View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15759_high_3 (Length: 401)
Name: NF15759_high_3
Description: NF15759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15759_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 20 - 385
Target Start/End: Original strand, 34110445 - 34110810
Alignment:
| Q |
20 |
atactcttatccactagcccccagtttaggagttataaaacaagattttggtctttttacaaatatgtcatcaatttccaatgttgttgctccatggtgc |
119 |
Q |
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| T |
34110445 |
atactcttatccactagcccccagtttaggagttataaaacaagattttggtctttttacaaatatgtcatcaatttccaatgttgttgctccatggtgc |
34110544 |
T |
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| Q |
120 |
aagaagcatggaaatgaccatgatggttgtgtagtttggtatgactatcctcctacagtttgcgacgaaggagatgacgacgacgacggtggctatgatt |
219 |
Q |
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| T |
34110545 |
aagaagcatggaaatgaccatgatggttgtgtagtttggtatgactatcctcctacagtttgcgacgaaggagacgatgacgacgacggtggctatgatt |
34110644 |
T |
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| Q |
220 |
atgctccagcagcataaccagtttatgattttggttactacttcaacagctcaactagtgttatttactacctaactggttaatgaagctcttctttttg |
319 |
Q |
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| T |
34110645 |
atgctccagcagcataaccagtttatgattttggttactacttcaacagctcaactagtgttatttactacctaactggttaatgaagctcttctttttg |
34110744 |
T |
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| Q |
320 |
tttgtaacaacaattagtgctaattgaaaaaacattaggaatatatatctgctctactctacctat |
385 |
Q |
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| T |
34110745 |
tttgtaacaacaattagtgctaattgaaaaaacattaggaatatatatctgctctactctacctat |
34110810 |
T |
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