View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15762_high_14 (Length: 262)
Name: NF15762_high_14
Description: NF15762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15762_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 30357050 - 30357285
Alignment:
| Q |
11 |
cagagagagtatgtatatggcttataaattcatgtaaccaaaacaaatttgtttgataatatttttctcacaagtttgtnnnnnnnnnnnnnnnntcatt |
110 |
Q |
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| T |
30357050 |
cagagagagtatgtatatggcttataaattcatgtaaccaaaacaaatttgtttgataatatttttctcccaagtttgtaaaaaataaaataaaatcatt |
30357149 |
T |
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| Q |
111 |
tgcttaccgtgtttttgataagctgcaccaaataatgtttcgcgtttatagcttaccattttttctatcaattttacatttattatgttaattgaaagnn |
210 |
Q |
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||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30357150 |
tgcttaccgtgtttttgataagctgcatcaaataaagtttcgcgtttatagcttaccattttttctatcaattttacatttattatgttaattgaaag-a |
30357248 |
T |
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| Q |
211 |
nnnnnntattaattaaaaatattattatgtcatttat |
247 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
30357249 |
aaaaaatattaattaaaaatattattatgtcatttat |
30357285 |
T |
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