View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15760_low_9 (Length: 221)
Name: NF15760_low_9
Description: NF15760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15760_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 2311197 - 2311392
Alignment:
| Q |
18 |
agattgaagctcataattgtgtatattttatttataatctttccttctctatcttccttatgctatataagccccacccccatcctctcttatcaattga |
117 |
Q |
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|||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
2311197 |
agattgaagctcataattgtgtatatttgatttataatcatcccttctctatcttccttatgctatataagccccacgcccatcctctcttatcaattga |
2311296 |
T |
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| Q |
118 |
atcgtgactacaattccttcaacttctattataacacatagaattccttcaatttctactatgccactattgaaaccctctttgtcctttgctact |
213 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |||| |
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| T |
2311297 |
atcgtgactacaattccttcaacttctattatatcacatagaattccttcaatttatactatgccactattgaggccctctttgtccattgttact |
2311392 |
T |
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