View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15758_low_9 (Length: 404)
Name: NF15758_low_9
Description: NF15758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15758_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 18 - 392
Target Start/End: Original strand, 31855166 - 31855540
Alignment:
| Q |
18 |
tcaagaaatttactcaccaatattattagcttttacacatgaggtatgacagactcgattattgtacttcatgtactaatgaatcatgatcattaacata |
117 |
Q |
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| T |
31855166 |
tcaagaaatttactcaccaatattattagcttttacacatgaggtatgacagactcgattattgtacttcatgtactaatgaatcatgatcattaacata |
31855265 |
T |
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| Q |
118 |
tgattaaatattacatcttatgagatattcaattgatcagaaatcaaaaaattggaagtcctctcatttaaccaaaggaactctcatggatcctaattac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31855266 |
tgattaaatattacatcttatgagatattcaattgatcagaaatcaaaaaattggaagtcctctcatttaaccaaaggaactctcatggatcctaattac |
31855365 |
T |
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| Q |
218 |
agcttgcctcctaatgttgccttgataactcttgaggtagatcaaatgcaacacataaatgttctatctctcttgactctgagaactcacgtagttcatt |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
31855366 |
agcttgcctcctaatgttgccttgataactcttgaggtagatcaaatgcaacacataaatgttatatctctcttgactctgagaactcacgtagttcatt |
31855465 |
T |
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| Q |
318 |
ctccacaccgaaaaaatcttataatcaattaacttggatgtttttcaggagttggatggtggaatcgttcttctc |
392 |
Q |
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||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31855466 |
ctctacaccgaaaaaatcttggaatcaattaacttggatgtttttcaggagttggatggtggaatcgttcttctc |
31855540 |
T |
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