View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15757_low_11 (Length: 240)
Name: NF15757_low_11
Description: NF15757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15757_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 24908440 - 24908234
Alignment:
| Q |
19 |
caaagctgcatttggagacaatattttggttctggtcgaatgggtatgtttctgagtccttttatatgaataatgttgaccatggaagttaaaaacggtt |
118 |
Q |
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| T |
24908440 |
caaagctgcatttggagacaatattttggttctggtcgaatgggtatgtttctgagtccttttatatgaataatgttgaccatggaagttaaaaacggtt |
24908341 |
T |
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| Q |
119 |
aatcatgctttacaacacaactgaaattaaggtttcacactctaaggagtttcctcacaagacgcccagtagaggaatttgaatgagttgagcagaaaac |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
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| T |
24908340 |
aatcatgctttacaacacaactgaaattaaggtttcacactctaaggagtttcctcagaagacgcccagtagaggaatttcaatgagttgagcagaaaac |
24908241 |
T |
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| Q |
219 |
acctatg |
225 |
Q |
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||||||| |
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| T |
24908240 |
acctatg |
24908234 |
T |
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