View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15753_high_8 (Length: 327)
Name: NF15753_high_8
Description: NF15753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15753_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 46892387 - 46892706
Alignment:
| Q |
1 |
ttcaaccgtcccagtcatgtgttatctatggcttaattcttctcaatcactcttccctattgcacttcttaccaactcatccgtccacgtcatcatgtac |
100 |
Q |
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| T |
46892387 |
ttcaaccgtcccagtcatgtgttatctatggcttaattcttctcaatcactcttccctattgcacttcttaccaactcatccgtccacgtcatcatgtac |
46892486 |
T |
|
| Q |
101 |
tcttactacttcctcaccaccgttggtatccgaccgccttggaaacgcgtcgttaccgactgccagattgttcagttcgtgttcagcttcgccgtctccg |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46892487 |
tcttactacttcctcaccaccgttggaatccgaccgccttggaaacgcgtcgttaccgactgccagattgttcagttcgtgttcagcttcgccgtctccg |
46892586 |
T |
|
| Q |
201 |
gtctcatgctttattatcacttcggatccgatggtggtggatgctctgggatgaaggcttggtgtttcaatgctgtttttaatgcttctcttttggctct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46892587 |
gtctcatgctttattatcacttcggatccgatggtggtggatgctgtgggatgaaggcttggtgtttcaatgctgtttttaatgcttctcttttggctct |
46892686 |
T |
|
| Q |
301 |
ttttcttgattttcatctca |
320 |
Q |
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|||||||||||||||||||| |
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| T |
46892687 |
ttttcttgattttcatctca |
46892706 |
T |
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