View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15748_low_11 (Length: 363)
Name: NF15748_low_11
Description: NF15748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15748_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 45000015 - 44999751
Alignment:
| Q |
1 |
ttttgcagctaaagtagaagaaggaagagaaggcaaaaatggcaagctatctgtaggtccagtatatcgcaaccttctagctaaagatcaatttccacca |
100 |
Q |
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| T |
45000015 |
ttttgcagctaaagtagaagaaggaagagaaggcaaaaatggcaagctatctgtaggtccagtatatcgcaaccttctagctaaagatcaatttccacca |
44999916 |
T |
|
| Q |
101 |
tctgatcctgatttaactacagcttgggatattttcaggtatatgatatttttcatgcnnnnnnngttggttttaaattgagttacgacgttgttgacca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
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| T |
44999915 |
tctgatcctgatttaactacagcttgggatattttcaggtatatg-ta-----------aaaaaagttggttttaaattgagttacgacgttgttgacca |
44999828 |
T |
|
| Q |
201 |
caatttaaaactatgcttagaatatactataaattgatcaaagagtaatgataattaactttcctaatgagcttcct |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44999827 |
caatttaaaactatgcttagaatatactataaattgatcaaagagtaatgataattaactttcctaatgagcttcct |
44999751 |
T |
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