View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15761_low_3 (Length: 546)

Name: NF15761_low_3
Description: NF15761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15761_low_3
NF15761_low_3
[»] chr7 (4 HSPs)
chr7 (234-527)||(41689006-41689299)
chr7 (41-234)||(41688782-41688965)
chr7 (240-365)||(41681723-41681848)
chr7 (75-203)||(41681512-41681643)
[»] chr4 (7 HSPs)
chr4 (42-118)||(44668640-44668716)
chr4 (42-118)||(44687916-44687992)
chr4 (39-115)||(45088954-45089030)
chr4 (42-93)||(45095418-45095469)
chr4 (333-366)||(45095803-45095836)
chr4 (308-361)||(44669009-44669062)
chr4 (308-361)||(44688285-44688338)
[»] chr1 (13 HSPs)
chr1 (33-97)||(43983344-43983408)
chr1 (39-115)||(44004751-44004827)
chr1 (39-92)||(43986159-43986212)
chr1 (36-110)||(43908406-43908480)
chr1 (40-98)||(42414880-42414938)
chr1 (39-93)||(43917832-43917886)
chr1 (41-107)||(43990943-43991009)
chr1 (40-91)||(23682390-23682441)
chr1 (236-283)||(43908127-43908174)
chr1 (251-290)||(43993934-43993973)
chr1 (33-91)||(19567318-19567376)
chr1 (44-93)||(43993626-43993675)
chr1 (310-362)||(43986536-43986588)
[»] chr2 (7 HSPs)
chr2 (39-114)||(24002338-24002413)
chr2 (40-115)||(20596094-20596169)
chr2 (236-290)||(20578413-20578467)
chr2 (33-118)||(20575447-20575532)
chr2 (40-97)||(20585241-20585298)
chr2 (40-97)||(20603568-20603625)
chr2 (40-97)||(20895404-20895461)
[»] chr8 (4 HSPs)
chr8 (235-288)||(42694112-42694165)
chr8 (41-115)||(42694391-42694465)
chr8 (33-93)||(42700091-42700151)
chr8 (39-111)||(24041718-24041790)


Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 234 - 527
Target Start/End: Original strand, 41689006 - 41689299
Alignment:
Q  234 atgggaaatttggaatagttttccaagaatcttcgccaaaggtataaattttggtcagataatcattcgtattgtgcacaactagtagcaccttatattt 333  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41689006 atgggaaatttggaatagttttccaagaatcttcaccaaaggtataaattttggtcagataatcattcgtattgtgcacaactagtagcatcttatattt 41689105  T
Q  334 gtcgttaacttgatcatagccaaagccataatagcaatgcacgcaatcaagcgatgaagattttggagaatttttggatataaacctgatagaaaggttg 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41689106 gtcgttaacttgatcatagccaaagccataatagcaatgcacgcaatcaagcgatgaagattttggagaatttttggatataaacctgatagaaaggttg 41689205  T
Q  434 tatagactgaaactatgttgagagctaatatacatacacaacaacccattgcatgaacctagaatattgcgagacgtagtgactgtgaagctac 527  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41689206 tatagactgaaactacgttgagagctaatatacatacacaacaacccatagcatgaacctagaatattgcgagacgtagtgactgtgaagctac 41689299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 41 - 234
Target Start/End: Original strand, 41688782 - 41688965
Alignment:
Q  41 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgttnnnnnnncacacacaaagacaa 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||    
T  41688782 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgttaaaaaa--acacacaaagacaa 41688879  T
Q  141 ttactcaaaacatacagcatatctttgcacatgtagtcaccatcactttgaggcagcaacactaacacctcttttatcatccatccaattcaga 234  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41688880 --------aacatacagcatatctttgcacatgtagtcaccatcactttgaggcagcaacagtaacacctcttttatcatccatccaattcaga 41688965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 365
Target Start/End: Original strand, 41681723 - 41681848
Alignment:
Q  240 aatttggaatagttttccaagaatcttcgccaaaggtataaattttggtcagataatcattcgtattgtgcacaactagtagcaccttatatttgtcgtt 339  Q
    ||||| ||||||||| | ||||||||||  |||||||||||| | ||||||||||||||||  ||||| ||||||| | |||||||| |||  |||| ||    
T  41681723 aatttagaatagtttcctaagaatcttcttcaaaggtataaagtatggtcagataatcattgttattgcgcacaacgactagcacctcataactgtcatt 41681822  T
Q  340 aacttgatcatagccaaagccataat 365  Q
    ||||||||||||||||||||||||||    
T  41681823 aacttgatcatagccaaagccataat 41681848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 41681512 - 41681643
Alignment:
Q  75 actctatactctttcatcaaccatgcaacccaatgagttttgttnnnnnnncacacacaaagacaattactcaaaacataca---gcatatctttgcaca 171  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||       ||||||||||| | || ||||||||||| ||    |||||||||| | |    
T  41681512 actccatactctttcatcaaccacacaacccaatgagtcttgttcaaaaaacacacacaaaggcgatcactcaaaacatgcatattcatatctttgtata 41681611  T
Q  172 tgtagtcaccatcactttgaggcagcaacact 203  Q
     | ||||||| ||||||||||||| |||||||    
T  41681612 cgaagtcaccgtcactttgaggcaacaacact 41681643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 44668640 - 44668716
Alignment:
Q  42 gggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgtt 118  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||  |||||||||||||||||||    
T  44668640 gggatgatcatcagtttagtccatgactcaacaactccatactctttcatcatccacacaacccaatgagttttgtt 44668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 44687916 - 44687992
Alignment:
Q  42 gggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgtt 118  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||  |||||||||||||||||||    
T  44687916 gggatgatcatcagtttagtccatgactcaacaactccatactctttcatcatccacacaacccaatgagttttgtt 44687992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 45088954 - 45089030
Alignment:
Q  39 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 115  Q
    ||||||||||| |||||||||| ||| ||||||| ||||| |||||||||||||| |||  ||||||||||||||||    
T  45088954 tgagggatgattatcaatttagcccacgactcaataactccatactctttcatcatccacacaacccaatgagtttt 45089030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 45095418 - 45095469
Alignment:
Q  42 gggatgatcatcaatttagtccatgactcaacaactctatactctttcatca 93  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45095418 gggatgatcatcattttagtccatgactcaacaactccatactctttcatca 45095469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 333 - 366
Target Start/End: Original strand, 45095803 - 45095836
Alignment:
Q  333 tgtcgttaacttgatcatagccaaagccataata 366  Q
    ||||||||||||||||||||||||||||||||||    
T  45095803 tgtcgttaacttgatcatagccaaagccataata 45095836  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 44669009 - 44669062
Alignment:
Q  308 tgcacaactagtagcaccttatatttgtcgttaacttgatcatagccaaagcca 361  Q
    |||||||||  ||| ||||| ||  |||||||||||||||||||||||||||||    
T  44669009 tgcacaactgctaggaccttgtacctgtcgttaacttgatcatagccaaagcca 44669062  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 44688285 - 44688338
Alignment:
Q  308 tgcacaactagtagcaccttatatttgtcgttaacttgatcatagccaaagcca 361  Q
    |||||||||  ||| ||||| ||  |||||||||||||||||||||||||||||    
T  44688285 tgcacaactgctaggaccttgtacctgtcgttaacttgatcatagccaaagcca 44688338  T

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Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 43983344 - 43983408
Alignment:
Q  33 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 97  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  43983344 ttctcatgagggatgatcatgaatttagtccatgactcaacaactccatactctttcatcaacca 43983408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 44004751 - 44004827
Alignment:
Q  39 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 115  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||  ||  ||||||||||||    
T  44004751 tgagggatgatcatcaatttagtccatgactcagcaactccatactctttcatcatccacacagtccaatgagtttt 44004827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 43986159 - 43986212
Alignment:
Q  39 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatc 92  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  43986159 tgagggataatcatcaatttagtccatgactcaacaactccatactctttcatc 43986212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 43908480 - 43908406
Alignment:
Q  36 tcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatga 110  Q
    |||||||||||||| | ||||||||||||||||| | |||||| |||||||||||||| |||| ||| |||||||    
T  43908480 tcgtgagggatgataaacaatttagtccatgacttagcaactccatactctttcatcatccatacaatccaatga 43908406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 42414938 - 42414880
Alignment:
Q  40 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccat 98  Q
    ||||||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||||    
T  42414938 gagggatgatcatcaatttagtccaagactcagtaactccatactgtttcatcaaccat 42414880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 43917886 - 43917832
Alignment:
Q  39 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatca 93  Q
    |||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||    
T  43917886 tgagggatgatcatgaatttagtccatgactcaaaaactccacactctttcatca 43917832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 43990943 - 43991009
Alignment:
Q  41 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaa 107  Q
    |||||||||||||||||||||||||||||||| ||  | |||||||||||||| |||  ||||||||    
T  43990943 agggatgatcatcaatttagtccatgactcaataatgccatactctttcatcatccacacaacccaa 43991009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 23682441 - 23682390
Alignment:
Q  40 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcat 91  Q
    ||||||||||| |||||  ||||||||||||| |||||| ||||||||||||    
T  23682441 gagggatgatcgtcaatacagtccatgactcagcaactccatactctttcat 23682390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 43908174 - 43908127
Alignment:
Q  236 gggaaatttggaatagttttccaagaatcttcgccaaaggtataaatt 283  Q
    ||||||||||||| || ||||||||||| ||| |||||||||||||||    
T  43908174 gggaaatttggaagagatttccaagaattttcaccaaaggtataaatt 43908127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 43993934 - 43993973
Alignment:
Q  251 gttttccaagaatcttcgccaaaggtataaattttggtca 290  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  43993934 gttttccaagaattttcaccaaaggtataaattttggtca 43993973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 19567318 - 19567376
Alignment:
Q  33 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcat 91  Q
    ||||| |||| ||||||  ||||| |||||||||||||| |||||| ||||||||||||    
T  19567318 ttctcatgagagatgattgtcaatatagtccatgactcagcaactccatactctttcat 19567376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 43993626 - 43993675
Alignment:
Q  44 gatgatcatcaatttagtccatgactcaacaactctatactctttcatca 93  Q
    |||||| || ||||||||||||||||||| ||||| ||||| ||||||||    
T  43993626 gatgattatgaatttagtccatgactcaaaaactccatactatttcatca 43993675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 43986536 - 43986588
Alignment:
Q  310 cacaactagtagcaccttatatttgtcgttaacttgatcatagccaaagccat 362  Q
    |||||||| ||||||||| || |||||||||| ||| ||||||||||| ||||    
T  43986536 cacaactactagcaccttgtacttgtcgttaatttggtcatagccaaaaccat 43986588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 24002413 - 24002338
Alignment:
Q  39 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttt 114  Q
    |||||||||||  ||||||| |||||||||||||||||||  |||| |||||||| |||  |||||||||||||||    
T  24002413 tgagggatgattttcaattttgtccatgactcaacaactccgtactttttcatcatccacacaacccaatgagttt 24002338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 20596094 - 20596169
Alignment:
Q  40 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 115  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||   | |||||||||||||    
T  20596094 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaaccaaaaatcccaatgagtttt 20596169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 290
Target Start/End: Original strand, 20578413 - 20578467
Alignment:
Q  236 gggaaatttggaatagttttccaagaatcttcgccaaaggtataaattttggtca 290  Q
    |||||||||||||| |||||| ||||||  || ||||| ||||||||||||||||    
T  20578413 gggaaatttggaatggttttcaaagaattctcaccaaaagtataaattttggtca 20578467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 20575447 - 20575532
Alignment:
Q  33 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgtt 118  Q
    ||||| |||||||| ||||||||  ||||||| || ||| ||| || |||   |||||||||||||| |||| |||||||||||||    
T  20575447 ttctcatgagggatcatcatcaacctagtccaagattcagcaattccatatattttcatcaaccatgaaaccaaatgagttttgtt 20575532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 20585241 - 20585298
Alignment:
Q  40 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 97  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||    
T  20585241 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaacca 20585298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 20603568 - 20603625
Alignment:
Q  40 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 97  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||    
T  20603568 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaacca 20603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 20895461 - 20895404
Alignment:
Q  40 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 97  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||    
T  20895461 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaacca 20895404  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 42694165 - 42694112
Alignment:
Q  235 tgggaaatttggaatagttttccaagaatcttcgccaaaggtataaattttggt 288  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  42694165 tgggaaatttggaacagttttccaagaattttcaccaaaggtataaattctggt 42694112  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 42694465 - 42694391
Alignment:
Q  41 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 115  Q
    |||||||||||||||||||||||||||||||  ||||| ||| |  ||||||| |||| || |||||||| ||||    
T  42694465 agggatgatcatcaatttagtccatgactcagtaactccatattgattcatcatccatacaccccaatgattttt 42694391  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 42700151 - 42700091
Alignment:
Q  33 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatca 93  Q
    ||||| ||||| |||| |||||||||||||||||||||| |||||| ||| | ||||||||    
T  42700151 ttctcatgaggaatgaacatcaatttagtccatgactcagcaactccatattgtttcatca 42700091  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 24041718 - 24041790
Alignment:
Q  39 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgag 111  Q
    |||||||||||  ||| ||| ||||||||||||||||| || | || |||||||| |||  ||||||||||||    
T  24041718 tgagggatgattttcagttttgtccatgactcaacaacgctgttctttttcatcatccacacaacccaatgag 24041790  T

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