View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15761_high_10 (Length: 360)

Name: NF15761_high_10
Description: NF15761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15761_high_10
NF15761_high_10
[»] chr8 (55 HSPs)
chr8 (1-360)||(5849264-5849630)
chr8 (1-331)||(5842554-5842884)
chr8 (5-163)||(5886856-5887021)
chr8 (1-115)||(5948201-5948316)
chr8 (12-118)||(5920641-5920747)
chr8 (1-98)||(5983814-5983911)
chr8 (219-360)||(44061724-44061867)
chr8 (12-98)||(5959307-5959393)
chr8 (281-351)||(10592266-10592336)
chr8 (229-360)||(25987718-25987851)
chr8 (284-360)||(7598715-7598791)
chr8 (227-360)||(12284199-12284334)
chr8 (281-360)||(2730946-2731025)
chr8 (282-360)||(23754693-23754771)
chr8 (215-360)||(33604999-33605142)
chr8 (283-359)||(37133850-37133925)
chr8 (281-360)||(10692446-10692524)
chr8 (281-360)||(12655929-12656008)
chr8 (281-360)||(43285948-43286027)
chr8 (258-360)||(43632299-43632400)
chr8 (258-360)||(3547120-3547224)
chr8 (283-360)||(26026903-26026980)
chr8 (228-360)||(10839412-10839546)
chr8 (281-360)||(4054272-4054350)
chr8 (281-360)||(21526266-21526345)
chr8 (281-360)||(25830231-25830310)
chr8 (281-360)||(27325765-27325843)
chr8 (281-360)||(31249510-31249588)
chr8 (281-360)||(33279534-33279613)
chr8 (281-360)||(35067167-35067246)
chr8 (281-360)||(45405538-45405617)
chr8 (258-360)||(33100431-33100533)
chr8 (323-360)||(5601014-5601051)
chr8 (323-360)||(5639569-5639606)
chr8 (283-360)||(43397788-43397864)
chr8 (260-360)||(7271859-7271958)
chr8 (263-360)||(37449391-37449489)
chr8 (260-360)||(42768214-42768312)
chr8 (281-360)||(6440088-6440167)
chr8 (281-360)||(10902712-10902790)
chr8 (281-360)||(22719447-22719525)
chr8 (281-360)||(39692302-39692381)
chr8 (281-360)||(43715882-43715960)
chr8 (318-360)||(1068613-1068655)
chr8 (281-359)||(12898915-12898992)
chr8 (281-360)||(13106484-13106565)
chr8 (282-360)||(14707330-14707408)
chr8 (318-360)||(33451585-33451627)
chr8 (298-360)||(34810644-34810705)
chr8 (327-360)||(5772003-5772036)
chr8 (323-360)||(24479243-24479279)
chr8 (323-360)||(34435764-34435801)
chr8 (328-360)||(4671998-4672030)
chr8 (280-360)||(6511844-6511924)
chr8 (280-360)||(12734996-12735076)
[»] chr7 (44 HSPs)
chr7 (232-360)||(47448833-47448963)
chr7 (281-359)||(27568025-27568103)
chr7 (258-360)||(38259070-38259172)
chr7 (281-360)||(41018670-41018749)
chr7 (281-360)||(43159560-43159639)
chr7 (281-360)||(44895558-44895636)
chr7 (281-358)||(31445326-31445403)
chr7 (281-360)||(10700171-10700250)
chr7 (281-360)||(24532928-24533007)
chr7 (281-360)||(26018047-26018126)
chr7 (281-360)||(30941393-30941471)
chr7 (281-360)||(38656542-38656621)
chr7 (263-359)||(43025348-43025445)
chr7 (281-360)||(44189296-44189374)
chr7 (281-360)||(48062063-48062142)
chr7 (225-360)||(34978303-34978440)
chr7 (287-360)||(23910242-23910315)
chr7 (281-360)||(12007171-12007250)
chr7 (225-360)||(13152600-13152737)
chr7 (281-360)||(38340368-38340447)
chr7 (281-360)||(41189529-41189607)
chr7 (281-360)||(42552906-42552985)
chr7 (266-360)||(32529825-32529918)
chr7 (280-354)||(33578299-33578373)
chr7 (227-314)||(49128910-49128999)
chr7 (323-360)||(22623395-22623432)
chr7 (283-360)||(46260079-46260156)
chr7 (215-360)||(28249487-28249634)
chr7 (287-359)||(33774946-33775018)
chr7 (258-360)||(34108819-34108919)
chr7 (281-360)||(39497287-39497366)
chr7 (236-327)||(41650747-41650838)
chr7 (281-360)||(49069256-49069335)
chr7 (318-360)||(2008880-2008922)
chr7 (318-360)||(32777729-32777771)
chr7 (280-314)||(32803741-32803775)
chr7 (318-360)||(35586795-35586837)
chr7 (281-358)||(4292437-4292513)
chr7 (281-314)||(39155111-39155144)
chr7 (285-360)||(30667767-30667840)
chr7 (308-360)||(37899330-37899382)
chr7 (281-360)||(38347549-38347629)
chr7 (281-360)||(38956604-38956680)
chr7 (328-360)||(46880909-46880941)
[»] chr1 (62 HSPs)
chr1 (258-360)||(9566921-9567025)
chr1 (225-360)||(48858830-48858967)
chr1 (260-360)||(8350161-8350260)
chr1 (260-360)||(37685338-37685437)
chr1 (260-360)||(37700081-37700180)
chr1 (260-360)||(649775-649877)
chr1 (216-360)||(47642525-47642671)
chr1 (264-360)||(19947711-19947805)
chr1 (263-360)||(29359646-29359742)
chr1 (280-360)||(30570534-30570612)
chr1 (281-360)||(9897547-9897626)
chr1 (281-360)||(9987958-9988037)
chr1 (197-360)||(24806123-24806286)
chr1 (281-360)||(30735279-30735357)
chr1 (318-360)||(4213079-4213121)
chr1 (281-359)||(31088189-31088266)
chr1 (283-356)||(37985374-37985446)
chr1 (281-360)||(5771733-5771812)
chr1 (281-360)||(15470042-15470121)
chr1 (281-352)||(18434810-18434880)
chr1 (281-360)||(23645418-23645496)
chr1 (281-360)||(33100815-33100893)
chr1 (281-360)||(35369707-35369785)
chr1 (260-360)||(37274996-37275097)
chr1 (281-360)||(37619551-37619629)
chr1 (281-360)||(48261146-48261225)
chr1 (281-360)||(49065350-49065428)
chr1 (281-360)||(49660186-49660265)
chr1 (281-360)||(49931560-49931639)
chr1 (318-360)||(48983690-48983732)
chr1 (258-360)||(49020366-49020468)
chr1 (283-360)||(25672348-25672425)
chr1 (258-360)||(31826957-31827061)
chr1 (258-360)||(50148953-50149056)
chr1 (259-345)||(50775118-50775206)
chr1 (280-360)||(30535998-30536078)
chr1 (281-360)||(21433386-21433465)
chr1 (281-352)||(27533470-27533541)
chr1 (281-360)||(40861246-40861324)
chr1 (281-360)||(43775213-43775291)
chr1 (281-360)||(49570003-49570082)
chr1 (21-64)||(51044692-51044735)
chr1 (281-360)||(51848887-51848965)
chr1 (281-360)||(52362489-52362567)
chr1 (318-360)||(27742624-27742666)
chr1 (241-356)||(30744997-30745114)
chr1 (241-356)||(30766448-30766565)
chr1 (283-360)||(4466702-4466778)
chr1 (283-360)||(11947802-11947879)
chr1 (281-314)||(14983825-14983858)
chr1 (258-360)||(15083011-15083114)
chr1 (287-360)||(34008187-34008259)
chr1 (283-360)||(39712385-39712462)
chr1 (280-360)||(3558853-3558933)
chr1 (300-360)||(7919066-7919126)
chr1 (288-360)||(9882652-9882723)
chr1 (263-360)||(27465023-27465121)
chr1 (280-344)||(40680808-40680872)
chr1 (283-315)||(41062765-41062797)
chr1 (281-345)||(47721431-47721494)
chr1 (281-345)||(47728423-47728486)
chr1 (287-351)||(52437510-52437574)
[»] chr2 (45 HSPs)
chr2 (1-73)||(42788739-42788811)
chr2 (281-360)||(38911915-38911994)
chr2 (281-359)||(1907749-1907827)
chr2 (263-360)||(6336259-6336356)
chr2 (227-360)||(38821373-38821506)
chr2 (281-360)||(24766159-24766238)
chr2 (283-360)||(7502415-7502492)
chr2 (281-360)||(18254195-18254273)
chr2 (281-360)||(27490716-27490794)
chr2 (225-360)||(36587398-36587532)
chr2 (263-360)||(21611626-21611723)
chr2 (280-360)||(8848680-8848759)
chr2 (215-287)||(44239118-44239190)
chr2 (236-360)||(2144726-2144852)
chr2 (281-360)||(9207597-9207675)
chr2 (281-360)||(13766295-13766373)
chr2 (281-360)||(29349513-29349591)
chr2 (281-360)||(41042261-41042339)
chr2 (260-360)||(43487386-43487487)
chr2 (318-360)||(14871854-14871896)
chr2 (280-360)||(7367875-7367956)
chr2 (287-360)||(30339861-30339933)
chr2 (281-360)||(9760024-9760103)
chr2 (215-360)||(31578441-31578588)
chr2 (328-360)||(39234212-39234244)
chr2 (281-332)||(3104519-3104570)
chr2 (260-360)||(6511258-6511359)
chr2 (281-360)||(12784384-12784463)
chr2 (285-360)||(18737863-18737938)
chr2 (236-335)||(31548342-31548441)
chr2 (285-360)||(44050022-44050097)
chr2 (228-270)||(1079053-1079095)
chr2 (318-360)||(11965800-11965842)
chr2 (282-360)||(38874602-38874679)
chr2 (258-360)||(44977460-44977565)
chr2 (254-344)||(19642620-19642712)
chr2 (281-314)||(33616518-33616551)
chr2 (323-360)||(37731227-37731264)
chr2 (283-360)||(39147772-39147849)
chr2 (280-360)||(9634421-9634500)
chr2 (263-360)||(14233685-14233783)
chr2 (280-360)||(22525979-22526058)
chr2 (318-358)||(37316837-37316877)
chr2 (281-349)||(42532724-42532792)
chr2 (323-359)||(44059619-44059655)
[»] chr4 (56 HSPs)
chr4 (220-360)||(149407-149549)
chr4 (258-358)||(37060326-37060426)
chr4 (225-359)||(51577622-51577758)
chr4 (258-360)||(50721705-50721809)
chr4 (280-360)||(21392577-21392657)
chr4 (215-360)||(39158112-39158259)
chr4 (217-360)||(5932683-5932828)
chr4 (258-360)||(24045251-24045353)
chr4 (263-360)||(44539743-44539839)
chr4 (283-360)||(46634107-46634183)
chr4 (227-360)||(56557740-56557873)
chr4 (281-360)||(9362665-9362742)
chr4 (281-360)||(37997263-37997339)
chr4 (258-354)||(53801720-53801815)
chr4 (281-360)||(2738253-2738332)
chr4 (281-360)||(5249875-5249954)
chr4 (281-360)||(10250501-10250579)
chr4 (281-360)||(14443205-14443284)
chr4 (281-360)||(26910210-26910287)
chr4 (281-360)||(27354340-27354418)
chr4 (260-360)||(37297056-37297157)
chr4 (260-360)||(43174991-43175092)
chr4 (281-360)||(50831741-50831820)
chr4 (281-360)||(51255753-51255832)
chr4 (258-360)||(2575751-2575853)
chr4 (258-360)||(29175234-29175335)
chr4 (258-360)||(42853583-42853687)
chr4 (263-360)||(5622465-5622563)
chr4 (281-360)||(11068697-11068773)
chr4 (287-359)||(15175554-15175625)
chr4 (263-360)||(23369298-23369396)
chr4 (280-360)||(26908068-26908146)
chr4 (215-360)||(38519800-38519947)
chr4 (281-360)||(1795967-1796046)
chr4 (281-360)||(2401617-2401696)
chr4 (280-339)||(6520816-6520875)
chr4 (281-360)||(26732232-26732310)
chr4 (285-360)||(31995905-31995980)
chr4 (325-360)||(32130265-32130300)
chr4 (285-360)||(39478442-39478516)
chr4 (260-360)||(40348801-40348902)
chr4 (281-360)||(52895234-52895313)
chr4 (281-360)||(53654736-53654814)
chr4 (281-351)||(14603474-14603544)
chr4 (318-360)||(32012903-32012945)
chr4 (225-360)||(54000705-54000842)
chr4 (318-360)||(56271367-56271409)
chr4 (287-360)||(6494885-6494957)
chr4 (281-314)||(11546886-11546919)
chr4 (282-359)||(20381359-20381436)
chr4 (323-360)||(21014061-21014098)
chr4 (217-270)||(50783050-50783102)
chr4 (283-360)||(51986049-51986125)
chr4 (263-335)||(26492040-26492112)
chr4 (287-359)||(35897709-35897780)
chr4 (328-360)||(50506400-50506432)
[»] chr5 (53 HSPs)
chr5 (215-360)||(17097719-17097866)
chr5 (216-360)||(36562971-36563115)
chr5 (258-360)||(19844271-19844373)
chr5 (281-360)||(13309889-13309968)
chr5 (228-360)||(611871-612005)
chr5 (281-360)||(28306118-28306196)
chr5 (230-360)||(54710-54839)
chr5 (229-360)||(13089713-13089846)
chr5 (282-360)||(24468272-24468350)
chr5 (280-358)||(35646391-35646469)
chr5 (258-360)||(1274365-1274468)
chr5 (283-360)||(21155994-21156071)
chr5 (258-360)||(33958220-33958324)
chr5 (280-360)||(11148518-11148598)
chr5 (281-360)||(4719657-4719736)
chr5 (281-360)||(7076554-7076632)
chr5 (281-360)||(7287175-7287254)
chr5 (281-360)||(19521989-19522067)
chr5 (281-360)||(22098262-22098341)
chr5 (230-360)||(14011324-14011454)
chr5 (286-359)||(24860031-24860105)
chr5 (281-359)||(26791230-26791307)
chr5 (231-314)||(31683429-31683514)
chr5 (258-335)||(7552928-7553005)
chr5 (280-345)||(26686903-26686968)
chr5 (280-345)||(26956634-26956699)
chr5 (287-360)||(27546070-27546143)
chr5 (236-345)||(14532526-14532637)
chr5 (280-360)||(35075560-35075640)
chr5 (281-360)||(189689-189767)
chr5 (281-360)||(5168190-5168268)
chr5 (281-360)||(8097256-8097335)
chr5 (281-360)||(12718366-12718444)
chr5 (281-360)||(14321940-14322019)
chr5 (281-360)||(15479476-15479554)
chr5 (281-360)||(18660766-18660844)
chr5 (281-360)||(19481168-19481246)
chr5 (281-360)||(33037527-33037605)
chr5 (281-360)||(40829421-40829500)
chr5 (258-312)||(3564594-3564648)
chr5 (282-360)||(5721804-5721881)
chr5 (287-357)||(8686901-8686970)
chr5 (282-360)||(22649648-22649725)
chr5 (323-360)||(32872925-32872962)
chr5 (281-314)||(34080287-34080320)
chr5 (323-360)||(40039297-40039334)
chr5 (280-360)||(1079937-1080016)
chr5 (262-302)||(6596397-6596437)
chr5 (263-360)||(16690506-16690605)
chr5 (280-360)||(18258778-18258857)
chr5 (217-277)||(20478460-20478520)
chr5 (287-359)||(32540006-32540078)
chr5 (281-360)||(39807699-39807778)
[»] chr6 (30 HSPs)
chr6 (263-360)||(5522605-5522702)
chr6 (258-360)||(17551339-17551443)
chr6 (281-360)||(24900782-24900859)
chr6 (215-360)||(8505690-8505838)
chr6 (281-360)||(22079549-22079627)
chr6 (281-360)||(25811824-25811902)
chr6 (228-360)||(2241955-2242086)
chr6 (281-360)||(552800-552878)
chr6 (281-360)||(31883289-31883368)
chr6 (281-360)||(32459502-32459581)
chr6 (225-360)||(8645316-8645452)
chr6 (227-345)||(3772377-3772497)
chr6 (219-272)||(21418279-21418332)
chr6 (219-272)||(21467964-21468017)
chr6 (258-360)||(26595356-26595459)
chr6 (281-360)||(8098583-8098659)
chr6 (304-360)||(11635543-11635599)
chr6 (258-360)||(34047394-34047497)
chr6 (281-360)||(5080553-5080631)
chr6 (281-360)||(5694137-5694215)
chr6 (281-360)||(10335557-10335636)
chr6 (281-360)||(25127818-25127897)
chr6 (260-360)||(32316891-32316992)
chr6 (282-360)||(16337909-16337987)
chr6 (282-360)||(16368033-16368111)
chr6 (318-360)||(33712327-33712369)
chr6 (283-360)||(33430344-33430420)
chr6 (287-360)||(35077130-35077203)
chr6 (217-249)||(21418403-21418435)
chr6 (217-249)||(21468086-21468118)
[»] chr3 (57 HSPs)
chr3 (227-360)||(10811142-10811277)
chr3 (215-360)||(34456797-34456944)
chr3 (215-360)||(48346833-48346980)
chr3 (260-360)||(288732-288834)
chr3 (281-360)||(33939243-33939321)
chr3 (281-360)||(42672820-42672899)
chr3 (281-360)||(47472336-47472414)
chr3 (215-360)||(32362940-32363085)
chr3 (258-358)||(3648588-3648688)
chr3 (281-360)||(26014819-26014897)
chr3 (281-360)||(26550244-26550323)
chr3 (281-360)||(48353003-48353082)
chr3 (281-360)||(48405417-48405496)
chr3 (281-360)||(50314631-50314710)
chr3 (285-360)||(52963305-52963380)
chr3 (258-360)||(44413883-44413984)
chr3 (260-360)||(42357047-42357144)
chr3 (283-360)||(46623914-46623990)
chr3 (215-360)||(4494154-4494301)
chr3 (292-360)||(41308932-41308999)
chr3 (281-360)||(5244236-5244314)
chr3 (281-360)||(27168667-27168746)
chr3 (281-360)||(28539726-28539804)
chr3 (281-360)||(37302553-37302631)
chr3 (260-360)||(38926635-38926736)
chr3 (281-360)||(39629824-39629903)
chr3 (281-360)||(50559197-50559276)
chr3 (260-359)||(13735137-13735237)
chr3 (281-359)||(26772376-26772454)
chr3 (258-360)||(49780701-49780803)
chr3 (281-358)||(6093864-6093941)
chr3 (287-360)||(13934594-13934666)
chr3 (283-360)||(51137023-51137100)
chr3 (263-360)||(36670980-36671078)
chr3 (281-360)||(52939660-52939736)
chr3 (281-360)||(6178411-6178489)
chr3 (281-360)||(27541488-27541566)
chr3 (260-360)||(41505498-41505599)
chr3 (281-360)||(45711425-45711503)
chr3 (281-360)||(49021718-49021797)
chr3 (281-360)||(52326026-52326104)
chr3 (282-360)||(9311047-9311125)
chr3 (318-360)||(9862540-9862582)
chr3 (318-360)||(34057975-34058017)
chr3 (281-359)||(34627867-34627945)
chr3 (258-360)||(35299835-35299937)
chr3 (228-314)||(9692778-9692866)
chr3 (283-360)||(16969554-16969630)
chr3 (287-360)||(24095398-24095470)
chr3 (215-360)||(27089890-27090034)
chr3 (287-360)||(32187148-32187221)
chr3 (258-315)||(32587758-32587815)
chr3 (281-314)||(38296648-38296681)
chr3 (227-332)||(28700495-28700602)
chr3 (280-360)||(30863061-30863140)
chr3 (323-359)||(37057085-37057121)
chr3 (300-360)||(48789334-48789394)
[»] scaffold0128 (1 HSPs)
scaffold0128 (228-360)||(10943-11075)
[»] scaffold0002 (1 HSPs)
scaffold0002 (281-360)||(469623-469702)
[»] scaffold0098 (1 HSPs)
scaffold0098 (284-360)||(49302-49377)
[»] scaffold0085 (1 HSPs)
scaffold0085 (224-360)||(22780-22918)
[»] scaffold0007 (1 HSPs)
scaffold0007 (280-335)||(246692-246747)
[»] scaffold0110 (1 HSPs)
scaffold0110 (318-360)||(28349-28391)
[»] scaffold0013 (1 HSPs)
scaffold0013 (241-335)||(89991-90085)
[»] scaffold1956 (1 HSPs)
scaffold1956 (281-360)||(778-855)
[»] scaffold0432 (1 HSPs)
scaffold0432 (281-360)||(6505-6584)
[»] scaffold0199 (1 HSPs)
scaffold0199 (281-360)||(8675-8753)
[»] scaffold0184 (2 HSPs)
scaffold0184 (215-270)||(13474-13529)
scaffold0184 (281-358)||(16773-16850)
[»] scaffold0078 (2 HSPs)
scaffold0078 (215-270)||(59315-59370)
scaffold0078 (281-358)||(55994-56071)
[»] scaffold0083 (1 HSPs)
scaffold0083 (318-360)||(44788-44830)
[»] scaffold0034 (1 HSPs)
scaffold0034 (318-360)||(101928-101970)
[»] scaffold0005 (1 HSPs)
scaffold0005 (281-351)||(213834-213904)
[»] scaffold0003 (1 HSPs)
scaffold0003 (292-360)||(366301-366368)


Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 5849264 - 5849630
Alignment:
Q  1 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5849264 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatccgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaaca 5849363  T
Q  101 agtttaaaccttgttgagggaaaatgaatacacaacaccttccgttttaaa-------ataagtgtcattctaggttttcttatacatattaaagattag 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||     
T  5849364 agtttaaaccttgttgagggaaaatgaatacacaacaccttccgttttaaagattagaacaagtgtcattctaggttttcttatacatattaaagattaa 5849463  T
Q  194 agaaatgttattcgaacaacctgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaa 293  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  5849464 agaaatgttattcgaacaacctgacaacttattggacaatcaaaatatacaaagaagtttaagcattgacacaaaaaccaacgcagtagagagaaagtaa 5849563  T
Q  294 aaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  5849564 aaatataatatgaatatgagatataaagctatcacaaaagttatcaaaaaatggttgttcaaatatc 5849630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 5842554 - 5842884
Alignment:
Q  1 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5842554 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatcggttcttcctggcaagtacttggcaatttgtgcccatctgtccaaaca 5842653  T
Q  101 agtttaaaccttgttgagggaaaatgaatacacaacaccttccgttttaaaataagtgtcattctaggttttcttatacatattaaagattagagaaatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5842654 agtttaaaccttgttgagggaaaatgaatacacaacaccttccgttttaaaataagtgtcattctaggttttcttatacatattaaagattagagaaatg 5842753  T
Q  201 ttattcgaacaacctgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacata 300  Q
    ||||||||||||||||| || || ||||||||| |||||||| ||||||||||||||||||||||||||||| || |  |||||||||| |||||| |||    
T  5842754 ttattcgaacaacctgaaaacttgttggacaaccaaaatatataaagaagtttaagcattgacacaaaaaccaaaacactagagagaaaataaaaatata 5842853  T
Q  301 atatgaatatgagatgtaaagctgtcacaaa 331  Q
    |||||| ||||| || |||||||||||||||    
T  5842854 atatgagtatgaaatataaagctgtcacaaa 5842884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 5886856 - 5887021
Alignment:
Q  5 gagttttttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaa---ca- 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||||||   ||     
T  5886856 gagttttttcttcatgcttgaattccaaaagtttttcacctcattatccgttcttcctggtaagtgcttagcaatttgtgcccatctgtccaaagtccaa 5886955  T
Q  101 --agtttaaaccttgttgaggg-aaaatgaatacacaacaccttccgttttaaaataagtgtcatt 163  Q
      |||| ||| ||||||||||| ||||||| || ||    ||||||||||||||||||||||||||    
T  5886956 acagttcaaatcttgttgagggaaaaatgagtagaccgtcccttccgttttaaaataagtgtcatt 5887021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 5948201 - 5948316
Alignment:
Q  1 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtcc-aaac 99  Q
    |||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| || |||||||| | |||||| |||||||||||| ||||    
T  5948201 aaaggatttttttctttatggttgaattccaaaagttttttatctcattatctgttcttccaggtaagtgctttgcaatttgagcccatctgtccaaaac 5948300  T
Q  100 aagtttaaaccttgtt 115  Q
    |||| |||| ||||||    
T  5948301 aagtgtaaatcttgtt 5948316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 5920641 - 5920747
Alignment:
Q  12 ttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaacaagtttaaacct 111  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| || |||||||| | ||| || ||||| |||||||||||| |||||| ||    
T  5920641 ttcttcatggttgaattccaaaagtttttcacctcattatctgttcttccaggtaagtgcttcgcaatctgagcccacctgtccaaacaaatttaaatct 5920740  T
Q  112 tgttgag 118  Q
    | |||||    
T  5920741 ttttgag 5920747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5983814 - 5983911
Alignment:
Q  1 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaa 98  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| || | ||| || |||||||||||||||    
T  5983814 aaaggattttcttctttatggttgaattccaaaagtttttcacctcattatctgttcttccaggtaagtgttttgcaatctgagcccatctgtccaaa 5983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 360
Target Start/End: Complemental strand, 44061867 - 44061724
Alignment:
Q  219 aatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgagatg 316  Q
    ||||| ||||||||| ||| ||||||||||| ||||   | ||||||||||| | ||||   |||  ||||||||||||  ||||| ||| |||||||      
T  44061867 aatttgttggacaaccaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaacagaaagagaaagtaaaatgataatgtgagtatgagaga 44061768  T
Q  317 taaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
     |||| ||||||||||||||||||||||||||||||||||||||    
T  44061767 gaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatc 44061724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 5959307 - 5959393
Alignment:
Q  12 ttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgcttggtaatttgtgcccatctgtccaaa 98  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |  ||||| || | ||| || |||||||||||||||    
T  5959307 ttctttatggtagaattccaaaagtttttcacctcattatctgttcttccagttaagtgttttgcaatctgagcccatctgtccaaa 5959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 10592266 - 10592336
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgt 351  Q
    |||||||||||||||||||||||| |||||||||   |||| |||||||||||||||||||||||| ||||    
T  10592266 agagagaaagtaaaaacataatataaatatgagagagaaagttgtcacaaaagttatcaaaaaatgattgt 10592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 360
Target Start/End: Original strand, 25987718 - 25987851
Alignment:
Q  229 acaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtc 326  Q
    ||||||||| ||||||||||| |||| | | ||||||||||| | ||||  ||||||||  ||||| ||  ||||| ||| |||||||  ||||| ||||    
T  25987718 acaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagtagaatgataatgtgagtatgagagataaagttgtc 25987817  T
Q  327 acaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| | ||||||||||||||||||||||    
T  25987818 acaaaagttgtaaaaaaatggttgttcaaatatc 25987851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 7598791 - 7598715
Alignment:
Q  284 gagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||| ||| |||||||   ||||  |||||||||||| ||||||||||||||||||||||||    
T  7598791 gagaaagtaaaaacataatgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatc 7598715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 12284199 - 12284334
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggta--gagagaaagtaaaaacataatatgaatatgagatgtaaagctg 324  Q
    ||||| || |||||||||||||| | | || |||| |||||||||| || |  ||  ||||||||||||||||| ||||||| |||||||   |||| ||    
T  12284199 ggacagcttaaatatacaaagaaatatgagtattgtcacaaaaaccaaaacaataaagagagaaagtaaaaacaaaatatgagtatgagagagaaagttg 12284298  T
Q  325 tcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| ||| || |||||||||||||||||||||    
T  12284299 tcacaaacgttgtccaaaaatggttgttcaaatatc 12284334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 2730946 - 2731025
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||   |||| ||| ||||||||| ||||||| ||||||||||||||||    
T  2730946 agagagaaagtaaaaagataatgtgaatatgagagagaaagttgttacaaaagttgtcaaaaagtggttgttcaaatatc 2731025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 23754693 - 23754771
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| |||||||||| ||||||||| ||||| |   |||| ||||||||||||||| ||||||||||||||||||||||    
T  23754693 gagataaagtaaaaatataatatgagtatgaaagagaaagttgtcacaaaagttattaaaaaatggttgttcaaatatc 23754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 360
Target Start/End: Original strand, 33604999 - 33605142
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||||| | |||||||  |||||||||||||| |   || ||||||||||| ||| ||||  |||||||| |||||||||| ||| ||| |||||||    
T  33604999 tgacaatttttgggacaacctaaatatacaaagaaatg--agtattgacacaaataccaaagcaatagagagagagtaaaaacacaatgtgagtatgaga 33605096  T
Q  315 tgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
       |||  |||  |||||||||||| ||||||||||||||||||||    
T  33605097 gagaaaattgttccaaaagttatcataaaatggttgttcaaatatc 33605142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 37133850 - 37133925
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||||||||||| | |||||   |||| |||||||||||||||| ||||||||||||| ||||||    
T  37133850 agagaaagtaaaaacataatatgagtgtgagagaaaaagttgtcacaaaagttatc-aaaaatggttgttgaaatat 37133925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 10692524 - 10692446
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||  ||||| |||||||||| |||| |||||||| |||||||||||||    
T  10692524 agagagaaagtaaaaagataatgtgagtatgagagataaagttgtcacaaaaattat-aaaaaatgattgttcaaatatc 10692446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 12656008 - 12655929
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| |||||||||||||||||   |||| | | ||||||||||| | ||||||||||| ||||||||    
T  12656008 agagagaaagtaaaaatataatatgaatatgagagaaaaagttattacaaaagttattataaaatggttgtacaaatatc 12655929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 43285948 - 43286027
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||||| | ||||||||||| ||||||||    
T  43285948 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatc 43286027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 43632299 - 43632400
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||||| ||||  ||||||| |||||||||||| || ||| |||||||| |  || ||||||| ||||| ||||||||||||| | |||||    
T  43632299 attgacacaaaaaccaaagcaatagagaggaagtaaaaacatgatgtgagtatgagatat-cagttgtcacataagttgtcaaaaaatggttttacaaat 43632397  T
Q  358 atc 360  Q
    |||    
T  43632398 atc 43632400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 3547120 - 3547224
Alignment:
Q  258 attgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| |||   ||||||  |||| |||||||||||| | | |||||||  ||||| ||| ||||||||||||||||| ||||||| |||    
T  3547120 attgacacaaaaaccaaagtaatagagaaagaaaataaaaacataatgtaagtatgagagataaagttgtgacaaaagttatcaaaaagtggttgtacaa 3547219  T
Q  356 atatc 360  Q
    |||||    
T  3547220 atatc 3547224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 26026980 - 26026903
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| |||||  ||||| ||| |||||||   |||| ||||||||||||| ||||||||||||||||||||||||    
T  26026980 agagaaaataaaatgataatgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatc 26026903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 360
Target Start/End: Original strand, 10839412 - 10839546
Alignment:
Q  228 gacaactaaaatat-acaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgagatgtaaagctg 324  Q
    |||||||||||| | ||||||||  ||||  |||| |||||||||| ||||  ||||  ||||||||||||||||||| | | ||||||| |  ||| ||    
T  10839412 gacaactaaaattttacaaagaaaattaaatattggcacaaaaaccaaagcaatagatagagaaagtaaaaacataatgtaagtatgaga-gagaagttg 10839510  T
Q  325 tcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||| | ||||| ||||||||||||||||    
T  10839511 tcacaaaagttgttaaaaattggttgttcaaatatc 10839546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 4054272 - 4054350
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||||||||| |  ||||| | ||||| ||||| | ||||||||||||||||||||||    
T  4054272 agagagaaagtaaaaagataatgtgaatatgaaagataaagttatcacagaagttgt-aaaaaatggttgttcaaatatc 4054350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 21526266 - 21526345
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   ||| |||| ||||||||| | ||||| ||||||| ||||||||    
T  21526266 agagagaaagtaaaaacataatgtgagtatgagagagaaaactgttacaaaagttgttaaaaagtggttgtacaaatatc 21526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 25830231 - 25830310
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | | ||||||||||| ||||||||    
T  25830231 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatc 25830310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 27325843 - 27325765
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| || || ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  27325843 agagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 27325765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 31249510 - 31249588
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||  ||||||||||||| | ||||||||||||||||||||||    
T  31249510 agagagaaagtaaaaagataatgtgagtatgagagaaaaaattgtcacaaaagttgt-aaaaaatggttgttcaaatatc 31249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 33279534 - 33279613
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| | | |||||||  ||||| ||||||||||||| | || |||||||||| ||||||||    
T  33279534 agagagaaagtaaaaatataatgtaagtatgagagataaagttgtcacaaaagttgttaagaaatggttgtacaaatatc 33279613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 35067246 - 35067167
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | || |||||||||| ||||||||    
T  35067246 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatc 35067167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 45405617 - 45405538
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||||||||| |   |||| |||||||||| |||| ||||||||||||| || |||||    
T  45405617 agagagaaagtaaaaatataatgtgaatatgaaagaaaaagttgtcacaaaaattattaaaaaatggttgtacatatatc 45405538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 33100431 - 33100533
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| | |||   |||||||||| ||||||  |||| ||| |||||||   |||| ||||||||||||| | | |||||||||||||||||    
T  33100431 attgacacaaaaatcaaagtaatagagagaaaataaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgttataaaatggttgttcaaat 33100530  T
Q  358 atc 360  Q
    |||    
T  33100531 atc 33100533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 5601014 - 5601051
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5601014 tgtcacaaaagttgtcaaaaaatggttgttcaaatatc 5601051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 5639606 - 5639569
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5639606 tgtcacaaaagttgtcaaaaaatggttgttcaaatatc 5639569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 43397864 - 43397788
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||| ||| |||||||   |||| ||| ||||||||| | ||||||||||||||||||||||    
T  43397864 agagaaagtaaaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgt-aaaaaatggttgttcaaatatc 43397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 7271958 - 7271859
Alignment:
Q  260 tgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||||| ||||  |||||||| ||||||||  |||| ||| |||||||  ||||| ||||||||||||| |  ||||||  ||||||||||||    
T  7271958 tgacacaaaaaccaaagcaatagagagagagtaaaaaattaatgtgagtatgagagataaagttgtcacaaaagttgt-taaaaattattgttcaaatat 7271860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 37449391 - 37449489
Alignment:
Q  263 cacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||  ||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||||||||| |||||||    
T  37449391 cacaaaaaccaaagcaatagagacagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaagttgt-aaaaaatggttgttgaaatatc 37449489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 42768312 - 42768214
Alignment:
Q  260 tgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||||| ||||  ||||||||||||||||| ||||| ||| |||||||   |||| |||||| |||||| | |||||||  ||||||||||||    
T  42768312 tgacacaaaaaccaaagcaatagagagaaagtaaaaaaataatgtgagtatgagagaaaaagttgtcac-aaagttgt-aaaaaataattgttcaaatat 42768215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 6440167 - 6440088
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | || |||| ||||| ||||||||    
T  6440167 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtaaagaaatagttgtacaaatatc 6440088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 10902790 - 10902712
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| | |||||   |||| ||| |||||| ||||| |||||||||| ||||||||||    
T  10902790 agagagaaagtaaaaacataatgtgagtgtgagagagaaagttgttacaaaaattatc-aaaaatggttattcaaatatc 10902712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 22719525 - 22719447
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||  ||||||   |||  ||||||||||||| | ||||||||||||||||||||||    
T  22719525 agagagaaagtaaaaagataatgtgagcatgagagagaaaattgtcacaaaagttgt-aaaaaatggttgttcaaatatc 22719447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 39692381 - 39692302
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||  ||||| ||||||| | ||| ||| |||||||||||  |||||||    
T  39692381 agagagaaagtaaaaaaataatgtgattatgagagataaagttgtcacataggttgtcacaaaatggttgtcaaaatatc 39692302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 43715960 - 43715882
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | | ||||||||||| ||||||||    
T  43715960 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagtt-ttagaaaatggttgtacaaatatc 43715882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 1068655 - 1068613
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  1068655 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 1068613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 12898915 - 12898992
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||| |||||||||| ||||| ||| |||||||   |||| |||||||||| |||| ||||||||||| |||||||||    
T  12898915 agagataaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaatttat-aaaaaatggttattcaaatat 12898992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 13106565 - 13106484
Alignment:
Q  281 agagagaaagtaaaaacataatatg--aatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||| |||| |||  | ||||||||  |||| ||||| ||||||| || |||||||||||||||||||||    
T  13106565 agagagaaagcaaaaatataaaatgtgagtatgagatagaaagttgtcaaaaaagttgtccaaaaatggttgttcaaatatc 13106484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 14707330 - 14707408
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| |||||||||| ||||| | |||||||||   |||| | ||||||||||| ||||||||||  ||||||||||||    
T  14707330 gagataaagtaaaaaaataatgtaaatatgagaaagaaagttatcacaaaagttgtcaaaaaatgaatgttcaaatatc 14707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 33451585 - 33451627
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| |||||||||| |||||||||||||    
T  33451585 aaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatc 33451627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 34810644 - 34810705
Alignment:
Q  298 ataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||  ||||| | |||||| |||| | ||||||||||||||||||||||    
T  34810644 ataatatgaatatgagagataaagttatcacaagagttgt-aaaaaatggttgttcaaatatc 34810705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 5772003 - 5772036
Alignment:
Q  327 acaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  5772003 acaaaagttgtcaaaaaatggttgttcaaatatc 5772036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 24479279 - 24479243
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  24479279 tgtcacaaaagttatcaaaaa-tggttgttcaaatatc 24479243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 34435764 - 34435801
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  34435764 tgtcacaaaagttgtcaaaaagtggttgttcaaatatc 34435801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 4672030 - 4671998
Alignment:
Q  328 caaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||| ||||||||||||||||||||||||    
T  4672030 caaaagttgtcaaaaaatggttgttcaaatatc 4671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 6511844 - 6511924
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| |||||||||||||| | |||||||   |||| | |||||||| |||||||||| || ||||  |||||||    
T  6511844 tagagagaaaataaaaacataatataagtatgagagagaaagttatcacaaaatttatcaaaaagtgattgtataaatatc 6511924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 12734996 - 12735076
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| || ||||||||||||||||| |||||||   |||  ||||||||||||| ||| ||||||| | |||| |||||    
T  12734996 tagagataaggtaaaaacataatatgagtatgagagagaaaattgtcacaaaagttgtcataaaatggctcttcatatatc 12735076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 47448963 - 47448833
Alignment:
Q  232 actaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcaca 329  Q
    |||||||||||||||||| |||| | | || |||||||||| ||||  ||||||  ||||||||||||| ||| ||| |||||||   |||| |||||||    
T  47448963 actaaaatatacaaagaaatttaggtagtggcacaaaaaccaaagcaatagagaaagaaagtaaaaacacaatgtgagtatgagagagaaagttgtcaca 47448864  T
Q  330 aaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| ||||||||||||||||||||||||    
T  47448863 aaagttgtcaaaaaatggttgttcaaatatc 47448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 27568103 - 27568025
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||||||||||||| ||||||| | ||||| |||||||    
T  27568103 agagagaaagtaaaaacataatatgagtatgagaaataaagttgtcacaaaagttgtcaaaaagttgttgtgcaaatat 27568025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 38259172 - 38259070
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| | || |  ||||||||||||||||||||||| | | ||||| |   |||| ||||||||||||||||||||||||||||| |||||    
T  38259172 attgacacaaaaatcaaaacaatagagagaaagtaaaaacataatgttagtatgaaagagaaagttgtcacaaaagttatcaaaaaatggttgtacaaat 38259073  T
Q  358 atc 360  Q
    |||    
T  38259072 atc 38259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 41018749 - 41018670
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| ||||||||  |||| ||||||||||||| || |||||| ||||||||||||||    
T  41018749 agagagaaagtaaaaatataatgtgagtatgagatagaaagttgtcacaaaagttgtccaaaaatagttgttcaaatatc 41018670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 43159560 - 43159639
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| |||||| || ||||||||  |||| |||||||||| || | ||||||||||||||||||||||    
T  43159560 agagagaaagtaaaaatataatacgagtatgagatagaaagttgtcacaaaaattgttaaaaaatggttgttcaaatatc 43159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 44895558 - 44895636
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||  ||||||||||||  |||| ||||||||||||| | ||||||||||||||||||||||    
T  44895558 agagagaaagtaaaaagataacgtgaatatgagatagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 44895636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 31445403 - 31445326
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    |||||||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| ||||||||||||||||||||||    
T  31445403 agagagaaagtaaaaatataatgtgagtatgaaaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaata 31445326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 10700171 - 10700250
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| |||| || ||| ||||||| | |||| ||| ||||||||||||||||| ||||||| ||||||||    
T  10700171 agagagaaagtaaagacatgatgtgagtatgagaaggaaagttgttacaaaagttatcaaaaagtggttgtgcaaatatc 10700250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 24532928 - 24533007
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   |||  |||||||||| |||||| ||||| ||||||||||||||    
T  24532928 agagagaaagtaaaaacataatgtgagtatgagagaaaaaattgtcacaaaaattatcagaaaatagttgttcaaatatc 24533007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 26018126 - 26018047
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||  ||| | ||||||||||||||| | |||||| |||| ||||||||    
T  26018126 agagagaaagtaaaaatataatgtgaatatgagagataatgttgtcacaaaagttattataaaatgattgtacaaatatc 26018047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 30941471 - 30941393
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  30941471 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 30941393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 38656621 - 38656542
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| |||||||||||||||||  ||||| ||||| | ||||| ||| |||||||||||  |||||||    
T  38656621 agagagaaagtaaaaaaataatatgaatatgagagataaagttgtcaaataagttctcacaaaatggttgtcaaaatatc 38656542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 43025445 - 43025348
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaa--gtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||| ||||  ||||||||||  ||||||| ||||||||| |||||||  ||||| |||||||||| || | |||||||||||||||||||||    
T  43025445 cacaaaaaccaaagcaatagagagaaaaagtaaaaagataatatgagtatgagagataaagttgtcacaaaaattgt-aaaaaatggttgttcaaatat 43025348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 44189296 - 44189374
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| || |||||||||||| ||||||||||||||||||||||    
T  44189296 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgacacaaaagttat-aaaaaatggttgttcaaatatc 44189374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 48062142 - 48062063
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||||||| ||| |||   |||| ||| ||||||||| | |||||||| |||||||||||||    
T  48062142 agagagaaagtaaaaacataatatgagtataagagagaaagttgttacaaaagttgtaaaaaaatgattgttcaaatatc 48062063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 360
Target Start/End: Complemental strand, 34978440 - 34978303
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagc 322  Q
    ||||||||||||| ||||||||||| |||| | | || |||||||| | ||||  ||||||||  ||||||||  ||||| ||| |||||||   ||||     
T  34978440 ttggacaactaaattatacaaagaaatttaggtagtggcacaaaaaacaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaagt 34978341  T
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| || ||||||| || |||||||||||||    
T  34978340 tgtcacaaaaattgtcaaaaagtgattgttcaaatatc 34978303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 23910242 - 23910315
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| |||||||||||   ||   ||||||||||||| ||||||||||||||| ||||||||    
T  23910242 aaagtaaaaacataatgtgaatatgagagaaaatattgtcacaaaagttgtcaaaaaatggttgtacaaatatc 23910315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 12007171 - 12007250
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||  || || ||| |||||||   |||| ||||||||||||| ||||||||||||||||||||||||    
T  12007171 agagagaaagtagaatgatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatc 12007250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 360
Target Start/End: Complemental strand, 13152737 - 13152600
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaa-cctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaag 321  Q
    ||||||||||||| ||||||||||| |||| | | || |||||||| |  ||||  |  |||||||||||||||  ||||| ||| |||||||   ||||    
T  13152737 ttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaag 13152638  T
Q  322 ctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
     ||||||||||||| || |||||||||||||||||||||    
T  13152637 ttgtcacaaaagttgtc-aaaaatggttgttcaaatatc 13152600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 38340368 - 38340447
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||| ||| |||||||  ||||| ||||||||||||| | |||||||| || | ||||||||    
T  38340368 agagaaaaagtaaaaacataatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgcttttacaaatatc 38340447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 41189529 - 41189607
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| |||||||||| |||| |||||||||||||||| |||||    
T  41189529 agagagaaagtaaaaagataatgtgagtatgagaaagaaagttgtcacaaaaattat-aaaaaatggttgttcatatatc 41189607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 42552985 - 42552906
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| |||||||||||||||||||||||||| | |||| ||| |||||| || |  ||||||| |||| ||||||||    
T  42552985 agagagagagtaaaaacataatatgaatatgagagggaaagttgttacaaaaattgtataaaaatgattgtacaaatatc 42552906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 360
Target Start/End: Original strand, 32529825 - 32529918
Alignment:
Q  266 aaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| ||||  || |||||||||||||| || || |||||||||||   |||| ||| ||||||||||| ||||||| ||||||||||||||    
T  32529825 aaaaaccaaagcaataaagagaaagtaaaaagatcatctgaatatgagagagaaagttgttacaaaagttat-aaaaaatagttgttcaaatatc 32529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 33578299 - 33578373
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttca 354  Q
    ||||||||||||||||| ||||| | ||||||| |   |||| ||||| ||||||| ||||||||||||||||||    
T  33578299 tagagagaaagtaaaaatataatgtaaatatgaaaaagaaagttgtcataaaagttgtcaaaaaatggttgttca 33578373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 49128910 - 49128999
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||| ||||||||||||||| | || ||||| ||||||||| | |||| ||  |||||||||||||||||| ||| ||| |||||||    
T  49128910 ggacaaccaaaatatacaaagaaatataggcattaacacaaaaatcaaagcagtaaagagagaaagtaaaaacacaatgtgagtatgaga 49128999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 22623432 - 22623395
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22623432 tgtcgcaaaagttatcaaaaaatggttgttcaaatatc 22623395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 46260079 - 46260156
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||||| |||||||||  ||||| ||||||||||||| |   |||||||||||  |||||||    
T  46260079 agagaaagtaaaaatataatataaatatgagagataaagttgtcacaaaagttgttttaaaatggttgtataaatatc 46260156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 360
Target Start/End: Original strand, 28249487 - 28249634
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagag--aaagtaaaaacataatatgaatatga 312  Q
    |||||| || ||||||||||||| ||||||||||| |||||| | ||||||||||| | ||||   ||||||  ||| |||||  ||||| |||||||||    
T  28249487 tgacaactttttggacaactaaattatacaaagaaatttaagtagtgacacaaaaatcaaagcaaaagagagataaaataaaataataatgtgaatatga 28249586  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||   |||| | | |||||| |||| ||||| |  |||||||||||||    
T  28249587 gagaaaaagttataacaaaaattataaaaaagtaattgttcaaatatc 28249634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 33775018 - 33774946
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||| ||||||||| |   |||| ||| |||||||||||||  |||||||||| |||||||    
T  33775018 aaagtaaaaacataatgtgaatatgaaagagaaagttgtgacaaaagttatcactaaatggttgtacaaatat 33774946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 34108819 - 34108919
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| | |||| |||||||||  ||||||||||||| ||| |||||||   |||  ||||||||||||| | | ||||||||||| || ||    
T  34108819 attgacacaaaaatcaaagcagtagagaga--gtaaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatggttgtacatat 34108916  T
Q  358 atc 360  Q
    |||    
T  34108917 atc 34108919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 39497287 - 39497366
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||| |||| ||||||| | |  ||||| | ||||||| ||| | ||||||||||||| ||||||||    
T  39497287 agagagaaagtaaaaacgtaatgtgaatataaaacataaagttatcacaaaggttgttaaaaaatggttgtacaaatatc 39497366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 41650838 - 41650747
Alignment:
Q  236 aaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtca 327  Q
    ||||||||||||||   | || ||||||||||||||| || |  ||||||||||||||||||| ||| ||| |||||||   ||||||||||    
T  41650838 aaatatacaaagaaacatgagtattgacacaaaaaccaaaacaatagagagaaagtaaaaacaaaatgtgagtatgagagaaaaagctgtca 41650747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 49069335 - 49069256
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||||||||| | |||||||||   |||  | ||||||||||| ||||||| ||||||| ||||||||    
T  49069335 agagagaaaataaaaacataatgtaaatatgagagagaaaattatcacaaaagttgtcaaaaagtggttgtacaaatatc 49069256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 2008880 - 2008922
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  2008880 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 2008922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 32777729 - 32777771
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||    
T  32777729 aaagttgtcataaaagttgtcaaaaaatggttgttcaaatatc 32777771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 32803775 - 32803741
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||||||||||||||||||||| |||||||||    
T  32803775 tagagagaaagtaaaaacataatataaatatgaga 32803741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 35586795 - 35586837
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||    
T  35586795 aaagttgtcacaaaagttatcataaaatggatgttcaaatatc 35586837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 4292513 - 4292437
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    |||||||||||||||||||||| ||| ||||||| |  ||| ||||||||||||| | ||| | | ||||||||||||    
T  4292513 agagagaaagtaaaaacataatgtgagtatgaga-gagaagttgtcacaaaagttgtaaaatattagttgttcaaata 4292437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 39155111 - 39155144
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgaga 314  Q
    |||||||||||||||||||||||||| |||||||    
T  39155111 agagagaaagtaaaaacataatatgagtatgaga 39155144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 30667767 - 30667840
Alignment:
Q  285 agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||| ||||||||||| | |||  |||||||||  || ||||||| ||||||| || |||||    
T  30667767 agaaagtaaaaacataatgtgaatatgagaagaaaaaatgtcacaaa--ttgtcaaaaactggttgtacatatatc 30667840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 37899382 - 37899330
Alignment:
Q  308 tatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||  ||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  37899382 tatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatc 37899330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 38347629 - 38347549
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaa-tggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||||||| ||| |||   |||| ||||||||||  |||||||||| || |||||||||||||    
T  38347629 agagaaaaagtaaaaagataatatgagtattagagaaaaagttgtcacaaaaactatcaaaaaaatgattgttcaaatatc 38347549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 38956604 - 38956680
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| |||||| |||||| | |||||||||||||| |||||||    
T  38956604 agagagaaagtaaaaagataatgtgagtatgaga--gaaagttgtcactaaagttgt-aaaaaatggttgtttaaatatc 38956680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 46880941 - 46880909
Alignment:
Q  328 caaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||||||||||||||    
T  46880941 caaaaattatcaaaaaatggttgttcaaatatc 46880909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 9566921 - 9567025
Alignment:
Q  258 attgacacaaaaacctaagcggtagag--agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  |||||  |||||||||||||||||| ||| |||||||   |||| ||||||||||||| |||||||||||||||||||    
T  9566921 attgacacaaaaaccaaagcaatagagtgagaaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaa 9567020  T
Q  356 atatc 360  Q
    |||||    
T  9567021 atatc 9567025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 360
Target Start/End: Complemental strand, 48858967 - 48858830
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagc 322  Q
    ||||||||||||| ||||||||||| ||||   | ||||||||||| | ||||  ||||||||  ||||||||  ||||| ||| |||||||   ||||     
T  48858967 ttggacaactaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaatagagagaggaagtaaaatgataatgtgagtatgagagagaaagt 48858868  T
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  48858867 tgtcacaaaagttgtcaaaaagtggttgttcaaatatc 48858830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 8350161 - 8350260
Alignment:
Q  260 tgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||||| ||||  ||||||||||||||||| || || ||| |||||||   |||| ||||||||||||| | |||||||||||||||||||||    
T  8350161 tgacacaaaaaccaaagcaatagagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatat 8350259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 37685437 - 37685338
Alignment:
Q  260 tgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||| | ||||  ||||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||||||||||||||||    
T  37685437 tgacacaaaaatcaaagcaatagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatat 37685339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 37700081 - 37700180
Alignment:
Q  260 tgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||| | ||||  ||||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||||||||||||||||    
T  37700081 tgacacaaaaatcaaagcaatagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatat 37700179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 649877 - 649775
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||||||||||||||    
T  649877 tgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaat 649778  T
Q  358 atc 360  Q
    |||    
T  649777 atc 649775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 360
Target Start/End: Original strand, 47642525 - 47642671
Alignment:
Q  216 gacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgag 313  Q
    ||||| || ||||||||| ||| ||||||||||| ||||   | |||||||||||   ||||  ||||  |||||||||| |  ||||| ||| ||||||    
T  47642525 gacaacttgttggacaaccaaattatacaaagaaatttagatagtgacacaaaaattaaagcaatagaaagagaaagtaatatgataatgtgagtatgag 47642624  T
Q  314 atgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |   |||| ||||||||||||||||||||||||||||||||||||||    
T  47642625 agagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatc 47642671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 19947711 - 19947805
Alignment:
Q  264 acaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| ||||  |||||||||||||||| |||||| | | || ||||   |||| ||||||||||||| ||||||||||||||||||||||||    
T  19947711 acaaaaaccaaagcaatagagagaaagtaaaagcataatgtaagtaagagag--aaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatc 19947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 29359742 - 29359646
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||||||||||| ||||| ||| |||||||   |||| ||| ||||||||||| |||||||| |||||||||||||    
T  29359742 cacaaaaaccaaagcaatagagagaaagtaaaaagataatgtgagtatgagagagaaagttgttacaaaagttat-aaaaaatgattgttcaaatatc 29359646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 30570612 - 30570534
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||||||| ||| |||||||  ||||  |||||||||| |||||||||| ||||||||||| ||||    
T  30570612 tagagagaaagtaaaaacataatgtgagtatgaga--taaaattgtcacaaaatttatcaaaaagtggttgttcaactatc 30570534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 9897547 - 9897626
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| ||| | |  ||||| ||||||||||||| ||||||||||||| | ||||||||    
T  9897547 agagagaaagtaaaaacataatgtgagtattaaagataaagttgtcacaaaagttgtcaaaaaatggttctacaaatatc 9897626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 9988037 - 9987958
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| ||||||| ||||||||||||||||    
T  9988037 agagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatc 9987958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 360
Target Start/End: Original strand, 24806123 - 24806286
Alignment:
Q  197 aatgttattcgaacaacctgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaa 296  Q
    ||||||||  |||||| |||||||  | || || ||||||| |||| |||||| ||||  || ||||||||||| | ||||    |||| |||||||||     
T  24806123 aatgttatatgaacaatctgacaaccttttagataactaaattatataaagaaatttagacagtgacacaaaaatcaaagcaaacgagataaagtaaaat 24806222  T
Q  297 cataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
     ||||||||| |||||||   |||| ||||||||||||| ||||||| ||||| ||||||||||    
T  24806223 gataatatgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttattcaaatatc 24806286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 30735279 - 30735357
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  30735279 agagagaaagtaaaaaaataatgtgagtatgagagaaaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 30735357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 4213121 - 4213079
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  4213121 aaagttgtcacaaaagttatcaaaaaatggttgttcaaatatc 4213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 31088266 - 31088189
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||| ||||| ||| |||||||   |||| | ||||||||||||| |||||||||||||||||||||    
T  31088266 agagagaaagtaaaaagataatgtgagtatgagagaaaaagttatcacaaaagttat-aaaaaatggttgttcaaatat 31088189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 37985374 - 37985446
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaa 356  Q
    |||||||||||||| ||||||| |||||||||   |||| |||||||||| |||| ||||||||||||||||||    
T  37985374 agagaaagtaaaaagataatataaatatgagagtgaaagttgtcacaaaaattat-aaaaaatggttgttcaaa 37985446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 5771733 - 5771812
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||  ||||| ||| |||||||   |||| |||||||||| |||||||||| || |||||||||||||    
T  5771733 agagagaaagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatc 5771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 15470042 - 15470121
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||| ||||| ||| |||||||   |||| ||||| ||||||||| |||||||||||||| |||||||    
T  15470042 agagagaaaataaaaagataatgtgagtatgagagagaaagttgtcaaaaaagttataaaaaaatggttgttaaaatatc 15470121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 18434880 - 18434810
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgtt 352  Q
    |||||||||||||||||||||| ||||| |||||   |||| ||||||||||||| || |||||||||||||    
T  18434880 agagagaaagtaaaaacataatgtgaatgtgagagagaaagttgtcacaaaagttgtc-aaaaatggttgtt 18434810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 23645496 - 23645418
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||  ||||| ||||| ||||||| | ||||||||||||| ||||||||    
T  23645496 agagagaaagtaaaaagataatgtgagtatgagagataaagttgtcaaaaaagttgt-aaaaaatggttgtccaaatatc 23645418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 33100893 - 33100815
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||| ||||||| | ||||||||||||||||||||||    
T  33100893 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcaaaaaagttgt-aaaaaatggttgttcaaatatc 33100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 35369785 - 35369707
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| | ||| ||| ||||||||  |||| ||||||||||||| | |||||||| |||||||||||||    
T  35369785 agagagaaagtaaaaagacaatgtgagtatgagatagaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatc 35369707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 37274996 - 37275097
Alignment:
Q  260 tgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  ||||||  ||||||||||| ||||| ||| ||||| |   |||| | ||||||||||||| |||||||||||||||||||    
T  37274996 tgacacaaaaaccaaagcaatagagaaagaaagtaaaaagataatgtgagtatgaaagagaaagttatcacaaaagttat-aaaaaatggttgttcaaat 37275094  T
Q  358 atc 360  Q
    |||    
T  37275095 atc 37275097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 37619629 - 37619551
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||| ||||| ||| |||||||   |||| ||||||||||||||||| ||||||||||| ||||||||    
T  37619629 agagagaaattaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttatca-aaaatggttgtccaaatatc 37619551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 48261225 - 48261146
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| ||||| |  ||| | ||||||||||||| ||||||| ||||||| | ||||||    
T  48261225 agagagaaagtaaaaacataatgtgagtatgaaaaataaggttgtcacaaaagttgtcaaaaagtggttgtacgaatatc 48261146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 49065350 - 49065428
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| ||||| | | |||| |||||||||  || ||||||||| ||||||||||||||    
T  49065350 agagagaaagtaaaaacataatgtgagtatga-aagaaaagttgtcacaaatattgtcaaaaaatagttgttcaaatatc 49065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 49660265 - 49660186
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||  ||||| ||||||| | ||| ||| |||||||||||| |||||||    
T  49660265 agagagaaagtaaaaaaataatgtgagtatgagagataaagttgtcacataggttgtcacaaaatggttgttaaaatatc 49660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 49931639 - 49931560
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||| |||||||||||   |||| ||||||||||||| | |||||||| |||| ||||||||    
T  49931639 agagataaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatc 49931560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 48983690 - 48983732
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  48983690 aaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatc 48983732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 49020366 - 49020468
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    |||| |||||||||| || |  ||||||||||| ||||| ||||| ||| |||||||   |||  ||||||||||||| | ||||||||||||| |||||    
T  49020366 attggcacaaaaaccaaaacaatagagagaaagaaaaaatataatgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaat 49020465  T
Q  358 atc 360  Q
    |||    
T  49020466 atc 49020468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 25672425 - 25672348
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| |||||||||||||| | ||||| |  ||||| ||| |||||| |||||||||||| ||||| ||||||||    
T  25672425 agagaaaataaaaacataatataagtatgaaagataaagttgttacaaaaattatcaaaaaattgttgtacaaatatc 25672348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 31827061 - 31826957
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaag--taaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| || |  |||||||||||  ||||||||||||   | |||||||   |||| |||||||||| || | |||||||||||||||||    
T  31827061 attgacacaaaaaccaaatcaatagagagaaagggtaaaaacataatgcaagtatgagagagaaagttgtcacaaaaattgtaaaaaaatggttgttcaa 31826962  T
Q  356 atatc 360  Q
    |||||    
T  31826961 atatc 31826957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 50149056 - 50148953
Alignment:
Q  258 attgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  ||||||  ||||||||||| ||||  ||||||||| |   |||  ||||||||||||| ||||||| |||||||||||    
T  50149056 attgacacaaaaaccaaagcaatagagaaagaaagtaaaaatataag-tgaatatgaaagaaaaaattgtcacaaaagttgtcaaaaattggttgttcaa 50148958  T
Q  356 atatc 360  Q
    |||||    
T  50148957 atatc 50148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 50775118 - 50775206
Alignment:
Q  259 ttgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaat 345  Q
    |||||||||||||| ||||  ||||||||  ||||||||||||||| ||| |||||||   |||| |||||||||| || |||||||||    
T  50775118 ttgacacaaaaaccaaagcaatagagagataaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaat 50775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 30536078 - 30535998
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||| ||||| ||| |||||||   |||| |||||||||| || | |||||||| |||| ||||||||    
T  30536078 tagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaatatc 30535998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 21433386 - 21433465
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||||||||| ||| ||| |||   |||| ||||||||||||| | | ||||||||||| ||||||||    
T  21433386 agagagaaaataaaaacataatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatc 21433465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 27533470 - 27533541
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgtt 352  Q
    |||||||||||||||||||||||||| ||||| |   |||| | ||||||||||| | |||||||| |||||    
T  27533470 agagagaaagtaaaaacataatatgagtatgatagagaaagttatcacaaaagtttttaaaaaatgattgtt 27533541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 40861246 - 40861324
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||  ||||  | |||||||| |||| ||||| | ||||||||||||||    
T  40861246 agagagaaagtaaaaagataatgtgaatatgagagataaaattatcacaaaaattat-aaaaagtagttgttcaaatatc 40861324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 43775291 - 43775213
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| |||||  || |||||||   |||| |||||||||  ||||| |||||||||||||||||||||    
T  43775291 agagagaaagtaaaaagataatgcgagtatgagaaagaaagttgtcacaaacattatc-aaaaatggttgttcaaatatc 43775213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 49570082 - 49570003
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||   |||| ||||||||||||| | |  |||||| ||| ||||||||    
T  49570082 agagagaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatc 49570003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 51044735 - 51044692
Alignment:
Q  21 cttgaattccaaaagtttttcacctcattatctgttcttcctgg 64  Q
    |||||||||||||||||||| | ||||||||||||||| |||||    
T  51044735 cttgaattccaaaagttttttatctcattatctgttctccctgg 51044692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 51848965 - 51848887
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| ||| || ||||||||| |||||||| ||||| ||||| ||||||| | | ||||||||||| ||||||||    
T  51848965 agagagaaaataagaagataatatgagtatgagatataaagttgtca-aaaagttgttagaaaatggttgtacaaatatc 51848887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 52362567 - 52362489
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||| ||| |||||||   |||| ||||||||||||| ||| ||||||| ||||||||||||    
T  52362567 agagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatc 52362489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 27742666 - 27742624
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  27742666 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 27742624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 30745114 - 30744997
Alignment:
Q  241 tacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatc 338  Q
    |||||||||  ||| | ||||||||||||||| || |  ||||||||  ||||||||  ||||||||| ||||| |   |||| |||||||||||||||     
T  30745114 tacaaagaaaattatgtattgacacaaaaaccaaaacaatagagagataaagtaaaattataatatgagtatgatagagaaagttgtcacaaaagttatt 30745015  T
Q  339 aaaaaatggttgttcaaa 356  Q
    | ||||||||||| ||||    
T  30745014 agaaaatggttgtacaaa 30744997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 30766565 - 30766448
Alignment:
Q  241 tacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatc 338  Q
    |||||||||  ||| | ||||||||||||||| || |  ||||||||  ||||||||  ||||||||| ||||| |   |||| |||||||||||||||     
T  30766565 tacaaagaaaattatgtattgacacaaaaaccaaaacaatagagagataaagtaaaattataatatgagtatgatagagaaagttgtcacaaaagttatt 30766466  T
Q  339 aaaaaatggttgttcaaa 356  Q
    | ||||||||||| ||||    
T  30766465 agaaaatggttgtacaaa 30766448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 4466778 - 4466702
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||| | |||||||||   |||| ||| ||||||||| || |||| ||||||| ||||||||    
T  4466778 agagaaagtaaaaacataatgtaaatatgagacagaaagttgttacaaaagttgtc-aaaactggttgtacaaatatc 4466702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 11947879 - 11947802
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| | ||||| | | |||||||   |||| ||||||||||||| ||| ||||||||||| ||||||||    
T  11947879 agagaaagtaaatatataatgtcagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatc 11947802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 14983858 - 14983825
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgaga 314  Q
    |||||||||||||||||||||| |||||||||||    
T  14983858 agagagaaagtaaaaacataatgtgaatatgaga 14983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 15083011 - 15083114
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  ||||||||  ||||||||| ||||  | | |||||||   |||  ||||||||||||| |||||| ||||||||||||    
T  15083011 attgacacaaaaaccaaagcaatagagagagaaagtaaaaagataaagtaagtatgagagagaaaattgtcacaaaagttgtcaaaa-atggttgttcaa 15083109  T
Q  356 atatc 360  Q
    |||||    
T  15083110 atatc 15083114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 34008259 - 34008187
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||| ||| ||||||||  |||| ||||||||||||| ||| ||||| | ||||||||||||    
T  34008259 aaagtaaaaa-ataatgtgagtatgagatagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatc 34008187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 39712462 - 39712385
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||| ||||||||||   ||||| ||||||| |  |||||| |||||||||||  |||||||    
T  39712462 agagaaagtaaaaaaataatgtgaatatgagcgataaagttgtcacatagattatcacaaaatggttgtcaaaatatc 39712385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 3558933 - 3558853
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||||||| ||| |||||||   |||| | ||| ||||||| ||||||| || ||||  |||||||    
T  3558933 tagagagaaagtaaaaacataatgtgagtatgagagagaaagttatcataaaagttgtcaaaaattgattgtataaatatc 3558853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 7919066 - 7919126
Alignment:
Q  300 aatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| |||||||   |||| |||||| |||||||||||||| || |||||||||||||    
T  7919066 aatatgagtatgagagagaaagttgtcacgaaagttatcaaaaattgattgttcaaatatc 7919126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 9882652 - 9882723
Alignment:
Q  288 aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| ||||||||||||||||||||  ||||| ||||| ||| ||| ||| ||||| ||||| ||||||||    
T  9882652 aagtaagaacataatatgaatatgagagataaagttgtca-aaatgttgtcacaaaatagttgtacaaatatc 9882723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 27465023 - 27465121
Alignment:
Q  263 cacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||  ||||||||| || || ||| |||||||   |||| ||||||||||||| | |||||||||||||| |||||||    
T  27465023 cacaaaaaccaaagcaatagagagacaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgtttaaatatc 27465121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 40680872 - 40680808
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaa 344  Q
    ||||||||| ||||||||||||| ||| |||||||  ||||| ||||| |||| || ||||||||    
T  40680872 tagagagaaggtaaaaacataatgtgagtatgagaaataaagttgtcataaaaattgtcaaaaaa 40680808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 41062797 - 41062765
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagat 315  Q
    |||||||||||||| ||||||||||||||||||    
T  41062797 agagaaagtaaaaatataatatgaatatgagat 41062765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 47721494 - 47721431
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaat 345  Q
    ||||| |||||||||| ||||| |||||||||||   |||| ||||||||||||| |||||||||    
T  47721494 agagataaagtaaaaa-ataatgtgaatatgagacagaaagttgtcacaaaagttgtcaaaaaat 47721431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 47728486 - 47728423
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaat 345  Q
    ||||| |||||||||| ||||| |||||||||||   |||| ||||||||||||| |||||||||    
T  47728486 agagataaagtaaaaa-ataatgtgaatatgagacagaaagttgtcacaaaagttgtcaaaaaat 47728423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 52437574 - 52437510
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgt 351  Q
    |||||||||| ||||| ||| |||||||   |||| |||||||||| |||| |||||||||||||    
T  52437574 aaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgt 52437510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42788739 - 42788811
Alignment:
Q  1 aaaggagttttttctttatgcttgaattccaaaagtttttcacctcattatctgttcttcctggcaagtgctt 73  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  42788739 aaagtagtttcttctttatgcttgaattccaaaagttcttcacctcattatctgttcttcctggtaaatgctt 42788811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 38911915 - 38911994
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||||||||||||| |  ||||| ||||||||||  ||||||||||||||||||||||||||    
T  38911915 agagaaaaagtaaaaacataatatgaatatgaaagataaagttgtcacaaaaaatatcaaaaaatggttgttcaaatatc 38911994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 1907749 - 1907827
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||||||||||| |||||||||  ||||| |||||||||| |||| ||||||| ||||| |||||||    
T  1907749 agagagaaagtaaaaacataatataaatatgagagataaagttgtcacaaaaattattaaaaaatagttgtacaaatat 1907827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 6336356 - 6336259
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||| |||||||||| |||||| ||||||||| |||||||   |||| ||||||||||||| | | ||||||||||| ||||||||    
T  6336356 cacaaaaaccaaagcgatagagagaaaataaaaatataatatgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatc 6336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 38821506 - 38821373
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtc 326  Q
    |||||||  |||||||||||||| | | || |||| |||||| ||| ||||  ||||||||| ||||||||| ||| ||| |||||||   |||  ||||    
T  38821506 ggacaacctaaatatacaaagaaatatgagtattggcacaaataccaaagcaatagagagaaggtaaaaacacaatgtgagtatgagaaagaaaattgtc 38821407  T
Q  327 acaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| ||| ||||||||||||||||||||    
T  38821406 acaaaagttgtcataaaatggttgttcaaatatc 38821373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 24766238 - 24766159
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||| ||  ||||| ||||||||||||||| ||||||||||||| ||||||||    
T  24766238 agagagaaagtaaaaatataatgtgagtatgcgagataaagttgtcacaaaagttattaaaaaatggttgtacaaatatc 24766159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 7502415 - 7502492
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||| |||||| |||||||   |||| |||||||||| || ||||||||||||||| ||||||||    
T  7502415 agagaaagtaaaaacattatatgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatc 7502492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 18254195 - 18254273
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  18254195 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 18254273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 27490716 - 27490794
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||||||||||||| | |||||   |||| ||||||||||||| || |||||||||||||||||||||    
T  27490716 agagagaaattaaaaacataatatgagtgtgagagagaaagttgtcacaaaagttgtc-aaaaatggttgttcaaatatc 27490794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 360
Target Start/End: Original strand, 36587398 - 36587532
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctg 324  Q
    ||||||||||||| ||||||||||| ||||   | || |||||||| | ||||  |||||||| |||||||  ||||| ||| |||||||   |||| ||    
T  36587398 ttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagagtaaaatgataatgtgagtatgagagagaaagttg 36587497  T
Q  325 tcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||| |||| || ||||||||||||||||||||||||    
T  36587498 tcaaaaaa-ttgtcaaaaaatggttgttcaaatatc 36587532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 21611626 - 21611723
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||| | ||||  ||||||||||||||||| |||||||||||||||||   |||| | |||| |||||| | ||||||||||| || |||||||    
T  21611626 cacaaaaatcaaagcaatagagagaaagtaaaaagataatatgaatatgagaaagaaagttatcactaaagttgtaaaaaaatggttcttaaaatatc 21611723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 8848680 - 8848759
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||| || ||| | |||||   |||| ||||||||||||| || |||||||||||||||||||||    
T  8848680 tagagagaaagtaaaaacatgatgtgagtgtgagagagaaagttgtcacaaaagttgtc-aaaaatggttgttcaaatatc 8848759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 44239190 - 44239118
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga 287  Q
    ||||||||| ||||||||||||| ||||||||||| |||| ||| ||||||||||| | ||||  ||||||||    
T  44239190 tgacaattttttggacaactaaattatacaaagaaatttaggcagtgacacaaaaatcaaagcaatagagaga 44239118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 2144852 - 2144726
Alignment:
Q  236 aaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaag 333  Q
    |||||||||||||| | | || |||| |||||||||| ||||  ||||||||  || |||||||| ||| ||| |||| ||   |||| | ||||||| |    
T  2144852 aaatatacaaagaaatatgagtattggcacaaaaaccaaagcaatagagagataaattaaaaacaaaatgtgagtatgggagagaaagttatcacaaacg 2144753  T
Q  334 ttatcaaaaaatggttgttcaaatatc 360  Q
    || ||||||||||||||||||||||||    
T  2144752 ttgtcaaaaaatggttgttcaaatatc 2144726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 9207675 - 9207597
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||| |||||||||||||    
T  9207675 agagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatc 9207597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 13766295 - 13766373
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||||| | ||||| |   |||| ||||||||||||||| |||||||||||||  |||||||    
T  13766295 agagagaaagtaaaaacataatataagtatgaaagaaaaagttgtcacaaaagttat-aaaaaatggttgtataaatatc 13766373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 29349591 - 29349513
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| || ||||||||||||| ||||| |||||   |||| |||||||||||| ||| |||||||||||||||||||||    
T  29349591 agagaaaaggtaaaaacataatgtgaatgtgagagagaaagttgtcacaaaagtgatc-aaaaatggttgttcaaatatc 29349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 41042339 - 41042261
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| |  |||||||||||||||||||||    
T  41042339 agagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaagttgt-taaaaatggttgttcaaatatc 41042261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 43487487 - 43487386
Alignment:
Q  260 tgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  ||||||  ||||||||||| ||||| |||  ||||||   |||| |||||||||| |||| |||||||||||||||||||    
T  43487487 tgacacaaaaaccaaagcaatagagaaagaaagtaaaaaaataatgtgagcatgagagagaaagttgtcacaaaaattat-aaaaaatggttgttcaaat 43487389  T
Q  358 atc 360  Q
    |||    
T  43487388 atc 43487386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 14871896 - 14871854
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  14871896 aaagctgtcacaaaagttgtcaaaaaatggttgttcacatatc 14871854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 7367956 - 7367875
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagtta-tcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||| ||| ||| |||||||  ||||| |||||  ||||||| | |||||||||||||| |||||||    
T  7367956 tagagagaaagtaaaaacacaatgtgagtatgagagataaagttgtcattaaagttattaaaaaaatggttgttgaaatatc 7367875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 30339861 - 30339933
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||| ||| ||||| || ||||| ||||| |||||||||||||||||| |||| ||||||||    
T  30339861 aaagtaaaaacaaaatgtgagtatgaaatataaagttgtca-aaaagttatcaaaaaatgattgtacaaatatc 30339933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 9760103 - 9760024
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcac-aaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| |||||| ||||||| | ||||||||||||||||||||||    
T  9760103 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaaagttgt-aaaaaatggttgttcaaatatc 9760024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 31578588 - 31578441
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagag--aaagtaaaaacataatatgaatatga 312  Q
    |||||| || ||||||||||||  ||||||||||| |||| | | ||||||||||| | ||||  |||||||  |||||||||  ||||| ||| |||||    
T  31578588 tgacaacttgttggacaactaacttatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagtaaaagaataatgtgagtatga 31578489  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||   |||| ||||||||||  | || |||||| ||| ||||||||||    
T  31578488 gagaaaaagttgtcacaaaaactgtctaaaaatagttattcaaatatc 31578441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 39234212 - 39234244
Alignment:
Q  328 caaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||||||||||||||    
T  39234212 caaaagttatcaaaaaatggttgttcaaatatc 39234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 3104570 - 3104519
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaa 332  Q
    |||||||||||| ||| |||||||||||||||||  ||||| ||||||||||    
T  3104570 agagagaaagtacaaaaataatatgaatatgagagataaagttgtcacaaaa 3104519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 6511359 - 6511258
Alignment:
Q  260 tgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  ||||  |||||| |||||| ||||| ||| |||||||   |||| |||||| |||||| | |||||||||||||||||||    
T  6511359 tgacacaaaaaccaaagcaatagaaagagaaaataaaaagataatgtgagtatgagagagaaagttgtcactaaagttgt-aaaaaatggttgttcaaat 6511261  T
Q  358 atc 360  Q
    |||    
T  6511260 atc 6511258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 12784384 - 12784463
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||  ||| |||||||   |||| |||||||||| |||| | ||||||||||| ||||||||    
T  12784384 agagagaaagtaaaaatataacgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatc 12784463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 18737863 - 18737938
Alignment:
Q  285 agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||||| |||||||||||   |||| ||||||||||||| | ||||||||| | | ||||||||    
T  18737863 agaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatggatatacaaatatc 18737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 335
Target Start/End: Complemental strand, 31548441 - 31548342
Alignment:
Q  236 aaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaag 333  Q
    |||||||||||||| | | || ||||| |||||| || ||||  |  |||||||||||||||||||||||| |||||||||   |||| |||||||||||    
T  31548441 aaatatacaaagaaatatgagtattgatacaaaatccaaagcaatagagagagaaagtaaaaacataatataaatatgaga--gaaagttgtcacaaaag 31548344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 44050097 - 44050022
Alignment:
Q  285 agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||| ||| |||||||   || | ||||||||||||| ||| ||||||||||| ||| ||||    
T  44050097 agaaagtaaaaacataatgtgagtatgagagagaaggttgtcacaaaagttgtcataaaatggttgtacaagtatc 44050022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 1079053 - 1079095
Alignment:
Q  228 gacaactaaaatatacaaagaagtttaagcattgacacaaaaa 270  Q
    |||||||||| ||||||||||| |||||||| |||||||||||    
T  1079053 gacaactaaattatacaaagaaatttaagcagtgacacaaaaa 1079095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 11965842 - 11965800
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||| ||||||| || |||||||||||||    
T  11965842 aaagctgtcacaaaagttgtcaaaaagtgattgttcaaatatc 11965800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 38874602 - 38874679
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||| ||||||||||||||| ||||    |||  |||||||||||||||  ||||||||||||| |||||||    
T  38874602 gagagaaagtataaacataatatgaatttgagggagaaaattgtcacaaaagttat-taaaaatggttgtttaaatatc 38874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 44977460 - 44977565
Alignment:
Q  258 attgacacaaaaacctaagcggtagag--agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaa-atggttgttca 354  Q
    ||||||||||||||| ||||  |||||  |||||||||||||||||| | |||||||||   |||  ||| ||||||||| ||||||| ||||||||  |    
T  44977460 attgacacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtaaatatgagagagaaaattgttacaaaagttgtcaaaaagatggttgtata 44977559  T
Q  355 aatatc 360  Q
    ||||||    
T  44977560 aatatc 44977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 19642712 - 19642620
Alignment:
Q  254 aagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaa 344  Q
    ||||||||||||||||| | ||||  ||||||||  |||| |||||||||| ||| ||| ||||  |||  ||||||||||||| ||||||||    
T  19642712 aagcattgacacaaaaatcaaagcaatagagagagaaagtgaaaacataatgtgagtataagataaaaatttgtcacaaaagttgtcaaaaaa 19642620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 33616551 - 33616518
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgaga 314  Q
    |||||||||||||||| |||||||||||||||||    
T  33616551 agagagaaagtaaaaatataatatgaatatgaga 33616518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 37731227 - 37731264
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  37731227 tgtcacaaaagttgtcaaaaagtggttgttcaaatatc 37731264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 39147849 - 39147772
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||| ||||||||| |   |||| ||| ||||||||| | ||||||| ||||| ||| ||||    
T  39147849 agagaaagtaaaaacataatgtgaatatgaaagagaaagttgttacaaaagttgtaaaaaaatagttgtacaagtatc 39147772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 9634421 - 9634500
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| ||||||||||  |||| ||| |||||||   |||| |||||||||| |||||| ||||||| ||||||||||||    
T  9634421 tagagataaagtaaaaag-taatgtgagtatgagagaaaaagttgtcacaaaaattatcataaaatggatgttcaaatatc 9634500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 14233685 - 14233783
Alignment:
Q  263 cacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||  |||||||||  |||||||| |||||||   |||  ||||||||||||| ||| ||||||| ||||||||||||    
T  14233685 cacaaaaaccaaagcaatagagagataaagtaaaaag-taatatgagtatgagagagaaatttgtcacaaaagttgtcacaaaatggatgttcaaatatc 14233783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 22525979 - 22526058
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| |||||||||| ||||| ||||||| | |   |||| |||||||||| || ||||||||||| ||||||||||||    
T  22525979 tagagataaagtaaaaa-ataatgtgaatataaaagagaaagttgtcacaaaaattgtcaaaaaatggatgttcaaatatc 22526058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 37316837 - 37316877
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  37316837 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaata 37316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 42532724 - 42532792
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggtt 349  Q
    ||||| |||||||||| ||||| ||| |||||||   |||| ||||||||||||||| | |||||||||    
T  42532724 agagataaagtaaaaatataatgtgagtatgagaaagaaagttgtcacaaaagttattataaaatggtt 42532792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 44059655 - 44059619
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||||  ||||||||||||||||||    
T  44059655 tgtcacaaaagttatcatcaaatggttgttcaaatat 44059619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 220 - 360
Target Start/End: Original strand, 149407 - 149549
Alignment:
Q  220 atttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgt 317  Q
    |||| ||||||||||||||||||||||||| |||| | | ||||||||||||  ||||  |  |||||||||||  ||||||||| ||| |||||||       
T  149407 atttgttggacaactaaaatatacaaagaaatttaggtagtgacacaaaaactaaagcaatagagagagaaagttgaaacataatgtgagtatgagagag 149506  T
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| |||||||||| |||||||||| || |||||||||||||    
T  149507 aaagttgtcacaaaaattatcaaaaagtgattgttcaaatatc 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 358
Target Start/End: Complemental strand, 37060426 - 37060326
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||| || |||| ||||  ||||||||| ||||||| ||||| |||||||||||   |||| ||||||||||||| |||||||||||||||||||||    
T  37060426 attgacataagaaccaaagcaatagagagaaggtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 37060327  T
Q  358 a 358  Q
    |    
T  37060326 a 37060326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 51577758 - 51577622
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagc 322  Q
    ||||||||||||| |||| |||||| |||| | | || |||||||| | ||||  ||||||||  ||||||||  ||||||||| |||||||   ||||     
T  51577758 ttggacaactaaattatataaagaaatttaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaatgataatatgagtatgagagagaaagt 51577659  T
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||||||||||||| || ||||||||||||    
T  51577658 tgtcacaaaagttatcaaaaagtgattgttcaaatat 51577622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 50721705 - 50721809
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| |||| |||||||||  ||||||||| ||||| ||| ||||| |   |||| | ||||||||||| ||||||| |||||||||||    
T  50721705 attgacacaaaaaccaaagcagtagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttatcacaaaagttgtcaaaaattggttgttcaa 50721804  T
Q  356 atatc 360  Q
    |||||    
T  50721805 atatc 50721809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 21392657 - 21392577
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| |||||||||||||||||| ||||||| |   ||||||||||||||| |||| | |||||| |||||||||||||    
T  21392657 tagagataaagtaaaaacataatataaatatgaaagagaaagctgtcacaaaaattattacaaaatgattgttcaaatatc 21392577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 39158259 - 39158112
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatga 312  Q
    |||||| |||||||||||| ||| ||||||||||| |||| | |  | |||||||||| || |  ||||  ||||||||| ||  ||||| ||| |||||    
T  39158259 tgacaacttattggacaaccaaattatacaaagaaatttaggtagcggcacaaaaaccaaaacaatagaaagagaaagtagaagaataatgtgagtatga 39158160  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||   |||| |||||||||| ||||||||||||| |||||||||||||    
T  39158159 gagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatc 39158112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 360
Target Start/End: Original strand, 5932683 - 5932828
Alignment:
Q  217 acaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||| |||||||| |||| ||||||||||| |||| | | ||||||||||| | || |  ||||  |||| | |||||  ||||| ||| |||||||    
T  5932683 acaattttttggacaattaaattatacaaagaaatttaggtagtgacacaaaaatcaaaacaatagatagagacactaaaaggataatgtgagtatgaga 5932782  T
Q  315 tgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
       |||| ||||||||||||| ||||||| ||||||||||||||||    
T  5932783 gagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 5932828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 24045353 - 24045251
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| | ||||  ||||||||||||||||||||||| ||| |||||||   || | |||| |||||||| | ||||| ||||||| |||||    
T  24045353 attgacacaaaaatcaaagcaatagagagaaagtaaaaacataatgtgagtatgagagagaaggttgtcgcaaaagttgtaaaaaattggttgtgcaaat 24045254  T
Q  358 atc 360  Q
    |||    
T  24045253 atc 24045251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 44539839 - 44539743
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  |||||||||| |||||| ||||||| | |||||||   |||| | |||||||| |||| ||||||||||||||||||||||    
T  44539839 cacaaaaaccaaagcaatagagagaaaataaaaagataatataagtatgagagagaaagttatcacaaaaattat-aaaaaatggttgttcaaatatc 44539743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 46634183 - 46634107
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||| ||| |||||||  ||||| ||||||||||||| | |||||||| |||||||||||||    
T  46634183 agagaaagtaaaaagataatgtgagtatgagagataaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatc 46634107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 56557873 - 56557740
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtc 326  Q
    |||||||  ||||||| |||||| | | || |||| |||||| ||| ||||  ||||||||| ||||||||| ||| ||| |||||||   |||  ||||    
T  56557873 ggacaacctaaatatagaaagaaatatgagtattggcacaaataccaaagcaatagagagaaggtaaaaacacaatgtgagtatgagagagaaaattgtc 56557774  T
Q  327 acaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| ||| ||||| ||||||||||||||    
T  56557773 acaaaagttgtcataaaattgttgttcaaatatc 56557740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 9362665 - 9362742
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||||||||||  |||||||||||||||||  |||| ||||||||||||| |||  |||||| ||||||||||||    
T  9362665 agagataaagtaaaaa--taatatgaatatgagatagaaagttgtcacaaaagttgtcattaaatggatgttcaaatatc 9362742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 37997339 - 37997263
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  37997339 agagagaaagtaaaaagataatgtgagtatgagag--aaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 37997263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 53801720 - 53801815
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttca 354  Q
    ||||||||||||||  ||||  ||||||||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| | ||||||||||||||||    
T  53801720 attgacacaaaaactaaagcaatagagagaaagtaaaaagataatgtgagtatgaaaaaaaaagttgtcacaaaagttgt-aaaaaatggttgttca 53801815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 2738253 - 2738332
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||| ||||| |||||||||||   |||| | |||||||| || |||||||||| |||||||||||||    
T  2738253 agagagaaagtagaaagataatgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatgattgttcaaatatc 2738332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 5249954 - 5249875
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   |||| ||||||||| ||| ||| ||||||||||  ||||||||    
T  5249954 agagagaaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaatgttgtcataaaatggttgcacaaatatc 5249875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 10250501 - 10250579
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||| ||||||||||||||    
T  10250501 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatagttgttcaaatatc 10250579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 14443284 - 14443205
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||  ||||||| | |||||||   |||  ||||||||||||| |||||||||| |||||||||||||    
T  14443284 agagagaaagtaaaataataatataagtatgagagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaatatc 14443205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 26910287 - 26910210
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| |||||||||||| ||||   |||| ||||||||||||| | ||||||||||| ||||||||||    
T  26910287 agagagaaagtaaaaaaataatatgaatacgagagagaaagttgtcacaaaagttgt-aaaaaatggtt-ttcaaatatc 26910210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 27354340 - 27354418
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||| ||| |||||||  ||||| | ||| |||||||||| ||||||| |||||||||||||    
T  27354340 agagaaaaagtaaaaacataatgtgagtatgagagataaagttatcataaaagttatc-aaaaatgattgttcaaatatc 27354418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 37297157 - 37297056
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||  ||||||||||||| | |||||||||||||||||||    
T  37297157 tgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgt-aaaaaatggttgttcaaat 37297059  T
Q  358 atc 360  Q
    |||    
T  37297058 atc 37297056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 43175092 - 43174991
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||| | ||||||||||| | |||||||||||||||||||    
T  43175092 tgacacaaaaaccaaagccatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttatcacaaaagttgt-aaaaaatggttgttcaaat 43174994  T
Q  358 atc 360  Q
    |||    
T  43174993 atc 43174991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 50831741 - 50831820
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| |||| || ||| ||||||| | |||| ||| ||||||||| ||||||| ||||||| ||||||||    
T  50831741 agagagaaagtaaagacatgatgtgagtatgagagggaaagttgttacaaaagttgtcaaaaagtggttgtacaaatatc 50831820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 51255832 - 51255753
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||  || || ||| |||||||   |||| ||||||||||||| ||||||||||||||||||||||||    
T  51255832 agagagaaagtagaataatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatc 51255753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 2575751 - 2575853
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||| ||||| ||||  |||||||||||||| |||||||||||| |||| ||   |||| |||| |||||  | |||||||||  ||||||||||    
T  2575751 attgacacacaaaccaaagcaatagagagaaagtaacaacataatatgagtatgtgagagaaagttgtcgcaaaaactgtcaaaaaataattgttcaaat 2575850  T
Q  358 atc 360  Q
    |||    
T  2575851 atc 2575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 29175335 - 29175234
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||||| ||||   |||||||||||||||| ||||| ||| |||||||   |||| |||||||||| || | |||||||| ||||||| ||    
T  29175335 attgacacaaaaaccaaagcaagagagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaaattgt-aaaaaatgattgttcatat 29175237  T
Q  358 atc 360  Q
    |||    
T  29175236 atc 29175234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 42853687 - 42853583
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  ||||||||  |||| |||||||||||||| ||| |||  ||||  ||| ||||||||| | |||||||  ||||||||    
T  42853687 attgacacaaaaaccaaagcaatagagagagaaagtgaaaacataatatgagtataagagataaaattgttacaaaagttgtaaaaaaattattgttcaa 42853588  T
Q  356 atatc 360  Q
    |||||    
T  42853587 atatc 42853583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 5622563 - 5622465
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaa--gtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||||  ||||||| ||||| ||| ||||| |   |||| ||||||||||||| | ||||||||||||||||||||||    
T  5622563 cacaaaaaccaaagcaatagagagaaaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 5622465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 11068773 - 11068697
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||   |||| ||||| ||||||| | |||||||| |||||||||||||    
T  11068773 agagagaaagtaaaaagataatgtgaatatgaga--gaaagttgtcaaaaaagttgt-aaaaaatgattgttcaaatatc 11068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 15175625 - 15175554
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||| ||||||||| || ||||   |||  ||||||||||||||||| |||||||||||||||||||    
T  15175625 aaagtaaaaagataatatgagtacgagagagaaatatgtcacaaaagttatca-aaaatggttgttcaaatat 15175554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 23369298 - 23369396
Alignment:
Q  263 cacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||  ||||||||| ||||| ||| || ||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  23369298 cacaaaaaccaaagcaatagagagataaagtaaaaagataatgtgagtaagagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 23369396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 26908068 - 26908146
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||| |||||||||||||||||   |||  |||||||||| |||| |||||||  |||||||||||||    
T  26908068 tagagagaaagtaaaaatataatatgaatatgagaaagaaaattgtcacaaaaattat-aaaaaat-attgttcaaatatc 26908146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 38519947 - 38519800
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatga 312  Q
    |||||| || ||||||||| ||| | ||||||||| |||||  | || |||||||| | ||||  ||||||||  ||||| ||  || || ||| |||||    
T  38519947 tgacaacttgttggacaaccaaattttacaaagaaatttaaatagtggcacaaaaatcaaagcaatagagagagaaagtagaataatcatgtgagtatga 38519848  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||   |||| |||||||||| || ||||||||||||||||||||||||    
T  38519847 gagagaaagttgtcacaaaaattgtcaaaaaatggttgttcaaatatc 38519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 1795967 - 1796046
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||| ||| |||||||  ||||| | ||||||||||| | ||||||| ||||| ||||||||    
T  1795967 agagataaagtaaaaatataatgtgagtatgagagataaagttatcacaaaagttgttaaaaaattgttgtacaaatatc 1796046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 2401696 - 2401617
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| | |||| || || ||| |||||||  ||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  2401696 agagagaaaatgaaaatatgatgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatc 2401617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 6520816 - 6520875
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatca 339  Q
    ||||||||||||||||||||||| ||| |||||||   |||| ||| |||||||||||||    
T  6520816 tagagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttatca 6520875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 26732310 - 26732232
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||| ||||| ||| |||||||  ||||| |||||| |||||| | ||||| ||||||||||||||||    
T  26732310 agagagaaaataaaaagataatgtgagtatgagagataaagttgtcactaaagttgtgaaaaa-tggttgttcaaatatc 26732232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 31995905 - 31995980
Alignment:
Q  285 agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| |||||||||||| ||||||| |  ||||  | |||||||| |||||||||||| ||||| ||||||||    
T  31995905 agaaagttaaaacataatataaatatgaaagataaaattatcacaaaatttatcaaaaaatagttgtacaaatatc 31995980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 32130265 - 32130300
Alignment:
Q  325 tcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||| |||||||||||||||||||||||||||    
T  32130265 tcacaaaaattatcaaaaaatggttgttcaaatatc 32130300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 39478516 - 39478442
Alignment:
Q  285 agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||||||||| |||||||   |||| ||||||||||||| | ||||||| |||||||| |||||    
T  39478516 agaaagtaaaaaaataatatgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatagttgttcatatatc 39478442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 40348902 - 40348801
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||  |||||||||| |||| |||||||| ||||||||||    
T  40348902 tgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaaattat-aaaaaatgattgttcaaat 40348804  T
Q  358 atc 360  Q
    |||    
T  40348803 atc 40348801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 52895313 - 52895234
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||| |||||||||||| ||| |||||||  ||||| |||||||||| || |||  |||||||||| ||||||||    
T  52895313 agagataaaataaaaacataatgtgattatgagagataaagttgtcacaaaaattgtcatgaaatggttgtacaaatatc 52895234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 53654736 - 53654814
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||||||||||||| |   |||| |||||||||| |||||| ||||| | ||||||||||||    
T  53654736 agagataaagtaaaaa-ataatatgaatatgaaagagaaagttgtcacaaaaattatcataaaatagatgttcaaatatc 53654814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 14603544 - 14603474
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgt 351  Q
    |||||||||||||||  ||||||| ||||||||||  |||| |||||| ||| |||||| ||| |||||||    
T  14603544 agagagaaagtaaaacaataatataaatatgagataaaaagttgtcactaaaattatcataaattggttgt 14603474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 32012945 - 32012903
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  32012945 aaagttgtcacaaaagttgtcaaaaattggttgttcaaatatc 32012903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 360
Target Start/End: Complemental strand, 54000842 - 54000705
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagc 322  Q
    ||||||||||||| ||||||||||| |||| | | || |||| |||  |||||  |  |||||||||||||||  ||||| ||| |||||||   ||||     
T  54000842 ttggacaactaaattatacaaagaaatttaggtagtggcacacaaatttaagcaatagagagagaaagtaaaatgataatgtgagtatgagagagaaagt 54000743  T
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||| | |||| || ||||||| ||||||||||||||||    
T  54000742 tgttataaaaattgtcaaaaagtggttgttcaaatatc 54000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 56271409 - 56271367
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||    
T  56271409 aaagttgtcacaaaagttatcataaaatggatgttcaaatatc 56271367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 6494885 - 6494957
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| |||||||||||||||||   |||| |||||||| | ||||||  |||||| ||||||||||||    
T  6494885 aaagtaaaaa-ataatatgaatatgagagagaaagttgtcacaataattatcaccaaatggatgttcaaatatc 6494957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 11546886 - 11546919
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgaga 314  Q
    |||||||||||||||| |||||||||||||||||    
T  11546886 agagagaaagtaaaaatataatatgaatatgaga 11546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 20381436 - 20381359
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||||||||| ||| |||  ||||||   |||| ||| | |||| ||||||||||||| ||||||||||||    
T  20381436 gagagaaagtaaaaacacaatgtgagcatgagagagaaagttgttataaaaattatcaaaaaatgattgttcaaatat 20381359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 21014098 - 21014061
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  21014098 tgtcacaaaagttgtcaaaaaatgattgttcaaatatc 21014061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 50783102 - 50783050
Alignment:
Q  217 acaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaa 270  Q
    |||| |||||| ||||||||||||||||||||| ||| || |||||||||||||    
T  50783102 acaacttattgaacaactaaaatatacaaagaaattt-aggattgacacaaaaa 50783050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 51986125 - 51986049
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||| ||| |||||||   |||| ||||| ||||||||| |||||||  |||||||||||||    
T  51986125 agagaaagtaaaaagataatgtgagtatgagagagaaagttgtcataaaagttat-aaaaaataattgttcaaatatc 51986049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 26492112 - 26492040
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagtt 335  Q
    |||||||||| ||||  |||||||||  |||||| ||||| |||||||||||  ||||| || ||||||||||    
T  26492112 cacaaaaaccaaagcaatagagagaagataaaaagataatctgaatatgagagataaagttgccacaaaagtt 26492040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 35897780 - 35897709
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||||||||||||||  | |||  ||||||||| ||| | ||||||| ||||| |||||||    
T  35897780 aaagtaaaaacataatatgaatatgaggag-aaaattgtcacaaatgttttgaaaaaatagttgtacaaatat 35897709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 50506432 - 50506400
Alignment:
Q  328 caaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||||||||||||||    
T  50506432 caaaaattatcaaaaaatggttgttcaaatatc 50506400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 360
Target Start/End: Original strand, 17097719 - 17097866
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatga 312  Q
    ||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||||| | |||   ||||  ||||||||| ||  | ||| ||| |||||    
T  17097719 tgacaatttgttggacaactaaattatacaaagaaaattaggtagtgacacaaaaatcaaagtaatagaaagagaaagtagaatgacaatgtgagtatga 17097818  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||  |||  ||||||||||||||||||||||||||||||||||||||    
T  17097819 gatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatc 17097866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 360
Target Start/End: Original strand, 36562971 - 36563115
Alignment:
Q  216 gacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgag 313  Q
    ||||| || ||||||||| ||| || |||||||| || | | ||||||||||||||||||||  |  |||||||||||||||||| ||| |||||||||     
T  36562971 gacaacttgttggacaaccaaactacacaaagaaattaaggtattgacacaaaaacctaagcaatagagagagaaagtaaaaaca-aatgtgaatatgaa 36563069  T
Q  314 atgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |  | ||| |||||||||| ||||||||||| |||||||||||||||    
T  36563070 agattaagttgtcacaaaaattatcaaaaaa-ggttgttcaaatatc 36563115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 19844271 - 19844373
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    |||| |||| ||||| ||||  ||||||||||||||||||||||| || ||||||||   |||| | ||||||||||||||||||||| ||||| |||||    
T  19844271 attggcacacaaaccaaagcaatagagagaaagtaaaaacataatgtggatatgagagagaaagttatcacaaaagttatcaaaaaatagttgtacaaat 19844370  T
Q  358 atc 360  Q
    |||    
T  19844371 atc 19844373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 13309968 - 13309889
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| |||||||||||   |||| | |||||||| || ||||||||| ||||||||||||||    
T  13309968 agagagaaagtaaaaacataatgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatagttgttcaaatatc 13309889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 360
Target Start/End: Complemental strand, 612005 - 611871
Alignment:
Q  228 gacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgt 325  Q
    |||||||||| ||||||||||| |||| | | ||||||||||| | |||| |||||||||  || |||||  ||||| ||| |||||||   |||| |||    
T  612005 gacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcagtagagagagaaaataaaatgataatgtgagtatgagagagaaagttgt 611906  T
Q  326 cacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||||| |  |||||||||||||    
T  611905 cacaaaagttgtcaaaaagtaattgttcaaatatc 611871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 28306118 - 28306196
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| || ||||| ||| |||||||  ||||| ||||||||||||| | ||||||||||||||||||||||    
T  28306118 agagagaaagtaagaagataatgtgagtatgagagataaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 28306196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 54839 - 54710
Alignment:
Q  230 caactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcaca 329  Q
    |||| |||||||||||||||||   || ||||||||||||| | ||||| | |||||||||||||| || |||  || ||||||| | |||  | ||| |    
T  54839 caaccaaaatatacaaagaagtacgagtattgacacaaaaatcaaagcgttggagagaaagtaaaaccaaaatgagagtatgaga-gaaaaattatcata 54741  T
Q  330 aaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| |||||||||| |||||||||||||    
T  54740 aaagttgtcaaaaaatgattgttcaaatatc 54710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 360
Target Start/End: Original strand, 13089713 - 13089846
Alignment:
Q  229 acaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtc 326  Q
    |||| |||| ||||||||||| |||| | | ||||||||||| | ||||  ||||||||  ||||| ||  ||||| ||| ||||| |   |||| ||||    
T  13089713 acaattaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagtagaatgataatgtgagtatgaaagagaaagttgtc 13089812  T
Q  327 acaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  13089813 acaaaagttgtcaaaaaatggttgttcaaatatc 13089846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 24468272 - 24468350
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||| ||||| ||| ||||||||  |||| | ||||||||||| |  |||||||||||||||||||||    
T  24468272 gagagaaagtaaaaatataatgtgagtatgagatagaaagttatcacaaaagttgtttaaaaatggttgttcaaatatc 24468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 35646469 - 35646391
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    ||||||||||||||||| ||||| ||| |||||||   |||| | |||| |||||||| ||||||||||||||||||||    
T  35646469 tagagagaaagtaaaaaaataatgtgagtatgagagagaaagttatcactaaagttataaaaaaatggttgttcaaata 35646391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 1274468 - 1274365
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  ||||||||  |||||||||  |||| ||| ||||| |  ||||| ||||||||||||| || ||||||||||||||||    
T  1274468 attgacacaaaaaccaaagcaatagagagaggaagtaaaaaggtaatgtgagtatgaaagataaagttgtcacaaaagttgtc-aaaaatggttgttcaa 1274370  T
Q  356 atatc 360  Q
    |||||    
T  1274369 atatc 1274365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 21156071 - 21155994
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||| ||||| ||| ||||| |   |||| ||||||||||||| ||||||||||||||||||||||||    
T  21156071 agagaaagtgaaaatataatgtgagtatgaaagagaaaggtgtcacaaaagttgtcaaaaaatggttgttcaaatatc 21155994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 33958220 - 33958324
Alignment:
Q  258 attgacacaaaaacctaagcggtagag--agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  |||||  |||||||||||| ||||| ||| ||||| ||  |||| | |||||||| ||||| ||||||| ||||||||    
T  33958220 attgacacaaaaaccaaagcaatagagagagaaagtaaaaatataatgtgagtatgatatagaaagttatcacaaaaattatccaaaaatgattgttcaa 33958319  T
Q  356 atatc 360  Q
    |||||    
T  33958320 atatc 33958324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 11148598 - 11148518
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||||||| ||| |||||||   || | ||||||||||||| ||||||| || |||| ||||||||    
T  11148598 tagagagaaagtaaaaacataatgtgagtatgagagagaatgttgtcacaaaagttgtcaaaaattgattgtacaaatatc 11148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 4719736 - 4719657
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||| ||| |||||||   || | ||||||||||||| ||||||| ||||||| ||||||||    
T  4719736 agagaaaaagtaaaaacataatgtgagtatgagagaaaaggttgtcacaaaagttgtcaaaaattggttgtacaaatatc 4719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 7076554 - 7076632
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||||||| |||||||   |||  |||||||||| |||| |||||||| |||||||||||||    
T  7076554 agagagaaagtaaaaaaataatatgagtatgagagagaaaattgtcacaaaaattat-aaaaaatgattgttcaaatatc 7076632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 7287175 - 7287254
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| | |||||||||||||| |||||||    
T  7287175 agagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaaatggttgtttaaatatc 7287254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 19521989 - 19522067
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| | ||||||||||||||||||||||    
T  19521989 agagagaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 19522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 22098341 - 22098262
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | | ||||||||||| ||||||||    
T  22098341 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatc 22098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 14011454 - 14011324
Alignment:
Q  230 caactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcaca 329  Q
    |||| |||||||||||| || | |||  ||||||||||||||| || |  ||||||||||||||  | | ||||||| | ||| ||  |||| |||||||    
T  14011454 caaccaaaatatacaaaaaaatataaagattgacacaaaaaccaaaacaatagagagaaagtaaggaaacaatatgagtgtgaaatagaaagttgtcaca 14011355  T
Q  330 aaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| | | |||||| |||||||||||||    
T  14011354 aaagttgttacaaaatgattgttcaaatatc 14011324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 24860105 - 24860031
Alignment:
Q  286 gaaagtaaaaacataatatgaatatgagatg-taaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||| |||||||||||||||| ||||| | | ||||| |||||||||| || ||||||||||||||| |||||||    
T  24860105 gaaaataaaaacataatatgagtatgaaaagataaagttgtcacaaaaattgtcaaaaaatggttgtacaaatat 24860031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 26791230 - 26791307
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||| ||||| |||  ||||||   |||| ||||||||||||| | |||||||||||||||||||||    
T  26791230 agagagaaagtaaaaagataatgtgagcatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatat 26791307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 31683429 - 31683514
Alignment:
Q  231 aactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgaga 314  Q
    |||| |||||||||||||| | | || ||||||||||||||| || |  || |  |||||||||||||||||||||||||||||||    
T  31683429 aacttaaatatacaaagaaatatgagtattgacacaaaaaccaaaacaataaaaagagaaagtaaaaacataatatgaatatgaga 31683514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 7552928 - 7553005
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagtt 335  Q
    ||||||||||||| | | || |||||||||||||||||||||||| ||| | |||||   |||| |||||||||||||    
T  7552928 attgacacaaaaatcaatgcagtagagagaaagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagtt 7553005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 26686968 - 26686903
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaat 345  Q
    ||||||||||||||||| ||||| |||||||||||   |||| |||||||||| |||| |||||||    
T  26686968 tagagagaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaat 26686903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 26956699 - 26956634
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaat 345  Q
    ||||||||||||||||| ||||| |||||||||||   |||| |||||||||| |||| |||||||    
T  26956699 tagagagaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaat 26956634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 27546143 - 27546070
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||| ||| |||||||  ||||| |||||||||| || ||| |||||| |||||||||||||    
T  27546143 aaagtaaaaatataatgtgagtatgagaaataaagttgtcacaaaatttgtcataaaatgattgttcaaatatc 27546070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 345
Target Start/End: Complemental strand, 14532637 - 14532526
Alignment:
Q  236 aaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaag 333  Q
    |||||||||||||| | | |  |||||||||| |||| ||||  ||||||  ||||||||||||| ||| ||| |||||||   |||| ||||||||||     
T  14532637 aaatatacaaagaaatatgaatattgacacaagaaccaaagcaatagagaaagaaagtaaaaacaaaatgtgagtatgagagagaaagttgtcacaaaaa 14532538  T
Q  334 ttatcaaaaaat 345  Q
    ||||||||||||    
T  14532537 ttatcaaaaaat 14532526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 35075560 - 35075640
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| |||||| ||||| ||| |||||||   |||| |||||||  |||| |||||||||| |||||||||||||    
T  35075560 tagagagaaaataaaaatataatgtgagtatgagagaaaaagttgtcacatcagttgtcaaaaaatgattgttcaaatatc 35075640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 189689 - 189767
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||||||||||  |||| ||| |||||||   |||| ||||||||||||||||| ||||||| ||||||||||||    
T  189689 agagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatc 189767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 5168268 - 5168190
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||  ||||| |||||| |||||| |  ||||| |||||||||||||||    
T  5168268 agagagaaagtaaaaagataatgtgagtatgagagataaagttgtcactaaagttgt-gaaaaacggttgttcaaatatc 5168190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 8097335 - 8097256
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||| |||||| ||||||||| ||||||    |||| | ||||||||||||||||||| ||||||| ||||||||    
T  8097335 agagaaaaaataaaaaaataatatgagtatgagtgagaaagttatcacaaaagttatcaaaaattggttgtacaaatatc 8097256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 12718366 - 12718444
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| | |||||||||||| |||||||||||  ||||| ||||| ||||||| ||| ||| ||||||| ||||||||    
T  12718366 agagagagaataaaaacataatgtgaatatgagagataaagttgtca-aaaagttgtcacaaattggttgtacaaatatc 12718444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 14321940 - 14322019
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||| | | |||||||||||||||   |||| ||||||||||||| | | ||||||||||| ||||||||    
T  14321940 agagagaaaataaatatacaatatgaatatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatc 14322019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 15479554 - 15479476
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||||| | |||||||   |||| ||||| ||||||| | |||||||| |||||||||||||    
T  15479554 agagagaaagtaaaaagataatataagtatgagagagaaagttgtcataaaagttgt-aaaaaatgattgttcaaatatc 15479476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 18660844 - 18660766
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||  ||| |||||||   |||  ||||||||||||| ||||||| ||||||||||||||||    
T  18660844 agagagaaagtaaaaagataacgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaa-tggttgttcaaatatc 18660766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 19481168 - 19481246
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||||||||||  |||| ||| |||||||   |||| ||||||||||||||||| ||||||| ||||||||||||    
T  19481168 agagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatc 19481246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 33037605 - 33037527
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||| ||| |||||||   |||| ||||| ||||||| | ||||||||||||||||||||||    
T  33037605 agagaaaaagtaaaaagataatgtgagtatgagagagaaagttgtcataaaagttgt-aaaaaatggttgttcaaatatc 33037527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 40829500 - 40829421
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||| ||| |||||||   |||  |||||||||| |||| ||||||||||||| ||||||||    
T  40829500 agagataaagtaaaaatataatgtgagtatgagagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatc 40829421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 3564648 - 3564594
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatga 312  Q
    ||||||| ||||||| || |  ||||||||||||||||||||||||||| |||||    
T  3564648 attgacaaaaaaaccaaatcaatagagagaaagtaaaaacataatatgagtatga 3564594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 5721804 - 5721881
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||| ||||| | | |||||||  ||||| |||||||||| || | ||||||| ||||||||||||||    
T  5721804 gagagaaagtaaaaagataatgtcagtatgagagataaagttgtcacaaaaattgt-aaaaaatagttgttcaaatatc 5721881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 8686970 - 8686901
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    |||||||||| ||||||| ||||||| |  ||||  |||||||||| |||||||||| |||||||||||||    
T  8686970 aaagtaaaaagataatataaatatgaaagataaaattgtcacaaaaattatcaaaaa-tggttgttcaaat 8686901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 22649648 - 22649725
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||| ||||| ||| |||||||   |||  |||||||||| || | ||||||||||||||||||||||    
T  22649648 gagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaaattgt-aaaaaatggttgttcaaatatc 22649725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 32872925 - 32872962
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  32872925 tgtcacaaaagttgtcaaaaaatagttgttcaaatatc 32872962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 34080287 - 34080320
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgaga 314  Q
    |||||||||||||||||||||||| |||||||||    
T  34080287 agagagaaagtaaaaacataatataaatatgaga 34080320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 40039334 - 40039297
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  40039334 tgtcacaaaaattatcaaaaaatagttgttcaaatatc 40039297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 1079937 - 1080016
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| |||||||||||| ||||| |||||||||||   |||| |||||||||| || | |||||||  |||||||||||||    
T  1079937 tagaaagaaagtaaaaagataatgtgaatatgagagagaaagttgtcacaaaaattgt-aaaaaataattgttcaaatatc 1080016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 6596437 - 6596397
Alignment:
Q  262 acacaaaaacctaagcggtagagagaaagtaaaaacataat 302  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  6596437 acacaaaaaccaaagcaatagagagaaagtaaaaacataat 6596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 16690605 - 16690506
Alignment:
Q  263 cacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||  ||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| | || |||||||||| ||||||||    
T  16690605 cacaaaaaccaaagcaatagagaaagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatc 16690506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 18258778 - 18258857
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| ||| |||||| ||||| | | |||||||   |||| |||||| |||||||| ||||||||||||||||||||||    
T  18258778 tagagaaaaaataaaaagataatgtaagtatgagagagaaagttgtcactaaagttat-aaaaaatggttgttcaaatatc 18258857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 20478520 - 20478460
Alignment:
Q  217 acaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagc 277  Q
    |||| |||||||||||| ||||||||||||||| | |||  | ||||||||||||| ||||    
T  20478520 acaacttattggacaaccaaaatatacaaagaaatgtaatgactgacacaaaaaccaaagc 20478460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 32540006 - 32540078
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||| | | |||||||   |||||||| |||||||||| |  ||| |||||||||||||||    
T  32540006 aaagtaaaaacataatgttagtatgagagagaaagctgttacaaaagttaccgcaaattggttgttcaaatat 32540078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 39807699 - 39807778
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagat-gtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||| |||||| ||||| ||| |||||||  |||||| ||||| |||| || | ||||||||||||||||||||||    
T  39807699 agagagaaaataaaaagataatttgagtatgagagagtaaagttgtcataaaaattgt-aaaaaatggttgttcaaatatc 39807778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 5522605 - 5522702
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||||||||||  ||||| |||||||||||  ||||| |||||||||| ||||||||| |||  ||||||||||||    
T  5522605 cacaaaaaccaaagcaatagagagaaagtaaaagtataatgtgaatatgagagataaagttgtcacaaaaattatcaaaagatgaatgttcaaatatc 5522702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 17551339 - 17551443
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| || |  ||||||||  ||||||||||||||| ||| |||||||   |||| ||| ||||||||| |||||||||||||||||||    
T  17551339 attgacacaaaaaccaaaacaatagagagataaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaa 17551438  T
Q  356 atatc 360  Q
    |||||    
T  17551439 atatc 17551443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 24900859 - 24900782
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||||||||| |   |||| ||||||||||||| ||||||||||||||||||||||||    
T  24900859 agagagaaagtaaaaatataatgtgaatatgaaag--aaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatc 24900782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 360
Target Start/End: Original strand, 8505690 - 8505838
Alignment:
Q  215 tgacaatttattggacaactaaaat-atacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaa--gtaaaaacataatatgaatatg 311  Q
    ||||||||| |||||||||| |||| |||||||||| |||| | | |   ||||||| | ||||  ||||||||||  ||||||  ||||| ||||||||    
T  8505690 tgacaattttttggacaacttaaattatacaaagaaatttaggtagttgtacaaaaatcaaagcaatagagagaaaaagtaaaaggataatgtgaatatg 8505789  T
Q  312 agatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||   |||| ||||||||||||| |||||||||| |||||||||||||    
T  8505790 agagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatc 8505838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 22079549 - 22079627
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| | |||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  22079549 agagagaaagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 22079627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 25811824 - 25811902
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  25811824 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 25811902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 360
Target Start/End: Original strand, 2241955 - 2242086
Alignment:
Q  228 gacaactaaaata-tacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtc 326  Q
    |||||| |||||| |||||||||  | | ||||||||||||||||| ||||  |||||| ||  ||||||| |||| ||| |||||||   |||| ||||    
T  2241955 gacaaccaaaataatacaaagaaaatgaggcattgacacaaaaaccaaagcaatagagaaaa--taaaaacttaatgtgagtatgagagagaaagttgtc 2242052  T
Q  327 acaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| || |||||||||| |||||||||||||    
T  2242053 acaaaaattgtcaaaaaatgattgttcaaatatc 2242086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 552878 - 552800
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||   |||| ||||||| ||||| | |||||||| |||||||||||||    
T  552878 agagagaaagtaaaaagataatgtgaatatgagagacaaagttgtcacataagttgt-aaaaaatgtttgttcaaatatc 552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 31883289 - 31883368
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| |||| || ||| ||||||| | |||| ||| ||||||||| ||||||| ||||||| ||||||||    
T  31883289 agagagaaagtaaatacatgatgtgagtatgagaggaaaagttgttacaaaagttgtcaaaaagtggttgtacaaatatc 31883368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 32459502 - 32459581
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||||||||||  |||| |||||||||||   |||| ||||||||||||| ||| ||||||| ||||||||||||    
T  32459502 agagataaagtaaaaaagtaatgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatc 32459581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 360
Target Start/End: Complemental strand, 8645452 - 8645316
Alignment:
Q  225 ttggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagc 322  Q
    ||||||||||||| ||||||||||| |||| | | |||| || ||| | ||||  |  |||||||||||||||  ||||| ||| |||||||   ||||     
T  8645452 ttggacaactaaattatacaaagaaatttaggtagtgacgcataaatcaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaagt 8645353  T
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||||| | ||||||||||||||    
T  8645352 tgtcacaaaagttgtcaaaaagt-gttgttcaaatatc 8645316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 345
Target Start/End: Complemental strand, 3772497 - 3772377
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaa--gtaaaaacataatatgaatatgagatgtaaagctg 324  Q
    ||||||| ||||||||||||||| ||||   | ||||||||||| | || |  |||| |||||  ||||||| ||||||||||||| ||| | |||| |     
T  3772497 ggacaaccaaaatatacaaagaaatttagatagtgacacaaaaatcaaatcaatagaaagaaaaggtaaaaagataatatgaatataagaggaaaagtta 3772398  T
Q  325 tcacaaaagttatcaaaaaat 345  Q
    ||||||||||| |||||||||    
T  3772397 tcacaaaagttgtcaaaaaat 3772377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 21418279 - 21418332
Alignment:
Q  219 aatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacc 272  Q
    ||||||||||| ||| ||||||||||||||| | |||| |||||||||||||||    
T  21418279 aatttattggataaccaaaatatacaaagaaatgtaaggattgacacaaaaacc 21418332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 21467964 - 21468017
Alignment:
Q  219 aatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacc 272  Q
    ||||||||||||||| ||||||||||||||| | |||| |||||| ||||||||    
T  21467964 aatttattggacaaccaaaatatacaaagaaatgtaaggattgactcaaaaacc 21468017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 26595459 - 26595356
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    ||||||||||||||| ||||  ||||||||  ||||||||||||||| ||| |||||||   |||  ||| | |||||||||| |||||| |||||||||    
T  26595459 attgacacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagaaaaaattgttataaaagttatc-aaaaatagttgttcaa 26595361  T
Q  356 atatc 360  Q
    |||||    
T  26595360 atatc 26595356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 8098583 - 8098659
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| | ||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  8098583 agagagaaagtaaaaagaaaatgtgagtatgagag--aaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 8098659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 11635543 - 11635599
Alignment:
Q  304 tgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||   |||| ||||||||||||| |||||||||| |||||||||||||    
T  11635543 tgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatc 11635599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 34047497 - 34047394
Alignment:
Q  258 attgacacaaaaacctaagcggtagagaga-aag-taaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaa 355  Q
    |||| |||||||||| ||||  |||||||| ||| |||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||||||||||||    
T  34047497 attggcacaaaaaccaaagcaatagagagataagataaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaa 34047399  T
Q  356 atatc 360  Q
    |||||    
T  34047398 atatc 34047394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 5080553 - 5080631
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| ||||| |   |||| ||||||||||||| | ||||| ||||||||||||||||    
T  5080553 agagagaaagtaaaaaaataatgtgagtatgaaagagaaagttgtcacaaaagttgt-aaaaagtggttgttcaaatatc 5080631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 5694137 - 5694215
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||||||||| |||||||||||  ||||  | |||||||| || | ||||||||||| ||||||||||    
T  5694137 agagaaaaagtaaaaacataatgtgaatatgagaaataaaattatcacaaaaattgt-aaaaaatggttattcaaatatc 5694215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 10335636 - 10335557
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||  ||||| ||||||| ||||  ||| |||||||||||  |||||||    
T  10335636 agagagaaagtaaaaaaataatgtgagtatgagagataaagttgtcacataagtcgtcacaaaatggttgtcaaaatatc 10335557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 25127818 - 25127897
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| ||| |||   |||| | ||||||||||| | | ||||||||||| ||||||||    
T  25127818 agagagaaagtaaaaacataatgtgagtatcagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatc 25127897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 32316891 - 32316992
Alignment:
Q  260 tgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  ||||||||  ||||||||| ||||| ||| ||||| |   ||||||||||| |||||| | ||||||| |||||||||||    
T  32316891 tgacacaaaaaccaaagcaatagagagataaagtaaaaagataatgtgagtatgaaagagaaagctgtcactaaagttgt-aaaaaatagttgttcaaat 32316989  T
Q  358 atc 360  Q
    |||    
T  32316990 atc 32316992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 16337909 - 16337987
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||| ||||| ||| |||||||   |||| ||| ||||||||||| | ||||||||||| | ||||||    
T  16337909 gagagaaagtaaaaatataatgtgagtatgagagagaaagttgttacaaaagttattataaaatggttgtaccaatatc 16337987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 16368033 - 16368111
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||| ||||| ||| |||||||   |||| ||| |||||| |||| | ||||||||||| ||||||||    
T  16368033 gagagaaagtaaaaatataatgtgagtatgagaaagaaagttgttacaaaaattattataaaatggttgtacaaatatc 16368111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 33712369 - 33712327
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  33712369 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 33712327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 33430344 - 33430420
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||||||| ||| | |   |||| |||| |||||||||| ||||||||||||||||| ||||    
T  33430344 agagaaagtaaaaagataatatgagtataaaaaagaaagttgtcgcaaaagttat-aaaaaatggttgttcaattatc 33430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 35077203 - 35077130
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||| ||| ||||| |  ||||| ||| | ||||||| ||||||||| ||||||||||||||    
T  35077203 aaagtaaaaacacaatgtgagtatgaaagataaagttgttataaaagttgtcaaaaaattgttgttcaaatatc 35077130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 21418403 - 21418435
Alignment:
Q  217 acaatttattggacaactaaaatatacaaagaa 249  Q
    ||||||||||||||||| |||||||||||||||    
T  21418403 acaatttattggacaaccaaaatatacaaagaa 21418435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 21468086 - 21468118
Alignment:
Q  217 acaatttattggacaactaaaatatacaaagaa 249  Q
    ||||||||||||||||| |||||||||||||||    
T  21468086 acaatttattggacaaccaaaatatacaaagaa 21468118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 10811277 - 10811142
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaa--gtaaaaacataatatgaatatgagatgtaaagctg 324  Q
    |||||||  |||||||||||||| | | || ||||||||||| ||| ||||  |||||||| |  ||||||||| ||| ||| |||||||   |||| ||    
T  10811277 ggacaacctaaatatacaaagaaatatgagtattgacacaaataccaaagcaatagagagagaaggtaaaaacacaatgtgagtatgagagagaaagttg 10811178  T
Q  325 tcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||| ||| ||||||||||||||||||||    
T  10811177 tcacaaaagttgtcataaaatggttgttcaaatatc 10811142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 34456944 - 34456797
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatga 312  Q
    ||||||| | || |||||||||| ||||||||||| |||| | |||| ||||||||   ||||  |  |||||||||||||||| ||||||||| |||||    
T  34456944 tgacaatcttttagacaactaaattatacaaagaaatttaggtattggcacaaaaattaaagcaatagagagagaaagtaaaaagataatatgagtatga 34456845  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||   |||| | ||||||||||| ||||||| ||||| ||||||||||    
T  34456844 gagagaaagttatcacaaaagttgtcaaaaagtggttattcaaatatc 34456797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 48346980 - 48346833
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatga 312  Q
    ||||||||| | |||||||  |||||||||||||| | | |  ||||||||||||||| ||||  ||||||||  ||||||||||| ||||| | |||||    
T  48346980 tgacaatttgtgggacaacctaaatatacaaagaaatatgaatattgacacaaaaaccaaagcaatagagagagaaagtaaaaacaaaatataagtatga 48346881  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
     |   |||| ||||||||| ||| |||||||||| |||||||||||||    
T  48346880 aagagaaagttgtcacaaacgttgtcaaaaaatgattgttcaaatatc 48346833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 288834 - 288732
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||||| ||||||| |||||||||||    
T  288834 tgacacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttataaaaaaattgttgttcaaat 288735  T
Q  358 atc 360  Q
    |||    
T  288734 atc 288732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 33939321 - 33939243
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||||||||||   |||| |||||||||| |||| ||||||||||||||||||||||    
T  33939321 agagagaaagtaaaaagataatgtgaatatgagagagaaagttgtcacaaaaattat-aaaaaatggttgttcaaatatc 33939243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 42672820 - 42672899
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| |||||||||||   |||  |||||||||| |||||||||||| ||||| ||||||||    
T  42672820 agagagaaagtaaaaacataatgtgaatatgagagaaaaatttgtcacaaaaattatcaaaaaatagttgtgcaaatatc 42672899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 47472414 - 47472336
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||||||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  47472414 agagagaaagtaaaaagataatatgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 47472336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 32363085 - 32362940
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||||||||||||||| | | ||||||||||  |||| | | || || ||| | | ||||  ||||||||||||||||  | ||| ||  |||||||    
T  32363085 tgacaatttattggacaaccacattatacaaagagatttaggtagtggcataaatatcaaagcaatagagagaaagtaaaagaacaatgtgtgtatgaga 32362986  T
Q  315 tgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
      ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  32362985 gataaagttgtcataaaagttgtcaaaaaatggttgttcaaatatc 32362940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 358
Target Start/End: Complemental strand, 3648688 - 3648588
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| | || |  |||||| |||||||||| | ||| |||||||||||   |||  ||||||||||||||||| |||||||||||||||||    
T  3648688 attgacacaaaaatcaaaacaatagagataaagtaaaaatacaatgtgaatatgagagagaaaattgtcacaaaagttatcataaaatggttgttcaaat 3648589  T
Q  358 a 358  Q
    |    
T  3648588 a 3648588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 26014897 - 26014819
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  26014897 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 26014819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 26550323 - 26550244
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||  ||||| |||||||||||   |||| |||||||||| |||| ||||||||||||| ||||||||    
T  26550323 agagagaaagtaaaattataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatc 26550244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 48353082 - 48353003
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||||||| |||||||   |||| ||||||||||||| | ||||||||| ||| ||||||||    
T  48353082 agagagaaagtaaaaatataatatgagtatgagagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatc 48353003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 48405496 - 48405417
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   |||| ||| ||||||||| ||| ||||||||||| ||||||||    
T  48405496 agagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatc 48405417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 50314710 - 50314631
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   |||  ||||  |||||||||||||||||| |||||||||||||    
T  50314710 agagagaaagtaaaaacataatgtgagtatgagagagaaaattgtcgaaaaagttatcaaaaaatgattgttcaaatatc 50314631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 52963305 - 52963380
Alignment:
Q  285 agaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| |||||||||||||||||   |||  ||||||||||||| | ||||||||||||| ||||||||    
T  52963305 agaaagtaaaaatataatatgaatatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatc 52963380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 44413883 - 44413984
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||||| ||||  ||||||||| ||||||| ||||| ||| |||||||   |||| ||||||||||||| | ||||||| |||||||| ||    
T  44413883 attgacacaaaaaccaaagcaatagagagaaggtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaattgttgttcatat 44413981  T
Q  358 atc 360  Q
    |||    
T  44413982 atc 44413984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 42357047 - 42357144
Alignment:
Q  260 tgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||||||| ||||  |||||||| |||||||| || || ||| |||||||   |||| ||||||||||||| | |||||||||||||||||||||    
T  42357047 tgacacaaaaaccaaagcaatagagagagagtaaaaagatcatgtgagtatgaga--gaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatat 42357143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 46623990 - 46623914
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||| ||||||| |||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  46623990 agagaaagtaaaaagataatgtgaatatcagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 46623914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 360
Target Start/End: Original strand, 4494154 - 4494301
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatga 312  Q
    |||||| || ||||||||| ||| ||||||||||| |||| | | ||||||||||| | ||||  ||||  ||||||||||||  || || ||| ||| |    
T  4494154 tgacaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagagaaagtaaaatgatgatgtgagtataa 4494253  T
Q  313 gatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||   |||| |||||||||| |||||||||||| ||| ||||||||||    
T  4494254 gagagaaagttgtcacaaaaattatcaaaaaatagttattcaaatatc 4494301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 41308999 - 41308932
Alignment:
Q  292 aaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||||||||| |||||||   |||| ||||||||||||||| ||||||||||||||||||||||    
T  41308999 aaaaatataatatgagtatgagagagaaagttgtcacaaaagttat-aaaaaatggttgttcaaatatc 41308932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 5244314 - 5244236
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||| |||||||||||||||||    
T  5244314 agagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaatatggttgttcaaatatc 5244236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 27168667 - 27168746
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| ||||| ||  ||||||||| |||||||   |||| |||||||||| |||| ||||||||||||||||||||||    
T  27168667 agagaggaagtagaagaataatatgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatc 27168746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 28539726 - 28539804
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||||||| | |||||   |||  |||||||||| |||| ||||||| ||||||||||||||    
T  28539726 agagagaaagtaaaaacataatatgagtgtgagaaagaaaattgtcacaaaaattat-aaaaaatagttgttcaaatatc 28539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 37302631 - 37302553
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||  |||| |||||||||||   |||| ||||||||||||| | |||||||||||||| |||||||    
T  37302631 agagagaaagtaaaaaggtaatgtgaatatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttaaaatatc 37302553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 38926736 - 38926635
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||| ||||||||| ||| | |||||||||||||||||||    
T  38926736 tgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaacgttgt-aaaaaatggttgttcaaat 38926638  T
Q  358 atc 360  Q
    |||    
T  38926637 atc 38926635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 39629824 - 39629903
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   || | ||||||||||||| | ||||||| ||||| ||||||||    
T  39629824 agagagaaagtaaaaacataatgtgagtatgagagagaaggttgtcacaaaagttgtaaaaaaatagttgtacaaatatc 39629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 50559197 - 50559276
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| | | |||||||   |||  ||||||||||||| ||||||||| ||||| ||||||||    
T  50559197 agagagaaagtaaaaacataatgtaagtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatc 50559276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 359
Target Start/End: Complemental strand, 13735237 - 13735137
Alignment:
Q  260 tgacacaaaaacctaagcggtagaga--gaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  ||||||  |||| |||||| ||||||||| |||||||   |||| |||||||||| || | |||||||||||||||||||    
T  13735237 tgacacaaaaaccaaagcaatagagaaagaaaataaaaagataatatgagtatgagaaagaaagttgtcacaaaaattgt-aaaaaatggttgttcaaat 13735139  T
Q  358 at 359  Q
    ||    
T  13735138 at 13735137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 26772454 - 26772376
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||||||| ||||||  |||| |||||||||||   |||| |||||||||| |||| | |||||||||||||||||||    
T  26772454 agagagaaaataaaaatgtaatgtgaatatgagagagaaagttgtcacaaaaattattataaaatggttgttcaaatat 26772376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 49780701 - 49780803
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    |||| |||||||||| ||||  |||| | |||  ||||| ||||||||||||||||||  |||| ||||||||||||| |  ||||||| ||||| ||||    
T  49780701 attggcacaaaaaccaaagcaatagaaaaaaaaaaaaaatataatatgaatatgagatagaaagttgtcacaaaagttgtgcaaaaatgattgtttaaat 49780800  T
Q  358 atc 360  Q
    |||    
T  49780801 atc 49780803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 6093864 - 6093941
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    |||||||||||||||| |||||  || |||||||  ||||| ||||||||||||| ||||| | ||||||| ||||||    
T  6093864 agagagaaagtaaaaagataatgcgagtatgagagataaagttgtcacaaaagttgtcaaatattggttgtacaaata 6093941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 13934594 - 13934666
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||||||||||| |||   |||| |||||||||||||||||  |||||| ||||||||||||    
T  13934594 aaagtaaaaa-ataatatgaatataagaaagaaagttgtcacaaaagttatcatcaaatggatgttcaaatatc 13934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 51137023 - 51137100
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||| | | | |||||   |||| ||||||||||||||| ||||||| ||||| ||||||||    
T  51137023 agagaaagtaaaaacataatgtaagtctgagagaaaaagttgtcacaaaagttattaaaaaatagttgtacaaatatc 51137100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 36670980 - 36671078
Alignment:
Q  263 cacaaaaacctaagcggtagagagaaa--gtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||  ||||||||||  ||||||| ||||| ||| |||||||   |||| |||||||||| || | ||||||||||||||||||||||    
T  36670980 cacaaaaaccaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaaattgt-aaaaaatggttgttcaaatatc 36671078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 52939736 - 52939660
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| || || ||| |||||||   |||| ||||||||||||| | ||||||||||||||||||||||    
T  52939736 agagagaaagtaaaaagatcatgtgagtatgagag--aaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatc 52939660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 6178411 - 6178489
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||||||||| ||| |||||||   |||  ||||||||||||| || |||||| ||||| ||||||||    
T  6178411 agagagaaagtaaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgtc-aaaaatagttgtacaaatatc 6178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 27541488 - 27541566
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||  |||||| |||||| | ||||||||||||||||||||||    
T  27541488 agagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcactaaagttgt-aaaaaatggttgttcaaatatc 27541566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 41505599 - 41505498
Alignment:
Q  260 tgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| ||||  |  |||||||||||||||| ||||| ||| |||||||   |||| ||||||||||||| | |||||||  ||||||||||    
T  41505599 tgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaataattgttcaaat 41505501  T
Q  358 atc 360  Q
    |||    
T  41505500 atc 41505498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 45711425 - 45711503
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| ||| |||||||   |||  ||||||||||||| | ||||||| ||||||||||||||    
T  45711425 agagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgt-aaaaaattgttgttcaaatatc 45711503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 49021797 - 49021718
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| ||| |||||| ||||| ||| |||||||   |||| ||||||||||||||| ||||||||| ||| ||||||||    
T  49021797 agagacaaaataaaaatataatgtgagtatgagaaagaaagttgtcacaaaagttattaaaaaatggatgtacaaatatc 49021718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 52326104 - 52326026
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||||| ||||| |||  ||||||   |||| ||||||||||||| | ||||||||||| ||||||||||    
T  52326104 agagagaaagtaaaaagataatgtgagcatgagagagaaagttgtcacaaaagttgt-aaaaaatggttattcaaatatc 52326026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 9311125 - 9311047
Alignment:
Q  282 gagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||||||||||||||| | | |||   |||| |||||||||  |||||| |||||| |||| ||||||||    
T  9311125 gagagaaagtaaaaacataatatgagtgtaagagagaaagttgtcacaaatattatcagaaaatgattgtacaaatatc 9311047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 9862582 - 9862540
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| |||||||||||||  |||||||||||||||||||||||    
T  9862582 aaagttgtcacaaaagttgacaaaaaatggttgttcaaatatc 9862540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 34057975 - 34058017
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||    
T  34057975 aaagttgtcacaaaagttatcataaaatggatgttcaaatatc 34058017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 34627867 - 34627945
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    |||||||||||||||| ||||||||| ||| | |   |||| | ||||||||||| ||||||||| ||||| |||||||    
T  34627867 agagagaaagtaaaaatataatatgagtataaaaaagaaagttatcacaaaagttgtcaaaaaatagttgtacaaatat 34627945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 35299835 - 35299937
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaat 357  Q
    ||||||||||||| | ||||  |||||||||| |||||| ||||||  ||||||| |   |||| | ||| ||||||| |||||||||| |||| |||||    
T  35299835 attgacacaaaaatcaaagcaatagagagaaaataaaaatataataaaaatatgaaagaaaaagttatcataaaagttgtcaaaaaatgattgtacaaat 35299934  T
Q  358 atc 360  Q
    |||    
T  35299935 atc 35299937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 9692866 - 9692778
Alignment:
Q  228 gacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggt--agagagaaagtaaaaacataatatgaatatgaga 314  Q
    |||||||||| |||||||||||  ||| ||| ||||||||||| | ||||  |  |||||||||||||||  ||||| |||||||||||    
T  9692866 gacaactaaattatacaaagaaagttaggcagtgacacaaaaatcaaagcaatagagagagaaagtaaaatgataatgtgaatatgaga 9692778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 16969554 - 16969630
Alignment:
Q  283 agagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||||| ||||| ||| |||||||   |||| ||||| ||||||| || ||||||||||||| |||||||    
T  16969554 agagaaagtaaaaagataatgtgagtatgagagagaaagttgtcaaaaaagttgtc-aaaaatggttgttaaaatatc 16969630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 24095398 - 24095470
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||| ||||| ||| |||||||   |||| |||||||||| |||||| ||||||| ||||||||||||    
T  24095398 aaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatc 24095470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 360
Target Start/End: Original strand, 27089890 - 27090034
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||||| | ||||||   |||||||||||||| | | || ||||| ||||||||| ||||  |||||| |||||||||||| ||| | ||||| | |    
T  27089890 tgacaatttctgggacaatctaaatatacaaagaaatatgagtattgatacaaaaaccaaagcaatagagaaaaagtaaaaacaaaatgtaaatataaaa 27089989  T
Q  315 tgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
      ||||  ||||||||||  ||| |||||||| |||| ||||||||    
T  27089990 gataaaattgtcacaaaa-atataaaaaaatgattgtacaaatatc 27090034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 32187221 - 32187148
Alignment:
Q  287 aaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| |||||||||||   || | ||||| ||||||| ||| ||||||||||| ||||||||    
T  32187221 aaagttaaaacataatgtgaatatgagagagaaggttgtcataaaagttgtcacaaaatggttgtacaaatatc 32187148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 32587758 - 32587815
Alignment:
Q  258 attgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagat 315  Q
    |||| |||||||||| ||||  |||||||||| |||||||||||| ||| ||||||||    
T  32587758 attggcacaaaaaccaaagcaatagagagaaattaaaaacataatgtgagtatgagat 32587815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 38296648 - 38296681
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgaga 314  Q
    ||||||||| ||||||||||||||||||||||||    
T  38296648 agagagaaaataaaaacataatatgaatatgaga 38296681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 28700602 - 28700495
Alignment:
Q  227 ggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagaga--aagtaaaaacataatatgaatatgagatgtaaagctg 324  Q
    |||||||| || |||||||||||   | || |||| |||||||||| ||||  ||||||||  ||||||||||||||| ||| |||||||  ||||| ||    
T  28700602 ggacaacttaagtatacaaagaaagatgagtattggcacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagataaagttg 28700503  T
Q  325 tcacaaaa 332  Q
    ||| ||||    
T  28700502 tcaaaaaa 28700495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 30863061 - 30863140
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||| |||||||||| ||||||| | |||||||   |||| |||||||||| ||||||  |||||| ||||||||||||    
T  30863061 tagagaaaaagtaaaaa-ataatataagtatgagagagaaagttgtcacaaaaattatcatcaaatggatgttcaaatatc 30863140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 37057085 - 37057121
Alignment:
Q  323 tgtcacaaaagttatcaaaaaatggttgttcaaatat 359  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  37057085 tgtcataaaaattatcaaaaaatggttgttcaaatat 37057121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 48789394 - 48789334
Alignment:
Q  300 aatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||| ||||||||  |||| |||||||||| |||||| |||||  |||||||||||||    
T  48789394 aatatgagtatgagataaaaagttgtcacaaaaattatcagaaaataattgttcaaatatc 48789334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 360
Target Start/End: Complemental strand, 11075 - 10943
Alignment:
Q  228 gacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtca 327  Q
    |||||||||| ||||||||||| ||||   | || |||||||| | ||||  |||||||| |||||||  ||||| ||| |||||||   |||| |||||    
T  11075 gacaactaaattatacaaagaaatttagttagtggcacaaaaatcaaagcaatagagagagagtaaaatgataatgtgagtatgagagagaaagttgtca 10976  T
Q  328 caaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||| ||||||| ||||||||||| ||||    
T  10975 caaaagttgtcaaaaagtggttgttcaattatc 10943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 469623 - 469702
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| |||||||| ||| | |||||   |||| |||||||||| |||||||||||||||||| ||||||||    
T  469623 agagagaaagtaataacataatgtgagtgtgagagagaaagttgtcacaaaaattatcaaaaaatggttgtacaaatatc 469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 49377 - 49302
Alignment:
Q  284 gagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||||| ||||| ||| |||||||   |||| ||||| ||||||||| ||||||||||||||||||||||    
T  49377 gagaaagtaaaaagataatgtgagtatgagagagaaagttgtcataaaagttat-aaaaaatggttgttcaaatatc 49302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 360
Target Start/End: Original strand, 22780 - 22918
Alignment:
Q  224 attggacaactaaaatatacaaagaagtttaagcattgacacaaaaacctaagcggtaga--gagaaagtaaaaacataatatgaatatgagatgtaaag 321  Q
    |||||||||| ||| ||||||||||| | ||   ||||||||||||||| ||||  ||||  |||||| |||||| | ||| ||| ||| |||  |||||    
T  22780 attggacaaccaaagtatacaaagaaatgtatcgattgacacaaaaaccaaagcaatagaaagagaaattaaaaaaacaatgtgagtataagaaataaag 22879  T
Q  322 ctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
     ||||| ||||||| ||| |||||| |||||||||||||    
T  22880 ttgtcataaaagttgtcacaaaatgattgttcaaatatc 22918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 246747 - 246692
Alignment:
Q  280 tagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagtt 335  Q
    ||||||||||||||||| ||||||| | ||||||||| |||| |||||||||||||    
T  246747 tagagagaaagtaaaaatataatataagtatgagatgaaaagttgtcacaaaagtt 246692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 28349 - 28391
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  28349 aaagttgtcacaaaagttatcaaaaagtggttgttcaaatatc 28391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 90085 - 89991
Alignment:
Q  241 tacaaagaagtttaagcattgacacaaaaacctaagcggtagagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagtt 335  Q
    |||||||||  ||||| ||||||| ||||||| |||   |||||| ||||||||||||| |||||| |||||||   |||| |||||||||||||    
T  90085 tacaaagaaaattaagtattgacataaaaaccaaaggaatagagaaaaagtaaaaacatgatatgagtatgagagaaaaagttgtcacaaaagtt 89991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 855 - 778
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||| |||||||||| ||||  ||| |||||||   |||| |||||||||| |||||||||||||| ||||||||||||    
T  855 agagataaagtaaaaaaataacgtgagtatgagag--aaagttgtcacaaaaattatcaaaaaatggatgttcaaatatc 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 6505 - 6584
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||||||| ||  | ||| ||| |||||||  ||||| ||||||||||||| | |||||||| |||||||||||||    
T  6505 agagagaaagtagaagaacaatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatc 6584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 8753 - 8675
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||||||| ||||||| ||||||||| ||||| |   |||| ||||||||||||| | |||||||| |||||||||||||    
T  8753 agagagaacgtaaaaagataatatgagtatgaaagagaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatc 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 13474 - 13529
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaa 270  Q
    |||||| |||||||||||||||| ||||||||||| |||| ||| ||| |||||||    
T  13474 tgacaacttattggacaactaaattatacaaagaaatttaggcagtgatacaaaaa 13529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 16773 - 16850
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    |||||||||||| ||| ||||| ||| |||||||   |||| ||||||||| ||| | |||||||| |||||||||||    
T  16773 agagagaaagtataaagataatgtgagtatgagagagaaagttgtcacaaatgttgttaaaaaatgattgttcaaata 16850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 59370 - 59315
Alignment:
Q  215 tgacaatttattggacaactaaaatatacaaagaagtttaagcattgacacaaaaa 270  Q
    |||||| |||||||||||||||| ||||||||||| |||| ||| ||| |||||||    
T  59370 tgacaacttattggacaactaaattatacaaagaaatttaggcagtgatacaaaaa 59315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 56071 - 55994
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaata 358  Q
    |||||||||||| ||| ||||| ||| |||||||   |||| ||||||||| ||| | |||||||| |||||||||||    
T  56071 agagagaaagtataaagataatgtgagtatgagagagaaagttgtcacaaatgttgttaaaaaatgattgttcaaata 55994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 44788 - 44830
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||    
T  44788 aaagttgtcacaaaagttataaaaaaatggttgttcaagtatc 44830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 101928 - 101970
Alignment:
Q  318 aaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    |||| ||||||||||||| |||||||||||||||||| |||||    
T  101928 aaagttgtcacaaaagttgtcaaaaaatggttgttcagatatc 101970  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 213834 - 213904
Alignment:
Q  281 agagagaaagtaaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgt 351  Q
    |||||||||||||||  ||||||| ||||||||||  |||| |||||| ||| |||||| ||| |||||||    
T  213834 agagagaaagtaaaacaataatataaatatgagataaaaagttgtcactaaaattatcataaattggttgt 213904  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 366368 - 366301
Alignment:
Q  292 aaaaacataatatgaatatgagatgtaaagctgtcacaaaagttatcaaaaaatggttgttcaaatatc 360  Q
    ||||||||||| |||||||||||   |||| ||||||||||||| |  |||||||||||| ||||||||    
T  366368 aaaaacataatgtgaatatgagagagaaagttgtcacaaaagttgt-taaaaatggttgtacaaatatc 366301  T

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