View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15760_low_5 (Length: 298)
Name: NF15760_low_5
Description: NF15760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15760_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 51805859 - 51806133
Alignment:
| Q |
17 |
acagacatgggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatattttaaagacgagaaatcaggaagtgttcctgacaggtgca |
116 |
Q |
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| T |
51805859 |
acagacatgggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatattttaaagacgagaaatcaggaagtgttcctgacaggtgca |
51805958 |
T |
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| Q |
117 |
tcttgttcatgttgagttgttctaagtgagaacagttgattatgctgtttgttgggaacttgaattttgtattaccgaggtttaggacacgtaaatttgg |
216 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51805959 |
tcttgttcatgttgagtagttctaagtgagaacagttgattatgctgtttgttgggaacttgaattttgtattaccgaggtttaggacacgtaaatttgg |
51806058 |
T |
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| Q |
217 |
aaggtaagagcaaatatttgatgggaagtttccggaaagtgatgaccaacctgaaaaatcaagactgatgatgtc |
291 |
Q |
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| T |
51806059 |
aaggtaagagcaaatatttgacgggaagtttccggaaagtgatgaccaacctgaaaaatcaagacttatgatgtc |
51806133 |
T |
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