View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15753_high_7 (Length: 388)
Name: NF15753_high_7
Description: NF15753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15753_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 47368263 - 47368615
Alignment:
| Q |
20 |
tctgatactgattttagtgatgaatcataccattggagatgatcgtcgaaacttgctggcatgttgaacttgtccatgtgaattatgtatgtccttttaa |
119 |
Q |
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| T |
47368263 |
tctgatactgattttagtgatgaatcataccattggagatgatcgtcgaaacttgctggcatgttgaacttgtccatgtgaattatgtatgtccttttaa |
47368362 |
T |
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| Q |
120 |
gatgctgtgttttcttttctgctacggtgaatctgctagacaaaactagcagcaaagccatctgaagacacttgaaaatcagcatattcatcttttagct |
219 |
Q |
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| T |
47368363 |
gatgttgtgttttcttttctgctatggtgaatctgctagacaaaactagcagcaaagccatctgaagacacttgaaaatcagcatgttcatcttttagct |
47368462 |
T |
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| Q |
220 |
ccagtatgagagttgtagttttggcttctttttgaatttgctttagaattgcagggatagctggtatttattattggtttggaactattgagtctgtgga |
319 |
Q |
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| T |
47368463 |
ccagtatgagagttgtagttttggcttctttttgaatttgctttagaattgcagggatagctggtatttattattggtttggaactattgagtctgtgga |
47368562 |
T |
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| Q |
320 |
gattggtagattcttttataaccaatacatatttcaattgggaacagagaata |
372 |
Q |
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| T |
47368563 |
gattggtagattcttttataaccaatacatatttcaattgggaacagagaata |
47368615 |
T |
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