View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15757_high_8 (Length: 238)
Name: NF15757_high_8
Description: NF15757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15757_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 5926381 - 5926579
Alignment:
| Q |
26 |
aataatgaaaaaacagacagatggatacggagtgacttttagacatcacataagctataaattataaaagacctcgtgtgaaaagcattgttgctaacta |
125 |
Q |
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||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
5926381 |
aataatgaaaaaacagacaaatagatacggagtgacttttagacgtcacataagctataaattataaaagacctcgtgtgaaaagcattattgctaacta |
5926480 |
T |
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| Q |
126 |
aaagtgaagtcaagtgggtgaagagaggacagggtcctactgctacacttacacaaagattagctactgcaaaagtctctttgcttttctacagtattat |
225 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
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| T |
5926481 |
aaagtgaagtcaagtgggtgaagagaggacagggtc------ctacacttacacaaagattagctactgcaaaagtctctttgcctttctacaatattat |
5926574 |
T |
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