View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1574_high_21 (Length: 236)
Name: NF1574_high_21
Description: NF1574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1574_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 44199113 - 44199330
Alignment:
| Q |
1 |
ctagtagtattgttcccgttattgatctcaatgacccaaatgcttcaaagttaataggacatgcatgcaaaacatggggtgtgtatcaagtggtgaacca |
100 |
Q |
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| T |
44199113 |
ctagtagtattgttcccgttattgatctcaatgacccaaatgcttcaaagttaataggacatgcatgcaaaacatggggtgtgtatcaagtggtgaacca |
44199212 |
T |
|
| Q |
101 |
tggcatcccaataagcctccttgatgaaattcaatggcttggacaaactctcttcacccttccctctcaccaaaaactcaaagccattcgttccccagat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44199213 |
tggcatcccaataagcctccttgatgaaattcaatggcttggacaaactctcttcacccttccctctcaccaaaaactcaaagccattcgttccccagat |
44199312 |
T |
|
| Q |
201 |
ggtgtttcgggctatggc |
218 |
Q |
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|||||||||||||||||| |
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| T |
44199313 |
ggtgtttcgggctatggc |
44199330 |
T |
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