View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15761_high_15 (Length: 289)

Name: NF15761_high_15
Description: NF15761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15761_high_15
NF15761_high_15
[»] chr8 (1 HSPs)
chr8 (1-288)||(34630528-34630815)


Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 34630815 - 34630528
Alignment:
Q  1 tcatcctccacgactgtgaactatgtcgtccaccctcctacaaacggccatcctcctcaccgtagcgagcttttatacaatatggttatatgctataatt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  34630815 tcatcctccacgactatgaactatgtcgtccaccctcctacaaacggccatcctcctcaccgcagcgagcttttatacaatatgattatatgctataatt 34630716  T
Q  101 ttgtatttattgacattattgaatacttcagtgaaatccccagaaaattatgtatgaattcactcttctcttctctgtaaatgcatgtattcttttacat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34630715 ttgtatttattgacattattgaatacttcagtgaaatccccagaaaattatgtatgaattcactcttctcttctctgtaaatgcatgtattcttttacat 34630616  T
Q  201 accttaataacaagtttaatttattaaaatctgtttctgtttccttcagagtttttcagctaaactattctttgtcttgtgattgtag 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34630615 accttaataacaagtttaatttattaaaatctgtttctgtttccttcagagtttttcagctaaactattatttgtcttgtgattgtag 34630528  T

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