View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15758_high_29 (Length: 205)

Name: NF15758_high_29
Description: NF15758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15758_high_29
NF15758_high_29
[»] chr3 (65 HSPs)
chr3 (36-178)||(41409210-41409352)
chr3 (1-38)||(26306608-26306645)
chr3 (1-46)||(43868094-43868139)
chr3 (1-44)||(20862189-20862232)
chr3 (1-43)||(51284063-51284105)
chr3 (1-38)||(7181349-7181386)
chr3 (1-38)||(12050393-12050430)
chr3 (1-38)||(22103930-22103967)
chr3 (1-38)||(25149123-25149160)
chr3 (1-38)||(35868084-35868121)
chr3 (1-38)||(37728712-37728749)
chr3 (1-38)||(44543781-44543818)
chr3 (1-37)||(4024052-4024088)
chr3 (1-37)||(9499498-9499534)
chr3 (1-37)||(10220933-10220969)
chr3 (1-37)||(14428610-14428646)
chr3 (1-37)||(21756486-21756522)
chr3 (1-37)||(26593766-26593802)
chr3 (1-37)||(30041018-30041054)
chr3 (1-37)||(45252773-45252809)
chr3 (1-37)||(46049987-46050023)
chr3 (4-43)||(26806109-26806148)
chr3 (3-45)||(10044834-10044876)
chr3 (4-38)||(14428873-14428907)
chr3 (3-45)||(17589879-17589921)
chr3 (4-38)||(20862461-20862495)
chr3 (1-39)||(22832608-22832646)
chr3 (1-39)||(23700786-23700824)
chr3 (1-39)||(23719241-23719279)
chr3 (1-39)||(23737697-23737735)
chr3 (1-39)||(26221286-26221324)
chr3 (3-41)||(28875254-28875292)
chr3 (1-39)||(32963106-32963144)
chr3 (1-39)||(33868446-33868484)
chr3 (4-38)||(33868712-33868746)
chr3 (1-39)||(43701176-43701214)
chr3 (4-38)||(50647683-50647717)
chr3 (4-37)||(4024315-4024348)
chr3 (1-38)||(4759352-4759389)
chr3 (1-38)||(7051721-7051758)
chr3 (4-37)||(9779979-9780012)
chr3 (4-37)||(16434977-16435010)
chr3 (1-38)||(24087336-24087373)
chr3 (4-37)||(31531415-31531448)
chr3 (4-37)||(36005768-36005801)
chr3 (1-46)||(36098957-36099002)
chr3 (1-38)||(41392881-41392918)
chr3 (1-38)||(46845493-46845530)
chr3 (4-37)||(52058985-52059018)
chr3 (1-38)||(53361856-53361893)
chr3 (1-37)||(8321925-8321961)
chr3 (1-37)||(12683183-12683219)
chr3 (4-40)||(17591282-17591318)
chr3 (1-37)||(20656311-20656347)
chr3 (1-37)||(26058546-26058582)
chr3 (1-41)||(32568993-32569033)
chr3 (5-37)||(35711539-35711571)
chr3 (1-37)||(46878440-46878476)
chr3 (1-37)||(47066934-47066970)
chr3 (1-37)||(50647945-50647981)
chr3 (1-37)||(50726784-50726820)
chr3 (1-37)||(50786028-50786064)
chr3 (1-41)||(52177796-52177836)
chr3 (1-45)||(53164155-53164199)
chr3 (1-37)||(54782918-54782954)
[»] chr2 (48 HSPs)
chr2 (1-45)||(34062666-34062710)
chr2 (4-44)||(39833732-39833772)
chr2 (4-46)||(16108206-16108248)
chr2 (1-39)||(20252208-20252246)
chr2 (1-39)||(41450514-41450552)
chr2 (1-38)||(11201682-11201719)
chr2 (1-38)||(34883849-34883886)
chr2 (1-38)||(40607701-40607738)
chr2 (1-37)||(2438225-2438261)
chr2 (1-37)||(7491844-7491880)
chr2 (1-37)||(8716893-8716929)
chr2 (1-37)||(16669626-16669662)
chr2 (1-37)||(17408295-17408331)
chr2 (1-37)||(27560206-27560242)
chr2 (1-37)||(36131029-36131065)
chr2 (1-44)||(5664631-5664674)
chr2 (1-40)||(34113528-34113567)
chr2 (1-39)||(4711726-4711764)
chr2 (5-43)||(7531597-7531635)
chr2 (1-39)||(8841658-8841696)
chr2 (1-35)||(24300352-24300386)
chr2 (3-41)||(25523496-25523534)
chr2 (3-37)||(34113789-34113823)
chr2 (1-39)||(40680725-40680763)
chr2 (4-37)||(2438489-2438522)
chr2 (4-37)||(7492108-7492141)
chr2 (5-34)||(8031011-8031040)
chr2 (3-40)||(15227887-15227924)
chr2 (1-38)||(15228150-15228187)
chr2 (1-38)||(16805792-16805829)
chr2 (1-38)||(16845073-16845110)
chr2 (5-38)||(22182929-22182962)
chr2 (1-38)||(22897390-22897427)
chr2 (4-37)||(22897655-22897688)
chr2 (1-38)||(25624732-25624769)
chr2 (1-38)||(26322294-26322331)
chr2 (4-37)||(27560470-27560503)
chr2 (4-41)||(31751065-31751102)
chr2 (4-37)||(45474351-45474384)
chr2 (4-40)||(1360055-1360091)
chr2 (1-37)||(2060316-2060352)
chr2 (1-37)||(7116300-7116336)
chr2 (1-37)||(8912875-8912911)
chr2 (1-37)||(23788969-23789005)
chr2 (11-43)||(23789240-23789272)
chr2 (1-37)||(28566151-28566187)
chr2 (3-39)||(41422510-41422546)
chr2 (3-35)||(42629373-42629405)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-43)||(47634-47676)
[»] chr5 (34 HSPs)
chr5 (1-43)||(14913642-14913684)
chr5 (1-39)||(25601061-25601099)
chr5 (1-37)||(3497801-3497837)
chr5 (1-41)||(26894874-26894914)
chr5 (1-40)||(6673229-6673268)
chr5 (1-40)||(13759448-13759487)
chr5 (1-39)||(22527690-22527728)
chr5 (1-39)||(34662202-34662240)
chr5 (1-39)||(40004410-40004448)
chr5 (1-43)||(41384173-41384215)
chr5 (1-38)||(16127258-16127295)
chr5 (1-37)||(1265949-1265985)
chr5 (1-37)||(7951562-7951598)
chr5 (1-37)||(9828393-9828429)
chr5 (5-41)||(16440927-16440963)
chr5 (1-45)||(32147286-32147330)
chr5 (4-39)||(186362-186397)
chr5 (1-40)||(3028010-3028049)
chr5 (3-46)||(7940443-7940486)
chr5 (3-38)||(9020693-9020728)
chr5 (1-40)||(23260139-23260178)
chr5 (3-37)||(10734526-10734560)
chr5 (1-39)||(15190816-15190854)
chr5 (1-43)||(32478132-32478174)
chr5 (1-38)||(8949811-8949848)
chr5 (4-37)||(9828657-9828690)
chr5 (1-38)||(15521943-15521980)
chr5 (1-38)||(16153256-16153293)
chr5 (1-37)||(13862996-13863032)
chr5 (1-37)||(19571940-19571976)
chr5 (1-37)||(23286475-23286511)
chr5 (3-39)||(26889591-26889627)
chr5 (4-44)||(41383905-41383945)
chr5 (1-37)||(43060412-43060448)
[»] chr4 (61 HSPs)
chr4 (3-40)||(1028515-1028552)
chr4 (1-44)||(9328241-9328284)
chr4 (1-39)||(4035823-4035861)
chr4 (1-38)||(45742807-45742844)
chr4 (1-37)||(5375558-5375594)
chr4 (1-37)||(5743660-5743696)
chr4 (1-37)||(26626003-26626039)
chr4 (1-37)||(30771528-30771564)
chr4 (1-37)||(32032994-32033030)
chr4 (1-37)||(33413518-33413554)
chr4 (1-37)||(34273220-34273256)
chr4 (1-37)||(36130091-36130127)
chr4 (1-37)||(37518004-37518040)
chr4 (1-37)||(37522220-37522256)
chr4 (1-37)||(44294789-44294825)
chr4 (1-37)||(47806860-47806896)
chr4 (1-37)||(52977982-52978018)
chr4 (1-32)||(468506-468537)
chr4 (1-40)||(4415962-4416001)
chr4 (1-40)||(46949989-46950028)
chr4 (3-37)||(20391440-20391474)
chr4 (1-39)||(20455182-20455220)
chr4 (4-38)||(20747434-20747468)
chr4 (3-37)||(23777805-23777839)
chr4 (1-39)||(24754076-24754114)
chr4 (1-39)||(32899219-32899257)
chr4 (3-37)||(35675923-35675957)
chr4 (1-31)||(50451226-50451256)
chr4 (1-43)||(52870638-52870680)
chr4 (1-38)||(2615946-2615983)
chr4 (4-37)||(4036089-4036122)
chr4 (4-37)||(4549629-4549662)
chr4 (1-38)||(6807428-6807465)
chr4 (1-38)||(8343907-8343944)
chr4 (1-38)||(17610021-17610058)
chr4 (1-38)||(28501387-28501424)
chr4 (4-37)||(29014064-29014097)
chr4 (1-38)||(36391853-36391890)
chr4 (1-38)||(41334054-41334091)
chr4 (5-38)||(45096905-45096938)
chr4 (1-38)||(45097166-45097203)
chr4 (1-38)||(48030312-48030349)
chr4 (3-40)||(49228721-49228758)
chr4 (1-38)||(49793090-49793127)
chr4 (4-37)||(55631999-55632032)
chr4 (1-38)||(56432517-56432554)
chr4 (1-37)||(1859144-1859180)
chr4 (1-37)||(6753525-6753561)
chr4 (1-37)||(15241480-15241516)
chr4 (3-39)||(18872715-18872751)
chr4 (1-37)||(25124247-25124283)
chr4 (1-37)||(25708679-25708715)
chr4 (1-37)||(29520165-29520201)
chr4 (1-37)||(31937076-31937112)
chr4 (1-37)||(43387994-43388030)
chr4 (1-37)||(47228729-47228765)
chr4 (1-37)||(49373694-49373730)
chr4 (5-37)||(53277190-53277222)
chr4 (1-37)||(53564357-53564393)
chr4 (1-37)||(53629792-53629828)
chr4 (1-37)||(55563128-55563164)
[»] chr7 (35 HSPs)
chr7 (1-37)||(36711299-36711335)
chr7 (1-41)||(38858294-38858334)
chr7 (1-39)||(29286038-29286076)
chr7 (1-43)||(33858867-33858909)
chr7 (1-43)||(34979078-34979120)
chr7 (1-39)||(36698132-36698170)
chr7 (1-38)||(32814432-32814469)
chr7 (1-38)||(39871614-39871651)
chr7 (1-37)||(19920563-19920599)
chr7 (4-40)||(20075111-20075147)
chr7 (1-37)||(21295151-21295187)
chr7 (1-37)||(26255096-26255132)
chr7 (1-37)||(32643758-32643794)
chr7 (1-37)||(32872376-32872412)
chr7 (1-45)||(34012518-34012562)
chr7 (1-37)||(39197718-39197754)
chr7 (1-37)||(40300230-40300266)
chr7 (1-37)||(41026097-41026133)
chr7 (1-37)||(41252362-41252398)
chr7 (1-37)||(48521029-48521065)
chr7 (1-40)||(2290017-2290056)
chr7 (4-39)||(28060981-28061016)
chr7 (1-39)||(29177253-29177291)
chr7 (1-39)||(44547424-44547462)
chr7 (4-37)||(9036669-9036702)
chr7 (3-48)||(22991747-22991792)
chr7 (1-38)||(33381574-33381611)
chr7 (1-38)||(36646638-36646675)
chr7 (4-37)||(38428411-38428444)
chr7 (1-37)||(7449270-7449306)
chr7 (1-37)||(25247691-25247727)
chr7 (3-39)||(27813494-27813530)
chr7 (4-40)||(29176989-29177025)
chr7 (1-37)||(31457997-31458033)
chr7 (1-37)||(41003155-41003191)
[»] chr6 (32 HSPs)
chr6 (1-37)||(925934-925970)
chr6 (1-40)||(4844397-4844436)
chr6 (1-39)||(30248645-30248683)
chr6 (1-34)||(6147386-6147419)
chr6 (1-37)||(231106-231142)
chr6 (3-39)||(925672-925708)
chr6 (1-37)||(8743188-8743224)
chr6 (1-45)||(25045644-25045688)
chr6 (1-37)||(29036126-29036162)
chr6 (1-37)||(34301833-34301869)
chr6 (4-40)||(34741730-34741766)
chr6 (1-40)||(402622-402661)
chr6 (1-40)||(8670132-8670171)
chr6 (1-44)||(9388792-9388835)
chr6 (2-37)||(23398141-23398176)
chr6 (1-39)||(5457410-5457448)
chr6 (3-37)||(9038642-9038676)
chr6 (3-37)||(11847835-11847869)
chr6 (1-39)||(23604458-23604496)
chr6 (4-37)||(9388529-9388562)
chr6 (5-38)||(12144043-12144076)
chr6 (3-40)||(13647865-13647902)
chr6 (1-38)||(13901640-13901677)
chr6 (1-38)||(15498628-15498665)
chr6 (1-38)||(19097802-19097839)
chr6 (1-38)||(25197151-25197188)
chr6 (1-38)||(34915544-34915581)
chr6 (1-37)||(287415-287451)
chr6 (1-37)||(2090658-2090694)
chr6 (1-37)||(10195994-10196030)
chr6 (1-37)||(13648130-13648166)
chr6 (1-37)||(33487833-33487869)
[»] chr1 (51 HSPs)
chr1 (1-45)||(25509201-25509245)
chr1 (1-40)||(52431175-52431214)
chr1 (1-39)||(4102715-4102753)
chr1 (1-38)||(11741396-11741433)
chr1 (1-38)||(37951950-37951987)
chr1 (3-44)||(38920232-38920273)
chr1 (1-38)||(39497432-39497469)
chr1 (1-38)||(45039411-45039448)
chr1 (1-37)||(943638-943674)
chr1 (1-37)||(1039382-1039418)
chr1 (1-37)||(1046288-1046324)
chr1 (1-37)||(15811233-15811269)
chr1 (1-37)||(23541979-23542015)
chr1 (1-37)||(30290265-30290301)
chr1 (1-37)||(36694854-36694890)
chr1 (1-37)||(36710955-36710991)
chr1 (4-40)||(39362931-39362967)
chr1 (1-37)||(39363195-39363231)
chr1 (4-40)||(39750118-39750154)
chr1 (1-37)||(44649629-44649665)
chr1 (1-37)||(46075868-46075904)
chr1 (1-37)||(49907021-49907057)
chr1 (4-39)||(1047990-1048025)
chr1 (3-38)||(11353065-11353100)
chr1 (1-36)||(30289863-30289898)
chr1 (4-38)||(9202244-9202278)
chr1 (1-39)||(14090239-14090277)
chr1 (3-37)||(15892566-15892600)
chr1 (3-37)||(34931079-34931113)
chr1 (1-43)||(41855474-41855516)
chr1 (5-39)||(52601989-52602023)
chr1 (4-37)||(1039121-1039154)
chr1 (4-37)||(1046027-1046060)
chr1 (1-38)||(7763750-7763787)
chr1 (3-40)||(9413328-9413365)
chr1 (1-34)||(13343776-13343809)
chr1 (3-40)||(14171793-14171830)
chr1 (4-37)||(23542243-23542276)
chr1 (1-38)||(27037268-27037305)
chr1 (4-37)||(39497697-39497730)
chr1 (1-38)||(42276162-42276199)
chr1 (4-37)||(44646535-44646568)
chr1 (4-37)||(44649893-44649926)
chr1 (1-37)||(7783991-7784027)
chr1 (1-37)||(14171542-14171578)
chr1 (1-37)||(16456636-16456672)
chr1 (3-39)||(28885840-28885876)
chr1 (4-44)||(30289595-30289635)
chr1 (1-37)||(39750382-39750418)
chr1 (1-37)||(43456622-43456658)
chr1 (1-37)||(45335885-45335921)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-40)||(12062-12101)
[»] chr8 (53 HSPs)
chr8 (1-40)||(18754141-18754180)
chr8 (1-43)||(14584132-14584174)
chr8 (3-45)||(23487056-23487098)
chr8 (1-38)||(8251934-8251971)
chr8 (1-38)||(13153927-13153964)
chr8 (3-40)||(26016566-26016603)
chr8 (1-38)||(28572045-28572082)
chr8 (1-38)||(28579638-28579675)
chr8 (1-38)||(32675758-32675795)
chr8 (1-38)||(34568489-34568526)
chr8 (1-37)||(51096-51132)
chr8 (1-37)||(1774342-1774378)
chr8 (1-37)||(2944273-2944309)
chr8 (1-37)||(8951429-8951465)
chr8 (3-39)||(17856779-17856815)
chr8 (1-37)||(28192176-28192212)
chr8 (1-37)||(33745896-33745932)
chr8 (1-37)||(39029178-39029214)
chr8 (1-41)||(40529303-40529343)
chr8 (4-40)||(40530410-40530446)
chr8 (3-38)||(8797027-8797062)
chr8 (1-40)||(12802608-12802647)
chr8 (4-39)||(29279460-29279495)
chr8 (1-39)||(2152241-2152279)
chr8 (1-39)||(5593419-5593457)
chr8 (3-37)||(42885054-42885088)
chr8 (4-38)||(44250858-44250892)
chr8 (4-37)||(11798869-11798902)
chr8 (4-37)||(13154192-13154225)
chr8 (1-38)||(29598223-29598260)
chr8 (4-41)||(32475231-32475268)
chr8 (4-37)||(43653943-43653976)
chr8 (1-38)||(43654204-43654241)
chr8 (5-45)||(2944005-2944045)
chr8 (1-37)||(5162304-5162340)
chr8 (1-37)||(7758910-7758946)
chr8 (1-37)||(8566202-8566238)
chr8 (1-37)||(8948352-8948388)
chr8 (1-37)||(9035540-9035576)
chr8 (1-37)||(11798605-11798641)
chr8 (1-37)||(17069845-17069881)
chr8 (1-37)||(17578392-17578428)
chr8 (5-37)||(18455720-18455752)
chr8 (1-37)||(18641381-18641417)
chr8 (3-39)||(28965730-28965766)
chr8 (1-37)||(36177104-36177140)
chr8 (1-41)||(38781142-38781182)
chr8 (1-37)||(38878721-38878757)
chr8 (1-37)||(40741265-40741301)
chr8 (4-40)||(40741528-40741564)
chr8 (1-37)||(44251122-44251158)
chr8 (1-37)||(44502620-44502656)
chr8 (1-37)||(45260223-45260259)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-39)||(24631-24669)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-39)||(51683-51721)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-45)||(3783-3828)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-44)||(246449-246490)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-38)||(259123-259160)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-40)||(355334-355371)
[»] scaffold0025 (2 HSPs)
scaffold0025 (4-37)||(65378-65411)
scaffold0025 (1-38)||(65638-65675)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-37)||(5151-5187)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-37)||(10183-10219)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-37)||(7141-7177)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-37)||(14349-14385)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-37)||(18497-18533)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-37)||(3438-3474)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-37)||(48654-48690)


Alignment Details
Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 41409210 - 41409352
Alignment:
Q  36 tataatttttcaaaaagtcgtagttcttatgtggtatggagacaaattggttagaagaggaaaataagatacggtacaagatattcggtggatgatttgg 135  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41409210 tataatttttcaaaaagtcgtagttcttatgcggtatggagacaaattggttagaagagaaaaataagatacggtacaagatattcggtggatgatttgg 41409309  T
Q  136 tttagtgtcggataaaaatatgggaaatgttaactaacatttc 178  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  41409310 tttagtgtcgggtaaaaatatgggaaatgttaactaacatttc 41409352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26306608 - 26306645
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26306608 tctcaaaagggtcttataattaggaacggagggagtat 26306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43868139 - 43868094
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataatttttc 46  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  43868139 tctcaaaagggtcttataattagggacggagggagtatattttttc 43868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20862232 - 20862189
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  20862232 tctcaaaagggtcttataattagggacggatggagtataatttt 20862189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51284063 - 51284105
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  51284063 tctcaaaagggtcttataattagggacggagggagtattattt 51284105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7181386 - 7181349
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7181386 tctcaaaagggtcttataattagggacggagggagtat 7181349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12050393 - 12050430
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12050393 tctcaaaagggtcttataattagggacggagggagtat 12050430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22103930 - 22103967
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22103930 tctcaaaagggtcttataattagggacggagggagtat 22103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25149123 - 25149160
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25149123 tctcaaaagggtcttataattagggacggagggagtat 25149160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35868084 - 35868121
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  35868084 tctcaaaagggtcttataattagggacggagggagtat 35868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37728749 - 37728712
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37728749 tctcaaaagggtcttataattagggacggagggagtat 37728712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44543818 - 44543781
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  44543818 tctcaaaagggtcttataattagggacggagggagtat 44543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4024088 - 4024052
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4024088 tctcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9499498 - 9499534
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9499498 tctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10220969 - 10220933
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  10220969 tctcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14428646 - 14428610
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  14428646 tctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21756522 - 21756486
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21756522 tctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26593766 - 26593802
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26593766 tctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30041018 - 30041054
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30041018 tctcaaaagagtcttataattaggaacggagggagta 30041054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45252809 - 45252773
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  45252809 tctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46049987 - 46050023
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46049987 tctcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 26806148 - 26806109
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataattt 43  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  26806148 caaaagggtcttataattagggacggagggagtattattt 26806109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 10044876 - 10044834
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||| ||||||||||||| |||||||||||||| |||||    
T  10044876 tcaaaaggatcttataattagggacggagggagtatatttttt 10044834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 14428873 - 14428907
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagtat 14428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 17589879 - 17589921
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||    
T  17589879 tcaaaagtgtcttataattagggacggaggtagtataattttt 17589921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 20862461 - 20862495
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagtat 20862495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22832608 - 22832646
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  22832608 tctcaaaagggtcttataattagggacggaaggagtata 22832646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23700786 - 23700824
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  23700786 tctcaaaaaggtcttataattagggacggagggagtata 23700824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23719241 - 23719279
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  23719241 tctcaaaaaggtcttataattagggacggagggagtata 23719279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23737697 - 23737735
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  23737697 tctcaaaaaggtcttataattagggacggagggagtata 23737735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26221324 - 26221286
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  26221324 tctcaaaagagtcttataattagggacggagggagtata 26221286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 28875254 - 28875292
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  28875254 tcaaaagggtcttataattagggacggaggtagtataat 28875292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32963106 - 32963144
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  32963106 tctcaaaaggatcttataattagggacggagggagtata 32963144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33868484 - 33868446
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  33868484 tctcaaaaggatcttataattagggacggagggagtata 33868446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 33868712 - 33868746
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagtat 33868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43701214 - 43701176
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  43701214 tctcaaaagggtcttataattagggacagagggagtata 43701176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 50647717 - 50647683
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagtat 50647683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4759352 - 4759389
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  4759352 tctcaaaagggtcttataattagggacggaggtagtat 4759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7051721 - 7051758
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  7051721 tctcaaaaggatcttataattagggacggagggagtat 7051758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24087336 - 24087373
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  24087336 tctcaaaagggtcttataattagggacggaggtagtat 24087373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36099002 - 36098957
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataatttttc 46  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||||    
T  36099002 tctcaaaagggtcttataattagggacggatggagtaatatttttc 36098957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41392881 - 41392918
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  41392881 tctcaaaagggtcttataattagggacggaggtagtat 41392918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46845493 - 46845530
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  46845493 tctcaaaagggtcttataattagggacggaggtagtat 46845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 53361856 - 53361893
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  53361856 tctcaaaatggtcttataattagggacggagggagtat 53361893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8321961 - 8321925
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  8321961 tctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12683183 - 12683219
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  12683183 tctcaaaatggtcttataattagggacggagggagta 12683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 17591318 - 17591282
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||| | |||||||||||||    
T  17591318 caaaagggtcttataattagggatggagggagtataa 17591282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20656311 - 20656347
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||  ||||||||||||||||||||||||||    
T  20656311 tctcaaaagaatcttataattaggaacggagggagta 20656347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26058582 - 26058546
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  26058582 tctcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32569033 - 32568993
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||||| ||||||||||| ||||| ||||||||||    
T  32569033 tctcaaaagggttttataattagggacggatggagtataat 32568993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 35711539 - 35711571
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||||||||||||    
T  35711539 aaaagggtcctataattaggaacggagggagta 35711571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46878440 - 46878476
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  46878440 tctcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 47066970 - 47066934
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  47066970 tctcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50647945 - 50647981
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  50647945 tctcaaaagggtcttataattagagacggagggagta 50647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50726784 - 50726820
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  50726784 tctcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 50786064 - 50786028
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  50786064 tctcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52177836 - 52177796
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataat 41  Q
    ||||||||||||| |||||||||| ||||||| ||||||||    
T  52177836 tctcaaaagggtcctataattagggacggaggtagtataat 52177796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53164199 - 53164155
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||||| ||||||||||||| ||||||| |||| |||||||    
T  53164199 tctcaaaaggatcttataattagggacggaggtagtacaattttt 53164155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 54782918 - 54782954
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  54782918 tctcaaaagggtcttataattagggacgaagggagta 54782954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34062666 - 34062710
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  34062666 tctcaaaagggtcttataattagggacggagggagtataattttt 34062710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39833772 - 39833732
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataatttt 44  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagtataatttt 39833732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 16108248 - 16108206
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataatttttc 46  Q
    ||||||||||||||||||||| ||||||||||||||| |||||    
T  16108248 caaaagggtcttataattagggacggagggagtataagttttc 16108206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20252246 - 20252208
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  20252246 tctcaaaagggtcttataattagggacggagggagtata 20252208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41450552 - 41450514
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41450552 tctcaaaagggtcttataattagggacggagggagtata 41450514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11201719 - 11201682
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11201719 tctcaaaagggtcttataattagggacggagggagtat 11201682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34883849 - 34883886
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34883849 tctcaaaagggtcttataattagggacggagggagtat 34883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40607738 - 40607701
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40607738 tctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2438261 - 2438225
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  2438261 tctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7491880 - 7491844
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  7491880 tctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8716893 - 8716929
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8716893 tctcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16669662 - 16669626
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  16669662 tctcaaaagggtcttataattaagaacggagggagta 16669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17408295 - 17408331
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17408295 tctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27560242 - 27560206
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27560242 tctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36131029 - 36131065
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36131029 tctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5664674 - 5664631
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||    
T  5664674 tctcaaaaaggtcttataattagggacggagggagtattatttt 5664631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34113567 - 34113528
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  34113567 tctcaaaagggtcttataattagggacggatggagtataa 34113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4711764 - 4711726
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  4711764 tctcaaaagggtcttttaattagggacggagggagtata 4711726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 7531635 - 7531597
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtataattt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  7531635 aaaagggtcttataattagaaacgaagggagtataattt 7531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8841658 - 8841696
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  8841658 tctcaaaagggtcttataattaaggacggagggagtata 8841696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24300352 - 24300386
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  24300352 tctcaaaagggtcttataattagaaacggagggag 24300386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 25523534 - 25523496
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  25523534 tcaaaatggtcttataattaggaacggaggtagtataat 25523496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 34113789 - 34113823
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40680763 - 40680725
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  40680763 tctcaaaagggtcttataattagggacggatggagtata 40680725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 8031011 - 8031040
Alignment:
Q  5 aaaagggtcttataattaggaacggaggga 34  Q
    ||||||||||||||||||||||||||||||    
T  8031011 aaaagggtcttataattaggaacggaggga 8031040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15227924 - 15227887
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  15227924 tcaaaagggtcctataattagggacggagggagtataa 15227887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15228150 - 15228187
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  15228150 tctcaaaaggatcttataattagggacggagggagtat 15228187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16805792 - 16805829
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  16805792 tctcaaaaggatcttataattagggacggagggagtat 16805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16845073 - 16845110
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  16845073 tctcaaaaggatcttataattagggacggagggagtat 16845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 22182929 - 22182962
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||| |||||||||||||    
T  22182929 aaaagggtcttataattagggacggagggagtat 22182962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22897427 - 22897390
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  22897427 tctcaaaaggatcttataattagggacggagggagtat 22897390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25624769 - 25624732
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  25624769 tctcaaaaaggtcttataattagggacggagggagtat 25624732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26322294 - 26322331
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  26322294 tctcaaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 27560470 - 27560503
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  27560470 caaaatggtcttataattaggaacggagggagta 27560503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 31751102 - 31751065
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataat 41  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  31751102 caaaagggtcttataattagggacggaggtagtataat 31751065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 1360055 - 1360091
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||| |||||||||||||| |||||||||||||||    
T  1360055 caaaagagtcttataattagggacggagggagtataa 1360091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2060352 - 2060316
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  2060352 tctcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7116300 - 7116336
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  7116300 tctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8912875 - 8912911
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  8912875 tctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23789005 - 23788969
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  23789005 tctcaaaagggtcttataattaaggacggagggagta 23788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 23789240 - 23789272
Alignment:
Q  11 gtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||| ||||||||||||||||||    
T  23789240 gtcttataattagggacggagggagtataattt 23789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28566187 - 28566151
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  28566187 tctcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 41422546 - 41422510
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  41422546 tcaaaagggtcttataattagggacggaggtagtata 41422510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggag 35  Q
    |||||||||||||||||||||| ||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47676 - 47634
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  47676 tctcaaaagggtcttataattagggacggagggagtataattt 47634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14913684 - 14913642
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  14913684 tctcaaaagggtcttataattagggacggagggagtataattt 14913642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25601061 - 25601099
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25601061 tctcaaaagggtcttataattaggaacggagggagtata 25601099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3497801 - 3497837
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  3497801 tctcaaaagggtcttataattaggaacggagggagta 3497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26894874 - 26894914
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  26894874 tctcaaaagggtcttataattagggacggagggagtataat 26894914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6673229 - 6673268
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6673229 tctcaaaagggtcttataattagggacggagggagtataa 6673268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13759448 - 13759487
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  13759448 tctcaaaagggtcttataattaggaacggaggtagtataa 13759487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22527728 - 22527690
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22527728 tctcaaaagggtcttataattagggacggagggagtata 22527690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34662240 - 34662202
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34662240 tctcaaaagggtcttataattagggacggagggagtata 34662202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40004410 - 40004448
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40004410 tctcaaaagggtcttataattagggacggagggagtata 40004448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41384173 - 41384215
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  41384173 tctcaaaaggatcttataattagggacggagggagtataattt 41384215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16127295 - 16127258
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16127295 tctcaaaagggtcttataattagggacggagggagtat 16127258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1265985 - 1265949
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1265985 tctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7951598 - 7951562
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9828429 - 9828393
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9828429 tctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 16440963 - 16440927
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16440963 aaaagggtcttataattagggacggagggagtataat 16440927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32147330 - 32147286
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  32147330 tctcaaaaaggtcttataattagggacggagggagtataagtttt 32147286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 186362 - 186397
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagtata 186397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3028049 - 3028010
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  3028049 tctcaaaagggtcttataattagggacggaggtagtataa 3028010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 7940486 - 7940443
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataatttttc 46  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||    
T  7940486 tcaaaagggtcttataattagggacggaggtagtatattttttc 7940443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 9020728 - 9020693
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagtat 9020693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23260139 - 23260178
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  23260139 tctcaaaagggtcttataattagggacggaggtagtataa 23260178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 10734526 - 10734560
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15190816 - 15190854
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  15190816 tctcaaaagagtcttataattagggacggagggagtata 15190854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32478174 - 32478132
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||| |||||| || ||||||||    
T  32478174 tctcaaaagggtcttataattagggacggagagaatataattt 32478132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8949848 - 8949811
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  8949848 tctcaaaagggtcttataattagggacggaggtagtat 8949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15521943 - 15521980
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  15521943 tctcaaaagggttttataattagggacggagggagtat 15521980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16153256 - 16153293
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  16153256 tctcaaaagggtcttataattagggacggatggagtat 16153293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13862996 - 13863032
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  13862996 tctcaaaagggtcatataattagggacggagggagta 13863032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19571940 - 19571976
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23286475 - 23286511
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  23286475 tctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 26889627 - 26889591
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  26889627 tcaaaagggtcctataattagggacggagggagtata 26889591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41383945 - 41383905
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataatttt 44  Q
    ||||||| ||||||||||||| ||||||||||||| |||||    
T  41383945 caaaaggatcttataattagggacggagggagtattatttt 41383905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43060412 - 43060448
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  43060412 tctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1028552 - 1028515
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1028552 tcaaaagggtcttataattaggaacggagggagtataa 1028515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9328241 - 9328284
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  9328241 tctcaaaagggtcttataattagggacggagggagtacaatttt 9328284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4035861 - 4035823
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4035861 tctcaaaagggtcttataattagggacggagggagtata 4035823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45742807 - 45742844
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  45742807 tctcaaaagggtcttataattagggacggagggagtat 45742844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5375558 - 5375594
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5375558 tctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5743660 - 5743696
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5743660 tctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26626003 - 26626039
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26626003 tctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30771564 - 30771528
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30771564 tctcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32032994 - 32033030
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32032994 tctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33413554 - 33413518
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33413554 tctcaaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34273220 - 34273256
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  34273220 tctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36130091 - 36130127
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  36130091 tctcaaaagggtcttataattaggaacggaggtagta 36130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37518040 - 37518004
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  37518040 tctcaaaagggtcttataattaggaacggaggtagta 37518004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37522256 - 37522220
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  37522256 tctcaaaagggtcttataattaggaacggaggtagta 37522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44294825 - 44294789
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44294825 tctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 47806896 - 47806860
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47806896 tctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 52978018 - 52977982
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  52978018 tctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 468506 - 468537
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagg 32  Q
    ||||||||||||||||||||||||||||||||    
T  468506 tctcaaaagggtcttataattaggaacggagg 468537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4416001 - 4415962
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  4416001 tctcaaaagggtcttataattagggacggaggtagtataa 4415962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46950028 - 46949989
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  46950028 tctcaaaagggtcttataattagggacggaggtagtataa 46949989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 20391440 - 20391474
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  20391440 tcaaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20455182 - 20455220
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  20455182 tctcaaaagggtcttataattagggacggaggtagtata 20455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 20747434 - 20747468
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagtat 20747468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 23777805 - 23777839
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||| ||||    
T  23777805 tcaaaagggtcttataattaggaacggaggtagta 23777839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24754114 - 24754076
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  24754114 tctcaaaaggatcttataattagggacggagggagtata 24754076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32899219 - 32899257
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  32899219 tctcaaaagggtcttataattagggacggaggtagtata 32899257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 35675923 - 35675957
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 50451226 - 50451256
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggag 31  Q
    |||||||||||||||||||||||||||||||    
T  50451226 tctcaaaagggtcttataattaggaacggag 50451256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52870680 - 52870638
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||  ||||||||||||| ||||    
T  52870680 tctcaaaagggtcttataattagagacggagggagtattattt 52870638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2615946 - 2615983
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  2615946 tctcaaaagggtcttatgattagggacggagggagtat 2615983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6807465 - 6807428
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| || ||||||||||    
T  6807465 tctcaaaagggtcttataattagggacagagggagtat 6807428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8343944 - 8343907
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  8343944 tctcaaaaaggtcttataattaggaacggaaggagtat 8343907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17610021 - 17610058
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  17610021 tctcaaaaggatcttataattagggacggagggagtat 17610058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28501387 - 28501424
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  28501387 tctcaaaagggtcttataattagggacggaggtagtat 28501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36391890 - 36391853
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  36391890 tctcaaaagggtcttataattaaggacggagggagtat 36391853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41334054 - 41334091
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  41334054 tctcaaaatggtcttataattaggaacggaggtagtat 41334091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 45096938 - 45096905
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||| ||||||||||||||||||||||||    
T  45096938 aaaagggtcctataattaggaacggagggagtat 45096905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45097166 - 45097203
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  45097166 tctcaaaagggtcttataattagggacggatggagtat 45097203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48030349 - 48030312
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  48030349 tctcaaaagggtcttataattagggatggagggagtat 48030312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 49228721 - 49228758
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||  |||||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagggagtataa 49228758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49793127 - 49793090
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  49793127 tctcaaaagggtcttataattagggacggaggtagtat 49793090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 56432554 - 56432517
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  56432554 tctcaaaagggtcttataattagggacggaggtagtat 56432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1859180 - 1859144
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  1859180 tctcaaaaaggtcttataattagggacggagggagta 1859144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6753561 - 6753525
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  6753561 tctcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15241516 - 15241480
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  15241516 tctcaaaagagtcttataattagggacggagggagta 15241480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 18872751 - 18872715
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  18872751 tcaaaagggtcttataattagggacggaggtagtata 18872715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25124247 - 25124283
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  25124247 tctcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25708679 - 25708715
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  25708679 tctcaaaaaggtcttataattagggacggagggagta 25708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29520165 - 29520201
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  29520165 tctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31937112 - 31937076
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  31937112 tctcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43387994 - 43388030
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  43387994 tctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 47228729 - 47228765
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  47228729 tctcaaaagggtcttataattagggacggaggaagta 47228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49373694 - 49373730
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  49373694 tctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 53277190 - 53277222
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||| ||||||||||||    
T  53277190 aaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 53564357 - 53564393
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  53564357 tctcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 53629828 - 53629792
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  53629828 tctcaaaagggtcttataattagggatggagggagta 53629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 55563128 - 55563164
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  55563128 tctcaaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36711299 - 36711335
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  36711299 tctcaaaagggtcttataattaggaacggagggagta 36711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38858334 - 38858294
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  38858334 tctcaaaagggtcttataattagggacggagggagtataat 38858294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29286038 - 29286076
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29286038 tctcaaaagggtcttataattagggacggagggagtata 29286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33858867 - 33858909
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  33858867 tctcaaaagggtcttataattagggacggagggagtattattt 33858909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34979078 - 34979120
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  34979078 tctcaaaagagtcttataattagggacggagggagtataattt 34979120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36698132 - 36698170
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36698132 tctcaaaagggtcttataattagggacggagggagtata 36698170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32814469 - 32814432
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32814469 tctcaaaagggtcttataattagggacggagggagtat 32814432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39871614 - 39871651
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39871614 tctcaaaagggtcttataattagggacggagggagtat 39871651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19920599 - 19920563
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19920599 tctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 20075111 - 20075147
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagtataa 20075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21295187 - 21295151
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21295187 tctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26255132 - 26255096
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26255132 tctcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32643758 - 32643794
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  32643758 tctcaaaagggtcttataattaggaacggaggtagta 32643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32872376 - 32872412
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32872376 tctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34012518 - 34012562
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||    
T  34012518 tctcaaaagggtcttataattagggacggaggtagtattattttt 34012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39197754 - 39197718
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39197754 tctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40300266 - 40300230
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  40300266 tctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41026097 - 41026133
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41026097 tctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41252362 - 41252398
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41252362 tctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48521065 - 48521029
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  48521065 tctcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2290017 - 2290056
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  2290017 tctcaaaagggtcttataattagggacggaggtagtataa 2290056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 28060981 - 28061016
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagtata 28061016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29177253 - 29177291
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  29177253 tctcaaaaggatcttataattagggacggagggagtata 29177291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44547462 - 44547424
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  44547462 tctcaaaaaggtcttataattagggacggagggagtata 44547424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9036702 - 9036669
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||||||||||| ||||    
T  9036702 caaaagggtcttataattaggaacggaggaagta 9036669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 22991747 - 22991792
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataatttttcaa 48  Q
    |||||||| ||||||||||||| ||||||| ||||| |||||||||    
T  22991747 tcaaaaggatcttataattagggacggaggtagtattatttttcaa 22991792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33381574 - 33381611
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  33381574 tctcaaaagggtcttataattagggacggaggtagtat 33381611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36646638 - 36646675
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  36646638 tctcaaaagggtcttctaattagggacggagggagtat 36646675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 38428411 - 38428444
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  38428411 caaaagggtcttataattagggacggagggagta 38428444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7449306 - 7449270
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  7449306 tctcaaaatggtcttataattagggacggagggagta 7449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25247691 - 25247727
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  25247691 tctcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 27813530 - 27813494
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  27813530 tcaaaagggtcttataattagggacggaggtagtata 27813494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 29177025 - 29176989
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||  |||||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagtataa 29176989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31458033 - 31457997
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  31458033 tctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41003155 - 41003191
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  41003155 tctcaaaagggtcttataattaaggacggagggagta 41003191  T

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Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 925934 - 925970
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  925934 tctcaaaagggtcttataattaggaacggagggagta 925970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4844436 - 4844397
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4844436 tctcaaaagggtcttataattagggacggagggagtataa 4844397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30248683 - 30248645
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30248683 tctcaaaagggtcttataattagggacggagggagtata 30248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6147419 - 6147386
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggaggga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  6147419 tctcaaaagggtcttataattaggaacggaggga 6147386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 231106 - 231142
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  231106 tctcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 925708 - 925672
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||| |||||||||||||||||||||||||    
T  925708 tcaaaagggtcctataattaggaacggagggagtata 925672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8743224 - 8743188
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8743224 tctcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25045644 - 25045688
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||    
T  25045644 tctcaaaagggtcttataattagggacggaggtagtattattttt 25045688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 29036162 - 29036126
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  29036162 tctcaaaaggatcttataattaggaacggagggagta 29036126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34301833 - 34301869
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  34301833 tctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34741730 - 34741766
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagtataa 34741766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 402622 - 402661
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  402622 tctcaaaagggtcttataattagggacggaggtagtataa 402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8670171 - 8670132
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  8670171 tctcaaaagggtctgataattaggaacggaggtagtataa 8670132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9388792 - 9388835
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||    
T  9388792 tctcaaaaaggtcttataattagggacggagggagtatgatttt 9388835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 23398141 - 23398176
Alignment:
Q  2 ctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23398141 ctcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5457448 - 5457410
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  5457448 tctcaaaaaggtcttataattagggacggagggagtata 5457410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 9038676 - 9038642
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 11847835 - 11847869
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23604496 - 23604458
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  23604496 tctcaaaagggtcttataattagggacggaggtagtata 23604458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 12144043 - 12144076
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12144043 aaaagggtcttataattagggacggagggagtat 12144076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 13647902 - 13647865
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  13647902 tcaaaagggtcttataataagggacggagggagtataa 13647865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13901677 - 13901640
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  13901677 tctcaaaagggtcttataattagggacggaggtagtat 13901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15498665 - 15498628
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  15498665 tctcaaaagggtcttataattagggacggaggtagtat 15498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19097802 - 19097839
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  19097802 tctcaaaagggtcttataattagagacggagggagtat 19097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25197188 - 25197151
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  25197188 tctcaaaaggatcttataattagggacggagggagtat 25197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34915544 - 34915581
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  34915544 tctcaaaagggtcttataattagggacggaggtagtat 34915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 287415 - 287451
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  287415 tctcaaaaaggtcttataattagggacggagggagta 287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2090694 - 2090658
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  2090694 tctcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10195994 - 10196030
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  10195994 tctcaaaagggtcttataattagagacggagggagta 10196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13648130 - 13648166
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  13648130 tctcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33487869 - 33487833
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  33487869 tctcaaaaaggtcttataattagggacggagggagta 33487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25509245 - 25509201
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  25509245 tctcaaaagggtcttataattagggacggaggtagtataattttt 25509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52431175 - 52431214
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  52431175 tctcaaaagggtcttataattagggacggagggagtataa 52431214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4102715 - 4102753
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4102715 tctcaaaagggtcttataattagggacggagggagtata 4102753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11741433 - 11741396
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11741433 tctcaaaagggtcttataattagggacggagggagtat 11741396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37951950 - 37951987
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37951950 tctcaaaagggtcttataattagggacggagggagtat 37951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 38920273 - 38920232
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  38920273 tcaaaagggtcttataattagggacggagggagtatgatttt 38920232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39497469 - 39497432
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39497469 tctcaaaagggtcttataattagggacggagggagtat 39497432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45039448 - 45039411
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  45039448 tctcaaaagggtcttataattagggacggagggagtat 45039411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 943638 - 943674
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  943638 tctcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1039382 - 1039418
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1039382 tctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1046288 - 1046324
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1046288 tctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15811233 - 15811269
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15811233 tctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23542015 - 23541979
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23542015 tctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30290301 - 30290265
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30290301 tctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36694890 - 36694854
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36694890 tctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36710991 - 36710955
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36710991 tctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 39362967 - 39362931
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagtataa 39362931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39363195 - 39363231
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39363195 tctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 39750154 - 39750118
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagtataa 39750118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44649665 - 44649629
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44649665 tctcaaaagggtcttataattagggacggagggagta 44649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46075868 - 46075904
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46075868 tctcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49907057 - 49907021
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49907057 tctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 1048025 - 1047990
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagtata 1047990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 11353065 - 11353100
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||||||||| |||||    
T  11353065 tcaaaagggtcttataattaggaacggaggtagtat 11353100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 30289863 - 30289898
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagt 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  30289863 tctcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 9202278 - 9202244
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagtat 9202244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14090239 - 14090277
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  14090239 tctcaaaagggtcttataaataggaacggagagagtata 14090277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 15892566 - 15892600
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||| ||||    
T  15892566 tcaaaagggtcttataattaggaacggaggtagta 15892600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 34931113 - 34931079
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||||||||| ||||    
T  34931113 tcaaaagggtcttataattaggaacggaggtagta 34931079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41855474 - 41855516
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||    
T  41855474 tctcaaaagggtcttataattagggacggatggagtattattt 41855516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 52602023 - 52601989
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  52602023 aaaagggtcttataattagggacggagggagtata 52601989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 1039154 - 1039121
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  1039154 caaaatggtcttataattaggaacggagggagta 1039121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 1046060 - 1046027
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||| ||||||||||||||||||||||||||||    
T  1046060 caaaatggtcttataattaggaacggagggagta 1046027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7763750 - 7763787
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  7763750 tctcaaaagggtcttataattagggacggaggtagtat 7763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9413328 - 9413365
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  9413328 tcaaaagggtcttataattagggacggaggtagtataa 9413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13343809 - 13343776
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggaggga 34  Q
    |||||||||||||||||||||||| |||||||||    
T  13343809 tctcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 14171793 - 14171830
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  14171793 tcaaaagggtcctataattagggacggagggagtataa 14171830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27037305 - 27037268
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  27037305 tctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42276162 - 42276199
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  42276162 tctcaaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7784027 - 7783991
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  7784027 tctcaaaagggtattataattagggacggagggagta 7783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14171578 - 14171542
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  14171578 tctcaaaagggtcttataattagagacggagggagta 14171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16456672 - 16456636
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  16456672 tctcagaagggtcttataattagggacggagggagta 16456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 28885876 - 28885840
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  28885876 tcaaaagggtcttataattagggacggaggtagtata 28885840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 30289635 - 30289595
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||| |||||||||||||| ||||||||||||| |||||    
T  30289635 caaaagagtcttataattagggacggagggagtattatttt 30289595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39750382 - 39750418
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  39750382 tctcaaaagggtcttataattagggacagagggagta 39750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43456622 - 43456658
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  43456622 tctcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45335921 - 45335885
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  45335921 tctcaaaagggtcttataattagggagggagggagta 45335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12101 - 12062
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12101 tctcaaaagggtcttataattagggacggagggagtataa 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18754180 - 18754141
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18754180 tctcaaaagggtcttataattagggacggagggagtataa 18754141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14584132 - 14584174
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataattt 43  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    
T  14584132 tctcaaaagggtcttataattaggaacggaggtagtattattt 14584174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 23487098 - 23487056
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataattttt 45  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  23487098 tcaaaagggtcttataattagggacggaggtagtataattttt 23487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8251934 - 8251971
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  8251934 tctcaaaagggtcttataattagggacggagggagtat 8251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13153964 - 13153927
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13153964 tctcaaaagggtcttataattagggacggagggagtat 13153927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 26016603 - 26016566
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagtataa 26016566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28572082 - 28572045
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28572082 tctcaaaagggtcttataattagggacggagggagtat 28572045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28579675 - 28579638
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28579675 tctcaaaagggtcttataattagggacggagggagtat 28579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32675758 - 32675795
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32675758 tctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34568526 - 34568489
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34568526 tctcaaaagggtcttataattagggacggagggagtat 34568489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 51096 - 51132
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  51096 tctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1774378 - 1774342
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1774378 tctcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2944273 - 2944309
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  2944273 tctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8951429 - 8951465
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8951429 tctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 17856779 - 17856815
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagtata 17856815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28192176 - 28192212
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28192176 tctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33745896 - 33745932
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33745896 tctcaaaaggatcttataattaggaacggagggagta 33745932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39029214 - 39029178
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39029214 tctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40529343 - 40529303
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  40529343 tctcaaaaggatcttataattagggacggagggagtataat 40529303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 40530410 - 40530446
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagtataa 40530446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 8797062 - 8797027
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||||||||| |||||    
T  8797062 tcaaaagggtcttataattaggaacggaggtagtat 8797027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12802647 - 12802608
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  12802647 tctcaaaagggtcttataattagggacggaggtagtataa 12802608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 29279460 - 29279495
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtata 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagtata 29279495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2152241 - 2152279
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  2152241 tctcaaaagggtcttataattagggacggaggtagtata 2152279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5593457 - 5593419
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  5593457 tctcaaaagggtcttataattagggacggaaggagtata 5593419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 42885088 - 42885054
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 44250892 - 44250858
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagtat 44250858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29598260 - 29598223
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  29598260 tctcaaaagggtcttataattagagacggagggagtat 29598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32475231 - 32475268
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataat 41  Q
    ||||||||||||||||||||| || |||||||||||||    
T  32475231 caaaagggtcttataattagggacagagggagtataat 32475268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43654204 - 43654241
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  43654204 tctcaaaagagtcttataattagggacggagggagtat 43654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 2944045 - 2944005
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagtataattttt 45  Q
    ||||||||| |||||||||| ||||||||||||| ||||||    
T  2944045 aaaagggtcctataattagggacggagggagtattattttt 2944005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5162340 - 5162304
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  5162340 tctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7758910 - 7758946
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  7758910 tctcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8566238 - 8566202
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  8566238 tctcaaaagagtcttataattaggaacggaggtagta 8566202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8948352 - 8948388
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  8948352 tctcaaaagggtcttataattagggacggatggagta 8948388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9035540 - 9035576
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  9035540 tctcaaaatggtcttataattagggacggagggagta 9035576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11798641 - 11798605
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  11798641 tctcaaaagggtcttataattagggacagagggagta 11798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17069845 - 17069881
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  17069845 tctcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17578428 - 17578392
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  17578428 tctcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 18455752 - 18455720
Alignment:
Q  5 aaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||| ||||||||||||    
T  18455752 aaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18641381 - 18641417
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  18641381 tctcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 28965730 - 28965766
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||| |||||| |||||||    
T  28965730 tcaaaagggtcttataattagggacggagagagtata 28965766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36177104 - 36177140
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  36177104 tctcaaaagagtcttataattagggacggagggagta 36177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38781142 - 38781182
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtataat 41  Q
    |||||||||||||||||||||| | ||||||| ||||||||    
T  38781142 tctcaaaagggtcttataattatggacggaggtagtataat 38781182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38878757 - 38878721
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  38878757 tctcaaaagggtcttataattagagacggagggagta 38878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40741301 - 40741265
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  40741301 tctcaaaagggtattataattagggacggagggagta 40741265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 40741528 - 40741564
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagtataa 40  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  40741528 caaaatggtcttataattagggacggagggagtataa 40741564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44251122 - 44251158
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  44251122 tctcaaaatggtcttataattagggacggagggagta 44251158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44502656 - 44502620
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  44502656 tctcaaaaggatcttataattagggacggagggagta 44502620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45260259 - 45260223
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  45260259 tctcaaaagggtcttataattaggaacagaggtagta 45260223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24631 - 24669
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24631 tctcaaaaggatcttataattaggaacggagggagtata 24669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51683 - 51721
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtata 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51683 tctcaaaagggtcttataattagggacggagggagtata 51721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3783 - 3828
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta-taattttt 45  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  3783 tctcaaaagggtcttataattagggacggagggagtagtaattttt 3828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 246490 - 246449
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataatttt 44  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  246490 tcaaaagggtcttataattaggaacggaggtagtattatttt 246449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 259123 - 259160
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  259123 tctcaaaagggtcttataattagggacggagggagtat 259160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 355334 - 355371
Alignment:
Q  3 tcaaaagggtcttataattaggaacggagggagtataa 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagtataa 355371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  4 caaaagggtcttataattaggaacggagggagta 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 65638 - 65675
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagtat 38  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  65638 tctcaaaaaggtcttataattagggacggagggagtat 65675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5187 - 5151
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  5187 tctcaaaagggtcttataattagggacggaggtagta 5151  T

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Target: scaffold0549 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10183 - 10219
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  10183 tctcaaaagggtcttataattagggacggaggtagta 10219  T

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Target: scaffold0339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7141 - 7177
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  7141 tctcaaaagggtcttataattagggacggaggaagta 7177  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14349 - 14385
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  14349 tctcaaaagggtcttataattaaggacggagggagta 14385  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18533 - 18497
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  18533 tctcaaaagggtcttataattagggacggaggtagta 18497  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3474 - 3438
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  3474 tctcaaaagggtcttataattagggacggaggtagta 3438  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48690 - 48654
Alignment:
Q  1 tctcaaaagggtcttataattaggaacggagggagta 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  48690 tctcaaaagggtcttataattagggacggaggtagta 48654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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