View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15756_high_12 (Length: 275)
Name: NF15756_high_12
Description: NF15756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15756_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 51805723 - 51805981
Alignment:
| Q |
1 |
ttgaccatgcaacatgcatgttgataaaatcatggatttaagacttttcaatcttacaaagctttttggtaattcccaaagattgagtttactgttttcg |
100 |
Q |
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| T |
51805723 |
ttgaccatgcaacatgcatgttgataaaatcatggatttaagacttctcaatcttacaaagctttttggtaattcccaaagattgagtttactgttttcg |
51805822 |
T |
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| Q |
101 |
ttgaagttgagaatttcaagattggtgaggttgaaaacagacatgggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatatttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51805823 |
ttgaagttgagaatttcaagattggtgaggttgaaaacagacatgggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatatttta |
51805922 |
T |
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| Q |
201 |
aagacgagaaatcaggaagtgttcctgacaggtgcatcttgttcatgttgagttgttct |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
51805923 |
aagacgagaaatcaggaagtgttcctgacaggtgcatcttgttcatgttgagtagttct |
51805981 |
T |
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