View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15756_high_6 (Length: 342)
Name: NF15756_high_6
Description: NF15756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15756_high_6 |
 | |
|
| [»] chr7 (22 HSPs) |
| |
|
| [»] chr4 (2 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] chr2 (6 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-172; HSPs: 22)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 29577849 - 29578173
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577849 |
cttgtgagagggcaaagagggcactttcatatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
29577948 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577949 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtatggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
29578048 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
29578049 |
gaaattgtccttgttggaggttcatctagaattcccaaagtgcggaaactattgcaagactttttcaagggtagggatttgtgcatgagcataaaccctg |
29578148 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
29578149 |
acgaggctgttgcttatggtgcagc |
29578173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 29582018 - 29582342
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||||| || ||||| |||||||| ||||||||| || ||||||| |
|
|
| T |
29582018 |
cttgtgagagggcaaagaggacactttcatttgacattgagaccacaattgacgtagatgccatttgtcaaggtattgatttctgctcaccagttactcg |
29582117 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||| || ||||||| | ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| | |||||| ||| || |
|
|
| T |
29582118 |
ggccaagtttgagcaaatcaacatcgacctctttgaaaaatgtatggagattgttgggagttgtctacgtgatgctaacatggtcaagagtagtgtagat |
29582217 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| || |||||| |||| || || ||||||||||||||| ||| | ||||||||||| ||||||||||| | |||||||||||||||||| ||||| | |
|
|
| T |
29582218 |
gatatcgtccttattggtggctcttctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgcatgagcatcaaccctg |
29582317 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
| ||||||||||||||||||||||| |
|
|
| T |
29582318 |
atgaggctgttgcttatggtgcagc |
29582342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 339
Target Start/End: Complemental strand, 8609908 - 8609587
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||| |||||||||||||| || |||||||||| | |||||||||| || || |||||||| ||||| |
|
|
| T |
8609908 |
cttgtgagagggcaaagaggacactttcatttgacacggaggccacaattgatattgatgctatatctgagggtattgatttttgttcatcaatcactcg |
8609809 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||||| ||||||| ||| |||||||||||||||||||| |||| ||||| ||| || ||||| ||||||| | ||||| ||| | ||| || |
|
|
| T |
8609808 |
tgcgaagtttgagcaacttaacatggacctctttgaaaagtgtatggagacggttgaaagatgtcttactgatgctgaaatggataagaaaaccgtagat |
8609709 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| |||| |||||||||||||| ||||| ||||| ||| || | | ||| |||||||||||||||| || | ||||||||| |||||||| ||||| | |
|
|
| T |
8609708 |
gatgttgttcttgttggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatggaaaggatttgtgtatgagcatcaaccctg |
8609609 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgc |
339 |
Q |
| |
|
| ||||| |||||||||||||| |
|
|
| T |
8609608 |
atgaggcggttgcttatggtgc |
8609587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 8538022 - 8537884
Alignment:
| Q |
23 |
gagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcga |
122 |
Q |
| |
|
||||||||||| ||| | ||||| || |||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||| |||||||| |||||||| | |
|
|
| T |
8538022 |
gagagggcaaaaaggtcgctttcttacgacactgaagccacaattgatatagatgctatatgtcagggtgttgatttctgttcatcaatcactcgggcca |
8537923 |
T |
|
| Q |
123 |
aatttgagcgactcaacatggacctctttgaaaaatgta |
161 |
Q |
| |
|
| ||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
8537922 |
agtttgagcaactcaacatggacctctttgaaaagtgta |
8537884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 342
Target Start/End: Complemental strand, 8545622 - 8545300
Alignment:
| Q |
20 |
tgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcggg |
119 |
Q |
| |
|
||||||| |||||| ||| ||||||| || |||| |||||||||||||||| |||||||| ||| ||| ||||||||||| || |||| || ||||||| |
|
|
| T |
8545622 |
tgtgagaaggcaaaaaggacactttcatacgacactgaggccacaattgacctagatgctttatatcaaggtattgacttttgttcatgcatcactcggg |
8545523 |
T |
|
| Q |
120 |
cgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatga |
219 |
Q |
| |
|
| || ||||||| | | || ||||||||||||||||| |||| ||| | |||| ||||||| ||||||| | |||||| || ||| ||| |||| |
|
|
| T |
8545522 |
ccaagtttgagcaattgaatatggacctctttgaaaagtgtatggacactgttaattgttgtcttgttgatgctaagatggacaagggtagtgtagatga |
8545423 |
T |
|
| Q |
220 |
aattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgac |
319 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| ||| || | | ||||| || || ||||| ||||| | ||| || |||| |||||| ||||| || |
|
|
| T |
8545422 |
tgttgtccttgttggcggttcttctaggattcctaaagtgagacagctattacaggagttttttaaggggaaggaattatgcaagagcattaaccctgat |
8545323 |
T |
|
| Q |
320 |
gaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
8545322 |
gaggctgttgcttatggtgcagc |
8545300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 342
Target Start/End: Complemental strand, 8570302 - 8569978
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
|||||||||||||||| ||| ||||||| ||||| | ||||||||||||||| |||||||||||| | |||| ||||||||| | |||||||| || || |
|
|
| T |
8570302 |
cttgtgagagggcaaaaaggacactttcatatgatactgaggccacaattgagctagatgctatatataagggaattgacttcagttcatcaataacccg |
8570203 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||| || |||||| | | || ||| ||||||||||||| |||| ||| | |||| |||||||| ||||||| | ||||| ||| || ||| || |
|
|
| T |
8570202 |
ggccaagtttgaggaaatgaatatgaacctctttgaaaagtgtatggaaactgttaatagttgtcttgctgatgctaagatggaaaagaatagtgtagat |
8570103 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| ||||||||||||| ||||| ||||| ||||| ||| || || | ||||| ||||| |||||| |||| | ||| || |||| ||||| ||||| | |
|
|
| T |
8570102 |
gatgttgtccttgttggtggttcttctaggattcctaaagtgaggcagctattacaagagtttttccaggggaaggaattatgcaacagcattaaccctg |
8570003 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
| |||||||||||||| |||||||| |
|
|
| T |
8570002 |
atgaggctgttgcttacggtgcagc |
8569978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 339
Target Start/End: Complemental strand, 8581691 - 8581370
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
|||||||||| || || ||| ||||||| ||||||| |||||||||||||||| ||||| ||||| ||| ||||||||||||| || ||||| ||||| |
|
|
| T |
8581691 |
cttgtgagagagcgaaaaggacactttcatatgacactgaggccacaattgacctagattctatacatcaaggtattgacttctattcgtcaataactcg |
8581592 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||| || ||||||| | | || ||| ||||||||||||| |||| ||| | |||| |||||||| |||||| | |||||| | ||| ||| || |
|
|
| T |
8581591 |
ggccaagtttgagcaaatgaatatgaacctctttgaaaagtgtatggacactgttaatagttgtcttgccgatgctaagatggacaggggtagtgtagat |
8581492 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| ||||||||||||| ||||| ||||| ||||| ||| || | | ||||| || || |||||| |||| | ||| || |||| |||||| ||||| | |
|
|
| T |
8581491 |
gatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggagtttttccaggggaaggaattatgcaagagcatcaaccctg |
8581392 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgc |
339 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
8581391 |
atgaggctgttgcttatggtgc |
8581370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 6789324 - 6789179
Alignment:
| Q |
197 |
atggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatt |
296 |
Q |
| |
|
|||||| ||||||| ||| |||| ||||||||||||| || || ||||||||||||||| ||| ||||||||||||| |||||| ||| | ||||| |
|
|
| T |
6789324 |
atggacaagagtattgtaaatgatgttgtccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaaaggatt |
6789225 |
T |
|
| Q |
297 |
tgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||| |||||||| |
|
|
| T |
6789224 |
tgtgcatgagcatcaaccctgatgaggctgttgcttacggtgcagc |
6789179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 8559280 - 8559167
Alignment:
| Q |
57 |
aggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaaa |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||| || ||||||| ||| || ||||| ||||||||||| |
|
|
| T |
8559280 |
aggccacaattgacatagatgctatatgtcagggcattgacttgtgttcatcaatcacacgggctaagtttgagcaactgaatatggatctctttgaaaa |
8559181 |
T |
|
| Q |
157 |
atgtaaggagattg |
170 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
8559180 |
gtgtatggagattg |
8559167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 8383053 - 8383377
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
|||| ||||||||||| ||| ||||||| | ||| ||||||||| | ||||||||||||||| | | | |||||||||| || || ||| | ||||| |
|
|
| T |
8383053 |
cttgcgagagggcaaaaaggacactttcatttgatattgaggccgcgattgacatagatgctctgtatgagggtattgattttaattcttcagtcactcg |
8383152 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||| |||||||||| |||||| |||||||| |||||||| |||| ||||| |||| ||| ||||| ||||||| | ||| || |||||| ||| || |
|
|
| T |
8383153 |
ggccaaatttgagcaactcaatatggacctatttgaaaagtgtatggagactgttgagagctgtcttactgatgctaagatgaacaagagtagtgtagat |
8383252 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| |||| || | || ||||| || || ||||||||| ||| | ||||||||| |||||||||| | | ||| | || |||||||||| || | |
|
|
| T |
8383253 |
gatgttgttctcatcggtggttcttcgaggattcccaaagtgcaagagctattgcaacactttttcaattggaaggacctttgtgtgagcataaatcctg |
8383352 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
8383353 |
acgaggctgttgcttatggtgcagc |
8383377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 339
Target Start/End: Complemental strand, 8576317 - 8575996
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
||||||| | |||||| ||| ||||||| ||||||| ||| ||||||||||| |||||||||||| | | |||||||||||||| || ||||| || || |
|
|
| T |
8576317 |
cttgtgaaaaggcaaaaaggacactttcatatgacactgatgccacaattgaactagatgctatatataaaggtattgacttctgttcctcaataacccg |
8576218 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||| || |||||| | | || ||| ||||||||||||| |||| | | | |||| | |||||| ||||||| | |||||| ||| || ||| || |
|
|
| T |
8576217 |
ggccaagtttgaggaaatgaatatgaacctctttgaaaagtgtatgaatactgttaatatttgtcttgctgatgctaagatggacaagaatagtgtagat |
8576118 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| ||||||||||||| ||||| ||||| ||||| ||| || | | ||||| || || |||||||||| | ||| || || | |||||| ||||| | |
|
|
| T |
8576117 |
gatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggaggttttcaaggggaaggaattatgtaagagcatcaaccctg |
8576018 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgc |
339 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
8576017 |
atgaggctgttgcttatggtgc |
8575996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 339
Target Start/End: Complemental strand, 8102454 - 8102337
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
|||| |||||||| |||||| |||| ||||||||| | | | |||| ||||||||||| ||||| |||| ||| | |||| ||||| ||||||||||| |
|
|
| T |
8102454 |
ttgttcttgttggtggttcaactaggattcccaaagttcagcaactgttgcaagacttcttcaatggtaaggagctatgcaaaagcatcaaccccgacga |
8102355 |
T |
|
| Q |
322 |
ggctgttgcttatggtgc |
339 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8102354 |
ggctgttgcttatggtgc |
8102337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 339
Target Start/End: Complemental strand, 17260028 - 17259911
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
||||||||||||| || || ||||| ||||| ||| ||| | |||||||||| || || |||||||||| ||| || |||| |||||| ||||| || || |
|
|
| T |
17260028 |
ttgtccttgttggtggatcttctaggattccgaaagtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatcaaccctgatga |
17259929 |
T |
|
| Q |
322 |
ggctgttgcttatggtgc |
339 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
17259928 |
ggctgttgcttatggtgc |
17259911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 342
Target Start/End: Complemental strand, 8590629 - 8590305
Alignment:
| Q |
18 |
cttgtgagagggcaaagagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcg |
117 |
Q |
| |
|
||||||||||||| || ||| |||| || ||||| | |||||| ||||| | |||||||||||||| | |||| |||||||| | || | | ||||| |
|
|
| T |
8590629 |
cttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcggcatagatgctatatatgagggagttgacttccatttattagtcactcg |
8590530 |
T |
|
| Q |
118 |
ggcgaaatttgagcgactcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacat |
217 |
Q |
| |
|
||| || ||||| | ||| |||| ||| ||||||||||| ||| ||||||||| || |||| | | ||||| | |||||| ||| || ||| || |
|
|
| T |
8590529 |
ggccaagtttgaacaacttaacagggatctctttgaaaagtgtttggagattgtcaagaattgtttggctaatgctaagatggacaagaacattgtagat |
8590430 |
T |
|
| Q |
218 |
gaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccg |
317 |
Q |
| |
|
|| |||| |||||||| ||||| ||||| ||||||||| ||| | | ||||||||||||||||| | ||| | |||| | | || ||||| || || | |
|
|
| T |
8590429 |
gatgttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggggaaggatctttacaatagcatcaatccag |
8590330 |
T |
|
| Q |
318 |
acgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
| ||||||||||||||||||||||| |
|
|
| T |
8590329 |
atgaggctgttgcttatggtgcagc |
8590305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 27831256 - 27831376
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
||||||||||||| || || || || ||||||||| ||| | | |||||| |||||||||||||| | ||||||||||| |||||| || || || || |
|
|
| T |
27831256 |
ttgtccttgttggtggctcttcaaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctgatga |
27831355 |
T |
|
| Q |
322 |
ggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
27831356 |
ggctgttgcttttggtgcagc |
27831376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 8017794 - 8017911
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
|||| |||||||| |||||| |||||||||||||| | | | |||| |||||||| || ||||| |||| || | |||| ||| || ||||| ||||| |
|
|
| T |
8017794 |
ttgttcttgttggcggttcaactagaattcccaaagttcagcaactgttgcaagatttcttcaatggtaaagagctttgcaagagtatcaacccagacga |
8017893 |
T |
|
| Q |
322 |
ggctgttgcttatggtgc |
339 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8017894 |
ggctgttgcttatggtgc |
8017911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 7878114 - 7878234
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
|||| |||||||| || |||||||| |||| |||| ||| | | |||||||| |||||||| ||||| | |||| | |||| ||||| ||||| || || |
|
|
| T |
7878114 |
ttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgcaggacttttttaaggggaaggatatttgcagtagcatcaacccggatga |
7878213 |
T |
|
| Q |
322 |
ggctgttgcttatggtgcagc |
342 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
7878214 |
agctgttgcttatggtgcagc |
7878234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 10494749 - 10494875
Alignment:
| Q |
216 |
atgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccc |
315 |
Q |
| |
|
|||| ||||| ||||| || || || ||||| ||||||||| ||| | | ||||||| ||| ||||||||||| | ||| || | |||| | || ||||| |
|
|
| T |
10494749 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
10494848 |
T |
|
| Q |
316 |
cgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
10494849 |
agatgaggctgttgcttatggtgcagc |
10494875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 339
Target Start/End: Complemental strand, 17267726 - 17267609
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
||||||||||||| || || ||||| ||||| ||| ||| | |||||||||| |||| |||||||| | ||| || |||| || || ||||| || || |
|
|
| T |
17267726 |
ttgtccttgttggtgggtcttctaggattccgaaagtgcagcaactattgcagaacttcttcaaggggaaggaattatgcaaaagtatcaaccctgatga |
17267627 |
T |
|
| Q |
322 |
ggctgttgcttatggtgc |
339 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
17267626 |
ggctgttgcttatggtgc |
17267609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 342
Target Start/End: Complemental strand, 8667186 - 8667086
Alignment:
| Q |
242 |
tctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcag |
341 |
Q |
| |
|
||||| ||||||||| ||| | ||| ||||| ||| | ||||||||| | ||| || | |||| | || ||||| ||||||||||||||||||||||||| |
|
|
| T |
8667186 |
tctaggattcccaaagtgcaggaacaattgctagaatatttcaaggggaaggaattattcatgggtatcaacccagacgaggctgttgcttatggtgcag |
8667087 |
T |
|
| Q |
342 |
c |
342 |
Q |
| |
|
| |
|
|
| T |
8667086 |
c |
8667086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 256
Target Start/End: Complemental strand, 8601921 - 8601727
Alignment:
| Q |
62 |
acaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaaaatgta |
161 |
Q |
| |
|
||||||||||||||| | ||| | |||||||||| ||| |||||||| |||||||| || ||||||| |||||| ||||||||||| | || |||| |
|
|
| T |
8601921 |
acaattgacatagattccttatttgagggtattgatttccattcatcaatcactcgggccaagtttgagcaactcaatgtggacctctttaagaagtgta |
8601822 |
T |
|
| Q |
162 |
aggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaa |
256 |
Q |
| |
|
|||| |||| |||||||| |||||||| | || || |||||| || |||| |||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
8601821 |
tagagactgttgaaagttgtcttagtgatgctcagatcgaaaagagtagtgtggatgatgctgtccttgttggcggttcttctaggattcccaaa |
8601727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 1301156 - 1301128
Alignment:
| Q |
314 |
cccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1301156 |
cccgacgaggctgttgcttatggtgcagc |
1301128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 56 - 339
Target Start/End: Complemental strand, 12528457 - 12528174
Alignment:
| Q |
56 |
gaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaa |
155 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| || || || |||| ||| || |||||||||||||||| |
|
|
| T |
12528457 |
gaggctacaattgacatagatgctatatgtgagggcattgacttctgctcatcaatcactcgagccaagttcgagcaactgaatatggacctctttgaaa |
12528358 |
T |
|
| Q |
156 |
aatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaa |
255 |
Q |
| |
|
| |||| ||||| ||| |||||| | |||||| | |||||| |||||| ||| |||| ||||| |||||||| || || ||||| |||||||| |
|
|
| T |
12528357 |
agtgtatggagaccgttgaaagttgtttgaccgatgctaagatggacaagagtagtgtagatgatattgtacttgttggtggctcgtctaggattcccaa |
12528258 |
T |
|
| Q |
256 |
aatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgc |
339 |
Q |
| |
|
| || | | |||||||| || ||||||||||| | ||| || | || |||||| ||||| || |||||||||||||||||||| |
|
|
| T |
12528257 |
agtgaagcagctattgcaggagtttttcaagggcaaggagttatacaagagcatcaaccctgatgaggctgttgcttatggtgc |
12528174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 35132243 - 35132123
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
|||| ||||||||||| || ||||| ||||||||| ||| | | ||||||||| |||||||||| || | ||| ||||||| |||||| |||||||| || |
|
|
| T |
35132243 |
ttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaagggaaggagttgtgcaagagcattaaccccgatga |
35132144 |
T |
|
| Q |
322 |
ggctgttgcttatggtgcagc |
342 |
Q |
| |
|
|||||| |||||||| ||||| |
|
|
| T |
35132143 |
ggctgtagcttatggggcagc |
35132123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 9336314 - 9336392
Alignment:
| Q |
264 |
aactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||| ||| ||||||||||| | ||| || | |||| | || ||||| || ||||||||||||||||||||||| |
|
|
| T |
9336314 |
aactattgctagaatttttcaaggggaaggaattattcatgggtatcaacccagatgaggctgttgcttatggtgcagc |
9336392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 4678938 - 4679058
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
|||| ||||| || |||||||| || ||||||||| ||| | | ||||||||||||||||| ||| | | ||||||||||| ||| || ||||| || || |
|
|
| T |
4678938 |
ttgttcttgtgggtggttcatcgaggattcccaaagtgcaggatctattgcaagacttttttaagcggaaggatttgtgcaagagtatcaacccagatga |
4679037 |
T |
|
| Q |
322 |
ggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4679038 |
ggctgttgcttatggtgcagc |
4679058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 15594827 - 15594701
Alignment:
| Q |
216 |
atgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccc |
315 |
Q |
| |
|
|||| |||||| ||||||| || || ||||| ||||||||| ||| |||||||| | || |||||| |||| | ||| |||||||||||||| ||||| |
|
|
| T |
15594827 |
atgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactattgaaggattttttcgagggaaaggaattgtgcatgagcatcaaccc |
15594728 |
T |
|
| Q |
316 |
cgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
15594727 |
tgatgaggctgttgcttatggtgcagc |
15594701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 34467170 - 34467282
Alignment:
| Q |
223 |
tgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgag |
322 |
Q |
| |
|
||||||||| || || || ||||| ||||||||| ||| | | ||||||| ||||||||||| |||| |||| | |||| ||||| ||||| || ||| |
|
|
| T |
34467170 |
tgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatggtaaggatctatgcaatagcatcaaccctgatgag |
34467269 |
T |
|
| Q |
323 |
gctgttgcttatg |
335 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
34467270 |
gctgtcgcttatg |
34467282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 16657898 - 16658018
Alignment:
| Q |
222 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
321 |
Q |
| |
|
|||| ||||| || || |||||||| ||||||||| ||| | | ||||||||||||||||||||||| | |||||| |||| || || ||||| || || |
|
|
| T |
16657898 |
ttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagtatcaacccggatga |
16657997 |
T |
|
| Q |
322 |
ggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
16657998 |
agctgttgcttacggtgcagc |
16658018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 335
Target Start/End: Complemental strand, 12234533 - 12234364
Alignment:
| Q |
165 |
agattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaa |
264 |
Q |
| |
|
|||||||| ||||||||| |||||||| | |||||| | |||| ||| ||||| |||||||| |||| || || ||||| ||||||||| ||| | | |
|
|
| T |
12234533 |
agattgttgagagttgtcttagtgatgctaagatggacaaaagtagggtggatgaagttgtccttattggcgggtcctctaggattcccaaagtgcagca |
12234434 |
T |
|
| Q |
265 |
actattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatg |
335 |
Q |
| |
|
||||||||| || ||||||||||| | ||| |||||| ||| || ||||| || ||||| |||||||||| |
|
|
| T |
12234433 |
actattgcaggattttttcaaggggaaggagctgtgcaagagtattaaccctga-gaggcggttgcttatg |
12234364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 12245831 - 12245907
Alignment:
| Q |
266 |
ctattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||| || ||||||||||| || | ||| ||||||| |||||| ||||| |||||||||||||||||||| ||||| |
|
|
| T |
12245831 |
ctattacaggactttttcaacgggaaggaattgtgcaagagcattaaccctgacgaggctgttgcttatggggcagc |
12245907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 16662363 - 16662493
Alignment:
| Q |
212 |
gtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataa |
311 |
Q |
| |
|
|||||||| ||||| ||||| || || || ||||| ||||| ||| ||| | || |||||| |||| ||||| || | ||| ||||||| |||||| | |
|
|
| T |
16662363 |
gtacatgatattgttcttgtcgggggctcgtctaggattccaaaagtgcaggaattattgcgtaacttcttcaatgggaaggagttgtgcaagagcatca |
16662462 |
T |
|
| Q |
312 |
accccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
|||| || ||||||||||||||||| ||||| |
|
|
| T |
16662463 |
accctgatgaggctgttgcttatggggcagc |
16662493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 43625116 - 43625079
Alignment:
| Q |
305 |
agcataaaccccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
43625116 |
agcataaaccctgatgaggctgttgcttatggtgcagc |
43625079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 11999151 - 11999075
Alignment:
| Q |
266 |
ctattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagc |
342 |
Q |
| |
|
||||| || ||||||||||| || | ||| ||||||| |||||| ||||| || |||||||| |||||||| ||||| |
|
|
| T |
11999151 |
ctattacatgactttttcaacgggaaggagttgtgcaagagcattaaccctgatgaggctgtagcttatggggcagc |
11999075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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