View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15759_high_4 (Length: 392)
Name: NF15759_high_4
Description: NF15759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15759_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 27 - 382
Target Start/End: Complemental strand, 2409098 - 2408743
Alignment:
| Q |
27 |
gttatgatacatcacttgtggtagccctatattcccaaaccaaagttactcaaatcgtgattcttcatcaaggagagttctacgcatcttgttatcattg |
126 |
Q |
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| T |
2409098 |
gttatgatacatcacttgtggtaaccctatattcccaaatcaaagttgctcaaatcgtgattcttcatcaaggagagttctacacatcttgttatcaatg |
2408999 |
T |
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| Q |
127 |
ttgaggtaaagatttgttcatgattattagatatattacttgttttcattgaaatgcaacttattatcgttttctaagttattcttaatcttcatcgttg |
226 |
Q |
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| T |
2408998 |
ttgaggtaaagatttgttcataattattagatatattacttgttttcattgaaatgcaacttattatcgttttctaagttattcttaatcttcatcgttg |
2408899 |
T |
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| Q |
227 |
tttagagttatttacttgaattttgaatatggttgaaataattaggttaatttcttgttaaatagagtgcattgaagtgttcctactgtagtatactgtg |
326 |
Q |
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| T |
2408898 |
tttagagttatttacttgaattttgaatatggttgaaataattaggttaatttcttgttaaatagagtgcattgaagtgttcctactgtattatactgtg |
2408799 |
T |
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| Q |
327 |
gccaattagttatgatgactaatctgagtaaataattgttatacctacatcctatg |
382 |
Q |
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| T |
2408798 |
gccaattagttatgatgactaatctgagtaaataattgttatacctacatcctatg |
2408743 |
T |
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