View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15753_low_15 (Length: 247)
Name: NF15753_low_15
Description: NF15753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15753_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 6358219 - 6358000
Alignment:
| Q |
18 |
ttgccattgtaatatttaagtgtacaatattagtcatatgtacatacatcagcagcttaattttttatttggctggtgtgtggtaatattaactatcttc |
117 |
Q |
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| T |
6358219 |
ttgccattgtaatatttaagtgtacaatattagtcatatgtgcatacatcagcagcttaattttttatttggctggtgtgtggtaatattaactatcttc |
6358120 |
T |
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| Q |
118 |
caactaaatatgttctgcaacgtcgaggtgttaagatttctgttggaattgcaatatacatgttccaacaatttcttctaccttccgttatgtgttggtg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6358119 |
caactaaatatgttctgcaacgtcgaggtgttaagatttctgttggaattgcaatatacatgttccaacaatttcttctaccttccgttatgtgttggtg |
6358020 |
T |
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| Q |
218 |
acatcgaaactaatattcat |
237 |
Q |
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|||||||||||||||||||| |
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| T |
6358019 |
acatcgaaactaatattcat |
6358000 |
T |
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