View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15750_high_3 (Length: 235)
Name: NF15750_high_3
Description: NF15750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15750_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 45369874 - 45369672
Alignment:
| Q |
15 |
cagagatcaacatgatagagttagatttatcacgaaaaatgatattccatataaaatcattcttaatatccacatgtgaagagacagagcttaagatgca |
114 |
Q |
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| T |
45369874 |
cagagatcaacatgatagagttagatttatcaagaaaaatgatattccatataaaatcattattaatatccacaggtgaagagacagagcttaagatgca |
45369775 |
T |
|
| Q |
115 |
attggatcttaatgtagctgagcttagatttagatctattattaaattaaattaagattatgattgggatgaattaagaaatgtgaaagatgacctcagg |
214 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45369774 |
attggatcttaatgtagctgagattagatttagatctattattaaattaaattaagattatgattgggatgaattaagaaatgtgaaagatgacctcagg |
45369675 |
T |
|
| Q |
215 |
tct |
217 |
Q |
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||| |
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| T |
45369674 |
tct |
45369672 |
T |
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