttttttattatgaatagaaaattaaccctcaaagttatttcctcccaatgtcttatatttcttccaattgctcattcctttt 34918892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 9595608 - 9595564
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatga 46  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||    
T  9595608 tacaattttttagttcccccaaattagggggattttgtattatga 9595564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23412000 - 23412111
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| |||||||  |||||||   |||||| |||||| || | | |||||||  || ||| ||||||||||||||    
T  23412000 atacaattttttagttcctccaaatgaggaggattttgaattatga-agaaaaatgaacctcaaaggtcttctcctcttaatgtcatctatttcttccac 23412098  T
Q  101 ttgctccttcctt 113  Q
    ||| ||| |||||    
T  23412099 ttgttccatcctt 23412111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 11619471 - 11619530
Alignment:
Q  166 tagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcac 225  Q
    ||||||||  ||||||||||| ||||||| ||||| || |||||| ||||||||||||||    
T  11619471 tagcacttgagtgacattgggttgccaatgtcatgcgacattggcaaaccacaatgtcac 11619530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 25708500 - 25708567
Alignment:
Q  89 tatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||| ||||||||||||   | |||||||||||||| ||||||||  ||||| |||||    
T  25708500 tatttcttccacttactccttcctttttatctaaaccctcccctcccttcccctcataactcgcaaac 25708567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 27255243 - 27255129
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||| ||||| ||||||  ||||||||| || |||| ||||||||  ||||  ||||||||| |||||||||  ||||||   || |||||||||||||    
T  27255243 atacatttttttagttccttcaaatgaggagggttttgtattatgaagaaaag-ttaacctcccaaagccctcctctcccattttcctctatttcttcca 27255145  T
Q  100 cttgctccttcctttt 115  Q
    ||||||| ||||||||    
T  27255144 cttgctcattcctttt 27255129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 50402771 - 50402704
Alignment:
Q  29 ggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttctt 96  Q
    |||||||||||||||| |  |||||||||||||| ||||| |||| ||||| | |||||| |||||||    
T  50402771 ggggattttttattataaacaaaaaattaacctcaaaagctctcttctcccgatgtcttcgatttctt 50402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 19403543 - 19403477
Alignment:
Q  50 aaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||||| || ||||||||| ||||||||  || | |||||||||||||||||||||| ||||    
T  19403543 aaaaattaacccccgaaagccctcccctcccaatatcatatatttcttccacttgctccttcttttt 19403477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33324667 - 33324554
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||| ||||||||| || |||  ||||||||  ||||  | | || ||||||||||||| |||||   || ||||||||||| ||    
T  33324667 atacaattttt-agttccctcaaatgaggagggtttagtattatgaagaaaagttaaccccccaaagccctctcttcccattttcctctatttcttctac 33324569  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  33324568 ttgctcattcctttt 33324554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43036360 - 43036472
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||| ||||||||||| || |||| |||| |||  ||||| | | || ||||||||| |||||||||| ||  ||||||||||||||    
T  43036360 atacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaaaattaaccccccaaagccc-ctcctcccaatgtactctatttcttccac 43036457  T
Q  101 ttgctccttcctttt 115  Q
    || || ||| |||||    
T  43036458 ttacttctttctttt 43036472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 5883699 - 5883763
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||| |||| ||||||| ||||||||| || ||||||||||| || ||||| ||||||||||||    
T  5883699 aaaaataaacccccaaagctctctcctcctaatgtcttctattt-ttgcacttactccttcctttt 5883763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 9595780 - 9595817
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  9595780 caaaaccctcccctcccttcccctccaaactcccaaac 9595817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30543400 - 30543445
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga 46  Q
    |||||||||||||||||||||| ||||||  |||||| ||||||||    
T  30543400 atacaatttttgagttcccccacatgaggaagattttgtattatga 30543445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 45565348 - 45565385
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  45565348 caaaaccctcccctcccttcccctccaaactcgcaaac 45565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 48541299 - 48541250
Alignment:
Q  200 gtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaact 249  Q
    ||||||||||| ||| ||||| |||||||||| |||||| ||||||||||    
T  48541299 gtgatattggctaactacaatatcacaagtgtacaaaagaacaaaaaact 48541250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 50194044 - 50193991
Alignment:
Q  177 tgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    |||||||| |||  ||||||||||||| ||||| |||||||||||| |||||||    
T  50194044 tgacattgtggtttcaatttcatgtgacattggtcaaccacaatgtgacaagtg 50193991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 23556434 - 23556466
Alignment:
Q  70 ctctcctcccaacgtcttctatttcttccactt 102  Q
    ||||||| |||||||||||||||||||||||||    
T  23556434 ctctccttccaacgtcttctatttcttccactt 23556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 47206538 - 47206577
Alignment:
Q  94 cttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  47206538 cttccacttgctccttcctttt-tccaaaaccctcccctcc 47206577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 47742517 - 47742441
Alignment:
Q  50 aaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaacc 125  Q
    ||||||||||| || ||||||||| | || ||| ||| |||||||||||||||| ||||||| |||| | |||||||    
T  47742517 aaaaattaaccccccaaagccctcccttctcaatgtcctctatttcttccacttactccttcttttttttcaaaacc 47742441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 50247815 - 50247851
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaa 155  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  50247815 caaaaccctcccctcccttcccctccaaactcccaaa 50247851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3658558 - 3658713
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  3658558 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacccccaaagctctctcctcccaatgtcttctatttcttccac 3658657  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||| | | ||||||||||||||||  |||||||||||||| |||||    
T  3658658 ttgctccttccttctttccaaaaccctcccctcccctcccctccaaactcccaaac 3658713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 33406679 - 33406834
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33406679 atacaatttttgagttccctcaaatgagggggattttttattatgagtaaaaaattaaccttcaaagccctctcctcccaatgtcttctatttcttccac 33406778  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| |  |||||||||||||||  |||||||||||||| |||||    
T  33406779 ttgctccttccttttttttaaaaccctcccctcccctcccctccaaactcccaaac 33406834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23620840 - 23620969
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23620840 atacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 23620939  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    ||||||||||||||| | ||||||||||||    
T  23620940 ttgctccttccttttttccaaaaccctccc 23620969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 34652098 - 34652246
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34652098 atacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 34652197  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaact 149  Q
    |||||||||||||||   |||||||||||||  |  |||||||||||||    
T  34652198 ttgctccttcctttttcccaaaaccctccccctccctcccctccaaact 34652246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3571806 - 3571939
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||    
T  3571806 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctctttccaatgtcttctatttcttccac 3571905  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  3571906 ttgctccttccttttttccaaaaccctcccctcc 3571939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 28437589 - 28437721
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  28437589 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttttatttcttccac 28437688  T
Q  101 ttgctccttcc-ttttctgcaaaaccctcccct 132  Q
    ||||||||||| |||| | ||||||||||||||    
T  28437689 ttgctccttccttttttttcaaaaccctcccct 28437721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5968090 - 5968244
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  5968090 atacaatttttgagttcccccaaatgagggggattttttgttatgagtaaaaaattaacctccaaagcgctttcctcccaatgtcttctatttcttccac 5968189  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | ||||||||||||||||  |||| | ||||||| |||||    
T  5968190 ttgctccttcctttt-tccaaaaccctcccctcccctccctttcaaactcccaaac 5968244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36747331 - 36747175
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  36747331 atacaatttttgagatcacccaaatgagggggatttcttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttccac 36747232  T
Q  101 ttgctccttc-cttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||  |||| | ||||||||||||||||  ||||||||||||||||||||    
T  36747231 ttgctccttcatttttttccaaaaccctcccctcccctcccctccaaactctcaaac 36747175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 47276053 - 47276205
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  47276053 aatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctccaaatgtcttctatttcttccatttgc 47276152  T
Q  105 tccttccttttctgc-aaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| |||||| | | |||||||||||||||  |||| ||||||||| |||||    
T  47276153 tcctccctttttttcaaaaaccctcccctcccctcccatccaaactcccaaac 47276205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 42620399 - 42620512
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42620399 atacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 42620497  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  42620498 ttgctcattcctttt 42620512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 33810259 - 33810414
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  33810259 atacaatttttgagttctcccaaatgagggggatattttcttatgagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccac 33810358  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || || ||||||||| | |||||| ||||| |||  | | |||||||||| |||||    
T  33810359 ttacttcttccttttttccaaaactctcccatccccttcgctccaaactcccaaac 33810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33113686 - 33113821
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattat---gagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttc 97  Q
    |||||||||||||||||||| |||||||||||||||||| ||||   ||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  33113686 atacaatttttgagttcccc-aaatgagggggatttttttttatcatgagtagaaaattaacctccaaagccctctcctcccaatgtcttctatttcttc 33113784  T
Q  98 cacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||| |  |||||||||||||||    
T  33113785 cacttgctccttccttttttctaaaaccctcccctcc 33113821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 19644335 - 19644206
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||| || ||| ||||| ||||||||||||    
T  19644335 atacaatttttgagttcccctaaataagggggattttttattatgattaaaaaattaacctccaaagctctctcatctcaatgtcttgtatttcttccac 19644236  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    ||||||||||||||| | ||||||||||||    
T  19644235 ttgctccttccttttttccaaaaccctccc 19644206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7667211 - 7667367
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||   |||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7667211 atacaatttttgaagccccctaaatgagggggattttttattattaggaaaaaattaacctccaaagctctctcctcccaatgtcttctatttcttccac 7667310  T
Q  101 ttgctccttc-cttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||  |||| | ||||||||||||||||  |||||||||||||| |||||    
T  7667311 ttgctcattctattttttccaaaaccctcccctcccctcccctccaaactcccaaac 7667367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 41002302 - 41002427
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| || | ||| ||||||||||||||||||    
T  41002302 aatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaattaacctccagaaccctctccttccgatgtc-tctatttcttccacttgc 41002400  T
Q  105 tccttccttttctgcaaaaccctcccc 131  Q
    |||||| |||| | |||||||||||||    
T  41002401 tccttcattttttccaaaaccctcccc 41002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 43188904 - 43188771
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  |||||||||| ||| || |  |||||||||| |    
T  43188904 atacaatatttgagttcccccaaatgaggtgaattttttattatgagtaaaaaattaacctccaagaccctctcctctcaatgtttcatatttcttcccc 43188805  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  43188804 ttgctccttccttttttccaaaaccctcccctcc 43188771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 46745634 - 46745780
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||| |||||||| | || |||||| |||| |||| ||  ||||||||||| ||||||    
T  46745634 atacaatttttgagttcccccaaatgagagggattttgcattatgaataaaaaatcatcccccaaagtcctcccctctcat-gtcttctattttttccac 46745732  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaac 148  Q
    ||||||||||||||| | ||||||||||||||||  ||||||||||||    
T  46745733 ttgctccttccttttttccaaaaccctcccctcccctcccctccaaac 46745780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 46449208 - 46449076
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||  | || ||||||||||||    
T  46449208 atacaatttttgagttccct-aaatgagggagattttttattatgagtaaaaaattaaccttcaaaaccctctcttcccaatattttttatttcttccac 46449110  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||| |||||||| | ||||||||| ||||||    
T  46449109 ttgctcattccttttttccaaaaccctgccctcc 46449076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 43778623 - 43778727
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||    
T  43778623 atacaattttttagttccttcaaatgaggggaattttttattatgagtaaaaaattaacctccatagccctcttcttccaatgtcttctatttcttccac 43778722  T
Q  101 ttgct 105  Q
    |||||    
T  43778723 ttgct 43778727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 27385990 - 27385915
Alignment:
Q  172 tttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27385990 tttggtgacattgaggtgccaatgtcatgtgacgttggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 27385915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 38505381 - 38505536
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||  ||||||||||||||||| || |||| ||||||||  ||||  | | || ||||||||||| |||||||   || ||||||||||||||    
T  38505381 atacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcccctcccattttcctctatttcttccac 38505480  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || |||||||| ||||||||||||||| |||||    
T  38505481 ttgctcattccttttttcccaagccttcccctcccttcccctccaaactcgcaaac 38505536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44720123 - 44719979
Alignment:
Q  1 atacaatttttgagttcccc-caaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||| |  |||||||     ||||||||||||||| |    
T  44720123 atacaatttttgagttcccctcaaatgagagagattttttattacgagtaaaaaattaacctccaaaactatctcctc----tgtcttctatttcttcta 44720028  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaact 149  Q
    ||| ||||||  |||| |  |||||||||| ||||  |||||||||||||    
T  44720027 cttactcctt-attttttttaaaaccctcctctcccctcccctccaaact 44719979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15748996 - 15749151
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  ||||||   |||||||||||||||||    
T  15748996 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctatttcttccac 15749095  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || |||||||| ||||||||||||||| |||||    
T  15749096 ttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaac 15749151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19644202 - 19644137
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 66  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  19644202 atacgatttttgagttcccccaaatgaggggggttttttattatgaggaaaaaattaaccttcaaa 19644137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 16648971 - 16648899
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||| |||||||||| ||||| |||||||||    
T  16648971 ggtgacattggggtgccaatgtcatgtgacattggcaaaccacaatttcacaagtgtacaaaatgacaaaaaa 16648899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 17623332 - 17623260
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||| |||||||||| ||||| |||||||||    
T  17623332 ggtgacattggggtgccaatgtcatgtgacattggcaaaccacaatatcacaagtgtacaaaatgacaaaaaa 17623260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38137975 - 38137861
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||| ||||||| |||||||||||||| ||||||| ||||||||   |||||| ||||||| |||| |||| |||||||| ||| || ||||||||||    
T  38137975 atacaaattttgagctcccccaaatgaggaggattttgtattatga-agaaaaatgaacctcctaaagtcctcccctcccaatgtcctccatttcttcca 38137877  T
Q  100 cttgctccttcctttt 115  Q
    | ||||||||||||||    
T  38137876 cgtgctccttcctttt 38137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6746616 - 6746768
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||    |||| |||||| |  ||||| | | || ||||||||||| |||||||   |||||||   |||||||    
T  6746616 atacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaaaattaaccccccaaagccctcccctcccattttcttcta---cttccac 6746712  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | |||| ||||||||||  |||||||| |||||| |||||    
T  6746713 ttgctcattccttttttccaaatccctcccctcacttcccctctaaactcacaaac 6746768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 33491173 - 33491234
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtca 224  Q
    ||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  33491173 gggtagcactttgatgatattggggtgccaatgtcatgtgacattggccaaccacaatgtca 33491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 6980849 - 6980924
Alignment:
Q  160 aaggggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaa 236  Q
    |||||||||||||| |||||||||||||||||||| |||  ||  ||||||||||||||||||||||||||| ||||    
T  6980849 aaggggtagcactt-ggtgacattggggtgccaatgtcacatgtcattggccaaccacaatgtcacaagtgtacaaa 6980924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 7391526 - 7391603
Alignment:
Q  73 tcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||| ||| |||||||||||||||||| | |||||||||||| | | ||||||| |||||| |||||||||||||||    
T  7391526 tcctctcaatgtcttctatttcttccacctactccttcctttttttccaaacccttccctccattcccctccaaactc 7391603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 23325720 - 23325781
Alignment:
Q  73 tcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||||||    
T  23325720 tcctcccaatgtcttctatttcttccacttactccttccttttttccaaaaccgtcccctcc 23325781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19791724 - 19791566
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||| |||||||| || |||  ||||||||  ||||  ||||||||||||| |||| |||||||     |||||||||||||||    
T  19791724 atacaattttttagttcccc-aaatgaggtgggtttagtattatgaagaaaag-ttaacctccaaagtcctcccctcccatttgtttctatttcttccac 19791627  T
Q  101 ttgctccttccttttctgcaaaa-----ccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | |||     ||||||||||| ||||||||||||||| |||||    
T  19791626 ttgctcattccttttttcccaaaccttcccctcccctcccttcccctccaaactcgcaaac 19791566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 6981021 - 6980958
Alignment:
Q  167 agcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    ||||||| ||||| ||| |||||||||| |||||||| |||||||||||||||||| |||||||    
T  6981021 agcacttgggtgaaattagggtgccaatgtcatgtgacattggccaaccacaatgttacaagtg 6980958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 42113090 - 42113136
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctc 133  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||    
T  42113090 tctatttcttccacttgctccttccttttttccaaaaccctcccctc 42113136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 18788900 - 18788805
Alignment:
Q  34 ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctccc 130  Q
    |||| |||||||||| |||| |||||| |||||| | ||| || |||| || |||||||||||||||||||||||| ||||| | ||||| ||||||    
T  18788900 ttttgtattatgagttaaaa-ttaaccaccaaagtcatcttcttccaatgttttctatttcttccacttgctcctttctttttttcaaaatcctccc 18788805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 34399087 - 34399234
Alignment:
Q  4 caatttttgagtt-cccccaaatgagggggattttttattatgagtaaaaaattaacctc-caaagccctctcctcccaacgtcttctatttcttccact 101  Q
    ||||||||||||| |||||||||||  |||||||| |||||| ||  |||||| |||| | |||||||||| |||  ||| || ||| ||||||||| ||    
T  34399087 caatttttgagttccccccaaatgatagggattttgtattataag-gaaaaatgaacccctcaaagccctcccctatcaaagttttccatttcttcctct 34399185  T
Q  102 tgctccttccttttctgcaaaaccctcccctcctttcc-cctccaaact 149  Q
    |||| ||||||||| | ||||  |||||||||| |||| ||||||||||    
T  34399186 tgcttcttccttttttccaaagtcctcccctcccttcctcctccaaact 34399234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 42494940 - 42494872
Alignment:
Q  161 aggggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagt 229  Q
    |||||||| | || |||||||||| ||||||||| |||||||| ||||| |||||||||||| ||||||    
T  42494940 aggggtagtatttgggtgacattgtggtgccaatgtcatgtgacattggtcaaccacaatgttacaagt 42494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42220072 - 42219958
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| | |||||| || | |||||| |||||||| ||||| ||||||  |||||  ||||||||  |||  | ||||||||||| |||    
T  42220072 atacaatttttgagtttctccaaataagagagattttatattatgaataaaatattaacgaccaaaatcctctcctaacaatattttctatttctttcac 42219973  T
Q  101 ttgctccttcctttt 115  Q
    ||| ||||| |||||    
T  42219972 ttgatccttactttt 42219958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14676256 - 14676152
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||| |   |||||| ||||||||||||| || || | |||  || | ||||||||||||    
T  14676256 atacaatttttgagttcccacaaatgaggaggatttagtattat-aaagaaaaatgaacctccaaagccttccccactcaatctcatatatttcttccac 14676158  T
Q  101 ttgctc 106  Q
    ||||||    
T  14676157 ttgctc 14676152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 42854274 - 42854127
Alignment:
Q  8 ttttgagttcccccaaatgagggggattttttatt-atgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctc 106  Q
    ||||||||||||||| |||||| ||||||| |||| ||||  ||||| | |||| || | |||||| ||   ||| ||| |||| || || |||||||||    
T  42854274 ttttgagttcccccacatgaggaggattttgtatttatgaagaaaaa-taaaccccccaggccctccccaatcaaagtcctctaattttttcacttgctc 42854176  T
Q  107 cttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||| | |||| ||||||||||| |||||||||||| || |||||    
T  42854175 cttcctttt-tccaaagccctcccctcccttcccctccaaattcacaaac 42854127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 42471374 - 42471334
Alignment:
Q  75 ctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  42471374 ctcccaacgtcttctatttcttccatttgctccttcatttt 42471334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16805614 - 16805769
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||| |  | |||| ||||||||  ||||  | |||| |||||||||||  ||||||   || ||| ||||||||||    
T  16805614 atacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaagttaaacccccaaagccctcctctcccattttcctctctttcttccac 16805713  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||  |||||||| | | ||  | |||||||| ||||||||||||||| |||||    
T  16805714 ttacttattccttttttcccaagtcttcccctcccttcccctccaaactcgcaaac 16805769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45940447 - 45940549
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| || |||||||||  ||||||   ||||||||||||||||    
T  45940447 atacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaaccccctaaagccctcatctcccattttcttctatttcttcca 45940545  T
Q  100 cttg 103  Q
    ||||    
T  45940546 cttg 45940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 30183812 - 30183727
Alignment:
Q  73 tcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccc--tcctttcccctccaaactctcaaac 156  Q
    |||| |||| ||| |||||||||||||||||||||||||| || |  ||| ||||||||  ||| |||||||| |||||| |||||    
T  30183812 tccttccaaagtcatctatttcttccacttgctccttcctattttcgaaagccctcccccatcccttcccctctaaactcgcaaac 30183727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31891320 - 31891206
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| ||||||||||| ||||  | ||||| ||||||||  |||||   |||||||| | ||||||| |||||| ||| ||||||||||||      
T  31891320 atacaagtttttagttcccccaattgagaagcattttgtattatgaagaaaaatgaaacctccataaccctctcatcccaatgtcctctatttcttcctt 31891221  T
Q  101 ttgctccttcctttt 115  Q
    ||||| ||| |||||    
T  31891220 ttgcttctttctttt 31891206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43348276 - 43348377
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||| ||| ||||||  ||||||||  ||||| |||||  ||||||| ||| |||||||   || |||||||||| |||    
T  43348276 atacaattttttagttcccccaaataaggaggatttagtattatga-aaaaaagttaactcccaaagctctcccctcccattttcctctatttctttcac 43348374  T
Q  101 ttg 103  Q
    |||    
T  43348375 ttg 43348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 43665199 - 43665249
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaat 55  Q
    |||||||||||| | ||||||||||  ||||||||||||| ||||||||||    
T  43665199 aatttttgagtttctccaaatgaggtagattttttattataagtaaaaaat 43665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 48583451 - 48583405
Alignment:
Q  185 gggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgt 231  Q
    |||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  48583451 gggtgccaatgtcatgtgacattggtcaaccacaatgtgacaagtgt 48583405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 28437403 - 28437366
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  28437403 caaagccctcccctcccttcccctccaaactctcaaac 28437366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 42494776 - 42494829
Alignment:
Q  177 tgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    ||||||||||||   ||| |||||||| |||||| |||||||||||||||||||    
T  42494776 tgacattggggtattaatgtcatgtgacattggcaaaccacaatgtcacaagtg 42494829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 6635782 - 6635711
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgc--aaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||| |||||||||| |||| | |  |||||||||||||| |||| | ||||||||| |||||    
T  6635782 tctatttcttccaattgctccttcatttttttcctaaaaccctcccctcatttctcatccaaactcgcaaac 6635711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 19644514 - 19644542
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaa 147  Q
    |||||||||||||||||||||||||||||    
T  19644514 caaaaccctcccctcctttcccctccaaa 19644542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 23550774 - 23550695
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctccc 130  Q
    ||||||||||| ||||| ||||| ||||||||  || | ||||||||| |||| |||||||||||| | |||||| |||||    
T  23550774 aaaaattaacccccaaa-ccctcccctcccaatatcctatatttcttctactttctccttccttttttccaaaactctccc 23550695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 115
Target Start/End: Complemental strand, 30080920 - 30080892
Alignment:
Q  87 tctatttcttccacttgctccttcctttt 115  Q
    |||||||||||||||||||||||||||||    
T  30080920 tctatttcttccacttgctccttcctttt 30080892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 32851964 - 32851996
Alignment:
Q  83 gtcttctatttcttccacttgctccttcctttt 115  Q
    |||||||||||||| ||||||||||||||||||    
T  32851964 gtcttctatttctttcacttgctccttcctttt 32851996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 32852074 - 32852106
Alignment:
Q  83 gtcttctatttcttccacttgctccttcctttt 115  Q
    |||||||||||||| ||||||||||||||||||    
T  32852074 gtcttctatttctttcacttgctccttcctttt 32852106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 35902111 - 35902075
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaa 155  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  35902111 caaaaccctcccctcccttcccctccaaactcccaaa 35902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36906221 - 36906088
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36906221 atacaatttttgagttcccccaaatgagggggattttttattacgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 36906122  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  36906121 ttgctccttccttttttccaaaaccctcccctcc 36906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34272549 - 34272393
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  34272549 atacaatttttgagtttccccaaatgagggggattttttattatgagtaaaagattaacctccaaagccctctcctctcaatgtcttctatttcttccac 34272450  T
Q  101 ttgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| |||| | ||||| |||||||||| ||||||| ||||||| |||||    
T  34272449 ttgctccttcctttttttccaaaatcctcccctcccttccccttcaaactcccaaac 34272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37659578 - 37659733
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  37659578 atacaatttttgagttcccctaaatgagagggattttttattattagtaaaaaattaacatccaaagccctctcctcccaatgtcttctatttcttccac 37659677  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |  |||||||||||| | |||||||||||||||| ||||||| ||||||| |||||    
T  37659678 tcactccttccttttttccaaaaccctcccctcccttccccttcaaactcccaaac 37659733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6853 - 6697
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  6853 atacaatttttgagtttccccaaatgagggagatttttttattatgagtaaaaaattaacctccaaagctctctcctcccaatgtcttctatttcttcca 6754  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| | ||||||||||||||||  |  ||||||||||| |||||    
T  6753 cttgctccttccttttttccaaaaccctcccctcccctatcctccaaactcccaaac 6697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 36102937 - 36103085
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  36102937 atacaaattttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctccacccaatgtcttctatttcttccac 36103036  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaact 149  Q
     | |||||||||||| | ||||| ||||||||||  || ||||||||||    
T  36103037 ctactccttcctttttttcaaaatcctcccctcccctctcctccaaact 36103085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 4734551 - 4734676
Alignment:
Q  9 tttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctcct 108  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  4734551 tttgaggtcccccaaatgagaggaattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctcct 4734650  T
Q  109 tccttttctgcaaaaccctcccctcc 134  Q
    ||||||| | ||||||||||||||||    
T  4734651 tccttttttccaaaaccctcccctcc 4734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 3404625 - 3404775
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    |||||| ||||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||||||    
T  3404625 aattttcgagttcccc-aaatgagggagattttttattaagagtaaaaaattaatctccaaagccttctcctcctaatgtcttctatttcttccacttgc 3404723  T
Q  105 tccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| | ||||||||||||||||  |||||||||||||| |||||    
T  3404724 tccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaac 3404775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2474813 - 2474946
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  2474813 atacaatttttaagttctcccaaatgaggaggattttttattatgagtaaaaaattaatctccaaaaccctctcctcccaatgtcttctatttcttccac 2474912  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    || |||||||||||| | ||||| ||||||||||    
T  2474913 ttactccttcctttttttcaaaatcctcccctcc 2474946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 25033414 - 25033281
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  25033414 atacaatttttgagttcccccaaatgaggatgattttttattatgagtaaaaaattaacctccaaagctctctcctcccgatgtcttctatttcttccac 25033315  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    || |||||||||||| |  |||| ||||||||||    
T  25033314 ttactccttccttttttctaaaatcctcccctcc 25033281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 34304749 - 34304617
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||  || ||||||||||||||||||    
T  34304749 atacaatttttgagttcccccaaatgagggg-attttttattatgagtaaaaaattaaccttcaaagccctctcatcttaatgtcttctatttcttccac 34304651  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||| | ||||||||    
T  34304650 ttgctccttccttttttccaaaatcttcccctcc 34304617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 13865139 - 13865271
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||||||||    
T  13865139 atacaatttttgagttcccc-aaataagggggattttttattatgagtaaaaaattaaccttcaaagtcctttcctccgaatgtcttctatttcttccac 13865237  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| | ||||| ||||||||||    
T  13865238 ttgctccttcattttttccaaaatcctcccctcc 13865271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 1942124 - 1942228
Alignment:
Q  45 gagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctcc 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||    
T  1942124 gagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgatccttcctttt-ttcaaaaccctcccctcccttcccctcc 1942222  T
Q  145 aaactc 150  Q
    ||||||    
T  1942223 aaactc 1942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 29612025 - 29611893
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29612025 atacaattttttaattcccccaaatgagagg-attttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttatatttcttccac 29611927  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||| || |||||    |||||||||||||||    
T  29611926 ttgctcatttctttttccaaaaaccctcccctcc 29611893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31297395 - 31297527
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||| ||||||||    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  31297395 atacaattttttagttcccc-aaatgaggttttttttttattatgagtaaaaaattaaccttcaaagccatctcctcccaatgtcttctatttcttccac 31297493  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| | ||||||||||| ||||    
T  31297494 ttgctccttcattttttccaaaaccctcctctcc 31297527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 43733167 - 43733322
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| | ||||| ||||||||| ||||||| |||||||| |||||| |||||| | ||||||||||||| |||| |||||||||||||||| |    
T  43733167 atacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaagttaacccctaaagccctctccttccaatgtcttctatttcttcctc 43733266  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||| ||| | ||||||||||||||    |||||||||||||| |||||    
T  43733267 ttgctcattccctttttccaaaaccctcccctttcctcccctccaaactcccaaac 43733322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 34349719 - 34349602
Alignment:
Q  40 attatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccct--ccttt 137  Q
    |||||||||||||||||||| |||||||||||||| |||||| || || |||||||| ||||||||||||| |||| | ||||||||||||||  ||  |    
T  34349719 attatgagtaaaaaattaacatccaaagccctctcatcccaatgttttttatttctt-cacttgctccttcttttttttcaaaaccctcccctcccccct 34349621  T
Q  138 cccctccaaactctcaaac 156  Q
    ||||||||||||| |||||    
T  34349620 cccctccaaactcccaaac 34349602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 3647553 - 3647479
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||    
T  3647553 gggtagcacttgggtgacattggggtgccaatgtcatgtgacattggccaaccacaatgacacaagtgtacaaaa 3647479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 39193965 - 39193836
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| ||||||||||||||| | || |||| ||||||||  ||||| | | || ||||||||||| |||||||| ||  ||||||||||||||    
T  39193965 atacaactttttagttcccccaaatgaagagggttttatattatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctatttcttccac 39193866  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    ||||| ||||||||| | ||||||||||||    
T  39193865 ttgctacttccttttttccaaaaccctccc 39193836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 79660 - 79816
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||| || |||  ||||||||  ||||  | | || ||||||||||| |||||||   || ||||||||||||||    
T  79660 atacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaacgtaaccccccaaagccctcccctcccattttcctctatttcttccac 79759  T
Q  101 ttgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||| |||| | | || || |||||||| ||||||||||||||| |||||    
T  79760 ttgctcgttcctttttttcccaagccttcccctcccttcccctccaaactcgcaaac 79816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 18183016 - 18183100
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||||| ||||||||| |||  ||| |||| ||||||||||||||||| | |||||||| |||||||||    
T  18183016 gggtagcactttggtgacattgaggtgccaatgtcacatgacattgaccaaccacaatgtcacaggcgtgcaaaaagacaaaaaa 18183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 21173909 - 21174059
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||| |||||| |||||||||| || |||| ||||||||  ||||  |||||| |||||||||||  ||||||   |||||||||||||||||||||    
T  21173909 aattttttagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcccattttcttctatttcttccacttgc 21174007  T
Q  105 tccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || |||||||| | | || |  |||||||| |||| |||||||||| |||||    
T  21174008 tcattccttttttcctaagcattcccctcccttccactccaaactcgcaaac 21174059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40985121 - 40985173
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaa 53  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  40985121 atacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaa 40985173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1839867 - 1839977
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||| || |||| |||| |||  |||||     |||||||||||| ||| |||||| ||| ||||||||||||||    
T  1839867 atacaatttttaagttcccccaaatgaggagggttttatattttgaagaaaaataagccctccaaagccc-ctcttcccaatgtcctctatttcttccac 1839965  T
Q  101 ttgctccttcct 112  Q
    || |||||||||    
T  1839966 ttactccttcct 1839977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 6839844 - 6839943
Alignment:
Q  16 tcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||| ||||||||||| ||||| |||||||| ||||||||||||||| |||   ||||| || ||  ||||||||||||||  |||||||| ||||||||    
T  6839844 tccctcaaatgaggggaattttatattatgaataaaaaattaacctctaaaaatctctcatctcagtgtcttctatttcttttacttgctcattcctttt 6839943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 40999241 - 40999369
Alignment:
Q  27 agggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccc 126  Q
    ||||| ||||| |||||||| ||| ||||||| ||||||| | |||||||| ||| |||||||||||||| || ||| |  ||| |||||| ||||||||    
T  40999241 aggggtattttgtattatgaataataaattaatctccaaaactctctcctctcaatgtcttctatttctttcatttg-ttgttcattttctccaaaaccc 40999339  T
Q  127 tcccctcctttcccctccaaactctcaaac 156  Q
    || | ||   |||||||||||||| |||||    
T  40999340 tctcatctcctcccctccaaactcccaaac 40999369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 1840313 - 1840385
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||  |||| || ||| || |||||||||||||||||||||||||| | |||| |||||||||||    
T  1840313 ccaaagccctcctctccgaatgtcctcaatttcttccacttgctccttccttttttccaaacccctcccctcc 1840385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 7251522 - 7251562
Alignment:
Q  207 tggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  7251522 tggccaaccacaatgtcacaagtgtgcaaaatgacaaaaaa 7251562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23932605 - 23932759
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  ||| ||   || ||||||||||||||    
T  23932605 atacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctctcattttcctctatttcttccac 23932703  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||  |  |||||||| | | || || |||| ||| ||||||||||||||| |||||    
T  23932704 ttatttattccttttttcccaagccttcccttcccttcccctccaaactcgcaaac 23932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26772689 - 26772843
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||  ||||||| | || |||| ||||||||  ||||  ||||||||| ||  ||||  ||||||   |||||||||||||||||    
T  26772689 atacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaag-ttaacctcccaaagcctcctctcccattttcttctatttcttccac 26772787  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || ||| |||| || |||||||||||| |||||    
T  26772788 ttgctcattccttttttcctaagccttcctctccctttccctccaaactcgcaaac 26772843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 28169911 - 28169797
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||| ||||||||||||||||||| ||  ||||||| ||||||||  |||||   ||||| | || ||||  | |||||| ||||||||||  ||||||    
T  28169911 atacattttttgagttcccccaaattagaaggattttgtattatgaagaaaaatgaaaccttccaaaccctaccatcccaaagtcttctattctttccac 28169812  T
Q  101 ttgctccttcctttt 115  Q
    || ||||||||||||    
T  28169811 ttcctccttcctttt 28169797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 43417523 - 43417585
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||||| || |||| |||||    
T  43417523 ggtgacattggagtgtcaatgtcatgtgatattggctaaccacaatgtcgcaggtgtacaaaa 43417585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 31149872 - 31149803
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||||||| ||| | || | |||||| |||| |||| ||||||||||||||| |||||    
T  31149872 tctatttcttccacttgctcattcatgttttccaaaacactccactcccttcccctccaaactcgcaaac 31149803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 3635611 - 3635678
Alignment:
Q  89 tatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||| ||||||||| || ||||| | |||||||||| | ||| ||||||||||||||| |||||    
T  3635611 tatttctttcacttgctcatttcttttttccaaaaccctctcatcccttcccctccaaactcgcaaac 3635678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 3647390 - 3647440
Alignment:
Q  196 tcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaa 246  Q
    |||||||||||||| |||| |||||||||||||||| |||||  |||||||    
T  3647390 tcatgtgatattgggcaactacaatgtcacaagtgtacaaaataacaaaaa 3647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 14581880 - 14581949
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||  |||||| |||||||| | | || || |||||||||||||||| ||||||| |||||    
T  14581880 tctatttcttccggttgctcattccttttttcccaagccttcccctcctttcccctgcaaactcgcaaac 14581949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 34148442 - 34148405
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  34148442 caaaaccctcccctcccttcccctccaaactcccaaac 34148405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 34336027 - 34335962
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||| |||||| ||||||||||| |||||||   || | |||||||||||||||||| ||||||||    
T  34336027 aaaagttaacccccaaagccctcccctcccattttcctttatttcttccacttgctcattcctttt 34335962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 44365634 - 44365675
Alignment:
Q  206 ttggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||||||||||| | ||||||||||| ||||||||    
T  44365634 ttggccaaccacaatgtcataggtgtgcaaaagaacaaaaaa 44365675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 7080390 - 7080478
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||||||||||||||||||  ||   |||||||||||||| ||| |||| ||| | | ||| |||||||| | ||||||| |||||||    
T  7080390 ccaaagccctctcctcccaatatcaaatatttcttccacttactctttccattttttccaaatcctccccttccttccccttcaaactc 7080478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 31470875 - 31470839
Alignment:
Q  200 gtgatattggccaaccacaatgtcacaagtgtgcaaa 236  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  31470875 gtgacattggccaaccacaatgtcacaagtgtacaaa 31470839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 31598537 - 31598620
Alignment:
Q  72 ctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||| |||| ||| |||||||||||||||| |||| ||||||| | | ||||||||| || | || |||||||||||| |||||    
T  31598537 ctccttccaatgtcctctatttcttccacttactcc-tcctttttttccaaaccctcctctaccttaccctccaaactcacaaac 31598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3038993 - 3039150
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga--gtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  3038993 atacaatttttgagttcccccaaatgagggggattttttattatgatcgtaaaaaattaaccttcaaagccctctcctcccaatgtcttctattttttcc 3039092  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||||||||| |||||    
T  3039093 acttgctccttcctttttttcaaaaccctctcctcctctcccctccaaactcccaaac 3039150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 18018643 - 18018798
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  18018643 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatgtcttctatttctttcac 18018742  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||| ||||||||| | ||||||||||||||||  ||||||| |||||| |||||    
T  18018743 ttgcttcttccttttttccaaaaccctcccctcccctcccctcgaaactcccaaac 18018798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30312452 - 30312585
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  30312452 atacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatgtgttctatttcttccac 30312551  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  30312552 ttgctccttccttttttccaaaaccctcccctcc 30312585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12964019 - 12964174
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12964019 atacaattttggagttcccccaaatgatggagattttttattatgagtaaaaaattaacctccaaagctctctcctcccaatgtcttctatttcttccac 12964118  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | |||||||||||||||   |||||||| ||||| |||||    
T  12964119 ttgctccttccttttttccaaaaccctcccctctcctcccctcccaactcccaaac 12964174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31550296 - 31550451
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||    
T  31550296 atacaatttttgagttcccctaaatgaggggaattttttattatgagtaaaaaattaacctcaaaagccctcttctccaatcgtcttctatttcttccac 31550395  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | ||||||||||||||||  ||| |||||||||| |||||    
T  31550396 ttgctccttccttttttccaaaaccctcccctcccctccactccaaactcccaaac 31550451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 18780418 - 18780261
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccca--acgtcttctatttcttcc 98  Q
    ||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  18780418 atacaatttttgagttcccccaaatgaaggggatttctttttaggagtaaaaaattaacctccaaagccctctcctcccaatatgtcttctatttcttcc 18780319  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || |||||||||||||| | ||||||||||||||||  |||||||||||||| |||||    
T  18780318 acgtgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaac 18780261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1725944 - 1725800
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||||||||    
T  1725944 atacaatttttgagttcccccagatgagggggattttttattatgagtaaaaaattaacctccaaaaccccctcctcccaatgttttctatttcttccac 1725845  T
Q  101 ttgctccttcc-ttttctgcaaaaccctcccctcctttcccctcc 144  Q
    ||||||||||| |||| | ||||||||||||||||  ||||||||    
T  1725844 ttgctccttcctttttttccaaaaccctcccctcccctcccctcc 1725800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3119898 - 3120052
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||| |    
T  3119898 atacaatttttgagttcccc-aaatgaaggggattttttattatgagtaaaaaattaacctccaaaaccatctcctcgcaatgtcttctatttcttcccc 3119996  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| ||| |||| | ||||||||||||||||| ||||||||||| ||||||||    
T  3119997 ttgctcattctttttttccaaaaccctcccctcctctcccctccaaaatctcaaac 3120052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 8555823 - 8555954
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  8555823 atacaattttttagttcccccaaatgagggggattttttattacgagtaaaaaattaacctccaaaaccctcttctcccaatgtcttctatttcttccac 8555922  T
Q  101 ttgctccttccttttctgcaaaaccctcccct 132  Q
    ||||||||||||||| |  |||||||||||||    
T  8555923 ttgctccttccttttttcaaaaaccctcccct 8555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 4041998 - 4041865
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  4041998 atacaatttttgagttccttcaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccaatatcttctatttcttccac 4041899  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    | |||||||| |||| | ||||||||||||||||    
T  4041898 tcgctccttctttttttccaaaaccctcccctcc 4041865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32243509 - 32243376
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  32243509 atacaatttttgagttcccccaaatgaggatgattttttattatgattaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccca 32243410  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||| ||| | ||||||||||||||||    
T  32243409 ttgctccttccattttttcaaaaccctcccctcc 32243376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36567325 - 36567457
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  36567325 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttccac 36567424  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||| ||||| | |||||| |||||||||    
T  36567425 ttgctcctt-cttttttccaaaactctcccctcc 36567457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8991010 - 8991163
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  8991010 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaagccatctccttccaatgtcttctatttcttccac 8991109  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || || |||  |||| | ||||||||||||||||  |||||||||||||| |||||    
T  8991110 ttccttctt--ttttttccaaaaccctcccctcccctcccctccaaactcccaaac 8991163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18826273 - 18826412
Alignment:
Q  1 atacaatttttgagttcccccaaatgaggggga------ttttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttc 94  Q
    |||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  18826273 atacaatttttgagttcccccaaatgagggggaggggaattttttattatgagtaaaaaattaacctccaaagccctctcttcctaatgtcttctatttc 18826372  T
Q  95 ttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  18826373 ttccacttgctccttccttttttccaaaaccctcccctcc 18826412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10165449 - 10165294
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| ||||||    
T  10165449 atacaattttttagttcccccaaatgaggggtattctttattatgagtaaaaaattaaccttcaaaaccctctcctcccaatgtcttctattttttccac 10165350  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||| |||||||||   |||||| ||||| |||| |||||||||||||| |||||    
T  10165349 ttgcttcttcctttttaccaaaactctcccttcctctcccctccaaactcccaaac 10165294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25960657 - 25960784
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  25960657 atacaatttttgagttcccccaaatgagggagattttctattatgagtaaaaaattaacctccaaagccctctcctttcaatgtcttctatttcttccac 25960756  T
Q  101 ttgctccttccttttctgcaaaaccctc 128  Q
    ||||||||| ||||| | ||||||||||    
T  25960757 ttgctcctttcttttttccaaaaccctc 25960784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8410977 - 8411111
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||    
T  8410977 atacaatttttgagttcccccaaatgaggggaattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcctcaac 8411076  T
Q  101 ttgctccttc-cttttctgcaaaaccctcccctcc 134  Q
    ||||||||||  |||| | ||||||||||||||||    
T  8411077 ttgctccttcatttttttccaaaaccctcccctcc 8411111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 14008379 - 14008529
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||| |    
T  14008379 aatttttgagttcccccaaatgagaag-attttttattttgagtaaaaaattaacctccaaagccatctcatcccaatgtcttctatttcttccacttac 14008477  T
Q  105 tccttc-cttttctgcaaaaccctcccctcctttcccctccaaactctcaaa 155  Q
    ||||||  |||| | |||||||||||||||| ||||||||||||||| ||||    
T  14008478 tccttcttttttttccaaaaccctcccctcccttcccctccaaactcccaaa 14008529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19382911 - 19382797
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||    
T  19382911 atacgatttttgagttcccc-aaatgagggggattttttattatgagtaaaaaattaacctacaaagccctttcctctcaatgtcttctatttcttccac 19382813  T
Q  101 ttgctccttccttttc 116  Q
    ||||||||||||||||    
T  19382812 ttgctccttccttttc 19382797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 13765986 - 13766118
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||    
T  13765986 atacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctctaaagccctcttctaccaatgtcttctatttcttccac 13766084  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    | ||||||||| ||| | ||| ||||||||||||    
T  13766085 tcgctccttccatttttccaataccctcccctcc 13766118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 38293922 - 38293785
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctct-----cctcccaacgtcttctatttct 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||     |||||||| |||||||||||||    
T  38293922 atacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaagaccctcttctcccctcccaatgtcttctatttct 38293824  T
Q  96 tccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||| |||||||| | ||||||||||||||||    
T  38293823 tccacttgctcattccttttttccaaaaccctcccctcc 38293785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 44137151 - 44137053
Alignment:
Q  36 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  44137151 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccatttgctccttccttttttccaaaaccctcccctcc 44137053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38023493 - 38023625
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||| ||    
T  38023493 atacaatttttgagttcccc-aaatgagagagattttttattatgagtaaaaaattaacctccaaaaccctctcctttcaatgtcttctatttcttctac 38023591  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||| |||| | ||||| ||||||||||    
T  38023592 ttgctccttcattttttccaaaatcctcccctcc 38023625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44020388 - 44020275
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||  || ||||||||| |||| ||||||||||||||||||    
T  44020388 atacaatttttgagttccctcagatgagggagattttttattatgagtaaaaaattaacctctcaaaccctctccttccaatgtcttctatttcttccac 44020289  T
Q  101 ttgctccttccttt 114  Q
    |||||| |||||||    
T  44020288 ttgctcattccttt 44020275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 18562039 - 18561908
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||| |||||||| ||||||    
T  18562039 aatttttgagttccatcaaatgagggagattttttattatgagtaaaaaattaaccttcaaagtcatctcctcccaatgtcttcaatttcttctacttgc 18561940  T
Q  105 tccttcc-ttttctgcaaaaccctcccctcct 135  Q
    | ||||| |||| | |||||||||||||||||    
T  18561939 ttcttccttttttttcaaaaccctcccctcct 18561908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 725986 - 725856
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaa-ttaacctccaaagccctctcctcccaacgtcttctatttcttccacttg 103  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||| ||||  |||||||||||||||||||     
T  725986 aatttttgagttcctccaaatgagggagattttttattatgaataaaaaaattaacctctaaagccctctccttccaatttcttctatttcttccactta 725887  T
Q  104 ctccttccttttctgcaaaaccctcccctcc 134  Q
    ||  |||||||| | ||||||||||||||||    
T  725886 cttattcctttttttcaaaaccctcccctcc 725856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40357491 - 40357414
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40357491 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 40357414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31899390 - 31899468
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 79  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31899390 atacaatttttgagttcccccaaattaggggaattttttattatgagtaaaaaattaacctccaaagccctctcctccc 31899468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4003462 - 4003307
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||| |  |||| ||||||||  ||||| | | || ||||||||||| |||||||   || ||||||||||||||    
T  4003462 atacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaagccctcccctcccattttcctctatttcttccac 4003363  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | |||| ||||||||||| |||| |||||||||| |||||    
T  4003362 ttgctcattccttttttccaaagccctcccctcccttccactccaaactcacaaac 4003307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6711876 - 6711987
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttt---ttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttc 97  Q
    |||||||| ||||||||||| ||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  6711876 atacaattgttgagttcccctaaatgagagggatttttttttattatgagtaaaaaattaacttccaaagccctctcctctcaatgtcttctatttcttc 6711975  T
Q  98 cacttgctcctt 109  Q
    || ||| |||||    
T  6711976 catttgttcctt 6711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16519136 - 16519290
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| |||| |||||||||||| ||||||| ||||||||  |||||   | || ||||||||||| ||||| || ||  ||||||||||||||    
T  16519136 atacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaatcaacccaccaaagccctcccctcc-aatgtactctatttcttccac 16519234  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | |||||||||||||||  ||||||||||||||| |||||    
T  16519235 ttgctccttccttttttccaaaaccctcccctctcttcccctccaaactcgcaaac 16519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 16625844 - 16625983
Alignment:
Q  14 gttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctt 113  Q
    |||||||||||||||||   |||| ||| ||||  ||||| | | || ||||||||||| |||||||| ||  ||||||||||||||||||||| |||||    
T  16625844 gttcccccaaatgaggg---ttttgtatcatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctatttcttccacttgctccatcctt 16625940  T
Q  114 ttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || | |||||||||||||||| ||||||||||||||| |||||    
T  16625941 ttttccaaaaccctcccctcccttcccctccaaactcgcaaac 16625983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 36030846 - 36030710
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccact 101  Q
    |||||||||||||||||||||||||||| | ||||| |||| |||  ||||| | |||| ||||||||||||| || ||| ||| |||||||||||||||    
T  36030846 tacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaaa-tgaacccccaaagccctctcttctcaaggtcctctatttcttccact 36030748  T
Q  102 tgctccttccttttctgcaaaaccctcccctcctttcc 139  Q
     ||||||||||||| | ||||  |||||||||| ||||    
T  36030747 ggctccttccttttttccaaagtcctcccctcccttcc 36030710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 18182492 - 18182560
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgt 231  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  18182492 gggtagcacttgggtgacattggggtgccaatgtcatgtgacattggccaaccacaatgtcacaagtgt 18182560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 5322166 - 5322298
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||||   |||||| |||| ||||||| ||| |||||||| ||| ||||| | ||||||    
T  5322166 atacagtttttgagttcccccaaatgaggaggattttgtattatga-agaaaaatgaacccccaaagctctcccctcccaatgtcctctatcttttccac 5322264  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    | |||| |||||||| | ||||||| ||||||||    
T  5322265 tagctctttccttttttccaaaaccttcccctcc 5322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11515078 - 11514923
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  ||||||   |||||||||||||||||    
T  11515078 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctatttcttccac 11514979  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || |||||||| ||||||||||||||| |||||    
T  11514978 ttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaac 11514923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15555393 - 15555547
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||  || |||| ||||||||  |||| ||||||| |||||||||||  ||||||   |||||||||||||||||    
T  15555393 atacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaa-attaacccccaaagccctcctctcccattttcttctatttcttccac 15555491  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | ||  | |||||||| || |||||||||||| |||||    
T  15555492 ttgctcattccttttttcctaagtcttcccctccctttccctccaaactcgcaaac 15555547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 18182668 - 18182601
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  18182668 gggtagcacttgggtgacattggggtgccaatgtcatgtgacattggcaaaccacaatgtcacaagtg 18182601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 11522286 - 11522368
Alignment:
Q  74 cctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||| ||| ||||||||||||| || |||||||||||| | |||||||||||||||| ||||||||||||||| |||||    
T  11522286 cctcccaatgtcctctatttcttccatttactccttcctttttttcaaaaccctcccctccattcccctccaaactcgcaaac 11522368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 32761348 - 32761470
Alignment:
Q  27 agggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccc 126  Q
    ||||||||||| ||||||||  ||||| | ||||  ||||||||||| | ||||| ||| ||||||| ||||||||| |||||| |||| | |||| |||    
T  32761348 agggggattttgtattatgaagaaaaa-tgaacccacaaagccctctgcccccaatgtcctctatttattccacttgatccttcattttttacaaagccc 32761446  T
Q  127 tcccctcctttcccctccaaactc 150  Q
    |||||||| |||||||||||||||    
T  32761447 tcccctcccttcccctccaaactc 32761470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1364867 - 1364753
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  ||||||   |||||||||||||||||    
T  1364867 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcttctatttcttccac 1364768  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  1364767 ttgctcattcctttt 1364753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 6656140 - 6656003
Alignment:
Q  13 agttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcct 112  Q
    |||||| |||||||||| || |||| ||||||||  ||||  | | || |||||||||||  ||||||   ||||||||||||||||||||||| |||||    
T  6656140 agttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttcttctatttcttccacttgctcattcct 6656041  T
Q  113 tttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||| | |  | || |||||||| |||||||||||||||    
T  6656040 tttttccttagccttcccctcccttcccctccaaactc 6656003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 43333531 - 43333466
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||||| |||||||||| |||||| |||| ||||||||||||||||| |||||||||| ||||    
T  43333531 aaaaattaatctccaaagccatctccttccaatgtcttctatttcttccaattgctccttcttttt 43333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 39181041 - 39180959
Alignment:
Q  73 tcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| | | ||| |||||||||| |||| |||||||||| |||||    
T  39181041 tcctcccaaagtcctctatttcttccacttactccttcctttt-ttccaaatcctcccctcccttcctctccaaactcgcaaac 39180959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 12941909 - 12942002
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||| ||||||||| ||| |||||||||||||||| |||| | ||||| | | ||||||| || || |||||||||||||||| |||||    
T  12941909 ccaaagccct-tcctcccaatgtcctctatttcttccacttactccgttctttttttccaaacccttccatcatttcccctccaaactcacaaac 12942002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15803222 - 15803109
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||| ||||| || |||| |||| |||  |||||     |||||||||||| ||||| |||| ||| || |||||||||||    
T  15803222 atacaattttttagttcccccaactgaggagggttttatattttgaagaaaaataagccctccaaagccc-ctccttccaatgtcctccatttcttccac 15803124  T
Q  101 ttgctccttcctttt 115  Q
    |||||||||||||||    
T  15803123 ttgctccttcctttt 15803109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21834975 - 21834861
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| |||| |||||||| |||||||| |  |||| ||||||||  ||||| | | |||||||||||||  | |||| | ||| ||| ||||||||||    
T  21834975 atacaactttttagttcccctaaatgaggagagttttatattatgaagaaaaattaatcctccaaagcccttccgtcccgatgtcctctgtttcttccac 21834876  T
Q  101 ttgctccttcctttt 115  Q
    |||||||||||||||    
T  21834875 ttgctccttcctttt 21834861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 532168 - 532229
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    ||||| |||||||| | ||||||||| |||||||| |||||||||||||||||| |||||||    
T  532168 cacttgggtgacatggtggtgccaatgtcatgtgacattggccaaccacaatgtgacaagtg 532229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 1356052 - 1355977
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgat---attggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||||||| |||| |||| |||    ||||||||||||||||||||||||||| ||||| |||||||||    
T  1356052 ggtgacattggggtgtcaatgtcatctgacgacattggccaaccacaatgtcacaagtgtacaaaatgacaaaaaa 1355977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34757639 - 34757484
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  |||   | | || |||||||||||  ||||||   |  |||||||||| |||    
T  34757639 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaggttaaccccccaaagccctcctctcccatttttctctatttctttcac 34757540  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
     ||||| |||||||| | | ||||| |||||||| |||||||||||| || |||||    
T  34757539 ctgctcattccttttttcccaaaccttcccctcccttcccctccaaattcgcaaac 34757484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13767463 - 13767397
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 67  Q
    ||||||||||| |||||||||||||||| || ||||| |||||||| || |||||||| | ||||||    
T  13767463 atacaattttttagttcccccaaatgagtggaattttgtattatgaatataaaattaaaccccaaag 13767397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31082849 - 31082736
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||| ||| |||||||||||| |||| || |||  ||||| ||   |||| |||||| ||||||||||| |||||||   || ||||||||||||||    
T  31082849 atacaatattttagttcccccaaacgaggagggtttagtattacga-agaaaagttaacccccaaagccctcccctcccattttcctctatttcttccac 31082751  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  31082750 ttgctcattcctttt 31082736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43334841 - 43334799
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttatta 43  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  43334841 atacaatttttgagttcccccaaaagagggagattttttatta 43334799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 35812379 - 35812338
Alignment:
Q  3 acaatttttgagttcccccaaatgagggggattttttattat 44  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  35812379 acaatttttgagttcccccaaataagggggattttgtattat 35812338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 36574517 - 36574582
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||| | ||||||||||||| |||||||||  || |||||||||||||||| |||| |||||||    
T  36574517 aaaaataagcctccaaagccctttcctcccaatatcctctatttcttccacttactccgtcctttt 36574582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 26905750 - 26905683
Alignment:
Q  89 tatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||||| ||| |||| | | ||||| ||||||| |||| ||||||||||| |||||    
T  26905750 tatttcttccacttgctcattctttttttcccaaaccttcccctcatttctcctccaaactcacaaac 26905683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 44656848 - 44656923
Alignment:
Q  75 ctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||||| ||| ||||||| |||||||  |||||||||||| |   |||||||||||||||||  |||||||||||    
T  44656848 ctcccaatgtcctctattttttccactaactccttccttttttcacaaaccctcccctcctttttcctccaaactc 44656923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 21626072 - 21626003
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| |||||||| |||||||| | | ||| | |||||||| |||||||||||| || |||||    
T  21626072 tctatttcttctacttgctcattcctttttttccaaatcttcccctccattcccctccaaattcgcaaac 21626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42644691 - 42644646
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga 46  Q
    ||||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  42644691 atacaattttttagttcccccaaattagggggaatttgtattatga 42644646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9087745 - 9087856
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaac-ctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| ||||||| ||||||||| || |||| |||| |||  ||||||||||  |||||||||||  |||| ||||  || |||||||||| ||    
T  9087745 atacaattttt-agttccctcaaatgaggagggttttatattttga--aaaaaattaagtctccaaagccca-tccttccaatatcatctatttctttca 9087840  T
Q  100 cttgctccttcctttt 115  Q
    ||| ||||||||||||    
T  9087841 cttactccttcctttt 9087856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 10413530 - 10413471
Alignment:
Q  177 tgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||||||| ||||| || |||| |||||||||||||||||  |||||||||| |||||||    
T  10413530 tgacattggagtgccgatgtcatatgatattggccaaccac-gtgtcacaagtatgcaaaa 10413471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 18781643 - 18781675
Alignment:
Q  124 ccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||| |||||||||||||||||||||    
T  18781643 ccctcccctcccttcccctccaaactctcaaac 18781675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 30072517 - 30072569
Alignment:
Q  63 caaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||||||| |||||||   || |||||||||||||||||||| ||||||||    
T  30072517 caaagccctcccctcccattttcctctatttcttccacttgctcattcctttt 30072569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 7e-58; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 49860870 - 49860721
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  49860870 atacaattttttagttcccccaaatgagggggatttgttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccaa 49860771  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactc 150  Q
    ||||||||||||||| | ||||||||| ||||| | ||||||||||||||    
T  49860770 ttgctccttccttttttccaaaacccttccctcatctcccctccaaactc 49860721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41962024 - 41962155
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41962024 atacaatttttgagttcccccaaatgagggggattttttatt--gagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 41962121  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  41962122 ttgctccttccttttttccaaaaccctcccctcc 41962155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3043165 - 3043298
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  3043165 atacaatttttgagttcccccaaatcagggggattttttattatgagtaaaaaattaacctccaaaggcctctcctcccaatgtcttctatttcttccac 3043264  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||| ||||||||||    
T  3043265 ttgctccttccttttttccaaaatcctcccctcc 3043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36796457 - 36796324
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||||||||||||||    
T  36796457 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcatagtcctctcctcccaatgtcttctatttcttccac 36796358  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  36796357 ttgctccttccttttttccaaaaccctcccctcc 36796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 49683048 - 49683182
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  49683048 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcctaatgtcttctattttttccac 49683147  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcct 135  Q
    |||||| |||||||| |  ||||||||||||||||    
T  49683148 ttgctcattccttttttctaaaaccctcccctcct 49683182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 24242139 - 24242272
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  24242139 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcccaatatcttctatttcttccac 24242238  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| |  |||| ||||||||||    
T  24242239 ttgctccttccttttttctaaaatcctcccctcc 24242272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 55439618 - 55439485
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  55439618 atacaatttttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcccaatgtcctctatttcttccac 55439519  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||| |||||||| | ||||||||||||||||    
T  55439518 ttgctcattccttttttccaaaaccctcccctcc 55439485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30131933 - 30132087
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30131933 atacaatttttgagtttccccagatgagggaaattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 30132032  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | | ||||||||||||||  ||||||||||| || |||||    
T  30132033 ttgctccttcctttt-ttcgaaaccctcccctcccctcccctccaaattcccaaac 30132087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 47789493 - 47789648
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  47789493 atacaatttttgagttcccccagatgaggggatttttttattatgagtaaaagattaacctccaaagctctctcctctcaatgtcttctatttcttccac 47789592  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| |  | ||||||||||||| ||||||||||||||| |||||    
T  47789593 ttgctccttccttttttctacaaccctcccctcccttcccctccaaactcccaaac 47789648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 43237324 - 43237192
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43237324 atacaattgttgagttcccccaaatgagggg-attttttattatgcgtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 43237226  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| |  |||||||||||||||    
T  43237225 ttgctccttccttttttctaaaaccctcccctcc 43237192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 46312468 - 46312601
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46312468 atacaatttttgagttcccccaaatgaggaagatttttcattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccac 46312567  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||  ||||||||||| | ||||||||||||||||    
T  46312568 ttagtccttccttttttccaaaaccctcccctcc 46312601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 33982767 - 33982899
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccact 101  Q
    |||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  33982767 tacaatttttaagttcccccaaatgaggaagattctttattatgagtaaaaaattaacctccaaagtcctctcctcccaatgtcttctatttcttccact 33982866  T
Q  102 tgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||| | ||||||||||||||||    
T  33982867 tgctccttcctttttttcaaaaccctcccctcc 33982899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 45555667 - 45555537
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||    
T  45555667 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctgtcttcccgatgtcttctatttcttccac 45555568  T
Q  101 ttgctccttcc-ttttctgcaaaaccctccc 130  Q
    ||||||||||| |||| | ||||||||||||    
T  45555567 ttgctccttccattttttccaaaaccctccc 45555537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 38515284 - 38515152
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||    
T  38515284 atacaatttttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacc-ccaaagccctctcctcccaatatcttctatttctttcac 38515186  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||   ||||||||||||||||    
T  38515185 ttgctccttcctttttaccaaaaccctcccctcc 38515152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 34306165 - 34306026
Alignment:
Q  17 cccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttc 116  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  34306165 cccctaaatgagggggattttttatcatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcctttt- 34306067  T
Q  117 tgcaaaaccctcccct-cctttcccctccaaactctcaaac 156  Q
    | |||||||||||||| || | ||||||||||||| |||||    
T  34306066 tccaaaaccctcccctcccctccccctccaaactcccaaac 34306026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 17642623 - 17642481
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||    
T  17642623 atacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctcttttcccaatgtcttctatttcttccac 17642525  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctcc 144  Q
    ||||| ||||||||| | ||||||||||||||||  ||||||||    
T  17642524 ttgcttcttccttttttccaaaaccctcccctcccctcccctcc 17642481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 38526187 - 38526037
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  38526187 atacaatttttgagttcccccaaatgagggagattttatattatgagaaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttccac 38526088  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || || ||||||||| | |||||| ||||||     ||||||||||||||||||||    
T  38526087 ttacttcttccttttttccaaaactctcccc-----tcccctccaaactctcaaac 38526037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 47714720 - 47714862
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  47714720 atacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttccac 47714818  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctcc 144  Q
    ||||||||||||||| |   |||| |||||||||  ||||||||    
T  47714819 ttgctccttccttttttctcaaactctcccctcccctcccctcc 47714862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 43007547 - 43007676
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    |||||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43007547 aatttttgagttcccccaaacgaggaggaatttttattataagtaaaaaattaacctccaaagccctctcctcccaatatcttctatttcttccacttgc 43007646  T
Q  105 tccttccttttctgcaaaaccctcccctcc 134  Q
    | ||||||||| | ||||||||||||||||    
T  43007647 tacttccttttttccaaaaccctcccctcc 43007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 39499232 - 39499074
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctat---ttcttc 97  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||    
T  39499232 atacaatttttgagtttccctaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctatatcttcttc 39499133  T
Q  98 cacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||||| |  |||||| | ||||||| |||| ||||||||| |||||    
T  39499132 cacttgctccttcctttttttaaaaacctttccctcctctcccttccaaactcccaaac 39499074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 44412202 - 44412335
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  44412202 atacaatttttgagttccca-aaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgtcttctatttcttccac 44412300  T
Q  101 ttgctccttcct-tttctgcaaaaccctcccctcc 134  Q
    |||||||||||| ||| | ||||||||| ||||||    
T  44412301 ttgctccttcctattttttcaaaacccttccctcc 44412335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23163557 - 23163432
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||    
T  23163557 atacaatttttgagttccctcaaatgagggc-attttttattatgagtaaaaaattaacctccaaagccctctcctcctgatgtcttctatttcttccac 23163459  T
Q  101 ttgctccttccttttctgcaaaaccctc 128  Q
    ||||||||||||||| | ||||||||||    
T  23163458 ttgctccttcctttt-tccaaaaccctc 23163432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31178293 - 31178447
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||     
T  31178293 atacaatttttaagttctcccaaatgagggagattttttattatgagcaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttccat 31178392  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || || |||| |||| | |||||||||||||||| ||  ||||||||||| |||||    
T  31178393 ttacttcttcatttttttcaaaaccctcccctccctt-tcctccaaactcccaaac 31178447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2420704 - 2420544
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctc------ccaacgtcttctatttc 94  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||      |||| || || |||| |    
T  2420704 atacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcatcccaaatccaatgtattttattac 2420606  T
Q  95 ttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||| |||||| |||||    
T  2420605 ttccacttgctccttcctttttttcaaaaccctcccctccattcccctctaaactcccaaac 2420544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 46017260 - 46017107
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||  ||||||||||||| | ||||||||||| |||||| ||||||| |||    
T  46017260 atacaatttttgagttctcccaaataaggaggattttttattatgagtaaaa--ttaacctccaaagtcttctcctcccaatgtcttccatttctttcac 46017163  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||||||| |||| | ||||| ||| ||||||  | |||||||||||| |||||    
T  46017162 ttactccttctttttttccaaaatccttccctccccttccctccaaactcccaaac 46017107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 25428698 - 25428571
Alignment:
Q  5 aatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgc 104  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||| |||  ||||||||||||||||||| |    
T  25428698 aatttttgagttcctc-aaatgagggagattttttattatgagtaaaaa-ttaatctccaaagcgctctcctctcaatatcttctatttcttccacttac 25428601  T
Q  105 tccttccttttctgcaaaaccctcccctcc 134  Q
    | ||| ||||| | ||||||||||||||||    
T  25428600 ttctttcttttttccaaaaccctcccctcc 25428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 32858864 - 32858708
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||   |||||| |||| |||||||| |  |||| ||| ||| ||||||||||||||    
T  32858864 atacaatttttgagttcccccaaatgaggaggattttatattatga-agaaaaatgaacccccaaagcctttccctctcaatgtcatctatttcttccac 32858766  T
Q  101 ttgctccttcc--ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| ||||  |||| | |||| ||||||||| | ||||||||||||||| |||||    
T  32858765 ttgctcattccttttttttccaaacccctccccttccttcccctccaaactcgcaaac 32858708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 47434368 - 47434515
Alignment:
Q  3 acaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccactt 102  Q
    |||||||||||||||||| |||||||  |||||||||||||||| ||||||| |||||||||||| | ||||||  ||| ||||||||||||||||| ||    
T  47434368 acaatttttgagttcccc-aaatgagatggattttttattatgaataaaaaactaacctccaaagtcttctcctttcaatgtcttctatttcttccattt 47434466  T
Q  103 gctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    | || |||||||| | ||||| | |||||     ||||||||||||||||||||    
T  47434467 gttcattccttttttccaaaatcttcccc-----tcccctccaaactctcaaac 47434515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 3537242 - 3537087
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| ||||||||||||||||| || |||| ||||||||  ||||  ||||||||| ||||||||| |||||||   || |||||||||||||    
T  3537242 atacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaag-ttaacctcccaaagccctcccctcccattttcctctatttcttcca 3537144  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| ||| |||||||| |  ||| || |||||||| ||||||||||||||| |||||    
T  3537143 cttactcattccttttttctaaagccttcccctcccttcccctccaaactcgcaaac 3537087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 35283121 - 35282968
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| ||||||||||||||||| || |||| |||| |||  ||||| | | || ||||||| | |||||||||| |   ||||||||||||||    
T  35283121 atacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccccaaagctc-ctcctcccaatgatctctatttcttccac 35283023  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | | |||||||||||| | ||||||||||||||| |||||    
T  35283022 ttgctccttcctttt-taccaaaccctccccttccttcccctccaaactcgcaaac 35282968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 42583364 - 42583451
Alignment:
Q  47 gtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||||| ||||||| |  ||| |||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  42583364 gtaaaaaattaacctccaaaaccctctcatttcaatgtcttctatttcttccacttgctcattccttttttccaaaaccctcccctcc 42583451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 29623270 - 29623115
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| ||||||||| ||| |||||||| || |||| ||||||||  ||||| ||||||  |||||||||| ||||| || ||| ||||||||||||||    
T  29623270 atacaacttttgagtttccc-aaatgaggagggttttgtattatgaagaaaaa-ttaaccatcaaagccctcccctcctaatgtcctctatttcttccac 29623173  T
Q  101 ttgctccttccttttct--gcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| |   |||||||||||||||  |||||||| |||||| |||||    
T  29623172 ttgctccttcctttttttctcaaaaccctcccctctcttcccctctaaactcgcaaac 29623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 53299896 - 53299812
Alignment:
Q  164 ggtagcactttggtgacattgggg-tgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||||||| || |||| ||| |||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  53299896 ggtagcactttggtgacattgggggtgtcaatgtcacgtgacattggccaaccacaatgtcacaagtgtacaaaaagacaaaaaa 53299812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 26960806 - 26960887
Alignment:
Q  166 tagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||| || |||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||| ||||| |||||||||    
T  26960806 tagcatttaggtgacattggggtaccaatatcatgtgacattagccaaccacaatgtcacaagtgtacaaaaagacaaaaaa 26960887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 53620267 - 53620168
Alignment:
Q  57 aacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| |||||||||||  ||| ||| ||| ||||||||| ||||||||||||||||||| | |||| ||||| ||||| ||||||||||||||| |||||    
T  53620267 aacccccaaagccctccgctctcaatgtcctctatttctcccacttgctccttccttttttccaaagccctcacctcccttcccctccaaactcgcaaac 53620168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 26961000 - 26960922
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||| |||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||  |||| |||||||||    
T  26961000 cacttgggtgacattgaggtgtcaatgtcatgtgacattggccaaccacaatgtcacaagtgtagaaaaagacaaaaaa 26960922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 1132972 - 1133128
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatg-agtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||||||| |||||||| |  |||| ||||||| |||  ||||| |||| ||||| || || |||| ||| ||| |||||||| ||||    
T  1132972 atacaatttttgagttccccaaaatgaggagagttttgtattatgaagt--aaaatgaacccccaaaaccttcccctctcaatgtcatctatttcgtcca 1133069  T
Q  100 cttgctccttcc--ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||| ||||  |||| | |||| ||||||||||| ||||||| ||||||| |||||    
T  1133070 cttgctcattccttttttttccaaacccctcccctcccttcccctacaaactcgcaaac 1133128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 3707091 - 3706984
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaac 148  Q
    |||||| |||| |||||||| ||||||| ||| ||| ||||||||||||||||||||||||| |||| | |||| || |||||||| || ||||| ||||    
T  3707091 aaaaatgaacccccaaagccttctcctctcaatgtcatctatttcttccacttgctccttccttttttttcaaacccatcccctccctttccctctaaac 3706992  T
Q  149 tctcaaac 156  Q
    || |||||    
T  3706991 tcgcaaac 3706984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 49183640 - 49183571
Alignment:
Q  87 tctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||||||||||| |||||||| | | ||||| |||||||| ||||||||||||||| |||||    
T  49183640 tctatttcttccacttgctcattccttttttcccaaaccttcccctccattcccctccaaactcacaaac 49183571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 16205706 - 16205766
Alignment:
Q  170 actttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    |||| |||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||    
T  16205706 acttgggtgacattggggtgccaatgtcatgtgacattgatcaaccacaatgtcacaagtg 16205766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48370227 - 48370292
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 67  Q
    |||||||||||||||||||| ||||||| | |||||| |||||||| ||||||||||||||| ||||    
T  48370227 atacaatttttgagttcccc-aaatgagtgagattttatattatgaataaaaaattaacctcaaaag 48370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24588330 - 24588375
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga 46  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  24588330 atacaatttttgagttcctccaaatgagggggattttgtattatga 24588375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50948240 - 50948103
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa-gccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||| |||||| |||| ||||| || |||| ||||||||  ||||  | | |||||||| ||||||  ||||||   ||||||||||||||||    
T  50948240 atacaattttttagttcctccaactgaggagggttttgtattatgaagaaaagttaaccctccaaaagccctcctctcccattttcttctatttcttcca 50948141  T
Q  100 cttgctccttccttttctgcaaaaccctcccctccttt 137  Q
    | ||||| |||||||| | | ||||| |||||||||||    
T  50948140 catgctcattccttttttcctaaaccttcccctccttt 50948103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 40118931 - 40119069
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgt-ct--tctatttcttc 97  Q
    ||||||||||| ||||||||||||||||| || |||| | | ||||  ||||| | | || ||||||||||| |||||||| || ||  |||||||||||    
T  40118931 atacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccccaaagccctcccctcccaatgtactactctatttcttc 40119030  T
Q  98 cacttgctccttcc--ttttctgcaaaaccctcccctcc 134  Q
    ||||  ||||||||  |||| | ||||||||||||||||    
T  40119031 cactcactccttccttttttttccaaaaccctcccctcc 40119069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 54126253 - 54126162
Alignment:
Q  64 aaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||| | |||||| ||  ||||||| ||| ||| | |||||||||| || |||||||||||||||| ||||||||||||||| |||||    
T  54126253 aaagccctcccttcccaatgttctctattttttctact-gttccttcctttactccaaaaccctcccctcccttcccctccaaactcacaaac 54126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 53299701 - 53299764
Alignment:
Q  168 gcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgt 231  Q
    ||||| |||||||||||||||| |||| |||  ||| |||||||||||||||||||||| ||||    
T  53299701 gcactatggtgacattggggtgtcaatgtcacatgacattggccaaccacaatgtcacaggtgt 53299764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 18257796 - 18257874
Alignment:
Q  78 ccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||| ||||||||||||| ||| || || | ||| | |||||| ||||||||||||||||||||||||| |||||    
T  18257796 ccaatgtcctctatttcttccatttgttcatttcctttttccaaaactctcccctcctttcccctccaaactcgcaaac 18257874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 33944687 - 33944800
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||  ||||||   || ||||||||||||||    
T  33944687 atacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcccattttcctctatttcttccac 33944785  T
Q  101 ttgctccttcctttt 115  Q
    || ||  ||||||||    
T  33944786 ttacttattcctttt 33944800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15499346 - 15499500
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||||  | |||| | | | |||||||| || |||  ||| ||  ||||||||||||||    
T  15499346 atacaatttttgagttctcccaaatgaggaagattttgtattatga--agaaaagtgaaccccaaagccttcccctttcaatgtaatctatttcttccac 15499443  T
Q  101 ttgctccttccttttctgcaaaaccct-cccctcctttcccctccaaactctcaaac 156  Q
    |||||| ||| |||| | | ||||||| || |||  ||||| ||||||||| |||||    
T  15499444 ttgctcgttcttttttttccaaaccctaccactctcttcccatccaaactcgcaaac 15499500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 2323205 - 2323162
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaa 219  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  2323205 ggtgacattggggtgc-aatgtcatgtgatattggccaaccacaa 2323162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11040875 - 11040919
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatg 45  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||    
T  11040875 atacaatttttgagttcccccaaataagggagattttgtattatg 11040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 27921951 - 27921841
Alignment:
Q  49 aaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttc---cacttgctccttccttttctgcaaaaccctcccctcctttcccctcca 145  Q
    ||||||| |||| |||||| ||||||||||||| ||| |||| ||||||   ||||| ||| |||||||| | | ||||| ||  |||| ||||||||||    
T  27921951 aaaaaataaacccccaaagtcctctcctcccaatgtcctctacttcttcttccacttactctttcctttttttccaaaccgtcgtctcccttcccctcca 27921852  T
Q  146 aactctcaaac 156  Q
    ||||| |||||    
T  27921851 aactcgcaaac 27921841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 39478134 - 39478006
Alignment:
Q  8 ttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaac-gtcttctatttcttccacttgctc 106  Q
    ||||||||||||| |||| | ||||||||| |||||| |  |||||   ||||||||||||||||  ||| |||  ||| ||||||| |||||||| |||    
T  39478134 ttttgagttccccaaaattatggggattttgtattataaagaaaaataaaacctccaaagccctcgtctctcaaaagtcctctattttttccacttcctc 39478035  T
Q  107 cttccttttctgcaaaaccctcccctcct 135  Q
    | ||||||| | | || ||||||||||||    
T  39478034 cctccttttttcccaagccctcccctcct 39478006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 49860574 - 49860703
Alignment:
Q  18 ccccaaatgagggggattttttattatgagtaaaaaattaacctccaa-agccctctcctcccaacgtcttctatttcttccacttgctccttccttttc 116  Q
    |||||||||||| | ||||| ||||||||  ||||||| |||| |||| ||||||||||||||||  || ||| ||||||  ||||| || |||||| |     
T  49860574 ccccaaatgaggagaattttgtattatga--aaaaaatgaacccccaacagccctctcctcccaatatcctctgtttcttttacttggtcattccttatt 49860671  T
Q  117 tgcaaaaccctcccctcctttcccctccaaac 148  Q
    |  ||| ||||||||||| |||||||| ||||    
T  49860672 tcgaaagccctcccctccattcccctctaaac 49860703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 22616703 - 22616632
Alignment:
Q  160 aaggggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgt 231  Q
    |||||||||||||| ||||||| || |||  |||| |||||||| ||||  |||||||||||||| ||||||    
T  22616703 aaggggtagcacttgggtgacactgaggtatcaatgtcatgtgacattgatcaaccacaatgtcagaagtgt 22616632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 25390267 - 25390220
Alignment:
Q  200 gtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||  |||||||||||||||||||| |||||| ||||||||    
T  25390267 gtgatattggataaccacaatgtcacaagtgtacaaaagaacaaaaaa 25390220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 48342347 - 48342300
Alignment:
Q  200 gtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||||||||||| ||| |||||  ||||||||    
T  48342347 gtgatattggccaaccacaatgtcacaaatgtacaaaaaaacaaaaaa 48342300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 52620951 - 52621017
Alignment:
Q  90 atttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||| ||||||| |||||||||||| | ||||||||  |||||  ||||||||||||||| |||||    
T  52620951 atttcctccacttactccttccttttttccaaaacccatccctctcttcccctccaaactcgcaaac 52621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 30675069 - 30675000
Alignment:
Q  161 aggggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtg 230  Q
    |||| ||||||||  |||| |||| |||| |||| |||||||| ||| |||||||||||||| |||||||    
T  30675069 agggatagcacttgtgtgaaattgtggtgtcaatgtcatgtgacattagccaaccacaatgtgacaagtg 30675000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 30995856 - 30995791
Alignment:
Q  50 aaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||||||||||| || ||||   |||||||  |||||||||||||||| ||| |||||||||||    
T  30995856 aaaaattaacctcccaaacccttctctcccaatatcttctatttcttccatttgttccttcctttt 30995791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 39115065 - 39115161
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcc--ttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||||||||  ||||| | ||| ||||||||||||||  |||||||||  |||||  |||| || |||||||| || |||||||||||| |||||    
T  39115065 ccaaagccctcctctcccgaagtcctctatttcttccacgcgctccttccttttttccccaaagccatcccctccctttccctccaaactcacaaac 39115161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44979453 - 44979408
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga 46  Q
    ||||||||||| ||||||||||||| ||||||||||  ||||||||    
T  44979453 atacaattttttagttcccccaaattagggggatttaatattatga 44979408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41677504 - 41677540
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttt 37  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  41677504 atacattttttgagttcccccaaattagggggatttt 41677540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 29241880 - 29242013
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||     
T  29241880 atacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattatcctccaaagccctctcctcccaatgtcttctatttcttccat 29241979  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  29241980 ttgctccttccttttttccaaaaccctcccctcc 29242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 24734908 - 24734766
Alignment:
Q  9 tttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctcct 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  24734908 tttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctcgt 24734809  T
Q  109 tccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||| | ||||||||||||     ||||||||||||||| |||||    
T  24734808 tccttttttccaaaaccctccc-----ttcccctccaaactcccaaac 24734766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26574442 - 26574592
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| |||| ||||||||||||||||||    
T  26574442 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcaaagtcatctccttccaatgtcttctatttcttccac 26574541  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||| | |||||||||||||     ||||||||||||||||||||    
T  26574542 ttgctccttccttttttccaaaaccctcccc-----tcccctccaaactctcaaac 26574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 5825366 - 5825234
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||    
T  5825366 atacaaattttgagttcccc-aaatgagggggattttttattatcagtaaaaaattaaccttcaaagccttctcctcccaatgtcttctatttctttcac 5825268  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||||||| | ||||||||||||||||    
T  5825267 ttgctccttccttttttccaaaaccctcccctcc 5825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31345417 - 31345572
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||    
T  31345417 atacaatttttgagttcccccacatgaaggggatttttaattatgagtaaaaaattaacatctaaagtcctctcctcccaacgtcttctattttttccac 31345516  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    | || |||||||||| | ||||| |||||||||   |||||||||||||| |||||    
T  31345517 tcgcaccttcctttttttcaaaaacctcccctcacctcccctccaaactcccaaac 31345572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1029327 - 1029198
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| | |||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  1029327 atacaattttttacttcccccaaatgagagaaattttttattatgagtaaaaaattatcctccaaagccctctccttccaatgtcttctatttcttccac 1029228  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    ||||||||||||||| | ||||||||||||    
T  1029227 ttgctccttccttttttccaaaaccctccc 1029198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26481178 - 26481329
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||      |||| |||||||||||||||||    
T  26481178 atacaatttttgagctcccctaaatgagggggatttttttattatgagtaaaaaattaacctccaaagccctt-----ccaatgtcttctatttcttcca 26481272  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| ||||||||| | ||||||||||||||||  |||||||||||||| |||||    
T  26481273 cttgctacttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaac 26481329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4909962 - 4910094
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||    
T  4909962 atacaatttttaagttcctccaaatgagagagattttttattatgagtaaaaaattaacctccaaagctctcccctcccaatgtcttctgtttcttccac 4910061  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcc 134  Q
    ||||||||||| | | | ||||||||||||||||    
T  4910062 ttgctccttccatct-ttcaaaaccctcccctcc 4910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34914660 - 34914506
Alignment:
Q  1 atacaatttttgagtt-cccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |||| | || ||||||||||||    
T  34914660 atacaatttttgagtttcccccaaatgagag--attttttattatgagtaaaaaattaacctccaaagccctctccttccaatgcctactatttcttcca 34914563  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||| || || |||||| | |||||||||||||| |  ||||||| |||||| |||||    
T  34914562 cttacttctcccttttttccaaaaccctccccttccctcccctcaaaactcccaaac 34914506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23095175 - 23095253
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 79  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23095175 atacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctccc 23095253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 14276018 - 14275906
Alignment:
Q  2 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccact 101  Q
    ||||||||||  |||| | ||||||||| | ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  14276018 tacaattttttcgttcgctcaaatgaggag-attttttattatgagtaaaaaattaaccttcatagccctctcctcccaatgtcttctatttcttccact 14275920  T
Q  102 tgctccttcctttt 115  Q
    ||||| ||||||||    
T  14275919 tgctcattcctttt 14275906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26713897 - 26713742
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttt-ttattatgagtaaaaaattaacctc-caaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||||  ||||| |||||| | |||||||||| |||||||| ||  ||||||||||||    
T  26713897 atacaatttttgagttcccc-aaatgaggaggattttcttatcatgaagaaaaa-ttaacccctcaaagccctcccctcccaatgtactctatttcttcc 26713800  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    ||||||||||||||||  | |||||||||||||||| ||||||||||||||| |||||    
T  26713799 acttgctccttcctttattccaaaaccctcccctcccttcccctccaaactcgcaaac 26713742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 2365721 - 2365799
Alignment:
Q  78 ccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||| |||||    
T  2365721 ccaatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaac 2365799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 15057184 - 15057099
Alignment:
Q  162 ggggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||| |||||||||| ||||| ||| |||||    
T  15057184 ggggtagcactttggtgacattggggtgtcaatgtcatgtgacattggccaaccaaaatatcacaagtgtacaaaatgaccaaaaa 15057099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1567315 - 1567160
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  | | || ||||||| |||  ||||||   |||||||||||||||||    
T  1567315 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctatttcttccac 1567216  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||||| |||||||| | | || || |||||||| ||||||||||||||| |||||    
T  1567215 ttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaac 1567160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 28606633 - 28606555
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||  |||||| ||||| |||||||||    
T  28606633 cacttgggtgacattggggtgccaatgtcatgtgacattggccaaccacaatgtcttaagtgtacaaaaagacaaaaaa 28606555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 7837652 - 7837729
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaa 246  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||| |||||||| ||||| ||||||||    
T  7837652 cacttgggtgacattgaagtgccaatgtcatgtgatattggccaactacaatgttacaagtgtacaaaaagacaaaaa 7837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 28606449 - 28606519
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    |||||||||||||||||||| | ||||||   ||||||||||||||||||||||||| ||||| |||||||||    
T  28606449 ggtgacattggggtgccaatgttatgtgac--tggccaaccacaatgtcacaagtgtacaaaaagacaaaaaa 28606519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 7840994 - 7841065
Alignment:
Q  175 ggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaa 246  Q
    |||||||||| ||||||||| ||||||||||||||||||  ||||||| ||||||||  |||| ||||||||    
T  7840994 ggtgacattgaggtgccaatgtcatgtgatattggccaattacaatgttacaagtgtataaaatgacaaaaa 7841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32719423 - 32719577
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||   |||| |||||| |||||||||||   |||||   || ||||||||||||||    
T  32719423 atacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctttcccattttcctctatttcttccac 32719521  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    || ||  |||||||| | |  | || |||||||| ||||||||||||||| |||||    
T  32719522 ttacttattccttttttccctagccttcccctcccttcccctccaaactcgcaaac 32719577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 15615640 - 15615594
Alignment:
Q  62 ccaaagccctctcctcccaacgtcttctatttcttccacttgctcct 108  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||||    
T  15615640 ccaaaaccctctcctcccaatgtcttctatttctttcacttgctcct 15615594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13380575 - 13380467
Alignment:
Q  1 atacaatttttgagttc-ccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    ||||||||||||||||| ||||||||||||  |||||| ||||||||   |||||| |||  |||||||| || ||||  ||| || ||||| |||||||    
T  13380575 atacaatttttgagttccccccaaatgaggatgattttatattatga-agaaaaatgaactcccaaagccttcccctcttaacatcatctatctcttcca 13380477  T
Q  100 cttgctcctt 109  Q
    ||||||||||    
T  13380476 cttgctcctt 13380467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 198
Target Start/End: Original strand, 14292088 - 14292123
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttca 198  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14292088 gggtagcacttgggtgacattggggtgccaatttca 14292123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 2576741 - 2576790
Alignment:
Q  10 ttgagttcccccaaatgagggggattttttattatgagtaaaaaattaac 59  Q
    ||||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  2576741 ttgagttcctccaaacgaaggggattttgtattatgaataaaaaattaac 2576790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 7841172 - 7841104
Alignment:
Q  169 cactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaa 237  Q
    ||||| || |||||||||||| |||| | |||||| ||| | |||||||||||||||| |||| |||||    
T  7841172 cacttgggcgacattggggtgtcaatgttatgtgacatttgtcaaccacaatgtcacatgtgtacaaaa 7841104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 16193756 - 16193788
Alignment:
Q  199 tgtgatattggccaaccacaatgtcacaagtgt 231  Q
    ||||||||||||||| |||||||||||||||||    
T  16193756 tgtgatattggccaatcacaatgtcacaagtgt 16193788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 23095253 - 23095293
Alignment:
Q  94 cttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||||||| | ||||| ||||||||||    
T  23095253 cttccacttgctccttccttttttccaaaatcctcccctcc 23095293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 25070225 - 25070157
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgt 231  Q
    ||||||||||| | | |||||||| || |||| |||||||||||||| |||| ||||| ||| ||||||    
T  25070225 gggtagcacttggctaacattgggatgtcaatgtcatgtgatattggtcaacgacaatatcataagtgt 25070157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 28551994 - 28552046
Alignment:
Q  63 caaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    ||||||| || |||||||   ||||||||||||||||||||||| ||||||||    
T  28551994 caaagccatcccctcccattttcttctatttcttccacttgctcattcctttt 28552046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 35502 - 35633
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||| |||    
T  35502 atacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctccaaagctctctcttcccaatgtcttctatttctttcac 35600  T
Q  101 ttgctccttccttttctgcaaaaccctcccctc 133  Q
    ||||||||||||||| | |||||||||||||||    
T  35601 ttgctccttccttttttccaaaaccctcccctc 35633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3718 - 3852
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggatttt-ttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||| | |||||| || |||||||||||||||||    
T  3718 atacaatttttgagttcccccaaatatgggggatttttttattatgagtaaaaaattatcctccaaagccttatcctccaaatgtcttctatttcttcca 3817  T
Q  100 cttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||| | ||||||||||||||||    
T  3818 cttgctccttccttttttccaaaaccctcccctcc 3852  T

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Target: scaffold1562 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 174 - 29
Alignment:
Q  1 atacaatttttgagttcccccaaa-tgagggggatttttt-attatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||    
T  174 atacaatttttgagttcccccaaaatgaggggtttttttttattatgagtaaaaaattaacctccaaagccttcttctcccaatgttttctatttcttcc 75  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctcc 144  Q
    |||||||||||| |||| |  ||||||||||| |||  ||||||||    
T  74 acttgctccttctttttttctaaaaccctcccttcccctcccctcc 29  T

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Target: scaffold1562; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 359 - 396
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  359 caaagccctcccctcccttcccctccaaactctcaaac 396  T

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Target: scaffold1158 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2419 - 2564
Alignment:
Q  1 atacaatttttgagttcccccaaa-tgagggggatttt-ttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttcc 98  Q
    |||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||    
T  2419 atacaatttttgagttcccccaaaatgaggggtttttttttattatgagtaaaaaattaacctccaaagccttcttctcccaatgttttctatttcttcc 2518  T
Q  99 acttgctccttccttttctgcaaaaccctcccctcctttcccctcc 144  Q
    |||||||||||| |||| |  ||||||||||| |||  ||||||||    
T  2519 acttgctccttctttttttctaaaaccctcccttcccctcccctcc 2564  T

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Target: scaffold1158; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 2234 - 2197
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  2234 caaagccctcccctcccttcccctccaaactctcaaac 2197  T

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Target: scaffold0636 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 8435 - 8306
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||| | ||||||| |||  |||||||||||||||||    
T  8435 atacaatttttgaattcccccaaatgagtggaattttttattatgagtaaaaaattaacatccaaagtcatctcctctcaatatcttctatttcttccac 8336  T
Q  101 ttgctccttccttttctgcaaaaccctccc 130  Q
    ||  | ||||||||| |  |||||||||||    
T  8335 ttatttcttccttttttctaaaaccctccc 8306  T

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Target: scaffold0136 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 2070 - 2217
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||||| || |||| ||||||||  ||||  |||||| |||||||||||  ||||||   |||||||||||||||||    
T  2070 atacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcccattttcttctatttcttccac 2168  T
Q  101 ttgctccttccttttctgcaaaaccctcccctcctttcccctccaaact 149  Q
    |||||| |||||||| |   || || |||||||| ||||||||||||||    
T  2169 ttgctcattccttttttcttaagccttcccctcccttcccctccaaact 2217  T

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Target: scaffold0036 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 82830 - 82675
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctcc-aaagccctctcctcccaacgtcttctatttcttcca 99  Q
    |||||||||| |||||||| ||||| ||| ||||||| ||||||||  ||||| | |||| || |||||||| | ||| ||| ||| |||||||||||||    
T  82830 atacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaa-taaacccccgaaagcccttttctctcaaagtcatctatttcttcca 82732  T
Q  100 cttgctccttcc-ttttctgcaaaaccctcccctcctttcccctccaaactctcaaa 155  Q
    |||||||||||| |||| | |||| ||||||||||| || |||||||||||| ||||    
T  82731 cttgctccttcctttttttccaaagccctcccctcccttaccctccaaactcacaaa 82675  T

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Target: scaffold0013 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 107761 - 107858
Alignment:
Q  36 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcc 134  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||  |||||||||||||| |||| |||||||||||| | | ||||||||||||||    
T  107761 ttttattatgagtaaaaaattaacctccaaaattctctcttcccaatatcttctatttcttcaacttactccttcctttt-ttccaaaccctcccctcc 107858  T

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Target: scaffold0717 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1612 - 1548
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 66  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1612 atacaatttttgagttcctccatatgagggggattttt-attatgagtaaaaaattaacctccaaa 1548  T

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Target: scaffold0717; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 1798 - 1835
Alignment:
Q  119 caaaaccctcccctcctttcccctccaaactctcaaac 156  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  1798 caaagccctcccctcccttcccctccaaactctcaaac 1835  T

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Target: scaffold1163 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 2041 - 1937
Alignment:
Q  52 aaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttccttttctgcaaaaccctcccctcctttcccctccaaactct 151  Q
    |||| |||| ||||||||||| |||||||   |||||||||||||||||||||||||||||||| | ||||  | |||| ||| |||||||||||||||     
T  2041 aaatcaacccccaaagccctcccctcccattttcttctatttcttccacttgctccttcctttttttcaaagtcttcccttcccttcccctccaaactcg 1942  T
Q  152 caaac 156  Q
    |||||    
T  1941 caaac 1937  T

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Target: scaffold0059 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 67896 - 67817
Alignment:
Q  36 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||||||||||||||||||||||||||||  |||||| || |||  |||||||||||||| |||| ||||||||||||    
T  67896 ttttattatgagtaaaaaattaacctccaaaatcctctcttcacaatatcttctatttcttcaacttactccttcctttt 67817  T

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Target: scaffold0059; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 76001 - 75922
Alignment:
Q  36 ttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccacttgctccttcctttt 115  Q
    |||||||||||||||||||||||||||||||   ||||| || |||  |||||||||||||| |||| ||||||||||||    
T  76001 ttttattatgagtaaaaaattaacctccaaaattctctcttctcaatatcttctatttcttcaacttactccttcctttt 75922  T

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Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 1825 - 1742
Alignment:
Q  163 gggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||||||||||| || | || |||| |||||||| |||||| |||||| |||||| ||||||||||||| ||||||||    
T  1825 gggtagcactttggtgacaatgagatgtcaatgtcatgtga-attggctaaccacgatgtcataagtgtgcaaaagaacaaaaaa 1742  T

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Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 1629 - 1712
Alignment:
Q  164 ggtagcactttggtgacattggggtgccaatttcatgtgatattggccaaccacaatgtcacaagtgtgcaaaaggacaaaaaa 247  Q
    ||||||||||||| ||| |||||||| |||| |||||||| |||||||| |||||| || |||| | || |||| |||||||||    
T  1629 ggtagcactttggcgacgttggggtgtcaatgtcatgtgacattggccatccacaaagttacaaatatgtaaaaagacaaaaaa 1712  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29278 - 29165
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||||| | || |||| ||||||||  ||||  ||||||  |||||||||   ||||||   |||||||||||||||||    
T  29278 atacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaag-ttaaccctcaaagcccttctctcccattttcttctatttcttccac 29180  T
Q  101 ttgctccttcctttt 115  Q
    |||||| ||||||||    
T  29179 ttgctcattcctttt 29165  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 74737 - 74782
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatga 46  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||||||||    
T  74737 atacaatttttcagttccctcaaattagggggattttgtattatga 74782  T

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Target: scaffold0248 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 243 - 346
Alignment:
Q  1 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaacgtcttctatttcttccac 100  Q
    ||||||||||| |||||| |||||| ||| || |||| ||||||||   |||| |||||| ||||||| |||  ||||||   || ||||||||||||||    
T  243 atacaattttttagttcctccaaataaggagggttttgtattatga-agaaaagttaacccccaaagctctcctctcccattttcctctatttcttccac 341  T
Q  101 ttgct 105  Q
    |||||    
T  342 ttgct 346  T

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