View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15762_low_20 (Length: 245)

Name: NF15762_low_20
Description: NF15762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15762_low_20
NF15762_low_20
[»] chr4 (58 HSPs)
chr4 (1-245)||(3096830-3097074)
chr4 (1-245)||(12902944-12903188)
chr4 (1-245)||(14052992-14053236)
chr4 (1-245)||(7089064-7089308)
chr4 (1-243)||(44053016-44053269)
chr4 (1-245)||(17047763-17048006)
chr4 (6-243)||(22636626-22636874)
chr4 (1-243)||(16377203-16377457)
chr4 (1-186)||(7893887-7894073)
chr4 (1-169)||(23374125-23374293)
chr4 (3-245)||(14038837-14039091)
chr4 (76-245)||(7798959-7799139)
chr4 (11-243)||(15091093-15091337)
chr4 (1-140)||(16239764-16239904)
chr4 (58-245)||(44928602-44928800)
chr4 (40-134)||(6190688-6190782)
chr4 (58-245)||(44102454-44102651)
chr4 (189-245)||(15552199-15552255)
chr4 (189-245)||(16597031-16597087)
chr4 (189-245)||(20156969-20157025)
chr4 (189-245)||(22633892-22633948)
chr4 (128-245)||(24029057-24029183)
chr4 (189-245)||(6190819-6190875)
chr4 (128-243)||(13812490-13812614)
chr4 (189-245)||(16239671-16239728)
chr4 (189-244)||(8846761-8846816)
chr4 (205-245)||(17046718-17046758)
chr4 (127-243)||(21814984-21815109)
chr4 (127-243)||(21815313-21815438)
chr4 (127-243)||(21818406-21818531)
chr4 (190-245)||(12774385-12774440)
chr4 (127-169)||(12774313-12774355)
chr4 (188-245)||(39705967-39706024)
chr4 (188-245)||(52242872-52242929)
chr4 (51-169)||(52242958-52243077)
chr4 (128-167)||(3332201-3332240)
chr4 (128-166)||(22633980-22634018)
chr4 (128-169)||(15099665-15099706)
chr4 (128-165)||(15552129-15552166)
chr4 (188-245)||(43198267-43198324)
chr4 (193-245)||(14685534-14685586)
chr4 (128-163)||(4561107-4561142)
chr4 (128-163)||(5756711-5756746)
chr4 (128-179)||(19757359-19757410)
chr4 (128-179)||(19782396-19782447)
chr4 (128-167)||(20157056-20157095)
chr4 (128-163)||(33742675-33742710)
chr4 (128-179)||(45938444-45938495)
chr4 (103-169)||(15464694-15464760)
chr4 (128-169)||(8846689-8846730)
chr4 (188-245)||(15099735-15099792)
chr4 (192-245)||(15464608-15464661)
chr4 (193-245)||(14679325-14679377)
chr4 (193-245)||(23838796-23838848)
chr4 (131-179)||(26243423-26243471)
chr4 (193-245)||(35170991-35171043)
chr4 (129-169)||(39706052-39706092)
chr4 (193-245)||(40471837-40471889)
[»] chr7 (59 HSPs)
chr7 (1-245)||(16385937-16386181)
chr7 (1-245)||(40443576-40443819)
chr7 (8-245)||(27847523-27847760)
chr7 (1-245)||(9509376-9509631)
chr7 (1-245)||(26212183-26212427)
chr7 (1-245)||(12699019-12699274)
chr7 (1-245)||(38227667-38227922)
chr7 (1-162)||(10589225-10589386)
chr7 (1-245)||(3564043-3564298)
chr7 (5-245)||(15143716-15143967)
chr7 (51-244)||(44116742-44116945)
chr7 (51-245)||(17061639-17061844)
chr7 (51-245)||(12756396-12756600)
chr7 (128-245)||(28504980-28505106)
chr7 (132-245)||(39267325-39267447)
chr7 (128-245)||(2831985-2832110)
chr7 (189-245)||(9751229-9751285)
chr7 (189-245)||(15754566-15754622)
chr7 (189-245)||(18302564-18302620)
chr7 (189-245)||(44014560-44014616)
chr7 (188-242)||(16324391-16324445)
chr7 (188-245)||(68131-68188)
chr7 (189-245)||(810808-810864)
chr7 (101-169)||(16056616-16056684)
chr7 (128-167)||(18302494-18302533)
chr7 (192-243)||(34201172-34201223)
chr7 (127-169)||(810894-810936)
chr7 (188-242)||(12255473-12255527)
chr7 (62-169)||(12255556-12255664)
chr7 (120-169)||(22073223-22073272)
chr7 (188-245)||(22073301-22073358)
chr7 (188-245)||(47832193-47832250)
chr7 (188-244)||(16056713-16056769)
chr7 (128-167)||(9389462-9389501)
chr7 (128-167)||(9751316-9751355)
chr7 (214-245)||(11995737-11995768)
chr7 (128-167)||(11995796-11995835)
chr7 (128-163)||(12718966-12719001)
chr7 (128-163)||(12723877-12723912)
chr7 (128-179)||(16438792-16438843)
chr7 (128-163)||(16906974-16907009)
chr7 (128-179)||(17137820-17137871)
chr7 (128-163)||(18279701-18279736)
chr7 (128-163)||(18283664-18283699)
chr7 (128-167)||(34201099-34201138)
chr7 (128-166)||(68061-68099)
chr7 (192-245)||(2279797-2279850)
chr7 (188-245)||(21064841-21064898)
chr7 (128-169)||(44014489-44014530)
chr7 (188-232)||(9389387-9389431)
chr7 (193-245)||(11262691-11262743)
chr7 (193-245)||(11547958-11548010)
chr7 (193-245)||(11554554-11554606)
chr7 (193-245)||(14148932-14148984)
chr7 (193-245)||(14953560-14953612)
chr7 (193-245)||(14959526-14959578)
chr7 (188-232)||(16219408-16219452)
chr7 (193-245)||(26420340-26420392)
chr7 (193-245)||(44408050-44408102)
[»] chr3 (75 HSPs)
chr3 (1-243)||(20698128-20698370)
chr3 (1-245)||(13442461-13442716)
chr3 (1-245)||(17488043-17488299)
chr3 (1-245)||(26687074-26687329)
chr3 (1-245)||(40213400-40213655)
chr3 (1-245)||(18438721-18438976)
chr3 (1-245)||(17499525-17499781)
chr3 (1-243)||(30030026-30030268)
chr3 (1-245)||(12399396-12399637)
chr3 (1-245)||(14572775-14573030)
chr3 (1-245)||(11424442-11424697)
chr3 (1-244)||(25476065-25476319)
chr3 (1-245)||(14576512-14576767)
chr3 (1-245)||(14973041-14973296)
chr3 (1-191)||(43841119-43841309)
chr3 (1-237)||(23083048-23083295)
chr3 (53-245)||(17247965-17248168)
chr3 (138-232)||(16809724-16809818)
chr3 (1-142)||(16796734-16796875)
chr3 (51-245)||(53070378-53070582)
chr3 (189-245)||(12340138-12340194)
chr3 (192-245)||(4588494-4588547)
chr3 (128-245)||(12852043-12852169)
chr3 (189-245)||(14179708-14179764)
chr3 (189-245)||(14665991-14666047)
chr3 (189-245)||(14669146-14669202)
chr3 (189-245)||(14735504-14735560)
chr3 (197-245)||(43842572-43842620)
chr3 (190-245)||(49389323-49389378)
chr3 (189-245)||(12933989-12934045)
chr3 (189-245)||(49667762-49667818)
chr3 (127-169)||(1644447-1644489)
chr3 (191-245)||(16104168-16104222)
chr3 (127-169)||(32307983-32308025)
chr3 (127-169)||(49667848-49667890)
chr3 (192-245)||(9513299-9513352)
chr3 (192-245)||(9521274-9521327)
chr3 (189-245)||(13210007-13210062)
chr3 (193-245)||(32308058-32308110)
chr3 (128-167)||(12340068-12340107)
chr3 (192-243)||(16097719-16097770)
chr3 (128-179)||(19725669-19725720)
chr3 (5-169)||(42386602-42386767)
chr3 (195-245)||(324627-324677)
chr3 (127-169)||(12934075-12934117)
chr3 (192-245)||(1644362-1644415)
chr3 (208-241)||(17247203-17247236)
chr3 (128-179)||(1598238-1598289)
chr3 (128-179)||(3833971-3834022)
chr3 (128-163)||(7109999-7110034)
chr3 (128-163)||(7113934-7113969)
chr3 (214-245)||(12171796-12171827)
chr3 (128-167)||(14665921-14665960)
chr3 (128-167)||(14669076-14669115)
chr3 (128-167)||(14735434-14735473)
chr3 (128-179)||(17242269-17242320)
chr3 (128-163)||(22321965-22322000)
chr3 (128-163)||(22337020-22337055)
chr3 (128-163)||(27409417-27409452)
chr3 (128-179)||(38814681-38814732)
chr3 (127-169)||(324549-324591)
chr3 (128-170)||(16097645-16097687)
chr3 (131-169)||(49389408-49389446)
chr3 (128-169)||(1465174-1465215)
chr3 (132-169)||(9513228-9513265)
chr3 (132-169)||(9521203-9521240)
chr3 (128-165)||(13210096-13210133)
chr3 (127-168)||(37250932-37250973)
chr3 (193-245)||(839609-839661)
chr3 (129-169)||(12171869-12171909)
chr3 (188-244)||(15471309-15471365)
chr3 (128-168)||(22110116-22110156)
chr3 (193-245)||(24188140-24188192)
chr3 (189-245)||(52523406-52523462)
chr3 (193-245)||(55149341-55149393)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-245)||(10116-10360)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-245)||(739-983)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-245)||(167669-167913)
scaffold0011 (1-245)||(52100-52354)
[»] scaffold0598 (1 HSPs)
scaffold0598 (7-245)||(742-980)
[»] chr2 (34 HSPs)
chr2 (8-237)||(20309299-20309528)
chr2 (1-245)||(37806-38050)
chr2 (1-243)||(23286048-23286290)
chr2 (1-245)||(23654089-23654320)
chr2 (1-245)||(298494-298748)
chr2 (1-245)||(27753762-27754017)
chr2 (6-245)||(32451608-32451858)
chr2 (1-245)||(22737859-22738114)
chr2 (2-245)||(23076630-23076882)
chr2 (1-245)||(22730912-22731168)
chr2 (1-242)||(22337302-22337554)
chr2 (1-245)||(23660209-23660464)
chr2 (128-245)||(23071642-23071768)
chr2 (1-118)||(23060700-23060815)
chr2 (193-245)||(22133896-22133948)
chr2 (53-169)||(23708383-23708500)
chr2 (199-245)||(28291981-28292027)
chr2 (192-245)||(28406368-28406421)
chr2 (129-172)||(22133977-22134020)
chr2 (128-179)||(22740717-22740768)
chr2 (188-245)||(25176227-25176284)
chr2 (128-163)||(12901286-12901321)
chr2 (128-179)||(22460948-22460999)
chr2 (128-163)||(24628252-24628287)
chr2 (128-163)||(24649654-24649689)
chr2 (128-163)||(27379206-27379241)
chr2 (128-163)||(27383252-27383287)
chr2 (128-163)||(27602094-27602129)
chr2 (128-163)||(41530783-41530818)
chr2 (131-169)||(28406297-28406335)
chr2 (129-170)||(25176158-25176199)
chr2 (193-245)||(24503473-24503525)
chr2 (193-245)||(27197248-27197300)
chr2 (128-164)||(31756232-31756268)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-245)||(13682-13926)
[»] chr6 (55 HSPs)
chr6 (1-245)||(20360650-20360894)
chr6 (1-245)||(20637973-20638217)
chr6 (40-245)||(18821509-18821714)
chr6 (8-242)||(22831696-22831930)
chr6 (8-245)||(16920323-16920560)
chr6 (11-245)||(11185699-11185933)
chr6 (1-245)||(22779906-22780161)
chr6 (1-245)||(18409506-18409761)
chr6 (1-245)||(29060727-29060982)
chr6 (1-245)||(17287475-17287730)
chr6 (1-245)||(19303220-19303475)
chr6 (1-245)||(25629034-25629289)
chr6 (1-245)||(20593960-20594215)
chr6 (127-245)||(28496152-28496280)
chr6 (127-245)||(29808562-29808691)
chr6 (58-245)||(18456959-18457156)
chr6 (189-245)||(1561689-1561745)
chr6 (128-245)||(21939699-21939825)
chr6 (189-245)||(19652581-19652637)
chr6 (128-177)||(25611481-25611530)
chr6 (128-179)||(15894186-15894237)
chr6 (189-245)||(4189342-4189398)
chr6 (189-245)||(4667892-4667948)
chr6 (189-245)||(4674739-4674795)
chr6 (189-245)||(15894109-15894165)
chr6 (189-245)||(22334561-22334617)
chr6 (189-245)||(25603064-25603120)
chr6 (1-177)||(25603143-25603319)
chr6 (189-245)||(25611402-25611458)
chr6 (189-245)||(31155077-31155133)
chr6 (128-179)||(22334648-22334699)
chr6 (128-179)||(25641940-25641991)
chr6 (189-242)||(4185505-4185558)
chr6 (128-169)||(4185588-4185629)
chr6 (128-169)||(4667978-4668019)
chr6 (128-169)||(22080502-22080543)
chr6 (188-245)||(23019792-23019849)
chr6 (129-169)||(27333049-27333089)
chr6 (129-169)||(27393789-27393829)
chr6 (193-245)||(31164537-31164589)
chr6 (128-163)||(8244158-8244193)
chr6 (128-163)||(11567160-11567195)
chr6 (128-179)||(12496605-12496656)
chr6 (130-169)||(19652512-19652551)
chr6 (128-163)||(19870888-19870923)
chr6 (128-163)||(22863243-22863278)
chr6 (128-163)||(23395366-23395401)
chr6 (189-243)||(27332965-27333019)
chr6 (189-243)||(27393705-27393759)
chr6 (128-173)||(16924642-16924687)
chr6 (128-173)||(16929357-16929402)
chr6 (128-169)||(31155163-31155204)
chr6 (128-168)||(19668688-19668728)
chr6 (193-245)||(22331803-22331855)
chr6 (128-168)||(23657189-23657229)
[»] chr5 (51 HSPs)
chr5 (1-245)||(21292660-21292904)
chr5 (1-241)||(8286536-8286776)
chr5 (2-245)||(22107063-22107306)
chr5 (1-245)||(22075206-22075450)
chr5 (1-245)||(13095681-13095936)
chr5 (1-245)||(24529407-24529663)
chr5 (1-245)||(23390175-23390430)
chr5 (1-245)||(13025497-13025752)
chr5 (1-245)||(21985826-21986081)
chr5 (1-245)||(24493755-24494010)
chr5 (1-245)||(9078139-9078394)
chr5 (1-245)||(25421719-25421974)
chr5 (1-245)||(25431581-25431836)
chr5 (1-245)||(1096654-1096909)
chr5 (51-245)||(11580924-11581129)
chr5 (51-242)||(36154510-36154712)
chr5 (128-245)||(22119872-22119998)
chr5 (189-245)||(19660516-19660572)
chr5 (189-245)||(21565930-21565986)
chr5 (189-245)||(21871250-21871306)
chr5 (189-245)||(21875530-21875586)
chr5 (128-245)||(24767016-24767142)
chr5 (190-245)||(22959212-22959267)
chr5 (58-245)||(22144294-22144492)
chr5 (189-243)||(19669286-19669340)
chr5 (128-169)||(5888940-5888981)
chr5 (128-165)||(19660606-19660643)
chr5 (188-245)||(21498696-21498753)
chr5 (120-169)||(21501919-21501968)
chr5 (132-169)||(21565863-21565900)
chr5 (128-169)||(22959298-22959339)
chr5 (127-167)||(20026706-20026746)
chr5 (128-163)||(19472493-19472528)
chr5 (128-163)||(20296145-20296180)
chr5 (128-179)||(21340525-21340576)
chr5 (128-179)||(23201680-23201731)
chr5 (128-179)||(23535347-23535398)
chr5 (128-179)||(24532806-24532857)
chr5 (128-179)||(26665889-26665940)
chr5 (128-179)||(26937486-26937537)
chr5 (128-167)||(31342414-31342453)
chr5 (194-245)||(41294125-41294176)
chr5 (128-166)||(25744036-25744074)
chr5 (128-177)||(20232847-20232896)
chr5 (188-245)||(21329174-21329231)
chr5 (132-169)||(21741308-21741345)
chr5 (128-168)||(123074-123114)
chr5 (193-245)||(21294954-21295006)
chr5 (128-184)||(21871321-21871377)
chr5 (128-184)||(21875601-21875657)
chr5 (193-245)||(25535351-25535403)
[»] scaffold0235 (1 HSPs)
scaffold0235 (3-245)||(11203-11445)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-237)||(15163-15399)
[»] chr8 (42 HSPs)
chr8 (1-245)||(31971442-31971686)
chr8 (1-245)||(21918689-21918934)
chr8 (1-245)||(16199337-16199580)
chr8 (1-243)||(25362832-25363074)
chr8 (8-245)||(18878916-18879164)
chr8 (1-245)||(20536395-20536650)
chr8 (1-243)||(21923609-21923862)
chr8 (1-245)||(18818089-18818343)
chr8 (1-245)||(45130710-45130932)
chr8 (61-245)||(23406628-23406823)
chr8 (1-245)||(28648723-28648978)
chr8 (1-245)||(22626922-22627177)
chr8 (1-243)||(23648740-23648993)
chr8 (5-242)||(6759447-6759696)
chr8 (5-242)||(16092023-16092271)
chr8 (5-240)||(22875256-22875502)
chr8 (51-245)||(41598421-41598626)
chr8 (1-245)||(7372957-7373191)
chr8 (128-245)||(5865956-5866082)
chr8 (189-240)||(21255605-21255656)
chr8 (192-245)||(17141302-17141355)
chr8 (193-245)||(21491382-21491434)
chr8 (189-240)||(21249767-21249818)
chr8 (189-245)||(21674091-21674147)
chr8 (188-245)||(19801106-19801163)
chr8 (189-245)||(26355377-26355433)
chr8 (128-165)||(17141229-17141266)
chr8 (128-165)||(21249697-21249734)
chr8 (188-245)||(38854930-38854987)
chr8 (128-169)||(39834147-39834188)
chr8 (188-244)||(23760520-23760576)
chr8 (128-179)||(15538745-15538796)
chr8 (128-179)||(24433995-24434046)
chr8 (128-163)||(43252110-43252145)
chr8 (188-230)||(39834217-39834259)
chr8 (128-165)||(21255535-21255572)
chr8 (193-245)||(20527812-20527864)
chr8 (129-169)||(21674021-21674061)
chr8 (128-168)||(21972353-21972393)
chr8 (128-168)||(21976438-21976478)
chr8 (128-168)||(37116664-37116704)
chr8 (129-169)||(38855015-38855055)
[»] scaffold0032 (1 HSPs)
scaffold0032 (8-245)||(51773-52010)
[»] chr1 (41 HSPs)
chr1 (8-245)||(38801081-38801318)
chr1 (1-245)||(27250419-27250663)
chr1 (1-242)||(21026867-21027108)
chr1 (3-245)||(20846909-20847151)
chr1 (1-245)||(22355864-22356108)
chr1 (1-245)||(22357550-22357794)
chr1 (1-245)||(50209892-50210147)
chr1 (1-242)||(22354254-22354506)
chr1 (1-245)||(34509967-34510222)
chr1 (1-245)||(22532456-22532711)
chr1 (1-242)||(20135374-20135626)
chr1 (51-243)||(433244-433447)
chr1 (128-245)||(20918917-20919043)
chr1 (105-244)||(33681301-33681450)
chr1 (189-245)||(52927660-52927716)
chr1 (190-245)||(20248664-20248719)
chr1 (127-169)||(21754350-21754392)
chr1 (191-245)||(21754423-21754477)
chr1 (188-245)||(22921546-22921603)
chr1 (189-245)||(22238015-22238071)
chr1 (128-179)||(20091230-20091281)
chr1 (192-245)||(20091153-20091206)
chr1 (128-169)||(20637165-20637206)
chr1 (128-169)||(21162080-21162121)
chr1 (192-245)||(21162117-21162170)
chr1 (128-179)||(12647166-12647217)
chr1 (128-163)||(16375231-16375266)
chr1 (128-163)||(21407653-21407688)
chr1 (128-163)||(52639839-52639874)
chr1 (128-169)||(20248592-20248633)
chr1 (129-170)||(22921631-22921672)
chr1 (127-168)||(26065254-26065295)
chr1 (128-169)||(28194213-28194254)
chr1 (128-169)||(35981451-35981492)
chr1 (129-170)||(52927745-52927786)
chr1 (53-101)||(16758890-16758938)
chr1 (193-245)||(20524906-20524958)
chr1 (217-245)||(21301217-21301245)
chr1 (193-245)||(21438157-21438209)
chr1 (193-245)||(23763574-23763626)
chr1 (128-168)||(45310135-45310175)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-245)||(32251-32495)
[»] scaffold0309 (1 HSPs)
scaffold0309 (7-245)||(6803-7041)
[»] scaffold0490 (1 HSPs)
scaffold0490 (40-245)||(2178-2383)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-245)||(122-367)
scaffold0358 (1-245)||(4898-5143)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-245)||(13398-13642)
[»] scaffold0165 (2 HSPs)
scaffold0165 (1-245)||(3668-3912)
scaffold0165 (1-245)||(7732-7976)
[»] scaffold0351 (1 HSPs)
scaffold0351 (8-245)||(16473-16710)
[»] scaffold0305 (1 HSPs)
scaffold0305 (6-245)||(20595-20845)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-245)||(1101-1345)
[»] scaffold0064 (1 HSPs)
scaffold0064 (40-243)||(47212-47415)
[»] scaffold0718 (1 HSPs)
scaffold0718 (43-245)||(4821-5023)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-245)||(38947-39201)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-245)||(124772-125024)
scaffold0021 (189-242)||(62947-63000)
scaffold0021 (127-168)||(136132-136173)
scaffold0021 (127-168)||(144840-144881)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-243)||(3657-3910)
scaffold0292 (1-245)||(529-784)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-245)||(23981-24235)
scaffold0042 (128-179)||(64150-64201)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-242)||(5036-5276)
[»] scaffold0034 (3 HSPs)
scaffold0034 (6-245)||(51563-51813)
scaffold0034 (188-245)||(32921-32978)
scaffold0034 (103-169)||(32826-32892)
[»] scaffold0106 (2 HSPs)
scaffold0106 (8-245)||(1480-1717)
scaffold0106 (8-245)||(7457-7694)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-245)||(13279-13534)
scaffold0175 (129-245)||(34437-34562)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-245)||(2038-2293)
scaffold0016 (128-245)||(207198-207324)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-245)||(5800-6055)
[»] scaffold0639 (1 HSPs)
scaffold0639 (4-245)||(8665-8917)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-245)||(21098-21332)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-245)||(16894-17149)
scaffold0056 (190-242)||(79044-79096)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-245)||(339630-339884)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-245)||(25744-25999)
scaffold0122 (1-245)||(33173-33429)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-245)||(8211-8467)
[»] scaffold0080 (2 HSPs)
scaffold0080 (4-245)||(40102-40353)
scaffold0080 (128-179)||(18413-18464)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-245)||(23069-23324)
[»] scaffold0026 (7 HSPs)
scaffold0026 (1-245)||(40044-40298)
scaffold0026 (1-131)||(26082-26213)
scaffold0026 (189-240)||(26611-26662)
scaffold0026 (189-244)||(39611-39666)
scaffold0026 (192-245)||(59182-59235)
scaffold0026 (128-165)||(59271-59308)
scaffold0026 (143-177)||(26555-26589)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-245)||(4694-4950)
scaffold0228 (1-245)||(12276-12532)
scaffold0228 (1-245)||(22228-22484)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-245)||(16278-16534)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-245)||(17687-17921)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-245)||(641-897)
[»] scaffold0120 (5 HSPs)
scaffold0120 (58-245)||(16331-16529)
scaffold0120 (51-164)||(32729-32843)
scaffold0120 (51-164)||(46162-46276)
scaffold0120 (192-243)||(32640-32691)
scaffold0120 (192-243)||(46314-46365)
[»] scaffold0627 (1 HSPs)
scaffold0627 (92-245)||(182-346)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-173)||(39663-39836)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-173)||(74976-75149)
[»] scaffold0130 (2 HSPs)
scaffold0130 (1-175)||(28017-28192)
scaffold0130 (191-244)||(28924-28977)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-175)||(10350-10525)
[»] scaffold0839 (1 HSPs)
scaffold0839 (65-245)||(1756-1947)
[»] scaffold0389 (1 HSPs)
scaffold0389 (149-245)||(13287-13383)
[»] scaffold0540 (2 HSPs)
scaffold0540 (110-245)||(692-837)
scaffold0540 (1-99)||(2987-3085)
[»] scaffold0142 (3 HSPs)
scaffold0142 (58-245)||(17024-17222)
scaffold0142 (189-224)||(7471-7506)
scaffold0142 (128-167)||(7537-7576)
[»] scaffold0100 (1 HSPs)
scaffold0100 (127-245)||(20426-20554)
[»] scaffold0876 (1 HSPs)
scaffold0876 (189-245)||(2764-2820)
[»] scaffold0347 (1 HSPs)
scaffold0347 (128-245)||(344-470)
[»] scaffold0266 (1 HSPs)
scaffold0266 (189-245)||(18637-18693)
[»] scaffold0413 (1 HSPs)
scaffold0413 (123-245)||(15294-15426)
[»] scaffold0070 (3 HSPs)
scaffold0070 (40-162)||(4749-4872)
scaffold0070 (128-179)||(10200-10251)
scaffold0070 (192-245)||(4912-4965)
[»] scaffold0221 (1 HSPs)
scaffold0221 (131-245)||(12488-12611)
[»] scaffold0247 (2 HSPs)
scaffold0247 (104-168)||(6561-6625)
scaffold0247 (195-245)||(6507-6557)
[»] scaffold0161 (1 HSPs)
scaffold0161 (128-245)||(2124-2250)
[»] scaffold0075 (2 HSPs)
scaffold0075 (189-245)||(7973-8029)
scaffold0075 (128-165)||(8062-8099)
[»] scaffold0037 (1 HSPs)
scaffold0037 (128-245)||(80011-80137)
[»] scaffold0503 (1 HSPs)
scaffold0503 (51-243)||(12166-12368)
[»] scaffold0031 (1 HSPs)
scaffold0031 (131-244)||(20106-20228)
[»] scaffold0218 (1 HSPs)
scaffold0218 (193-245)||(28959-29011)
[»] scaffold0192 (1 HSPs)
scaffold0192 (128-245)||(10226-10352)
[»] scaffold1984 (2 HSPs)
scaffold1984 (120-169)||(437-486)
scaffold1984 (189-245)||(516-572)
[»] scaffold0261 (2 HSPs)
scaffold0261 (192-245)||(16047-16100)
scaffold0261 (128-165)||(15974-16011)
[»] scaffold0556 (2 HSPs)
scaffold0556 (189-245)||(7197-7253)
scaffold0556 (128-169)||(7126-7167)
[»] scaffold0166 (1 HSPs)
scaffold0166 (128-245)||(9513-9639)
[»] scaffold0150 (2 HSPs)
scaffold0150 (189-245)||(32469-32525)
scaffold0150 (127-169)||(32397-32439)
[»] scaffold0124 (1 HSPs)
scaffold0124 (128-245)||(24330-24456)
[»] scaffold0028 (3 HSPs)
scaffold0028 (189-245)||(133039-133095)
scaffold0028 (127-169)||(132967-133009)
scaffold0028 (128-163)||(58492-58527)
[»] scaffold0151 (1 HSPs)
scaffold0151 (199-242)||(10540-10583)
[»] scaffold0023 (2 HSPs)
scaffold0023 (190-245)||(101781-101836)
scaffold0023 (127-171)||(101709-101753)
[»] scaffold0001 (1 HSPs)
scaffold0001 (190-245)||(161072-161127)
[»] scaffold0810 (1 HSPs)
scaffold0810 (188-245)||(3317-3374)
[»] scaffold0102 (2 HSPs)
scaffold0102 (120-169)||(19573-19622)
scaffold0102 (189-245)||(19652-19708)
[»] scaffold0211 (2 HSPs)
scaffold0211 (193-245)||(28488-28540)
scaffold0211 (127-169)||(28574-28616)
[»] scaffold0207 (1 HSPs)
scaffold0207 (190-245)||(2323-2378)
[»] scaffold1137 (2 HSPs)
scaffold1137 (195-243)||(1982-2030)
scaffold1137 (127-169)||(2066-2108)
[»] scaffold0628 (2 HSPs)
scaffold0628 (192-244)||(2483-2535)
scaffold0628 (127-169)||(2567-2609)
[»] scaffold0475 (2 HSPs)
scaffold0475 (189-245)||(9462-9518)
scaffold0475 (128-169)||(9391-9432)
[»] scaffold0320 (1 HSPs)
scaffold0320 (188-243)||(12380-12435)
[»] scaffold0125 (2 HSPs)
scaffold0125 (191-245)||(45468-45522)
scaffold0125 (128-169)||(45555-45596)
[»] scaffold0621 (1 HSPs)
scaffold0621 (188-245)||(6922-6979)
[»] scaffold0278 (1 HSPs)
scaffold0278 (188-245)||(5978-6035)
[»] scaffold0138 (4 HSPs)
scaffold0138 (188-245)||(13325-13382)
scaffold0138 (128-169)||(13255-13296)
scaffold0138 (193-245)||(29898-29950)
scaffold0138 (193-245)||(41894-41946)
[»] scaffold0116 (2 HSPs)
scaffold0116 (188-245)||(43463-43520)
scaffold0116 (188-245)||(47383-47440)
[»] scaffold0078 (2 HSPs)
scaffold0078 (188-245)||(10913-10970)
scaffold0078 (127-169)||(10842-10884)
[»] scaffold0012 (2 HSPs)
scaffold0012 (188-245)||(227877-227934)
scaffold0012 (51-101)||(225644-225694)
[»] scaffold0010 (3 HSPs)
scaffold0010 (128-169)||(130222-130263)
scaffold0010 (127-168)||(60479-60520)
scaffold0010 (188-245)||(130292-130349)
[»] scaffold0530 (1 HSPs)
scaffold0530 (197-245)||(707-755)
[»] scaffold0555 (3 HSPs)
scaffold0555 (132-179)||(897-944)
scaffold0555 (127-169)||(10305-10347)
scaffold0555 (189-241)||(965-1017)
[»] scaffold0372 (1 HSPs)
scaffold0372 (128-163)||(4875-4910)
[»] scaffold0210 (2 HSPs)
scaffold0210 (128-179)||(21563-21614)
scaffold0210 (128-179)||(29455-29506)
[»] scaffold0029 (2 HSPs)
scaffold0029 (128-163)||(61386-61421)
scaffold0029 (128-161)||(65304-65337)
[»] scaffold0507 (1 HSPs)
scaffold0507 (127-169)||(7822-7864)
[»] scaffold0357 (1 HSPs)
scaffold0357 (51-166)||(15866-15983)
[»] scaffold0243 (1 HSPs)
scaffold0243 (194-244)||(5802-5852)
[»] scaffold0020 (1 HSPs)
scaffold0020 (188-245)||(15509-15566)
[»] scaffold0370 (1 HSPs)
scaffold0370 (193-245)||(17423-17475)
[»] scaffold0184 (1 HSPs)
scaffold0184 (128-168)||(3993-4033)
[»] scaffold0044 (1 HSPs)
scaffold0044 (127-163)||(62556-62592)
[»] scaffold0022 (1 HSPs)
scaffold0022 (128-168)||(128735-128775)
[»] scaffold0017 (1 HSPs)
scaffold0017 (127-163)||(192757-192793)
[»] scaffold0004 (1 HSPs)
scaffold0004 (193-245)||(58109-58161)


Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 3096830 - 3097074
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||||||| | | |||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3096830 tcttaaacagcttcacatattataattaacctcatcattaagtatttatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 3096929  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  3096930 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 3097029  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3097030 tctcatcctacattctttcctaatcattattagacatgttcaggc 3097074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12902944 - 12903188
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||||||  | | |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  12902944 tcttaaacagcttcacagattataattaacctcttcattaagtcttaatcctacccaaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaat 12903043  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12903044 ctaacaaggcactctgtttctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 12903143  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12903144 tctcatcctacattctttcctaatcattattagacatgttcaggc 12903188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 14053236 - 14052992
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| || ||||||||||||||| |||||||||   | ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  14053236 tcttatacggcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 14053137  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  14053136 ctaacaagtcactctgtttctgggtcactcgcaaggcgagagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaattccaagttcaa 14053037  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  14053036 tctcatcctacattctttcctaatcattattagacatattcaggc 14052992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7089064 - 7089308
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| |||||||||||||| ||||||||  | | |||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  7089064 tcttaaacaacttcacagattataattaacctcttcattaagtcttaatgctactcaaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaat 7089163  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  7089164 ctaacaagacactctgtttccgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccataagtttcattccaggttcaa 7089263  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7089264 tctcatcctacattctttcctaatcattattagacatgttcaggc 7089308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 44053016 - 44053269
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  44053016 tcttaaacagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 44053115  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |           |    
T  44053116 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagtctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatcctataatctt 44053215  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44053216 tacaggttcaatctcatcctacattctttcccaatcattattagacatgttcag 44053269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17048006 - 17047763
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||| || || |||  |||  | | |||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |    
T  17048006 tcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaagt 17047907  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    || ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  17047906 ctcacaaggcactctgtttccgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattcca-gttcaa 17047808  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| |||||||||||||||||| |||||||||||    
T  17047807 tctcatcctacattttttcctaatcattattagtcatgttcaggc 17047763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 22636626 - 22636874
Alignment:
Q  6 aacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaac 105  Q
    ||||||||||||||||||| ||||| ||  | | |||||||||| |||||| ||||||||| |||| || |||||||||||||||||||||||| |||||    
T  22636626 aacagcttcacagattataattaacatcctcgttaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaac 22636725  T
Q  106 aagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccag 194  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |           ||||||    
T  22636726 aagacactctgtttctgggtcactcgtgaggcgagagcctctgctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttccag 22636825  T
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22636826 gttcaatctcatcctacattctttcctaatcattattagacatcttcag 22636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 16377457 - 16377203
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcg-accactcgtgcaacaaaggtcgcaaaa 99  Q
    |||||||||||| ||||||||||| ||||| ||| | | |||||| ||| |||||| ||||||||||||||  |  ||||||||||||||||| ||||||    
T  16377457 tcttaaacagctccacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactctcataaaactcgtgcaacaaaggtagcaaaa 16377358  T
Q  100 tc-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taa 188  Q
    || ||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||          | |    
T  16377357 tcctaacaaggcactatgtttctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatca 16377258  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16377257 ttccaggttcaatctcatcctacattatttcctaatcattattagacatgttcag 16377203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 7893887 - 7894073
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | ||||||||||  ||||| ||||||||||||||| | |||| |||||||||||||||||||     
T  7893887 tcttaaacagcttcacagattataattaacatcatcgttaagtcttaatattaccccaaggttcaactctcggcaactcatgcaacaaaggtcgcaaaaa 7893986  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttt 186  Q
    | ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7893987 cctaacaagactctctgtttctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttt 7894073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23374293 - 23374125
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| ||||||| |||||||||||||||||  | | |||||||||| ||||||||||||| ||  ||| || ||||||||||||||||| |||||||    
T  23374293 tcttaaaaagcttcagagattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggttgcaaaat 23374194  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23374193 ctaacaagtcactctgtttctgggtcacccgcgaggcgagagcctctgctcgccgtggcgagttcaggt 23374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 245
Target Start/End: Original strand, 14038837 - 14039091
Alignment:
Q  3 ttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc- 101  Q
    |||||||||||||||||||||| ||||  ||| | | |||||| ||| |||||| |||||||||||||   | ||| |||| ||| || ||||||||||     
T  14038837 ttaaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcc 14038936  T
Q  102 taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------tt 190  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |||||| |           ||    
T  14038937 taacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatcttt 14039036  T
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  14039037 ctaggttcaatctcattctacattctttccaaatcattattagacatgttcaggc 14039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 76 - 245
Target Start/End: Original strand, 7798959 - 7799139
Alignment:
Q  76 actcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 175  Q
    ||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7798959 actcgtgaaacaaaggtcgcaaaacctaacaagacactttgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 7799058  T
Q  176 cccacaagtttaa-----------ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     | |||||||| |           |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  7799059 actacaagtttcattctacaaactttccaggttcaatctcatcctacattatgtcctaatcattattagtcatgttcaggc 7799139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 15091093 - 15091337
Alignment:
Q  11 cttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-taacaagt 109  Q
    |||||||||||||| ||||| ||  | | |||||| ||| |||||| |||||||||||||     ||| |||| ||| || |||||||||| |||||||     
T  15091093 cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaagg 15091192  T
Q  110 cactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccaggttc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |           ||||||||||    
T  15091193 cactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttc 15091292  T
Q  199 aatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  15091293 aatctcattctacattctttcctaatcaatattagacatgttcag 15091337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16239904 - 16239764
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgc-aaaa 99  Q
    |||||||||||||| ||||||||| ||||| ||| | | |||||||||| |||||| || ||||||||||| || |||||||||||||||||||| ||||    
T  16239904 tcttaaacagcttcgcagattataattaacatcatcattaagtcttaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 16239805  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgag 140  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  16239804 cctaacaagtcactctgtttctgggtcactcgcgaggcgag 16239764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 245
Target Start/End: Complemental strand, 44928800 - 44928602
Alignment:
Q  58 aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 155  Q
    |||||||||||||| || |||||||| |||||| ||||||||||   |||||| || |||||  |||||||||||||||||||||||||||||||||||     
T  44928800 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgcca 44928702  T
Q  156 tggcgagttcaggtcagaatcccacaagtttaa-----------ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||| ||||||| ||||| |||||| |           |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44928701 tggcgagttctggtcagattccca-aagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagatatgttcagg 44928603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 6190688 - 6190782
Alignment:
Q  40 aagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcga 134  Q
    |||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  6190688 aagtcttaatgctacgccaaggttcaactctcgacagctcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttttgggtcactcgcga 6190782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 44102454 - 44102651
Alignment:
Q  58 aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 155  Q
    |||||||||||||| || |||||||| |||||| ||||||||||   ||||||| | |||||   | ||||||||||||||||||||||||||||||||     
T  44102454 aaggttcaactctcaacgactcgtgctacaaagatcgcaaaatcctaaacaagt-attctgtaaataggtcactcgcgaggcgagagcctctgctcgcca 44102552  T
Q  156 tggcgagttcaggtcagaatcccacaagtttaat-----------tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||||||||| || || |||||| ||           |||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||    
T  44102553 tggcgagttcaggtcagattctca-aagttttattctaaaatctatccaggttcaatctcatcctacattc-ttcataatcattattaaacatgctcagg 44102650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 15552199 - 15552255
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggc 15552255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 16597031 - 16597087
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 16597087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 20157025 - 20156969
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20157025 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggc 20156969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 22633948 - 22633892
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22633948 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggc 22633892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 24029057 - 24029183
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  |||||| ||||          ||||||||||||||||||||||||||    
T  24029057 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattctt 24029155  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    || |||||| ||||||||||||||||||    
T  24029156 tcataatcaatattagacatgttcaggc 24029183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 6190819 - 6190875
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggc 6190875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 13812614 - 13812490
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| || |  |||||| |          |||||||||||||||||||||||||| ||    
T  13812614 ctcgcgaggcgagagcctctgctcgccatggcgagttta-gtcagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattatt 13812516  T
Q  218 tcctaatcattattagacatgttcag 243  Q
    ||||||||| ||||||||||||||||    
T  13812515 tcctaatcaatattagacatgttcag 13812490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 16239728 - 16239671
Alignment:
Q  189 ttccaggttcaatctcatcctacatt-ctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  16239728 ttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggc 16239671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 8846761 - 8846816
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||||||||    
T  8846761 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcagg 8846816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 17046718 - 17046758
Alignment:
Q  205 atcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17046718 atcctacattctttcctaatcattattagacatgttcaggc 17046758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 21815109 - 21814984
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt------taatt---ccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||  ||| | |||||      |||||   ||||||||| | |||| ||| ||||||    
T  21815109 actcgcgaggcgagagcctctactcgccatggcgagttcaagtcagcttccaaaaagttcattcttaattaatccaggttcattatcattctaaattctt 21815010  T
Q  218 tcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| ||||||||||    
T  21815009 tcctaatcattattaaacatgttcag 21814984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 21815438 - 21815313
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagt------ttaat---tccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||  ||| | ||||      |||||   |||||||||| | |||| ||| ||| ||    
T  21815438 actcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcattatcattctaaattatt 21815339  T
Q  218 tcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| ||||||||||    
T  21815338 tcctaatcattattaaacatgttcag 21815313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 21818531 - 21818406
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt------taatt---ccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||  ||| | |||||      |||||   ||||||||| | |||| ||| ||||||    
T  21818531 actcgcgaggcgagagcctctactcgccatggcgagttcaagtcagcttccaaaaagttcattcttaattaatccaggttcattatcattctaaattctt 21818432  T
Q  218 tcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| ||||||||||    
T  21818431 tcctaatcattattaaacatgttcag 21818406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 12774385 - 12774440
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||    
T  12774385 tccaggttcaatctcattctccaatcttttctaatcattattagacatgttcaggc 12774440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 12774313 - 12774355
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  12774313 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 12774355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 39706024 - 39705967
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||| |  || || ||||||||||||||||||||||||||||||||    
T  39706024 attccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggc 39705967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 52242929 - 52242872
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||| ||||||||||||    
T  52242929 attccaggttcaatctcattctagaatctttcctgatcattattatacatgttcaggc 52242872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 52243077 - 52242958
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| || ||||||||||  || |||||||| |||||| ||||||||||   |||||| || |||||  |||||  |||||||||||||||||||||     
T  52243077 ctaccccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctcta 52242979  T
Q  149 ctcgccgtggcgagttcaggt 169  Q
    |||||  ||||||||||||||    
T  52242978 ctcgctatggcgagttcaggt 52242958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 3332201 - 3332240
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  3332201 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 3332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 22634018 - 22633980
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 166  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  22634018 ctcgcgaggcgagagcctctgctcgccatggcgagttca 22633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 15099665 - 15099706
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  15099665 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 15099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 15552129 - 15552166
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  15552129 ctcgcgaggcgcgagcctctgctcgccgtggcgagttc 15552166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 43198324 - 43198267
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||| |||||||||||  ||| | ||||||||||||||||||| ||||||||||||    
T  43198324 attccatgttcaatctcaatctaaaatctttcctaatcattattacacatgttcaggc 43198267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14685534 - 14685586
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||| ||||||||||| ||||||||||||| |||  ||||||||||    
T  14685534 aggttcaatcttatcctacattcattcctaatcattactaggtatgttcaggc 14685586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 4561142 - 4561107
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  4561142 ctcgcgaggcgagagcatctgctcgccgtggcgagt 4561107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 5756746 - 5756711
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  5756746 ctcgcgaggcgagagcatctgctcgccgtggcgagt 5756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 19757410 - 19757359
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  19757410 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 19757359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 19782396 - 19782447
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  19782396 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 19782447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 20157095 - 20157056
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  20157095 ctcgcgaggcgagagcctctgcacgccatggcgagttcag 20157056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 33742675 - 33742710
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  33742675 ctcgcgaggcgagagcatctgctcgccgtggcgagt 33742710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 45938444 - 45938495
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  45938444 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 45938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 15464760 - 15464694
Alignment:
Q  103 aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||| |||||  |||||  ||||||||||||||||||||| |||||  ||| ||||||||||    
T  15464760 aacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggt 15464694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 8846689 - 8846730
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||| ||||    
T  8846689 ctcgcgaggcgagagcctctactcgccatggcgagttaaggt 8846730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 15099735 - 15099792
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||||| |||||||||||||| || | ||| ||||||||    
T  15099735 attccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggc 15099792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 15464661 - 15464608
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||  ||| | ||||||||||||||||||| |||| |||||||    
T  15464661 caggttcaatctcaatctaaaatctttcctaatcattattatacatattcaggc 15464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14679325 - 14679377
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  14679325 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 14679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 23838796 - 23838848
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  23838796 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 23838848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 26243471 - 26243423
Alignment:
Q  131 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    ||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  26243471 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 26243423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 35170991 - 35171043
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  35170991 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 35171043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 39706092 - 39706052
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  39706092 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 39706052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 40471837 - 40471889
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||| ||||||||||| |||||||||| || |||  ||||||||||    
T  40471837 aggttcaatctgatcctacattcattcctaatcaatactaggtatgttcaggc 40471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 16386181 - 16385937
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||||||||||||  | | ||||||||||  ||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  16386181 tcttaaacagcttcacagattatagttaacctcttcattaagtcttaatgttacccaaaggttcaactctggacaactcatgcaacaaaggtcgcaaaat 16386082  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16386081 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagccactgctcgccgtggcgagttcaggttagaatcccacaagtttaattccaggttcaa 16385982  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16385981 tctcatcctacattctttcctaatcattattagacatgttcaggc 16385937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 40443576 - 40443819
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| |||||||||   | ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  40443576 tcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcatctctcgacaactcgtgcaacaaaggtcgcaaaat 40443675  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40443676 ccaataagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaag-ttaattccaggttcaa 40443774  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  40443775 tctcatcctaaattctttcctaatcattattagacatgttcaggc 40443819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 27847760 - 27847523
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||||||||||||||||| ||||   | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27847760 cagcttcacagattatagttaatctcattattaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaa 27847661  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  27847660 gtcactctgtttttgggtcactcgcgaggcgagagcctctgcttgccgtggcgagttcaggtcaaaatcccataagtttaattccaggttcaatctcatc 27847561  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  27847560 ctaaattctttcctaatcataattagacatgttcaggc 27847523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9509376 - 9509631
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||||||||    
T  9509376 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaat 9509475  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |           |    
T  9509476 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 9509575  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9509576 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 9509631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26212183 - 26212427
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||||||  | | |||||||||| ||||||||||||| ||  ||| || ||||||||||||||||||||||||     
T  26212183 tcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaa- 26212281  T
Q  101 ctaacaagtcactctgttt-ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttca 199  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  26212282 ctaacaaatcactctgttttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttca 26212381  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||    
T  26212382 atctcatcctacattcttacctaataaatattagacatgttcaggc 26212427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12699019 - 12699274
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | || ||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||||||     
T  12699019 tcttaaacagcttcacagattataattaacatcctcattaactcttaatactaccccaaggttcaactatcgacaactcgtgcaacaaaggtcgcaaaac 12699118  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |           |    
T  12699119 ctaacaagtcactttgtttctgggtcactcacgaggtgagagcctctgctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctt 12699218  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12699219 tccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggc 12699274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 38227667 - 38227922
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| | ||||||| |||||| ||||| ||| | | |||||||||| |||||| |||||||||||||  || ||||||||||||||||||||||||     
T  38227667 tcttaaatatcttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaa 38227766  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |          |    
T  38227767 cctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatctt 38227866  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38227867 tccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 38227922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10589225 - 10589386
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||| ||||||||| | | ||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||    
T  10589225 tcttaaatagcttcacagattataattaacctcatcattaagtcttaatcctacccaaaggtccaactctagacaactcgtgcaaaaaaggtcgcaaaat 10589324  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10589325 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgag 10589386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 3564298 - 3564043
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| ||||| || ||||| ||||| ||| | | |||||| ||| |||||| |||||| ||||||  || |||||||||||||||||||||||||    
T  3564298 tcttaaacaacttcataggttataattaacatcatcattaagtctcaatactaccccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaat 3564199  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| | ||| |||||          |  |    
T  3564198 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcatttgctcgctgtggcgagttcaggtcagatttccaaaagttcattctacaatctt 3564099  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3564098 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 3564043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 15143967 - 15143716
Alignment:
Q  5 aaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-ta 103  Q
    ||||||||| |||||||||| | ||| ||| | | |||||||| | ||||||  ||||||||||||   | |||||||||||||||||||||||||| ||    
T  15143967 aaacagcttgacagattatattaaacatcatcattaagtcttagtactaccccgaggttcaactcttagcaactcgtgcaacaaaggtcgcaaaatccta 15143868  T
Q  104 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----taa-----ttcca 193  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||||     |||     |||||    
T  15143867 acaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttcca 15143768  T
Q  194 ggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  15143767 ggttcaatctcattctaaaatctttcctaatcattattagacatgttcaggc 15143716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 244
Target Start/End: Original strand, 44116742 - 44116945
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||| ||| || |||||||||| |||| ||||||||||   ||| || |  |||||  ||| |||||||||||||||||||||||||    
T  44116742 ctaccccaaggttcaaccctcaacgactcgtgcaataaagatcgcaaaatcctaaactag-cgttctgtaactgagtcactcgcgaggcgagagcctctg 44116840  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctttcctaatcattattagacatg 238  Q
    |||||| |||||||||||||||||| ||||| |||||| |          |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  44116841 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaatctttccgggttcaatctcattctacattctttcctaatcattattagacatg 44116939  T
Q  239 ttcagg 244  Q
    ||||||    
T  44116940 ttcagg 44116945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 245
Target Start/End: Complemental strand, 17061844 - 17061639
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| | |||||||||||| || |||||||| |||||| ||||||||||   |||||| || |||||   | |||||||||||||||||||||||||     
T  17061844 ctaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctcta 17061746  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaattc-----------caggttcaatctcatcctacattctttcctaatcattattagacat 237  Q
    |||||| | |||||||||||||||| || || |||||| ||||           ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  17061745 ctcgccatcgcgagttcaggtcagattctca-aagttttattctaaaatctatccaggttcaatctcattctacattctttcctaatcattattaaacat 17061647  T
Q  238 gttcaggc 245  Q
    ||||||||    
T  17061646 gttcaggc 17061639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 245
Target Start/End: Complemental strand, 12756600 - 12756396
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||   |||||| |  | |||   ||||  |||||||||||||||||||||     
T  12756600 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggcttt-tgtaattgggcaactcgcgaggcgagagcctcta 12756502  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaat---------tccaggttcaatctcatcctacattctttcctaatcattattagacatgt 239  Q
    |||||| ||| |||||||||||||  ||| | ||||| | |         ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  12756501 ctcgccatggtgagttcaggtcagcttccaaaaagttcattcttaaataatccaggttcaatctcattctacattctttcctaatcattattaaacatgt 12756402  T
Q  240 tcaggc 245  Q
    ||||||    
T  12756401 tcaggc 12756396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 28505106 - 28504980
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| || |  || ||| ||||          ||||||||||||||| ||||||||||    
T  28505106 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattctaagtcttttcaggttcaatctcattctacattctt 28505008  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||    
T  28505007 tcctaatcattattagacatgttcaggc 28504980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 39267447 - 39267325
Alignment:
Q  132 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctttcct 221  Q
    ||||||||||||||||||||||| ||||||||||| |||||| || |  |||||| |          |||||||||||||||||||||||||||||||||    
T  39267447 cgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattctttcct 39267349  T
Q  222 aatcattattagacatgttcaggc 245  Q
    ||||| ||||||||||||||||||    
T  39267348 aatcaatattagacatgttcaggc 39267325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 2832110 - 2831985
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----taa----ttccaggttcaatctcatcctacattcttt 218  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||| || |  |||||     |||    ||| ||||||||||||||||||||||||||    
T  2832110 ctcgcgaggcgagagcctctgctcgccatggtgagttcag-tcagattctccaaagttcattctaagtctttctaggttcaatctcatcctacattcttt 2832012  T
Q  219 cctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||||||||||||    
T  2832011 cctaatcaatattagacatgttcaggc 2831985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 9751285 - 9751229
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  9751285 ttccaggttcaacctcatcctacattctttcctaatcaatattagacatgttcaggc 9751229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 15754622 - 15754566
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggc 15754566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 18302564 - 18302620
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  18302564 ttccaggttcaatctcatcctacattctttcctaataaatattagacatgttcaggc 18302620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 44014560 - 44014616
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  44014560 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 44014616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 16324391 - 16324445
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||||||||||||  || || |||||||||||||||||||||||||||||    
T  16324391 attccaggttcaatctcaaactccaatctttcctaatcattattagacatgttca 16324445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 68131 - 68188
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  || || |||||||||||||||||||||||| |||||||    
T  68131 attccaggttcaatctcaatctccaatctttcctaatcattattagacatattcaggc 68188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 810864 - 810808
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| || || || ||||||||||||||||||||| ||||||||||    
T  810864 ttccaggttcaatcttattctccaatctttcctaatcattattagatatgttcaggc 810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 16056616 - 16056684
Alignment:
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||| || |||||  |||||| ||||||||||||||||||||| |||||  ||||||||||||||    
T  16056616 ctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 16056684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 18302494 - 18302533
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  18302494 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 18302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 34201172 - 34201223
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| ||| |||||||| | |||||||||||||||||||||    
T  34201172 caggttcaatctcattctaaattctttcttgatcattattagacatgttcag 34201223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 810936 - 810894
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggt 810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 12255527 - 12255473
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||    
T  12255527 attccaggttcaatctcaatctagaatctttcctaatcattattatacatgttca 12255473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 12255664 - 12255556
Alignment:
Q  62 ttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggc 159  Q
    |||||||||| || |||||||  |||||| ||||||||||   |||||| || |||||  |||||  ||||||||||||||||||||| |||||  ||||    
T  12255664 ttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggc 12255566  T
Q  160 gagttcaggt 169  Q
    ||||||||||    
T  12255565 gagttcaggt 12255556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 22073223 - 22073272
Alignment:
Q  120 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||| |||||||||||||| |||||| |||||| ||||||||||||||    
T  22073223 ctgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggt 22073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 22073301 - 22073358
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||||||||    
T  22073301 attctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggc 22073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 47832193 - 47832250
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| |||||||| |  || || ||||||||||||||||||||||||||||||||    
T  47832193 attccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggc 47832250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 16056713 - 16056769
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    ||||||||||||||||||  ||| | ||||||||| ||||||||| |||||||||||    
T  16056713 attccaggttcaatctcaatctaaaatctttcctattcattattatacatgttcagg 16056769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 9389501 - 9389462
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  9389501 ctcgcgaggcgagagcctctactcgccatggcgagttcag 9389462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 9751355 - 9751316
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  9751355 ctcgcgaggcgagagcctctgctcaccatggcgagttcag 9751316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 245
Target Start/End: Complemental strand, 11995768 - 11995737
Alignment:
Q  214 tctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||    
T  11995768 tctttcctaatcattattagacatgttcaggc 11995737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 11995835 - 11995796
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  11995835 ctcgcgaggcgagagcctctgcttgccatggcgagttcag 11995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 12718966 - 12719001
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  12718966 ctcgcgaggcgagagcatctgctcgccgtggcgagt 12719001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 12723877 - 12723912
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  12723877 ctcgcgaggcgagagcatctgctcgccgtggcgagt 12723912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 16438843 - 16438792
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  16438843 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 16438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 16907009 - 16906974
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  16907009 ctcgcgaggcgagagcatctgctcgccgtggcgagt 16906974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 17137871 - 17137820
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  17137871 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 17137820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 18279701 - 18279736
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  18279701 ctcgcgaggcgagagcatctgctcgccgtggcgagt 18279736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 18283664 - 18283699
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  18283664 ctcgcgaggcgagagcatctgctcgccgtggcgagt 18283699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 34201099 - 34201138
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  34201099 ctcgcgaggcaagagcctctgctcgccatggcgagttcag 34201138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 68061 - 68099
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 166  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  68061 ctcgcgaggcgagagcctctactcgccatggcgagttca 68099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 2279850 - 2279797
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||  ||| | |||||||||||||||||||  |||||||||||    
T  2279850 caggttcaatctcaatctaaaatctttcctaatcattattatgcatgttcaggc 2279797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 21064898 - 21064841
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||| |||||||||||| ||| | | ||||||||||||||||  ||||||||||||    
T  21064898 attccaagttcaatctcattctaaaatatttcctaatcattattgtacatgttcaggc 21064841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 44014489 - 44014530
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| ||| || ||||||||||||||    
T  44014489 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 44014530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 9389431 - 9389387
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattatta 232  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||||    
T  9389431 attccaggttcaatctcaatctacaatctttcctaatcatcatta 9389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 11262691 - 11262743
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  11262691 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 11262743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 11548010 - 11547958
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  11548010 aggttcaatcttttcctacattcattcctaatcattactaggtatgttcaggc 11547958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 11554606 - 11554554
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  11554606 aggttcaatcttttcctacattcattcctaatcattactaggtatgttcaggc 11554554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14148932 - 14148984
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  14148932 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 14148984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14953560 - 14953612
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  14953560 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 14953612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14959526 - 14959578
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  14959526 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 14959578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 16219452 - 16219408
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattatta 232  Q
    ||||||||||||||||||  ||| | |||||||||||||||||||    
T  16219452 attccaggttcaatctcaatctaaaatctttcctaatcattatta 16219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 26420340 - 26420392
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  26420340 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 26420392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 44408102 - 44408050
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  44408102 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 44408050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 20698370 - 20698128
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||| ||||||||||||||||||| ||||| ||| | | |||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  20698370 tcttgaacagcttcacagattataattaacatcatcattaagtcttaattctatccaaaggttcaactctcgacaactcgtgccacaaaggtcgcaaaat 20698271  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20698270 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 20698171  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20698170 tctcatcctacattctttcctaatcattattagacatgttcag 20698128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13442461 - 13442716
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | ||||||||||   | || ||||||||||||||||| |||||||||||||||||||||||||    
T  13442461 tcttaaacagcttcacagattataattaacatcatcattaagtcttaatgtcatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 13442560  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |           |    
T  13442561 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattctacaatctt 13442660  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13442661 tccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggc 13442716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 17488043 - 17488299
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||| ||||||||||||| ||||| ||| | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  17488043 tcttaaacagattcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 17488142  T
Q  101 ctaacaagtcactctg-tttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |               
T  17488143 ctaacaaggcactctgttttctaggtcactcgcgaggcgagagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatct 17488242  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17488243 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 17488299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26687074 - 26687329
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||  ||| |||||| || ||||||||||| || | ||||||||||||||||| ||||     
T  26687074 tcttaaacagcttcacagattataattaacatcctcattaagtcccaatactaccccaaagttcaactctcaacgattcgtgcaacaaaggtcgtaaaac 26687173  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |    
T  26687174 ctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 26687273  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26687274 tccaggttcaatctcatcctacattctttcctaatcattattagacatgtttaggc 26687329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 40213655 - 40213400
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||| |||||||||| ||||| ||| | | |||||| ||| |||||| |||||| ||||||| || |||||||||||||||||||||||||    
T  40213655 tcttaaacagctttacagattataattaacatcatcattaagtctcaatactaccccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaat 40213556  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||          |  |    
T  40213555 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctt 40213456  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40213455 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 40213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18438721 - 18438976
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||||||||| ||| | | |||||| ||| |||||| |||||||||| ||| || ||||||||||||||||||||||||     
T  18438721 tcttaaacagcttcacagattatagttaacatcatcattaagtctcaatactaccccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaa 18438820  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||| |          |    
T  18438821 cctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattctaaatctt 18438920  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  18438921 tccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggc 18438976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 17499525 - 17499781
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||| |||||| |||||| ||||| ||| | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  17499525 tcttaaacagattcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 17499624  T
Q  101 ctaacaagtcactctg-tttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    |||||||| ||||||| ||||| ||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |               
T  17499625 ctaacaaggcactctgttttctaggtcactagagaggcgagagcctctgctcaccgtggcgaattcaggtcagaatccaacaagtttcattctacaatct 17499724  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 17499781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 30030026 - 30030268
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| | ||| ||| | | |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30030026 tcttaaacagcttcacatattatattaaacatcatcattaagtcttaaagctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 30030125  T
Q  101 ctaacaagtcactctgtttctggg-tcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccaca-agtttaattccaggttc 198  Q
    |||||||| || |||| ||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |  |||| |||||||||||    
T  30030126 ctaacaaggcattctg-ttctgggattactcgcgaggcgagagcctctgctcgccatggcgagtt-aggtcagaattccaaactgtttcattccaggttc 30030223  T
Q  199 aatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||| |||||||||| |||||||||||||||||||||||    
T  30030224 aatctcatcccacattctttcgtaatcattattagacatgttcag 30030268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12399396 - 12399637
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||||||||||||  | | | |||||||| ||||||||||| | ||  | | || ||||||||||||||||||| ||||     
T  12399396 tcttaaatagcttcacagattatagttaacctcttcattatgtcttaatgctacccaaaggcttaatccccaacaactcgtgcaacaaaggtcggaaaa- 12399494  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||  |||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  12399495 ctaacaagtcact--gtttctgggtcactcgtgaggcgagagcctttactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaa 12399592  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     | ||||||| ||| ||||||||||||||||||||||||||||||    
T  12399593 acccatcctatattttttcctaatcattattagacatgttcaggc 12399637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14572775 - 14573030
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgc-aaaa 99  Q
    ||||||||| ||||||| |||||| ||||| ||| | | |||||||||| |||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  14572775 tcttaaacaacttcacaaattataattaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 14572874  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
     ||||||||  ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| | ||| | |||| |          |    
T  14572875 cctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtctt 14572974  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14572975 tccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 14573030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 11424697 - 11424442
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||| | ||||| ||| | | |||||| ||| |||||| || ||||||||||| || ||||||||||||||||||||||||     
T  11424697 tcttaaacagcttcacagattaaaattaacatcaacattaagtctcaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 11424598  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| | | | |||||| |          |    
T  11424597 cctaacaagacactctgtttctaggtcgctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatctt 11424498  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11424497 tccaggttcaatctcattctacattatttcctaatcattattagacatgttcaggc 11424442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 25476319 - 25476065
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||||||| || ||||| ||  | | |||||| ||| |||||  |||||||||||||| || |||||||||||||||||||||||||    
T  25476319 tcttaaacagcttcacagattgtaattaacatcctcattaagtctcaatactacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaat 25476220  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| |||||| |               
T  25476219 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcag-attccaaaagtttcattctaaaatct 25476121  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25476120 ttccaggttcgatctcattctacattctttcataatcattattagacatgttcagg 25476065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 14576767 - 14576512
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| |||||||||||||| ||||| ||| | | || ||||||| |||||| |||||||||||||| || |||||||||||||||||||||||||    
T  14576767 tcttaaacaacttcacagattataattaacatcatcattaaatcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaat 14576668  T
Q  101 -ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
     |||||||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||| | |||| |          |    
T  14576667 cctaacaaggcactttgtttctaggtcactcgcgaggcgagagcctctactcgccgtggcgtgttcaggtcagatttccaaaggtttcattctaagtctt 14576568  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||    
T  14576567 tccaggttcaatgtcattctacattcttttctaatcataattagacatgttcaggc 14576512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14973041 - 14973296
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||   | ||| |||| ||| |  |||||||||    
T  14973041 tcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacaaatcgcaaaat 14973140  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----taa-----t 189  Q
    | ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||     |||     |    
T  14973141 cctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatctt 14973240  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    | | |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14973241 ttctggtttaatctcattctacattctttcctaatcattattagacatgttcaggc 14973296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 43841119 - 43841309
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||  ||| |||||| || ||  ||||||| || ||||||| ||||||||||||||||     
T  43841119 tcttaaacagcttcacagattataattaacatcctcgttaagtcccaatactaccccaaagtcaaactctcaacaactcgtgtaacaaaggtcgcaaaac 43841218  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc 191  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||| ||||    
T  43841219 ctaacaagacactctgtttctgggtcactcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaattccacaagtttcattc 43841309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 23083295 - 23083048
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||||||| || ||||| ||| |   |||||||||| |||||  |||||||||||||  || ||||||||||||||||||||||||     
T  23083295 tcttaaacagcttcacagattgtaattaacatcatcactaagtcttaatactacctcaaggttcaactctgaacaactcgtgcaacaaaggtcgcaaaac 23083196  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttca-ggtcagaatcccacaagtttaa----------t 189  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||| | ||||||||||| | |||||| |          |    
T  23083195 ctaacaagacactatgtttctgggtcattcgcgaggcgagagcctctactcgccatggcgagttaagggtcagaatccaaaaagtttcattctaaatctt 23083096  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacat 237  Q
    ||||||| ||||||||||||||||| | ||||||||| ||||||||||    
T  23083095 tccaggtccaatctcatcctacattttgtcctaatcactattagacat 23083048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 245
Target Start/End: Complemental strand, 17248168 - 17247965
Alignment:
Q  53 acccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat-ctaa-caagtcactctgtttctgggtcactcgcgaggcgagagcctctgct 150  Q
    |||| |||||| ||||||| || |||||||| |||||| ||||||||| |||| |||| || |||||  |||||||||||||||||||||||||||||||    
T  17248168 accccaaggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgct 17248070  T
Q  151 cgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccaggttcaatctcatcctacattctttcctaatcattattagacatgt 239  Q
    |||| |||||||||||||||||| ||||| |||||| |           |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17248069 cgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgt 17247971  T
Q  240 tcaggc 245  Q
    ||||||    
T  17247970 tcaggc 17247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 16809724 - 16809818
Alignment:
Q  138 gagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattatta 232  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  16809724 gagagcatctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggatcaatctcatcctacattctttcctaatcattatta 16809818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16796734 - 16796875
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| ||||||| |||||| ||| ||||  | | |||||||||| ||||||||||||||||||||  || | ||||||||||||||||||||| |    
T  16796734 tcttaaacaacttcacatattataattagcctcttcattaagtcttaatgctacccaaaggttcaactcttaacaattcgtgcaacaaaggtcgcaaagt 16796833  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagag 142  Q
    || ||||| ||||||||||| |||||||||||||||||||||    
T  16796834 ctcacaaggcactctgtttccgggtcactcgcgaggcgagag 16796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 245
Target Start/End: Complemental strand, 53070582 - 53070378
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||   |||||| |  |||||   ||||  |||||||||||||||||||||     
T  53070582 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggct-tctgtaattgggcaactcgcgaggcgagagcctcta 53070484  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtt------taatt---ccaggttcaatctcatcctacattctttcctaatcattattagacatgt 239  Q
    |||||| |||||||||||||||||  ||| | |||||      |||||   |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  53070483 ctcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttcctaatcattattaaacatgt 53070384  T
Q  240 tcaggc 245  Q
    ||||||    
T  53070383 tcaggc 53070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 12340138 - 12340194
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12340138 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggc 12340194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 4588547 - 4588494
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4588547 caggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggc 4588494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 12852169 - 12852043
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctt 217  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||| |  || |||||| |          |||||| ||||||||||||||||||||||    
T  12852169 ctcgcgaggcaagagcctctgctcgccatggcgagttca-gtcagattatcaaaagtttcattctaagtctttccagattcaatctcatcctacattctt 12852071  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||||||||||||||||    
T  12852070 tcctaatcaatattagacatgttcaggc 12852043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 14179708 - 14179764
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggc 14179764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 14665991 - 14666047
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14665991 ttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggc 14666047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 14669146 - 14669202
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  14669146 ttccaggttcaatctcatcctacattctttcctattcaatattagacatgttcaggc 14669202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 14735504 - 14735560
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14735504 ttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggc 14735560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 43842572 - 43842620
Alignment:
Q  197 tcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43842572 tcaatctcatcctacattctttcctaatcattattagacatgctcaggc 43842620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 49389378 - 49389323
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  49389378 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 49389323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 12934045 - 12933989
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  12934045 ttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggc 12933989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 49667818 - 49667762
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  49667818 ttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggc 49667762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 1644489 - 1644447
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 1644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 16104168 - 16104222
Alignment:
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||| ||||| || || ||||||||||||||||||||||||||||||||    
T  16104168 ccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggc 16104222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 32307983 - 32308025
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 32308025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 49667890 - 49667848
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 49667848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 9513299 - 9513352
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  9513299 caggttcaatctcattctctaatctttcctaatcattattagacatgttcaggc 9513352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 9521274 - 9521327
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  9521274 caggttcaatctcattctctaatctttcctaatcattattagacatgttcaggc 9521327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 13210062 - 13210007
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||    
T  13210062 ttccaggttcaatctcattctactttctttcctaatca-tattagacatgtttaggc 13210007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 32308058 - 32308110
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| || || ||||||||||||||||||||| ||||||||||    
T  32308058 aggttcaatctcattctccaatctttcctaatcattattagatatgttcaggc 32308110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 12340068 - 12340107
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  12340068 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 12340107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 16097719 - 16097770
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| || || ||||||||||| ||||||||||||||||||    
T  16097719 caggttcaatctcattctccaatctttcctaataattattagacatgttcag 16097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 19725720 - 19725669
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || ||||||||||||    
T  19725720 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagaatccca 19725669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 42386602 - 42386767
Alignment:
Q  5 aaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct-- 102  Q
    |||||||||||||||||||  ||||| |||     |||||  ||| |||||| |||||||||||| | || |||||||| |||||| ||||||||||       
T  42386602 aaacagcttcacagattatcattaacatcataaacaagtcccaatactaccccaaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatccta 42386701  T
Q  103 aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||| |  |||||   ||||  |||||||||| |||||||||| |||||| ||||||||||||||    
T  42386702 aacaaggct-tctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggt 42386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 324627 - 324677
Alignment:
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| |||||||    
T  324627 gttcaatctcattctacaatctttcctaatcattattatacatattcaggc 324677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 12934117 - 12934075
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggt 12934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 1644415 - 1644362
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||  | ||||||||||||||||| ||||||||||||||    
T  1644415 caggttcaatctcattctctaatctttcctaatcattatcagacatgttcaggc 1644362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 17247236 - 17247203
Alignment:
Q  208 ctacattctttcctaatcattattagacatgttc 241  Q
    ||||||||||||||||||||||||||||||||||    
T  17247236 ctacattctttcctaatcattattagacatgttc 17247203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 1598289 - 1598238
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  1598289 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 1598238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 3833971 - 3834022
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  3833971 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 3834022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 7109999 - 7110034
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  7109999 ctcgcgaggcgagagcatctgctcgccgtggcgagt 7110034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 7113934 - 7113969
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  7113934 ctcgcgaggcgagagcatctgctcgccgtggcgagt 7113969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 245
Target Start/End: Complemental strand, 12171827 - 12171796
Alignment:
Q  214 tctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||    
T  12171827 tctttcctaatcattattagacatgttcaggc 12171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 14665921 - 14665960
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  14665921 ctcgcgaggcgagagcctctgctcgccattgcgagttcag 14665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 14669076 - 14669115
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  14669076 ctcgcgaggtgagagcctctgctcgccatggcgagttcag 14669115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 14735434 - 14735473
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  14735434 ctcgcgaggcgagagcctctgctcgccattgcgagttcag 14735473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 17242269 - 17242320
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  17242269 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 17242320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 22321965 - 22322000
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  22321965 ctcgcgaggcgagagcatctgctcgccgtggcgagt 22322000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 22337020 - 22337055
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  22337020 ctcgcgaggcgagagcatctgctcgccgtggcgagt 22337055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 27409452 - 27409417
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  27409452 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27409417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 38814681 - 38814732
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  38814681 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 38814732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 324549 - 324591
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  324549 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 324591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 16097645 - 16097687
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtc 170  Q
    |||||||||||||||||||| ||| || |||||||||||||||    
T  16097645 ctcgcgaggcgagagcctctactcaccatggcgagttcaggtc 16097687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 49389446 - 49389408
Alignment:
Q  131 gcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  49389446 gcgaggcgagaacctctgctcgccatggcgagttcaggt 49389408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 1465215 - 1465174
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| |||| |||||||||    
T  1465215 ctcgcgaggcgagagcctctactcgccatggcaagttcaggt 1465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 9513228 - 9513265
Alignment:
Q  132 cgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  9513228 cgaggcgagagcctctgctcgccatggtgagttcaggt 9513265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 9521203 - 9521240
Alignment:
Q  132 cgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  9521203 cgaggcgagagcctctgctcgccatggtgagttcaggt 9521240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 13210133 - 13210096
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 37250973 - 37250932
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  37250973 actcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 839609 - 839661
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  839609 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 839661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 12171909 - 12171869
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||| |||||| |||| |||||||||    
T  12171909 tcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 15471309 - 15471365
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||||||| |  || || |||||||||||||| |||| |||||||||||    
T  15471309 attccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagg 15471365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 22110156 - 22110116
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 24188140 - 24188192
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  24188140 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 24188192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 52523462 - 52523406
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||| |||  ||| | ||||||||||| ||||||| ||||||||||||    
T  52523462 ttccaggttcaatatcaaactagaatctttcctaataattattacacatgttcaggc 52523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 55149341 - 55149393
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  55149341 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 55149393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 10360 - 10116
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| ||||||| |   | |||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  10360 tcttatacagcttcacagattataattaaccttattattaagtcttaattctacccaagggttcaactctcgacaactcgtgcaacaatggtcgcaaaat 10261  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10260 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctccccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 10161  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10160 tctcatcctacattctttcctaatcattattagacatgttcaggc 10116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 983 - 739
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||||||  | | |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  983 tcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaat 884  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  883 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctaggttcaa 784  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  783 tctcatcctaaattctttcctaatcattattagacatgttcaggc 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 167913 - 167669
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||||||  | | |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  167913 tcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaat 167814  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  167813 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctaggttcaa 167714  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  167713 tctcatcctaaattctttcctaatcattattagacatgttcaggc 167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 52100 - 52354
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||||||| |||||| |||||||||||||| || ||||||||||||| ||||||||||     
T  52100 tcttaaacagcttcacagattataattaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaa-ggtcgcaaaac 52198  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |    
T  52199 ctaacaagacactcagtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 52298  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52299 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 52354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 980 - 742
Alignment:
Q  7 acagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaaca 106  Q
    ||||||||||||||||||||||||||||   | ||| ||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||||||    
T  980 acagcttcacagattatagttaacctcattcttaagacttaatcctacccaagggttcaactctcgacaaatcgtgcaacaaaggttgcaaaatctaaca 881  T
Q  107 agtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcat 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  880 agtcactctgtttctgggttactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattccaggttcaatctcat 781  T
Q  207 cctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  780 cctacattctttcctaatcattattagacatattcaggc 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 20309299 - 20309528
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||||||||||||||||||||||   | ||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  20309299 cagcttcacagattatagttaacctcattcttaagtcttaatcctacccaagggttcaactctcgacaaatcgtgcaacaagggtcgcaaaatctaacaa 20309398  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20309399 gtcactttgtttctgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 20309498  T
Q  208 ctacattctttcctaatcattattagacat 237  Q
    ||||||||||||||||||||||||||||||    
T  20309499 ctacattctttcctaatcattattagacat 20309528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38050 - 37806
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| ||||||||| |||||||| |||||||||   | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  38050 tcttatacagcttcagagattataattaacctcattgttaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaagt 37951  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37950 ctaacaagtcactatgtttctgggtcgctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatctcacaagtttaattccaggttcaa 37851  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  37850 tctcatcctacatcttttcctaatcattattagacatgttcaggc 37806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 23286048 - 23286290
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  23286048 tcttaaacagcttcacagattataattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcatgcaacaaaggtcgcaaaat 23286147  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| |||||| ||||||    
T  23286148 ctaacaagtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcataatctcacaattttcattccatgttcaa 23286247  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23286248 tctcatcctacattctttcctaatcattattagacatgttcag 23286290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23654320 - 23654089
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||||||  | | |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23654320 tcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 23654221  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||             |||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  23654220 ctaacaagtcactctgtttctgggtcactcgcg-------------tgctcgccgtggcgagttcaagtcagaatcccaacagtttaattccaggttcaa 23654134  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23654133 tctcatcctacattctttcctaatcattattagacatgttcaggc 23654089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 298748 - 298494
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| ||||||||||| |||||||||||||||  | | |||||||||| ||||||||||||| ||  ||| || |||||||||||||||||||||||||    
T  298748 tcttatacagcttcacatattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaat 298649  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------tt 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||    
T  298648 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatcttt 298549  T
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  298548 ccaggttcaatctcatcctatattctttcctaatcattattagacatgttcaggc 298494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 27753762 - 27754017
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||| |||||| |||||| ||||| ||| | | |||||||||| ||| || ||| ||||||||||||| ||||||||||| |||||||||||||    
T  27753762 tcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaactctcgacaactcgtgcaacgaaggtcgcaaaat 27753861  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |    
T  27753862 ctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 27753961  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27753962 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttgaggc 27754017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 6 - 245
Target Start/End: Complemental strand, 32451858 - 32451608
Alignment:
Q  6 aacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaac 105  Q
    |||||||||||| ||| || ||||  |||  || |||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  32451858 aacagcttcacaaattgtaattaatatcatattcaagtcttaatgctaccccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatctaac 32451759  T
Q  106 aagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccag 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||     
T  32451758 aagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccat 32451659  T
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  32451658 gttcaatctcatcctacattctctcctaatcattattaaacatgttcaggc 32451608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22738114 - 22737859
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| |||||| ||||||||| |||| || ||||||||||||||||||||||||     
T  22738114 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaac 22738015  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |           |    
T  22738014 ctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctt 22737915  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    || |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22737914 tctaggttcaatctcatcctacattctttcctaatcattattagatatgttcaggc 22737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 245
Target Start/End: Original strand, 23076630 - 23076882
Alignment:
Q  2 cttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc 101  Q
    ||||||||||||||||||||||| ||||| ||| | |||| ||  ||| |||||| || ||||||||||| || |||||||||||||||||||||||| |    
T  23076630 cttaaacagcttcacagattataattaacatcatcataaaatcccaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacc 23076729  T
Q  102 taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttc 191  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| |          |||    
T  23076730 taacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattcca-aagtttcattctaaatctttc 23076828  T
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23076829 caggtccaatctcatcctacattctttcctaattattattagacatgttcaggc 23076882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22731168 - 22730912
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctaccca-aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaa 99  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| ||||||  ||||||||| | || ||  |||||||||||||| ||||||||    
T  22731168 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccccaaggttcaattatcaacagctcgtgcaacaaagatcgcaaaa 22731069  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
     |||||||| |||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |               
T  22731068 cctaacaaggcactctgtttctgggtgactcgtgaggcgagagcctttgctccccgtggcgagttcaggtcagaatcccacaagtttcattctacaatct 22730969  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22730968 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 22730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22337302 - 22337554
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| ||||||| |||||| ||||| ||| | | |||||||||| |||| | |||||||||||||| || |||||||||||||||||| |||||     
T  22337302 tcttaaacaacttcacaaattataattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaa 22337401  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  | | |||||| |          |    
T  22337402 cctaacaagactctctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatctt 22337501  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22337502 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 22337554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 23660209 - 23660464
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||| ||| |||||| ||||| ||| |   |||||| ||| |||||| |||||||||||||| |  |||||||||| ||||||| |||||     
T  23660209 tcttaaacagctttacaaattataattaacatcatcaataagtctcaatactaccccaaggttcaactctcaataactcgtgcaataaaggtcacaaaaa 23660308  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |               
T  23660309 cctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcaggtcag-attccaaaagtttcattctaaaatct 23660407  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23660408 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 23660464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 23071768 - 23071642
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| || |  || ||| ||||          ||||||||||||||| ||||||||||    
T  23071768 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattctaagtcttttcaggttcaatctcattctacattctt 23071670  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||    
T  23071669 tcctaatcattattagacatgttcaggc 23071642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23060700 - 23060815
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||| ||| | | |||||  ||| |||||| || |||||| |||| || ||||||| ||||||||||||||||     
T  23060700 tcttaaacagcttcaca-attataattaacatcatcattaagtcccaatactaccccaaagttcaattctcaacaactcgtg-aacaaaggtcgcaaaac 23060797  T
Q  101 ctaacaagtcactctgtt 118  Q
    |||||||| |||||||||    
T  23060798 ctaacaaggcactctgtt 23060815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 22133948 - 22133896
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  22133948 aggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 22133896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 23708500 - 23708383
Alignment:
Q  53 acccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgct 150  Q
    |||| ||||||||||| || || |||||||| |||||| ||||||||||   |||||| || |||||  |||||| |||||| |||||||||||||| ||    
T  23708500 accccaaggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtaactcgcaaggcgagagcctctact 23708402  T
Q  151 cgccgtggcgagttcaggt 169  Q
    |||  ||||||||||||||    
T  23708401 cgctatggcgagttcaggt 23708383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 28292027 - 28291981
Alignment:
Q  199 aatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  28292027 aatctcattctacattctttcctaatcattcttagacatgttcaggc 28291981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 28406368 - 28406421
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| || || ||||||||||| ||||||||||||||||||||    
T  28406368 caggttcaatctcattctccaatctttcctaattattattagacatgttcaggc 28406421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 22134020 - 22133977
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 172  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagttcagttcag 22133977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 22740768 - 22740717
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||||||||||||||| | |||| |||||    
T  22740768 ctcgcgaggcgagagcatctgctcgccgtggcgagttcaagccagattccca 22740717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 25176227 - 25176284
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  || ||  ||||||||||||| |||||||||||||||||    
T  25176227 attccaggttcaatctcaatctccaacctttcctaatcataattagacatgttcaggc 25176284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 12901321 - 12901286
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  12901321 ctcgcgaggcgagagcatctgctcgccgtggcgagt 12901286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 22460999 - 22460948
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  22460999 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 22460948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 24628287 - 24628252
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  24628287 ctcgcgaggcgagagcatctgctcgccgtggcgagt 24628252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 24649654 - 24649689
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  24649654 ctcgcgaggcgagagcatctgctcgccgtggcgagt 24649689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 27379241 - 27379206
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  27379241 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27379206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 27383287 - 27383252
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  27383287 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27383252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 27602094 - 27602129
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  27602094 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27602129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 41530818 - 41530783
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  41530818 ctcgcgaggcgagagcatctgctcgccgtggcgagt 41530783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 28406297 - 28406335
Alignment:
Q  131 gcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggt 28406335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 25176158 - 25176199
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtc 170  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  25176158 tcgcgaggcgagggcctctactcgccatggcgagttcaggtc 25176199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 24503473 - 24503525
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  24503473 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 24503525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 27197248 - 27197300
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  27197248 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 27197300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 31756232 - 31756268
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagtt 164  Q
    |||||||||||||||||||| |||||| |||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13682 - 13926
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| |||||||||   | |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  13682 tcttatacagcttcacagattataattaacctcattgttaagtcttaatcctaccgaaaggttcaactctcgacaactcgtgcaacaaaagtcgcaaaat 13781  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  13782 ctaacaagtcactctgtttctgggtcgctcgcgaggcgagagcctctgctcgccgtggcgagttcagctcagaatctcacaagtttaattccaggttcaa 13881  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  13882 tctcatgctacatcctttcctaatcattattagacatgttcaggc 13926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 20360894 - 20360650
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||||||| | | |||||||||| ||||||||||||||||  ||| || ||||||||||||||||||||||||     
T  20360894 tcttaaacagcttcacatattataattaacctcatcattaagtcttaatactacccaaaggttcaatcctcaacaactcgtgcaacaaaggtcgcaaaac 20360795  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20360794 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 20360695  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20360694 tctcatcctacattctttcctaatcattattagacatgttcaggc 20360650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 20638217 - 20637973
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | ||||||||||  || || ||||||||||||||||| |||||||||||||||||||||||||    
T  20638217 tcttaaacagcttcacagattataattaacatcatcattaagtcttaatgttatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 20638118  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20638117 ctaacaaggcactctgtttctgggtcactcgcgaggtgagagcctttgctcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 20638018  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20638017 tctcatcctacattctttcctaatcattattagacatgttcaggc 20637973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 18821714 - 18821509
Alignment:
Q  40 aagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 139  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18821714 aagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggcga 18821615  T
Q  140 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 239  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18821614 gagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctctcctaatcattattaaacatgt 18821515  T
Q  240 tcaggc 245  Q
    ||||||    
T  18821514 tcaggc 18821509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 22831696 - 22831930
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||||||||||||||||||||||   | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  22831696 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa 22831795  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||    
T  22831796 gtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtc 22831895  T
Q  208 ctacattctttcctaatcattattagacatgttca 242  Q
    ||| ||||||  ||||||| |||||||||||||||    
T  22831896 ctatattcttcactaatcaatattagacatgttca 22831930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 16920560 - 16920323
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||| ||||||||||||||||||   | |||||||||| |||||||| ||||||||||||||  | |||||||||||||||||||||||| |||||    
T  16920560 cagcttcatagattatagttaacctcattcttaagtcttaattctacccaagggttcaactctcgagaaatcgtgcaacaaaggtcgcaaaatccaacaa 16920461  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||| |||    
T  16920460 gtcactttgtttctgggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggtcagaattccataagtttaattccaggtacaatcttatc 16920361  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  16920360 ctacattcttttctaatcattattagacatattcaggc 16920323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 11185699 - 11185933
Alignment:
Q  11 cttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtc 110  Q
    ||||||||||||  |||||||||||  | ||||||||||||||||||| ||| | |  |||||| || | ||||||||||||||||||||||||||||||    
T  11185699 cttcacagattacggttaacctcactattaagtcttaatcctacccaagggtccgatcctcgacaacccatgcaacaaaggtcgcaaaatctaacaagtc 11185798  T
Q  111 actctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatccta 210  Q
    ||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  11185799 actatgtttctgggtcactcacgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtccta 11185898  T
Q  211 cattctttcctaatcattattagacatgttcaggc 245  Q
    || ||||  ||||||| |||| |||||||||||||    
T  11185899 cactcttcactaatcaatattcgacatgttcaggc 11185933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22780161 - 22779906
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||  ||||| ||| | | ||||||| || |||||| ||||||||||||||| | ||| |||||||||||||| |||||     
T  22780161 tcttaaacagcttcacagattatgattaacatcatcattaagtctttatactaccccaaggttcaactctcggcaacttgtgcaacaaaggtcacaaaac 22780062  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||| | |||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| |           |    
T  22780061 ctaacaggacactctgtttctaggttactcgcgaggcgagagcctttgcttgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctt 22779962  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22779961 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 22779906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18409761 - 18409506
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||| |  ||||||||||||||||||| |||||    
T  18409761 tcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccctaaggttcaactctcaataactcgtgcaacaaaggtcgtaaaat 18409662  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | | |||||| |          |    
T  18409661 cctaacaaggcactctgtttctgggtcactagagaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcaaaaagtttcattctaaatctt 18409562  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  18409561 tccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggc 18409506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 29060727 - 29060982
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||  ||| | | |||||| ||| |||||| |||||||| ||||   | |||||||||||||||||||||||||    
T  29060727 tcttaaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaat 29060826  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| | ||| |||||          |  |    
T  29060827 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctt 29060926  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  29060927 tccaggttcaatctcatcctacattccttcctaatcattattggacatgttcaggc 29060982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17287730 - 17287475
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||| ||||| ||||| ||  | | |||||| ||| |||||| |||||||||||||| || ||||||||||||||| | |||||      
T  17287730 tcttaaacagcttcacaggttataattaacatcctcattaagtctcaatgctaccccaaggttcaactctcaacaactcgtgcaacaaagatagcaaacc 17287631  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| ||||||||||||||||||||| |||| | |||||||||  ||||||||||||||| ||||||||||||||||||||| |           |    
T  17287630 ctaacaagacactctgtttctgggtcactcacgagacaagagcctctaatcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctt 17287531  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17287530 tccaggtacaatcacatcctacattctttcctaatcattattagacatgttcaggc 17287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 19303475 - 19303220
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||| ||||||||||||||||||| ||||| ||| | | || ||| | | |||||| |||||||||||||   | ||| |||| ||| || |||||||||    
T  19303475 tcttcaacagcttcacagattataattaacatcatcattaattctcagtgctaccccaaggttcaactcttagcaacttgtgcgacatagatcgcaaaat 19303376  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc-------- 191  Q
    | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||            
T  19303375 cctaacaaggcactctgtttctgggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaatctt 19303276  T
Q  192 --caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
      ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19303275 ttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 19303220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 25629289 - 25629034
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| |||||  || | | |||||| ||| |||||| |||||||||||||  || |||||||||||||| ||||||||||    
T  25629289 tcttaaacagcttcacagattataattaacaacatcattaagtctcaatactaccccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaat 25629190  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||| || |||||          || |    
T  25629189 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatt 25629090  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||| ||||| ||||    
T  25629089 tccaggttcaatctcattctacaatatttcctaatcattaatagagatgtttaggc 25629034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 20593960 - 20594215
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||| | | | | | |||||| ||| |||||| |||||||||| ||  || ||| |||| ||| || |||||||||    
T  20593960 tcttaaacagcttcacagattataattatcattatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaat 20594059  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttta----------at 189  Q
    | ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||           |    
T  20594060 cctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttccaaaagtttattctacaatctt 20594159  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||    
T  20594160 tccaggttcaatctcatcctacattcttccctaatcatatttagacatgtttaggc 20594215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 28496280 - 28496152
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattct 216  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| || || |||||| ||||          ||||||||||||||| |||||||||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtctttccaggttcaatctcattctacattct 28496181  T
Q  217 ttcctaatcattattagacatgttcaggc 245  Q
    || ||||||||||||||||||||||||||    
T  28496180 tttctaatcattattagacatgttcaggc 28496152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 29808691 - 29808562
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc------------caggttcaatctcatcctacatt 214  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||||            ||||||||||||||| |||||||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaaatctttccaggttcaatctcattctacatt 29808593  T
Q  215 ctttcctaatcattattagacatgttcaggc 245  Q
    |||| ||||||||||||||||||||||||||    
T  29808592 cttttctaatcattattagacatgttcaggc 29808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 18456959 - 18457156
Alignment:
Q  58 aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 155  Q
    |||||||||||||| || |||||||| |||||| ||||||||||   |||||| |  |||||   ||||  ||||||||||||||||||||| ||||||     
T  18456959 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctgaacaaggct-tctgtaattgggcaactcgcgaggcgagagcctctactcgcca 18457057  T
Q  156 tggcgagttcaggtcagaatcccacaagtt------taatt---ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||| ||||||||||||  ||| | |||||      |||||   |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  18457058 tggctagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggc 18457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 1561689 - 1561745
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggc 1561745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 21939699 - 21939825
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  |||||| ||||          |||| |||||||||||||||||||||    
T  21939699 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagttttattctaagtctttccaggctcaatctcatcctacattctt 21939797  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||| ||||||||||||    
T  21939798 tcctaatcaatattacacatgttcaggc 21939825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 19652581 - 19652637
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  19652581 ttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggc 19652637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 25611530 - 25611481
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 177  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  25611530 ctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatcc 25611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 15894237 - 15894186
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  15894237 ctcgcgaggtgagagactctgctcgccatggcgagttcaggtcagaatccca 15894186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 4189342 - 4189398
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  4189342 ttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggc 4189398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 4667948 - 4667892
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  4667948 ttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggc 4667892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 4674795 - 4674739
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  4674795 ttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggc 4674739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 15894165 - 15894109
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  15894165 ttccaggtccaatctcatcttacattcactcctaatcaatattagacatgttcaggc 15894109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 22334617 - 22334561
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  22334617 ttccaggtccaatctcatcttacattcactcctaatcaatattagacatgttcaggc 22334561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 25603120 - 25603064
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| |||||||||| | |||||  ||||||||||||||||||||||||||||    
T  25603120 ttccaggtccaatctcatcatgcattcactcctaatcattattagacatgttcaggc 25603064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 25603319 - 25603143
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||||||| || | ||| ||  | | |||||||||  ||||||||||||||||||||   | |||| ||| ||| || ||||||       
T  25603319 tcttaaacagcttcacagattctattaaacatcgtcattaagtcttaaagctacccaaaggttcaactctaagcaactcatgcgacacagatcgcaagtc 25603220  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 177  Q
    || ||||  |||||||||   |  |  ||| ||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  25603219 ctcacaatgcactctgttctagactagctcacgaggcgagagcctctgctcgccatggtgagttcaagtcagaatcc 25603143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 25611458 - 25611402
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||| || |||||  ||||||||||||||||||||||||||||    
T  25611458 ttccaggtccaatctcatgctgcattcactcctaatcattattagacatgttcaggc 25611402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 31155133 - 31155077
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  31155133 ttccaggttcaatctcattctacattctttcccaatcgttattagacttattcaggc 31155077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 22334699 - 22334648
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| ||||||| || ||||||||| ||||||||||||||    
T  22334699 ctcgcgaggcgagagcatctgctcaccatggcgagtttaggtcagaatccca 22334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 25641991 - 25641940
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||||||||||||||| | |||| |||||    
T  25641991 ctcgcgaggcgagagcatctgctcgccgtggcgagttcaagccagattccca 25641940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 4185558 - 4185505
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    |||||||||||||||||  |||||||||||| ||||| ||||||||| ||||||    
T  4185558 ttccaggttcaatctcactctacattctttcataatcgttattagacttgttca 4185505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 4185629 - 4185588
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  4185629 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 4185588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 4668019 - 4667978
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  4668019 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 4667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 22080543 - 22080502
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 22080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 23019792 - 23019849
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | ||||||||||||||||| | ||||||||||||    
T  23019792 attccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggc 23019849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 27333089 - 27333049
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  27333089 tcgcgaggcgagagcctctactcgccatggcgagttcaggt 27333049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 27393829 - 27393789
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  27393829 tcgcgaggcgagagcctctactcgccatggcgagttcaggt 27393789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 31164589 - 31164537
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||| |||||||||||||||||| ||||||||||||| |||  ||||||||||    
T  31164589 aggtccaatctcatcctacattcattcctaatcattactaggtatgttcaggc 31164537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 8244158 - 8244193
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  8244158 ctcgcgaggcgagagcatctgctcgccgtggcgagt 8244193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 11567160 - 11567195
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  11567160 ctcgcgaggcgagagcatctgctcgccgtggcgagt 11567195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 12496605 - 12496656
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  12496605 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 12496656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 19652512 - 19652551
Alignment:
Q  130 cgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  19652512 cgcgaggcgagagcctctactcgccatggcgagttcaggt 19652551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 19870888 - 19870923
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  19870888 ctcgcgaggcgagagcatctgctcgccgtggcgagt 19870923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 22863243 - 22863278
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  22863243 ctcgcgaggcgagagcatctgctcgccgtggcgagt 22863278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 23395366 - 23395401
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  23395366 ctcgcgaggcgagagcatctgctcgccgtggcgagt 23395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 27333019 - 27332965
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||||| ||||| ||| | |||||||||||||| |||| ||||||||||    
T  27333019 ttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcag 27332965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 27393759 - 27393705
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||||| ||||| ||| | |||||||||||||| |||| ||||||||||    
T  27393759 ttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcag 27393705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 16924687 - 16924642
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 173  Q
    |||||||||||||||| |||||||||| |||||||| |||| ||||    
T  16924687 ctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaga 16924642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 16929402 - 16929357
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 173  Q
    |||||||||||||||| |||||||||| |||||||| |||| ||||    
T  16929402 ctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaga 16929357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 31155204 - 31155163
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||||||| ||| |||| |||||    
T  31155204 ctcgcgaggcgagagcctctgctcgccatggagagtacaggt 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 19668688 - 19668728
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  19668688 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 22331803 - 22331855
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  22331803 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 22331855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 23657229 - 23657189
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  23657229 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 23657189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21292904 - 21292660
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| ||| |||||||||||||| |||||||||   | ||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||    
T  21292904 tcttatacaacttcacagattataattaacctcattattaagtcttaatcctacccaagggtccaactcccgacaactcgtgcaacaaaggtcgcaaaat 21292805  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21292804 ctaaaaagtcactctatttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattccaggttcaa 21292705  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  21292704 tctcatcctacattctttcctaattattattagacatgttcaggc 21292660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 8286776 - 8286536
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| | |||| ||||| ||  | | |||||||||| ||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  8286776 tcttaaacagcttcacataatataattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcaagcaacaaaggtcgcaaaat 8286677  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||||    
T  8286676 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccatggctagtttaggtcagaatcccacaagtttcattccaggttcaa 8286577  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttc 241  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  8286576 tctcatcctacattctttcttaatcattattagacatgttc 8286536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 22107306 - 22107063
Alignment:
Q  2 cttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc 101  Q
    ||||||||||||||||||||||| ||||||||  | | |||||||||| |||| |||||||||| ||||| || ||||||||||||||||||||||| |     
T  22107306 cttaaacagcttcacagattataattaacctcttcattaagtcttaatactactcaaaggttcatctctcaacaactcgtgcaacaaaggtcgcaaagta 22107207  T
Q  102 taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaat 201  Q
    | ||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  22107206 tcacaaggcactctatttccgggtcactcgcgaggcgagagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaatttcaggttcaat 22107107  T
Q  202 ctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||    
T  22107106 ctcgtcctacattctttcctaatcaatattagacatgttcaggc 22107063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22075206 - 22075450
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||||||  | | |||||||||| ||||||||||||| ||  ||| || ||||||||||||||||||||||||     
T  22075206 tcttaaacagcttcacatattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaa- 22075304  T
Q  101 ctaacaagtcactctgttt-ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttca 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  22075305 ctaacaagtcactctgttttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttca 22075404  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     | ||||||||||||||| |||||||||||||||||||||||||||    
T  22075405 ttttcatcctacattcttacctaatcattattagacatgttcaggc 22075450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13095681 - 13095936
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| ||||||| |||||| ||||| ||| | | |||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||||     
T  13095681 tcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaa 13095780  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |          |    
T  13095781 cctaacaagtcactctgtttctaggtcactcgcgaggcgagggcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaatctt 13095880  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13095881 tccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggc 13095936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 24529407 - 24529663
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||||||||| ||| | | |||| | ||| |||||| |||||||||||||| || ||| ||||||||||||||||||||     
T  24529407 tcttaaacagcttcacagattatagttaacatcatcattaagtttcaatactaccccaaggttcaactctcaactactagtgcaacaaaggtcgcaaaaa 24529506  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |               
T  24529507 cctaacaagactctctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacct 24529606  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24529607 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 24529663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23390430 - 23390175
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||| ||||| ||  | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||| ||||||    
T  23390430 tcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaat 23390331  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| ||||||||||  |||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |           |    
T  23390330 ctaacaaggcactctgttttagggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctt 23390231  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23390230 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 23390175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13025497 - 13025752
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| ||||||| |||||| ||||| ||| | | |||||||||| |||||| |||||||||||||| || | ||||||||||||||||||||||     
T  13025497 tcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaa 13025596  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | |||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |          |    
T  13025597 cctaacaagtcactctgtttctaggtcactcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaatctt 13025696  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13025697 tccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggc 13025752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21986081 - 21985826
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| ||||||| |||||||||||| ||| | | |||||| ||| |||||| |||||||||||||| || ||||||||||||||||||||||||     
T  21986081 tcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 21985982  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||| |          |    
T  21985981 cctaacaagacactctgtttctgggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctt 21985882  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21985881 tccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 21985826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 24493755 - 24494010
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||| ||||| |||   | |||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||||     
T  24493755 tcttaaatagcttcacagattataattaacatcattattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 24493854  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| | |||||| |          |    
T  24493855 cctaacaagacactctgtttatgggttactcacgaggcgaaagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatctt 24493954  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24493955 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 24494010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9078139 - 9078394
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||| ||  || ||| |||| ||| || |||||||||    
T  9078139 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaat 9078238  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | | |||| |          |    
T  9078239 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcaaaaggtttcattctaaatctt 9078338  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  9078339 tccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggc 9078394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 25421719 - 25421974
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||| || |||||||||||||||||||||||||    
T  25421719 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatgctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaat 25421818  T
Q  101 -ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
     |||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| | ||  |||||| |          |    
T  25421819 cctaacaaggcactcggtttctaggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaagtcagatttccgaaagtttcattctaaatctt 25421918  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||    
T  25421919 tccaggtccaatctcatcctaagttctttcctaatcattaatagacatgttcaggc 25421974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 25431581 - 25431836
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||  |||||||||||||| || ||||||| |||||||||||||||||    
T  25431581 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatgctacctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaat 25431680  T
Q  101 -ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
     |||||||| |||||  |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| | ||| |||||| |          |    
T  25431681 cctaacaaggcactcgatttctgggtcactcgcgaggtgagagcctctactcgccgtggcgagttcaagtcagatttccaaaagtttcattctaaatctt 25431780  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||    
T  25431781 tccaggtccaatctcatcctaaattctttcctaatcattaataaacatgttcaggc 25431836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 1096654 - 1096909
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| || ||||| ||||| ||  | | |||||| ||| |||||| ||||| ||||| |  || ||| |||| ||| || |||||||||    
T  1096654 tcttaaacagcttcataggttataattaacatcctcattaagtctcaatactaccccaaggtccaacttttaacaacttgtgcgacagagatcgcaaaat 1096753  T
Q  101 -ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
     |||| ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||          |  |    
T  1096754 tctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctt 1096853  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1096854 tccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggc 1096909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 245
Target Start/End: Complemental strand, 11581129 - 11580924
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||||||| || |||||| | |||||| ||||||||||   |||||| || |||||   ||||||||||||||||||||||||||||    
T  11581129 ctaccccaaggttcaactctcaacgactcgtacgacaaagatcgcaaaatcctaaacaag-cattctgtaaatgggtcactcgcgaggcgagagcctctg 11581031  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaat-----------tccaggttcaatctcatcctacattctttcctaatcattattagacat 237  Q
    |||||| |||||||||||||||||| || || |||||| ||           ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11581030 ctcgccatggcgagttcaggtcagattctca-aagttttattctaaaatctatccaggttcaatctcattctacattctttcctaatcattattaaacat 11580932  T
Q  238 gttcaggc 245  Q
    ||||||||    
T  11580931 gttcaggc 11580924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 242
Target Start/End: Complemental strand, 36154712 - 36154510
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||   |||||| || |||||   | |||||||||||||||||||||||||     
T  36154712 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctcta 36154614  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaattc-----------caggttcaatctcatcctacattctttcctaatcattattagacat 237  Q
    |||||| |||||||||||||||||| || || |||||| ||||           ||||||||||||||  ||||||||||||||||||||||||||||||    
T  36154613 ctcgccatggcgagttcaggtcagattctca-aagttttattctaaaatctatccaggttcaatctcactctacattctttcctaatcattattagacat 36154515  T
Q  238 gttca 242  Q
    |||||    
T  36154514 gttca 36154510  T

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Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 22119998 - 22119872
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  |||||| ||||          ||||||||||||||||||||||||||    
T  22119998 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattctt 22119900  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||||||||||||||||    
T  22119899 tcctaatcaatattagacatgttcaggc 22119872  T

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Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 19660572 - 19660516
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  19660572 ttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggc 19660516  T

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Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 21565930 - 21565986
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  21565930 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 21565986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 21871306 - 21871250
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  21871306 ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggc 21871250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 21875586 - 21875530
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  21875586 ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggc 21875530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 24767142 - 24767016
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| || |||||||| |||||| || |  |||||| |          |||||| ||||||||||||||||||||||    
T  24767142 ctcgcgaggcgagagcctctgctcgccatgacgagttca-gtcagattctccaaagtttcattctaagtctttccagattcaatctcatcctacattctt 24767044  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    || |||||| ||||||||||||||||||    
T  24767043 tcgtaatcaatattagacatgttcaggc 24767016  T

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Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 22959267 - 22959212
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  22959267 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 22959212  T

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Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 22144294 - 22144492
Alignment:
Q  58 aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 155  Q
    |||||||||||||| || |||||||| |||||| ||||||||||   |||||| || |||||  |||||  ||||||||||||||||||||| |||||      
T  22144294 aaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgcta 22144392  T
Q  156 tggcgagttcaggtcagaatcccacaagt------ttaa----ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||   | ||||| || |      ||||    |||||||||||||||||  ||| | ||||||||||||||| ||| ||||||||||||    
T  22144393 tggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttcaatctcaatctagaatctttcctaatcattgttacacatgttcaggc 22144492  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 19669286 - 19669340
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||| |||||||||||| |  || ||||||||||||||||||||||||||||||    
T  19669286 ttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcag 19669340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 5888981 - 5888940
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  5888981 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 5888940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 19660643 - 19660606
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  19660643 ctcgcgaggcgagagcctctgctcgccatggcgagttc 19660606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 21498753 - 21498696
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||||| ||| ||||||| ||||||| ||||||||||||    
T  21498753 attccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggc 21498696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 21501968 - 21501919
Alignment:
Q  120 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||| ||||||||||||||||||||| |||||  ||||||||||||||    
T  21501968 ctgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 21501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 21565863 - 21565900
Alignment:
Q  132 cgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21565863 cgaggcgagagcctctgctcgccatggcgagttcaggt 21565900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 22959339 - 22959298
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  22959339 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 22959298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 20026746 - 20026706
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  20026746 actcgcgaggcgagagcctctactcgctgtggcgagttcag 20026706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 19472528 - 19472493
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  19472528 ctcgcgaggcgagagcatctgctcgccgtggcgagt 19472493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 20296145 - 20296180
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  20296145 ctcgcgaggcgagagcatctgctcgccgtggcgagt 20296180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 21340576 - 21340525
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  21340576 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 21340525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 23201680 - 23201731
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| |||| |||| |||||    
T  23201680 ctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagattccca 23201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 23535398 - 23535347
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || |||||| |||||    
T  23535398 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagattccca 23535347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 24532857 - 24532806
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  24532857 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 24532806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 26665940 - 26665889
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  26665940 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 26665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 26937537 - 26937486
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  26937537 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 26937486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 31342414 - 31342453
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  31342414 ctcgcgaggcgagagcatctgctcgccatggcgagttcag 31342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 41294176 - 41294125
Alignment:
Q  194 ggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||| ||||||||||| |||||||||| || ||| |||||||||||    
T  41294176 ggttcaatctgatcctacattcattcctaatcaatactaggcatgttcaggc 41294125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 166  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 20232847 - 20232896
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 177  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||    
T  20232847 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 20232896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 21329231 - 21329174
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | ||||| |||||||| | |||||||||||||||    
T  21329231 attccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggc 21329174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 21741345 - 21741308
Alignment:
Q  132 cgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  21741345 cgaggcgagagcctctactcgccatggcgagttcaggt 21741308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 123114 - 123074
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  123114 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 21295006 - 21294954
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  21295006 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 21294954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 21871377 - 21871321
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagt 184  Q
    |||||||| || |||||||| |||||| |||||||| |||||||||||| || ||||    
T  21871377 ctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcacaaaagt 21871321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 21875657 - 21875601
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagt 184  Q
    |||||||| || |||||||| |||||| |||||||| |||||||||||| || ||||    
T  21875657 ctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcacaaaagt 21875601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 25535351 - 25535403
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  25535351 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 25535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 11445 - 11203
Alignment:
Q  3 ttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct 102  Q
    |||| ||||||||||||||||| ||||||||| | | |||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  11445 ttaatcagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatct 11346  T
Q  103 aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatc 202  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  11345 aacaagtcactttgtttctgtgtcactcgcgaggtgagagcctcttctcgccttggcgagttcaggtcagtatcccacaagtttcattccaggttcaatc 11246  T
Q  203 tcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11245 tcatcctacattctttcctaatcattattagacatgttcaggc 11203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 15399 - 15163
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| ||||||| |   | ||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||    
T  15399 tcttatacagcttcacagattataattaaccttattattaagtcttaatcctacccaacgagtcaactctcgacaactcgtgcaacaaaggtcgcaaaat 15300  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15299 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaatcctacaagttttattccaggttcaa 15200  T
Q  201 tctcatcctacattctttcctaatcattattagacat 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  15199 tctcatcctacattctttcctaatcattattagacat 15163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 31971442 - 31971686
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| ||| |||||||||||||| |||||||||   | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  31971442 tcttatacatcttcacagattataattaacctcattgttaagtcttaatcctacccaaaggttcagctctcgacaactcgtgcaacaaaggtcgcaaaat 31971541  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||||| |||||||||| ||||||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  31971542 ctaacaagtcactctatttctgggtcgctcgcgaggtgacagcctctgctcgccggggcgagttcaggtcagaatctcacaagtttaattccaggttcaa 31971641  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  31971642 tctcatcctacatcctttcctaatcattattagacatgttcaggc 31971686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21918934 - 21918689
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||||||  || ||||||||| | | ||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  21918934 tcttaaacagcttcacagatcgtaattaacctcatcgttaagtcttaatcttacccaagggttcaactctcgacaactcatgcaacaaaggtcgcaaaat 21918835  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttt-aattccaggttca 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  21918834 ctaacaagtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcatttccaggttca 21918735  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  21918734 atctcttcctacattcttttctaatcattattagacatgttcaggc 21918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 16199580 - 16199337
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| |||||||||   | ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  16199580 tcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 16199481  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    | || |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  16199480 ccaataagtcactctgtttttgggtcactcgcgaggcgagagcgtctgctcgctgtggcgagttcaggtcagaatcccac-agtttaattctaggttcaa 16199382  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  16199381 tctcatcctacattctttcctaatcattataagacatgttaaggc 16199337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 25363074 - 25362832
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||| ||||  | | |||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||| |    
T  25363074 tcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaactcgtgcaagaaaggtcgcaaagt 25362975  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    || ||||| ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  25362974 ctcacaaggcactctgtttccgggtcactctcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 25362875  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  25362874 tctcatcctacattctttcctaatcattattagtcatgttcag 25362832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 18879164 - 18878916
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    ||||||||||||||||||||||| ||| | | ||||||| || ||| || ||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18879164 cagcttcacagattatagttaacatcatcattaagtcttgatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggccgcaaaatctaacaa 18879065  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccaggt 196  Q
    | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |           ||||||||    
T  18879064 ggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggt 18878965  T
Q  197 tcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18878964 tcaatctcatcctacattctttcctaatcattattagacatgttcaggc 18878916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 20536395 - 20536650
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| |||||||||||||| ||||| ||  | | |||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||     
T  20536395 tcttaaacaacttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaacactcgacaactcgtgcaacaaaggtcgcaaaac 20536494  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |           |    
T  20536495 ctaataagtcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctt 20536594  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20536595 tccaggttcaatctcatcctacattctttcctaatcattatcagacatgttcaggc 20536650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 21923862 - 21923609
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||||||| |||||  |||||||||||||| || ||||| ||||||||||||||||||     
T  21923862 tcttaaacagcttcacagattataattaacatcatcattaagtcttaatactacctcaaggttcaactctcaactactcgggcaacaaaggtcgcaaaac 21923763  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttca-ggtcagaatcccacaagtttaattc-------- 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||| ||||            
T  21923762 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcagggtcagaatccaaaaagtttcattctaaatctt 21923663  T
Q  192 --caggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
      ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21923662 ttcaggttcaatctcatcctacattctgtcctaatcattattagacatgttcag 21923609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18818343 - 18818089
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| |||||| ||  |||||||||| || ||||||||||||||||||||||||     
T  18818343 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccctaaatttcaactctcaacaactcgtgcaacaaaggtcgcaaaac 18818244  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |           |    
T  18818243 ctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaa-accaaaagtttcattttacaatctt 18818145  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18818144 tccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggc 18818089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 45130932 - 45130710
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| |||||||||   | ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  45130932 tcttatacagcttcacagattataattaacctcattattaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaaat 45130833  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||| ||||||||||||||||||||||||||||||||||                      |||||||||||||||||||||||||||||||||||||||    
T  45130832 ctaataagtcactctgtttctgggtcactcgcgaggcga----------------------gttcaggtcagaatcccacaagtttaattccaggttcaa 45130755  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45130754 tctcatcctacattctttcctaatcattattagacatgttcaggc 45130710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 245
Target Start/End: Original strand, 23406628 - 23406823
Alignment:
Q  61 gttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcg 160  Q
    ||||||||||| |  |||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23406628 gttcaactctcaataactcgtgcaacaaaggtcacaaaacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcg 23406727  T
Q  161 agttcaggtcagaatcccacaagtttaa-----------ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||| |           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23406728 agttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggc 23406823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28648978 - 28648723
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||| || |||||||||||||||||||||||||    
T  28648978 tcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaat 28648879  T
Q  101 -ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
     |||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||| | | | |||| |          |    
T  28648878 cctaacaaggcactctgtttctgggtcatgcgcaaggcgagagcctctgctcgccgtggcgagttcaggtcaaaattcaaaaggtttcattctaaatctt 28648779  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28648778 tccatgttcaatctcatcctacattctttcataatcattattagacatgttcaggc 28648723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22626922 - 22627177
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgc-aaaa 99  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||| ||| |||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  22626922 tcttaaacagcttcacagattataattaacatcctcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 22627021  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
     |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||| | ||| | |||          |  |    
T  22627022 cctaacaagacactctgtttctagatcactcgcgaggcgagagcctctgctcgccgtggcaagttcgggtcagatttccaaaggttcattctacaatctt 22627121  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22627122 tcgaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 22627177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 23648740 - 23648993
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgca-aaa 99  Q
    ||||||||||||| |||||||||| ||||| ||| | | | |||||||| |||||| |||||||||||||| || ||||||||||||||||||||| |||    
T  23648740 tcttaaacagcttaacagattataattaacatcatcattaggtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaa 23648839  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaa-gtttaattc------- 191  Q
     ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||| ||||||||| ||| || |||| ||||           
T  23648840 cctaacaagtcactctgtttctgggttactcacgaggcgagagcctctgatcgccatggcgagttc-ggtcagaattccaaaatgtttcattctaagtct 23648938  T
Q  192 ---caggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
       ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23648939 tttcaggtccaatctcatcctacattctttcctaatcattattagacatgttcag 23648993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 6759447 - 6759696
Alignment:
Q  5 aaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-ta 103  Q
    |||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||   | ||| |||| ||| || | |||||||| ||    
T  6759447 aaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagattgcaaaatccta 6759546  T
Q  104 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----------taattcc 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||           || ||||    
T  6759547 acaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttcc 6759646  T
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  6759647 aagttcaatctcattctacattctttcctaatcattattagacatgttca 6759696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 16092271 - 16092023
Alignment:
Q  5 aaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-ta 103  Q
    ||||| |||| || |||||| ||||| ||| | | |||||| |||  ||||| |||||||||||||  || ||| |||  ||| || |||||||||| ||    
T  16092271 aaacaacttcgcatattataattaacatcatccttaagtctcaatattaccccaaggttcaactcttaacaacttgtgtgacacagatcgcaaaatccta 16092172  T
Q  104 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaag------tttaa----ttcca 193  Q
    ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||      |||||    || ||    
T  16092171 acagggcactctgtttctgggtcactcgggaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttttttttaaatcttttca 16092072  T
Q  194 ggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  16092071 ggtttaatctcattctacattctttcctaatcattattagacatgttca 16092023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 22875256 - 22875502
Alignment:
Q  5 aaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-ta 103  Q
    |||||||||||||||||||| ||||| ||||| | |  ||| ||| |||||| |||||||||||||  || ||| |||| ||| || |||||||  | ||    
T  22875256 aaacagcttcacagattataattaacatcaccattacatctcaatactaccccaaggttcaactcttaacaacttgtgcgacatagatcgcaaagcccta 22875355  T
Q  104 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttcc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| |||||| |           ||||    
T  22875356 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattccca-aagtttcattctaaaatctttcc 22875454  T
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgtt 240  Q
    |||||||| ||| | ||||| ||||||||||||||||||| |||||||    
T  22875455 aggttcaacctcgttctacaatctttcctaatcattattaaacatgtt 22875502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 41598421 - 41598626
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||||||| || ||||||||  ||||| ||||||||||   |||||| || |||||  || ||||||||||||||||||||||||||    
T  41598421 ctaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcctctg 41598519  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccaggttcaatctcatcctacattctttcctaatcattattagacat 237  Q
    |||||| |||||||||||||||||| ||||| |||||| |           |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  41598520 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctttccaggttcaatctcattctacattctttcataatcattattagacat 41598618  T
Q  238 gttcaggc 245  Q
    ||||||||    
T  41598619 gttcaggc 41598626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7372957 - 7373191
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||| | | | |||| || ||||||||||| || ||||||||||||||||||||||||     
T  7372957 tcttaaacagcttcacagattataattaacatcctcattaagtctcactaccaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaac 7373056  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaat----------- 189  Q
    |||||||| ||||||||||||||||||||                     |||||||||||||||||||||||||  ||||||||| ||               
T  7373057 ctaacaagacactctgtttctgggtcact---------------------cgccgtggcgagttcaggtcagaatttcacaagtttcattctacaatctt 7373135  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7373136 tccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggc 7373191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 5866082 - 5865956
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| || |  || ||| ||||          ||||||||||||||| ||||||||||    
T  5866082 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattctaagtcttttcaggttcaatctcattctacattctt 5865984  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||    
T  5865983 tcctaatcattattagacatgttcaggc 5865956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 21255605 - 21255656
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtt 21255656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 17141302 - 17141355
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17141302 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 17141355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 21491382 - 21491434
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21491382 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 21491434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 21249767 - 21249818
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtt 240  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21249767 ttccaggttcagtctcatcctacattctttcctaatcattattagacatgtt 21249818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 21674091 - 21674147
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  21674091 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 21674147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 19801163 - 19801106
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||| || ||  | ||||||||||||||||||||||||||||||||    
T  19801163 attccaggttcaatcttattctctagtctttcctaatcattattagacatgttcaggc 19801106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 26355433 - 26355377
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||  || || ||| ||||||||||||||||||||||||||||    
T  26355433 ttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggc 26355377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 17141229 - 17141266
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  17141229 ctcgcgaggcgagagcctctgctcgccatggcgagttc 17141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 21249697 - 21249734
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21249697 ctcgcgaggcgagagcctctgctcgccatggcgagttc 21249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 38854987 - 38854930
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||| ||||| |  || || ||||||||||||||||||||||||||||||||    
T  38854987 attccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggc 38854930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 39834147 - 39834188
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  39834147 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 39834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 23760576 - 23760520
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    ||||||||||||||||||   | || | |||||||||||||||||||||||||||||    
T  23760576 attccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcagg 23760520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 15538745 - 15538796
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  15538745 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 15538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 24434046 - 24433995
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  24434046 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 24433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 43252110 - 43252145
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  43252110 ctcgcgaggcgagagcatctgctcgccgtggcgagt 43252145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 39834217 - 39834259
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattat 230  Q
    ||||||||||||||||||  ||||| |||||||||||||||||    
T  39834217 attccaggttcaatctcaatctacaatctttcctaatcattat 39834259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 21255535 - 21255572
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  21255535 ctcgcgaggcgagagccgctgctcgccatggcgagttc 21255572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 20527812 - 20527864
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  20527812 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 20527864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 21674021 - 21674061
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  21674021 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 21674061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 21972393 - 21972353
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  21972393 ctcgcggggcgagagcatctgctcgccgtggcgagtacagg 21972353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 21976478 - 21976438
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  21976478 ctcgcggggcgagagcatctgctcgccgtggcgagtacagg 21976438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 38855055 - 38855015
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  38855055 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 38855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 51773 - 52010
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||| ||| ||| ||||||| |||||||||||||| |||||||||||||||||    
T  51773 cagcttcacagattatagttaacctcactcttaagtcttaatcctacccaagggtccaattctcgacaactcgtgcaacaaaagtcgcaaaatctaacaa 51872  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||| ||||||||||||||||| ||    
T  51873 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagctcaggttagaatcccgtaagtttcattccaggttcaatctcgtc 51972  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||| |||||||||    
T  51973 ctacattctttcctaatcattattagacttgttcaggc 52010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 38801318 - 38801081
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||||| ||||||||||| ||||   | ||||||||||||||||||| |||||||||  |||| |||||| |||||||||||||||||||||||||    
T  38801318 cagcttcacaaattatagttaatctcattattaagtcttaatcctacccaagggttcaacttccgacaactcgtacaacaaaggtcgcaaaatctaacaa 38801219  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  38801218 gtcactctgtttctaggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagttcaattccaggttcaatcacatc 38801119  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38801118 ctacattctttcctaatcattattagacatgttcaggc 38801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 27250663 - 27250419
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||||||  | | |||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27250663 tcttaaacagcttcacagattataattaacctcttcattaagtatcaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 27250564  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
     |||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  27250563 ataacaagggactctgtttctgtgtcactcgcgaggcgagagcctctgctcgacgtggcgagttcaggtcagaatcccacaggtttcattccaggttcaa 27250464  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  27250463 tcccatcctacattctttcctaatcattattagacatgttcaggc 27250419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21026867 - 21027108
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||||||  | | |||||||||| ||||||||||||| ||  ||| || |||||||||||||||||||||||||    
T  21026867 tcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaat 21026966  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||    
T  21026967 ctaacaagtcactttgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagtttaggtcagaacctcacaagtttcattccaggttcaa 21027066  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  21027067 tctcatcctacattcttacctaatcattattagacatgttca 21027108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 20847151 - 20846909
Alignment:
Q  3 ttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct 102  Q
    ||||||||||||| ||||||| |||||||||  | | |||||||||| ||||||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  20847151 ttaaacagcttcatagattatggttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatct 20847052  T
Q  103 aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatc 202  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||    
T  20847051 aacaagtcactctgtttctgggtcactcgcgaggcaagagcctctgctcgccgtggcgagttcaggtcaaaacctcacaagtttcattccaggttcaatc 20846952  T
Q  203 tcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  20846951 tcatcctacattcttacctaatcattattagacatgttcaggc 20846909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22356108 - 22355864
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||| ||||| ||| | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||| ||||||    
T  22356108 tcttaaatagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaat 22356009  T
Q  101 ctaacaa-gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttca 199  Q
    ||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22356008 ctaacaatgtcactctgtttctaggtcactcgcgatgcga-agcctctgctcgccgtggcgagttcaggtcagaatcccacaaatttcattccaggttca 22355910  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22355909 atctcatcctacattctttcctaatcattattagacatgttcaggc 22355864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22357794 - 22357550
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||| ||||| ||| | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||| ||||||    
T  22357794 tcttaaatagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaat 22357695  T
Q  101 ctaacaa-gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttca 199  Q
    ||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22357694 ctaacaatgtcactctgtttctaggtcactcgcgatgcga-agcctctgctcgccgtggcgagttcaggtcagaatcccacaaatttcattccaggttca 22357596  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22357595 atctcatcctacattctttcctaatcattattagacatgttcaggc 22357550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 50210147 - 50209892
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  50210147 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaat 50210048  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |          |    
T  50210047 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctt 50209948  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50209947 tccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 50209892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 22354506 - 22354254
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| ||||| |||||||||| |||| || ||||||||||||||||||||||||     
T  22354506 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaac 22354407  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaat----------- 189  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||               
T  22354406 ctaacaagtcactctgtttctgggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcta 22354307  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  22354306 tccaggttcaatctcatcctacgttatttcctaatcattataagacatgttca 22354254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 34509967 - 34510222
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||| ||| | | |||||| ||| |||||| |||||||||| ||| || ||||||||||||||||||||||||     
T  34509967 tcttaaacagcttcaaagattataattaacatcatcattaagtctcaatactaccccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaaaa 34510066  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | ||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||          |  |    
T  34510067 cctaacatgacactctgtttctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctt 34510166  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34510167 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 34510222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22532456 - 22532711
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||| | |||  |||| ||| | | |||||| ||| |||||  |||||||||||||| ||  ||||||||||||||||||||||||    
T  22532456 tcttaaacagcttcacagttcataaataacatcatcattaagtctcaatactacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaat 22532555  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| | ||| |||||          |  |    
T  22532556 cctaacaagtcactctgtttttgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatcct 22532655  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22532656 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 22532711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20135374 - 20135626
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgca-aaa 99  Q
    |||||||||||||||||||||||| |||||  || | | | |||||| | |||||| |||||||||||||| || |||||| |||||||||||||| |||    
T  20135374 tcttaaacagcttcacagattataattaacaacatcattaggtcttactactaccctaaggttcaactctcaacaactcgtacaacaaaggtcgcataaa 20135473  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaa-gtttaa---------- 188  Q
     ||||||||||||||||||||||||| |||||||||| |||||| |||||||||| |||||||||| ||||||||| ||| || |||| |              
T  20135474 cctaacaagtcactctgtttctgggttactcgcgaggtgagagcttctgctcgccatggcgagttc-ggtcagaattccaaaatgtttcattctaagtct 20135572  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20135573 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttca 20135626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 51 - 243
Target Start/End: Original strand, 433244 - 433447
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||   |||||| || | ||   |||||||||||||||||||||||||||||    
T  433244 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttgcaactgggtcactcgcgaggcgagagcctctg 433342  T
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccaggttcaatctcatcctacattctttcctaatcattattagacat 237  Q
    |||||| |||||||||||||||||| ||||| |||||| |           |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  433343 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattaatagacat 433441  T
Q  238 gttcag 243  Q
    ||||||    
T  433442 gttcag 433447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 20918917 - 20919043
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  || || |||||          ||||||||||||||| ||||||||||    
T  20918917 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaatttaaattctaagtcttttcaggttcaatctcattctacattctt 20919015  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||    
T  20919016 tcctaatcattattagacatgttcaggc 20919043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 33681301 - 33681450
Alignment:
Q  105 caagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----taa-----ttccag 194  Q
    |||| ||||||||  |||||| | |||||||||||||||||||||||||| ||||||||||||||   | || || || ||     |||     ||||||    
T  33681301 caaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccag 33681400  T
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||| || || |||||||||||||||||||||||| ||||||    
T  33681401 gttcaatctcattctccaatctttcctaatcattattagacatattcagg 33681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 52927716 - 52927660
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || |||||| |||||||||||||||||||||||||    
T  52927716 ttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggc 52927660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 20248664 - 20248719
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| || |  ||||||||||||||||||||||||||||||||    
T  20248664 tccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggc 20248719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 21754350 - 21754392
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21754392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 21754423 - 21754477
Alignment:
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| | || || ||||||||||||||||||||||||||||||||    
T  21754423 ccaggttcaatctctttctccaatctttcctaatcattattagacatgttcaggc 21754477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 22921603 - 22921546
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| ||||||||||||  || || ||||||||||||||||||||||||||||||||    
T  22921603 attcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggc 22921546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 22238015 - 22238071
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||    
T  22238015 ttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggc 22238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 20091281 - 20091230
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    ||||||||| |||| | |||||||||| ||||||||||||||||||||||||    
T  20091281 ctcgcgaggtgagaacatctgctcgccatggcgagttcaggtcagaatccca 20091230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 20091206 - 20091153
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  20091206 caggtccaatctcatcttacattcactcctaatcaatattagacatgttcaggc 20091153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 20637165 - 20637206
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  20637165 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 20637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 21162080 - 21162121
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  21162080 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggt 21162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 21162117 - 21162170
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  21162117 caggttcaatctcattctacattctttcccaatcgttattagacttattcaggc 21162170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 12647166 - 12647217
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  12647166 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 12647217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 16375266 - 16375231
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  16375266 ctcgcgaggcgagagcatctgctcgccgtggcgagt 16375231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 21407653 - 21407688
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  21407653 ctcgcgaggcgagagcatctgctcgccgtggcgagt 21407688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 52639839 - 52639874
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  52639839 ctcgcgaggcgagagcatctgctcgccgtggcgagt 52639874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 20248592 - 20248633
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||| ||||||| |||||| ||||||||||||||    
T  20248592 ctcgcgaggcgatagcctctactcgccatggcgagttcaggt 20248633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 22921672 - 22921631
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtc 170  Q
    ||||||||||||||||||| |||||| ||||||||||| |||    
T  22921672 tcgcgaggcgagagcctctactcgccatggcgagttcaagtc 22921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 26065254 - 26065295
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  26065254 actcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 28194254 - 28194213
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| || ||| ||||||||||||||    
T  28194254 ctcgcgaggcgagagcctctacttgccatggcgagttcaggt 28194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 35981492 - 35981451
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| ||| || ||||||||||||||    
T  35981492 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 35981451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 52927786 - 52927745
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtc 170  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  52927786 tcgcgaggcgagggcctctactcgccatggcgagttcaggtc 52927745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 16758890 - 16758938
Alignment:
Q  53 acccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc 101  Q
    |||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  16758890 accccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatc 16758938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20524958 - 20524906
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  20524958 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 20524906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 21301245 - 21301217
Alignment:
Q  217 ttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||    
T  21301245 ttcctaatcattattagacatgttcaggc 21301217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 21438157 - 21438209
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  21438157 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 21438209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 23763574 - 23763626
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  23763574 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 23763626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 45310175 - 45310135
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  45310175 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 45310135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 32251 - 32495
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||| |||||||||||||||||| |||||||||   | ||||||||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||    
T  32251 tcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactagagcaacaaaggtcgcaaaat 32350  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    | || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  32351 caaaaaagtaactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaagtcagaatcccacaagtttaattccaggttcaa 32450  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  32451 tctcatcccacattctttcctagtcattattagacatgttcaggc 32495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 6803 - 7041
Alignment:
Q  7 acagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaaca 106  Q
    ||||||| ||||||||||  |||||| | | | || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6803 acagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaaca 6902  T
Q  107 agtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcat 206  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  6903 tgtcactctgtttatgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcat 7002  T
Q  207 cctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||| |||||||| ||||||||||| ||||||||    
T  7003 cctacattccttcctaataattattagacacgttcaggc 7041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 2178 - 2383
Alignment:
Q  40 aagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  2178 aagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttctaggtcactcgcgaggcga 2277  T
Q  140 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 239  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||    
T  2278 gagcctctgctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctacattccttcctaattattattagacacgt 2377  T
Q  240 tcaggc 245  Q
    ||||||    
T  2378 tcaggc 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 122 - 367
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaa- 99  Q
    ||||| ||| |||||||||||||| |||||||||   | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||     
T  122 tcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaaa 221  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttca 199  Q
    ||||||||||||||||  || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  222 tctaacaagtcactcttattatgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattccagattca 321  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  322 atctcatcctacattctttcctaatcattattagacatgttcaggc 367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 4898 - 5143
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaa- 99  Q
    ||||| ||| |||||||||||||| |||||||||   | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||     
T  4898 tcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaaa 4997  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttca 199  Q
    ||||||||||||||||  || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  4998 tctaacaagtcactcttattatgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattccagattca 5097  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5098 atctcatcctacattctttcctaatcattattagacatgttcaggc 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13398 - 13642
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||| ||| | | |||||||||| ||| || ||||||||||| ||||| |||||||||||||||||||||||||    
T  13398 tcttaaacagcttcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaactgtcgacaactcgtgcaacaaaggtcgcaaaat 13497  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  13498 ctaacaaggcactctgattctaggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatgccacaagtttcattccaggttcag 13597  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  13598 tctcatcctacattctttcctaatcattattagacattttcaggc 13642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 3668 - 3912
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||| ||||  | | |||||||||| ||||||||||||||||||||| || |||||||||||||||||| |||| |    
T  3668 tcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcacaaagt 3767  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    || ||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  3768 ctcacaaggcactctgtttccgggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 3867  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  3868 tctcatcctacattctttcctaatcattactagtcatgttcaggc 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7732 - 7976
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||| ||||  | | |||||||||| ||||||||||||||||||||| || |||||||||||||||||| |||| |    
T  7732 tcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcacaaagt 7831  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    || ||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  7832 ctcacaaggcactctgtttccgggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaa 7931  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  7932 tctcatcctacattctttcctaatcattactagtcatgttcaggc 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 16473 - 16710
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||||||||||||||||||||||   | |||||||||||||||||||  |||||||||||||  | |||||||||||||||| ||||||| |||||    
T  16473 cagcttcacagattatagttaacctcattattaagtcttaatcctacccaagcgttcaactctcgagaaatcgtgcaacaaaggtcacaaaatccaacaa 16572  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||| ||||||||||||| ||    
T  16573 gtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtgccgagttctggtcaaaatcccataagtttaatttcaggttcaatctcgtc 16672  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16673 ctacattctttcctaatcattattagacatgttcaggc 16710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 20595 - 20845
Alignment:
Q  6 aacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaac 105  Q
    ||||||||||||||||||||||||| ||| | | |||||||||| |||  | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20595 aacagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaac 20694  T
Q  106 aagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccag 194  Q
    ||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||    
T  20695 aaggcactctgtttctaggtcgctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttccag 20794  T
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20795 gttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 20845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 1101 - 1345
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| |||||||||||||| ||| ||||  | | |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||| |    
T  1101 tcttaaacatcttcacagattataattagcctcttcattaagtcttaatactacccaaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaagt 1200  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    || ||||| |||| |||||| |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  1201 ctcacaaggcactttgtttccgggtcactcgtgaggcgagagcctctgctcgccatggcgagttctggtcagaatcccacaagtttcattccaggttcaa 1300  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  1301 tctcatcctacattctttcctaatcattattagtaatgttcaggc 1345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 47212 - 47415
Alignment:
Q  40 aagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 139  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||| || |||||||||||||||||||    
T  47212 aagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgccatttctaacaagtcactctggttttgggtcactcgcgaggcga 47311  T
Q  140 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 239  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  47312 gagcctctgcgctccgtggcgagctcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattcattcctaatcattattagacatat 47411  T
Q  240 tcag 243  Q
    ||||    
T  47412 tcag 47415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 43 - 245
Target Start/End: Complemental strand, 5023 - 4821
Alignment:
Q  43 tcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagag 142  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||     
T  5023 tcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtctcaaaatccaataagtcactctgtttctgtgtcactcgcgaggcgagat 4924  T
Q  143 cctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||| |  |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4923 cctctgctctctttggcgagttcaggtcagaatcccataagttcaattccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 4824  T
Q  243 ggc 245  Q
    |||    
T  4823 ggc 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 38947 - 39201
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||||     
T  38947 tcttaaacagcttcacagattataattaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 39046  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |          |    
T  39047 cctaacaagtcactatgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat-ccacaagtttcattcaaaatctt 39145  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39146 tccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 39201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 152; Significance: 1e-80; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 124772 - 125024
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  124772 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 124871  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |    
T  124872 ctaacaagacactctttttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 124971  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  124972 tccaggttc---ctcatcctacattctttcctaatcattattagacatgttcaggc 125024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 62947 - 63000
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  62947 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttca 63000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 136173 - 136132
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  136173 actcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 144881 - 144840
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  144881 actcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 3657 - 3910
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||| ||  | | |||||||||| |||||| || |||||| |||| || ||||||||||||||||||||||||     
T  3657 tcttaaacagcttcatagattataattaacatcctcattaagtcttaatactaccccaaagttcaattctcaacaactcgtgcaacaaaggtcgcaaaac 3756  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----------taat 189  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | ||    
T  3757 ctaacaactcactctgtttttgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcat 3856  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3857 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 3910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 529 - 784
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| | |||||| ||||| ||  | | |||||| ||| |||||| |||||||||||||| || |||| |||||||||||| ||||||     
T  529 tcttaaacagcttcatatattataattaacatcctcattaagtctcaatactaccccaaggttcaactctcaacaactcatgcaacaaaggttgcaaaaa 628  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| || ||| |||||| |               
T  629 cctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcag-attccaaaagtttcattctaaattct 727  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  728 ttctaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 24235 - 23981
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  |   |||||||||| ||| || || |||||||||||||| |||||||||||||||||||||||||    
T  24235 tcttaaacagcttcacagattataattaacatcctcaataagtcttaatactatcccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 24136  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------tt 190  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |          ||    
T  24135 ctaacaaggcactttgtttctaggtcactcgcgaggcgagagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctacaatttt 24036  T
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24035 ccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggc 23981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 64150 - 64201
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  64150 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 64201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5036 - 5276
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||||||||||| ||||| |  | | |||||||| | ||| ||||||||| ||  ||| || ||||||||||||||||| ||||||     
T  5036 tcttaaacagcttcacagattatagctaaccccttcattaagtcttattgctagccaaaggtttaatcctcaacaactcgtgcaacaaaggtggcaaaa- 5134  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  5135 ctaacaagtcactctgtttctaggtcactcgcgaggcaagagcctctactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaa 5234  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  5235 tctcatcctacattctttcctaatcattattagacatcttca 5276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 245
Target Start/End: Complemental strand, 51813 - 51563
Alignment:
Q  6 aacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaac 105  Q
    |||||||||||| ||| || ||||  |||  || |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51813 aacagcttcacaaattgtaattaatatcatattcaagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaac 51714  T
Q  106 aagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------ttccag 194  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |           ||||||    
T  51713 aagtcactctgtttctgggtcactagcgaggtgagagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttccag 51614  T
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  51613 gttcaatctcatcctacattctctcctaatcattattaaacatgttcaggc 51563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 32921 - 32978
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||| |||||||||||  ||| | ||||||||||||||||||| ||||||||||||    
T  32921 attccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggc 32978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 32826 - 32892
Alignment:
Q  103 aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||| || |||||  ||||||  ||||||||||||| |||||| |||||| ||||||||||||||    
T  32826 aacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggt 32892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 1480 - 1717
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||| ||||||||||||||||||   | ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| || |||||    
T  1480 cagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaactccaacaa 1579  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||||||||||||| | ||    
T  1580 gtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtcgcgagttcagtttagaattccataagtttaattccaggttcaatcacgtc 1679  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||  | ||  ||||||| ||||||||||||||||||    
T  1680 ctaccctattcactaatcaatattagacatgttcaggc 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 7457 - 7694
Alignment:
Q  8 cagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatctaacaa 107  Q
    |||||||| ||||||||||||||||||   | ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| || |||||    
T  7457 cagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaactccaacaa 7556  T
Q  108 gtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatc 207  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||||||||||||| | ||    
T  7557 gtcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtcgcgagttcagtttagaattccataagtttaattccaggttcaatcacgtc 7656  T
Q  208 ctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||  | ||  ||||||| ||||||||||||||||||    
T  7657 ctaccctattcactaatcaatattagacatgttcaggc 7694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13279 - 13534
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||| ||||||||||||| ||||| ||  | | |||||  ||| |||||| || ||||||||||| || ||||||||||||||||||||||||     
T  13279 tcttaaacagtttcacagattataattaacatcttcattaagtcccaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaac 13378  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc--------- 191  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             
T  13379 ctaacaagacactcagtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 13478  T
Q  192 --caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
      ||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13479 ttcagattcaatctcatcctacattctttcctaatcataattagacatgttcaggc 13534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 34437 - 34562
Alignment:
Q  129 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattcttt 218  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| || |  || ||| ||||          ||||||||||||||| |||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctccaaattttcattctaagtcttttcaggttcaatctcattctacattcttt 34535  T
Q  219 cctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||    
T  34536 cctaatcattattagacatgttcaggc 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 2038 - 2293
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||| |||||||||||||||| ||||| ||  | | |||||||||| ||| || ||||||||||||||||| |||||||||||||||||| ||||||    
T  2038 tcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaat 2137  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-----------t 189  Q
    |||||||| ||||||||||  |||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |           |    
T  2138 ctaacaaggcactctgttttagggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctt 2237  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2238 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 2293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 207324 - 207198
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  |||||| ||||          |||||||||||||||||||||||||     
T  207324 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattctc 207226  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||||||||||||||||    
T  207225 tcctaatcaatattagacatgttcaggc 207198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 6055 - 5800
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||  ||||| ||||| ||| | | |||||||||| ||| || ||||||| ||||||||  |||||||||||||||||||||||||    
T  6055 tcttaaacagcttcacattttataattaacatcatcattaagtcttaatgctatcccaaggttccactctcgataactcgtgcaacaaaggtcgcaaaat 5956  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaatt---------- 190  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| |||              
T  5955 ctaacaaggcactctgtttctgggtcactaacgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccgcaaatttcattcaataatctt 5856  T
Q  191 -ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5855 cccaggttcaatctcatcctacaatctttcctaatcattattagacatgttcaggc 5800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 8665 - 8917
Alignment:
Q  4 taaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatcta 103  Q
    |||||||||||||||||| || ||||| ||| | | |||||||||| |||| | |||||||||||||| || |||||||||||||||||||||||| |||    
T  8665 taaacagcttcacagattgtaattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaccta 8764  T
Q  104 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt-----------taattcc 192  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||           |  |||     
T  8765 acaagacactctgtttctgggtcattcgcgaggcgagagcctctactggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttct 8864  T
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  8865 aggttcaatctcatcctacattctttcctaatcactattagacatattcaggc 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 21098 - 21332
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||| ||||| ||||| ||  | | |||||||||| ||||||||||||||||||||   | ||||||||||||||||||||||||     
T  21098 tcttaaacagcttcacaggttataattaacatcttcattaagtcttaatactacccaaaggttcaactctgatcaactcgtgcaacaaaggtcgcaaaac 21197  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaa 200  Q
      ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||          |||||||| ||||||||| |||    
T  21198 tcaacaagtcactctgtttttgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcagg----------acaagtttcattccaggtacaa 21287  T
Q  201 tctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  21288 tctcatcctacattctttcataatcattattagacatgttcaggc 21332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17149 - 16894
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||| |||||||||| ||||| |||   | |||||| ||| |||||| |||||| ||||||| || |||||||||||||||||||||||||    
T  17149 tcttaaacagctttacagattataattaacatcatgattaagtctcaatactaccccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaat 17050  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------t 189  Q
    | ||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| |          |    
T  17049 cctaataaggtactctgtttctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctt 16950  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16949 tccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 16894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 79096 - 79044
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||||||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttca 79044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 339884 - 339630
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||| ||  || ||||||||||||||||||||||||     
T  339884 tcttaaacagcttcacagattataattaacgtcatcattaagtctcaatactaccccaaggttcaacccttaacgactcgtgcaacaaaggtcgcaaaac 339785  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taatt 190  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||          |  ||    
T  339784 ctaacaaggcactctatttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagttcattctacaatcttt 339685  T
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  339684 ccaggttcaatctcatcctacattcattcctaatcattattagacaaattcaggc 339630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 25999 - 25744
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||| ||| | | |||||| ||| |||||| |||||||| ||||   | |||||||||||||||||||||||||    
T  25999 tcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaat 25900  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taat 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| || ||          |  |    
T  25899 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatctt 25800  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25799 ttcaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 25744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33429 - 33173
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| || ||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||  || ||| ||   ||| || |||||||||    
T  33429 tcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtatgacacagatcgcaaaat 33330  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | | ||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| | ||| |||||| |               
T  33329 cctgacaaggcactctgtttctgggtcacacgcgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatct 33230  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33229 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtccaggc 33173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8467 - 8211
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctaccca-aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaa 99  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||  ||| ||||||  || ||||||||||| || ||||||||||| ||||||||||||    
T  8467 tcttaaacagcttcacagattataattaacatcctcattaagtcccaatactacccccaacgttcaactctcaacaactcgtgcaacgaaggtcgcaaaa 8368  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
     |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||| ||| |||||| |               
T  8367 cctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctactcaccgtggcgagtttaggccagaattccaaaagtttcattctacaatct 8268  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 8211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 40102 - 40353
Alignment:
Q  4 taaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaa-atct 102  Q
    |||| |||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||| || ||||||||||||||||||||||| | ||    
T  40102 taaagagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacct 40201  T
Q  103 aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttta------attc---ca 193  Q
    ||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||| |      | ||   ||    
T  40202 aacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctgtca 40301  T
Q  194 ggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  40302 ggttcaatctcatcctacattccttcctaatcattaataaacatgttcaggc 40353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 18464 - 18413
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  18464 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 18413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 23069 - 23324
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgc-aaaa 99  Q
    ||||||||||||||||||||||||  |||| ||| | | |||||| ||| |||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  23069 tcttaaacagcttcacagattataaataacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaa 23168  T
Q  100 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca-----caagttta-----at 189  Q
     |||||||| |||||||||||| |||||||||||||||||| |||||||||||| |||||||| |||| ||||||| |||     ||| | ||      |    
T  23169 cctaacaagacactctgtttctaggtcactcgcgaggcgagggcctctgctcgctgtggcgagctcagttcagaattccaaaattcaattctacaatctt 23268  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23269 tccagatccaatctcatcctacattctttcctaatcattattagacatgttcaggc 23324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 103; Significance: 2e-51; HSPs: 7)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 40044 - 40298
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| |||||| ||||| ||  | | |||||| ||| |||||||| |||||||||||| || | | |||||||||||||||||||||    
T  40044 tcttaaacagcttcacaaattataattaacatcctcattaagtctcaatgctacccaa-ggttcaactctcaacaaattgtgcaacaaaggtcgcaaaat 40142  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | ||||||| ||||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||  ||| |||||| |               
T  40143 cataacaaggcactcggtttctaggtcacccgcgaggcgagagcctctgctcgccgtggcgagtacaggttagaa-accaaaagtttcattctacaatct 40241  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggc 40298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26082 - 26213
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||| ||| |||||| |||||||||||||| || | |||||||||||||||||||||||    
T  26082 tcttaaacagcttcacagattataattaacatcctcattaagtctcaatgctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaat 26181  T
Q  101 -ctaacaagtcactctgtttctgggtcactcg 131  Q
     |||||||| ||||  ||||||||||||||||    
T  26182 cctaacaaggcacttggtttctgggtcactcg 26213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 26611 - 26662
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26611 ttccaggtttaatctcatcctacattctttcctaatcattattagacatgtt 26662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 39666 - 39611
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcagg 39611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 59235 - 59182
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  59235 caggttcaatctcattctacattctgtcctaatcattattagacatgttcaggc 59182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 59308 - 59271
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  59308 ctcgcgaggcgagagcctctgctcgccatggcgagttc 59271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 26555 - 26589
Alignment:
Q  143 cctctgctcgccgtggcgagttcaggtcagaatcc 177  Q
    ||||||||||||||||||| |||||||||||||||    
T  26555 cctctgctcgccgtggcgacttcaggtcagaatcc 26589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 97; Significance: 9e-48; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 4694 - 4950
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||  || ||| |||| |||  | |||||||||    
T  4694 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaat 4793  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | |||| ||  || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| |||||| |               
T  4794 cctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaaatc 4892  T
Q  189 -ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  4893 tttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 4950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12276 - 12532
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||  || ||| |||| |||  | |||||||||    
T  12276 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaat 12375  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | |||| ||  || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| |||||| |               
T  12376 cctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaaatc 12474  T
Q  189 -ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  12475 tttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 12532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22228 - 22484
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||  || ||| |||| |||  | |||||||||    
T  22228 tcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaat 22327  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    | |||| ||  || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| |||||| |               
T  22328 cctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaaatc 22426  T
Q  189 -ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
     |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  22427 tttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 22484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 16534 - 16278
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||||| |||| ||||| ||| | | |||||| ||| |||||| ||||||||||||   || ||| |||| ||| || |||||||||    
T  16534 tcttaaacagcttcacagactataattaacatcatcattaagtctcaatactaccccaaggttcaactcctaacaacttgtgcgacacagatcgcaaaat 16435  T
Q  101 ct-aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------- 188  Q
    |  |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| | ||| | |||| |               
T  16434 cccaacaaggcactctgtttttgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatct 16335  T
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  16334 ttccaggttcaatctcattctaaattctttcctaatcattattagacatgttcaggc 16278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17921 - 17687
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||| ||||| ||  | | |||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||     
T  17921 tcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaac 17822  T
Q  101 ctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaat----------- 189  Q
    ||||||||||||||| ||||||||| |||                     |||||||||||||||||||||||||||||||||||| ||               
T  17821 ctaacaagtcactctatttctgggtgact---------------------cgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcta 17743  T
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17742 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 17687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 897 - 641
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||||| || |||  || | ||||| | |||||| ||| |||||  |||||||||||||| ||  |||||||||||||||||| |||||    
T  897 tcttaaacagcttcacatatcataaatagcatcaccattaagtctcaatactacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgaaaaat 798  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga-atcccacaagtttaatt-------- 190  Q
    | ||||||| | |||||||||| |||||||| ||||||| || |||||||||||| ||||||||||||||||||  ||| |||||||| |||            
T  797 cctaacaagactctctgtttctaggtcactcacgaggcgggaacctctgctcgccatggcgagttcaggtcagatttccaacaagtttcattctctacta 698  T
Q  191 --ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
      |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  697 aaccaggttcaatctcgttctacaatctttcctaatcattattagacatgttcaggc 641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 87; Significance: 8e-42; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 16331 - 16529
Alignment:
Q  58 aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 156  Q
    |||||||||||||| || |||||||||||||||||||||||| | ||||||| | |||||||||||||||||| |||||| ||| ||||||| |||||||    
T  16331 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcacttgcgaggtgagggcctctgatcgccgt 16430  T
Q  157 ggcgagttcaggtcagaatccca-----caagttta-----attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||| |||| ||||||| |||     ||| | ||      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16431 ggcgagctcagttcagaattccaaaattcaattctacaatctttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggc 16529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 32843 - 32729
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgc 149  Q
    |||||| |||||||||||||  || | | |||| ||| || |||||||||| ||||||| || ||||||| |||||||||||||||||| |||||||| |    
T  32843 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctctcc 32744  T
Q  150 tcgccgtggcgagtt 164  Q
    |||| ||||||||||    
T  32743 tcgctgtggcgagtt 32729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 46162 - 46276
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgc 149  Q
    |||||| |||||||||||||  || | | |||| ||| || |||||||||| ||||||| || ||||||| |||||||||||||||||| |||||||| |    
T  46162 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctctcc 46261  T
Q  150 tcgccgtggcgagtt 164  Q
    |||| ||||||||||    
T  46262 tcgctgtggcgagtt 46276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 32691 - 32640
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| || || || |||||||||||||||||||||||||||    
T  32691 caggttcaatctcattctccagtccttcctaatcattattagacatgttcag 32640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 46314 - 46365
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||| || || || |||||||||||||||||||||||||||    
T  46314 caggttcaatctcattctccagtccttcctaatcattattagacatgttcag 46365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 182 - 346
Alignment:
Q  92 tcgcaaaatc-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa-- 188  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||  | | |||||| |      
T  182 tcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcatt 281  T
Q  189 --------ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  282 ctaaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 39663 - 39836
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||| |||   | |||||| ||| |||||| |||||||||| ||  || ||| |||| ||| || |||||||||    
T  39663 tcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaat 39762  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 173  Q
    | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39763 cctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 39836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 75149 - 74976
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||||||||| |||||||| ||||| |||   | |||||| ||| |||||| |||||||||| ||  || ||| |||| ||| || |||||||||    
T  75149 tcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaat 75050  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 173  Q
    | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  75049 cctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 74976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 28017 - 28192
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    ||||||||| |||||||| ||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||  || ||| |||| ||| || | |||||||    
T  28017 tcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagattgcaaaat 28116  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 175  Q
    | | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28117 cctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctttgctcgccgtggcgagttcaggtcagaat 28192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 28924 - 28977
Alignment:
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagacatgttcagg 28977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 10350 - 10525
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat 100  Q
    |||||||||||||||||||||||  ||||| |||   | |||||| ||| |||||| |||||||||||||  || ||| |||| ||| || |||||||||    
T  10350 tcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagatcgcaaaat 10449  T
Q  101 c-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 175  Q
    | ||||||| |||| ||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  10450 cctaacaaggcactttgtttctaggtcactcgcgaggcgggaagctctgctcgccgtggcgagttcaggtcagaat 10525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 245
Target Start/End: Complemental strand, 1947 - 1756
Alignment:
Q  65 aactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgag 162  Q
    ||||||| || |||||||| |||||| ||||||||||   |||||| || |||||  ||||||||||||||||||||||||||||||||||| ||||||     
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaa 1849  T
Q  163 ttcaggtcagaatcccacaagtttaattc-----------caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||| | ||| |||||| ||||           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1848 ttcaggtcagatttcca-aagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 1756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 13383 - 13287
Alignment:
Q  149 ctcgccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| ||| |||||||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13383 ctcgccggggcaagttcaggtcaggatcccacaagtttcatttcaggctcaatctcatcctacattctttcctaatcattattagacatgttcaggc 13287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 245
Target Start/End: Complemental strand, 837 - 692
Alignment:
Q  110 cactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taattccaggttca 199  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | ||| |||||          |  || ||| ||||    
T  837 cactctgtttctgggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattca 738  T
Q  200 atctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  737 atctcattctacattctttcctaatcattattagacatgttcaggc 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3085 - 2987
Alignment:
Q  1 tcttaaacagcttcacagattatagttaacctcaccttaaagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaa 99  Q
    |||||||||||||||||| ||||| ||||| ||| | | |||||| ||| |||||| |||||||||||||| || |||||||||||| |||||||||||    
T  3085 tcttaaacagcttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacacaggtcgcaaaa 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 17024 - 17222
Alignment:
Q  58 aaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 155  Q
    ||||||||||| || || |||||||| |||||| ||||||||||   ||||||| | |||||   | ||||||||||||||||||||||||||||||||     
T  17024 aaggttcaactatcaacgactcgtgctacaaagatcgcaaaatcctaaacaagt-attctgtaaataggtcactcgcgaggcgagagcctctgctcgcca 17122  T
Q  156 tggcgagttcaggtcagaatcccacaagtttaattc-----------caggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    |||||||||||||||| | || || |||||| ||||           ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  17123 tggcgagttcaggtcatattctca-aagttttattctaaaatctatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcagg 17221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 7506 - 7471
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaat 224  Q
    ||||||||||||||||||||||||||||||||||||    
T  7506 ttccaggttcaatctcatcctacattctttcctaat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 7576 - 7537
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 167  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  7576 ctcgcgaggcgagagcctctgcttgccatggcgagttcag 7537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 20426 - 20554
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattct 216  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||  ||| |||||| ||||          |||||||||||| || |||||||||    
T  20426 actcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatctttccaggttcaatcttattctacattct 20525  T
Q  217 ttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||    
T  20526 ttcctaatcattattagacatgttcaggc 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 2820 - 2764
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 2764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 344 - 470
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt----------taattccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  |||||          || |||||||||||||||||||||||||||||    
T  344 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagttccattctaagtatttccaggttcaatctcatcctacattctt 442  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||||||||||||||||    
T  443 tcctaatcaatattagacatgttcaggc 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 18693 - 18637
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 18637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 245
Target Start/End: Complemental strand, 15426 - 15294
Alignment:
Q  123 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaat-----------tccaggttcaatctcatcctac 211  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| |||||| ||           ||||| ||||||||||| ||||    
T  15426 ggtcactcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccagattcaatctcattctac 15328  T
Q  212 attctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||| |||| |||||||    
T  15327 attctttcctaatcattattaaacatattcaggc 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 4749 - 4872
Alignment:
Q  40 aagtcttaatcctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaat-ctaacaagtcactctgtttctgggtcactcgcgaggcg 138  Q
    |||||| ||| |||||  |||||||||||||  || ||||||||||||||||||||||||| |||||| | || |||||||||||||  || ||||||||    
T  4749 aagtctcaatactacctcaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcgaggcg 4848  T
Q  139 agagcctctgctcgccgtggcgag 162  Q
    ||||||| |||||||| |||||||    
T  4849 agagcctttgctcgccatggcgag 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 10200 - 10251
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  10200 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 10251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 4912 - 4965
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| ||||| |||| |||| |||||| |||||||||| ||||    
T  4912 caggttcaatctcattctacaatcttccctagtcattaatagacatgtttaggc 4965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 12611 - 12488
Alignment:
Q  131 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctttcc 220  Q
    |||||||||||||||||||||||| |||||||||||| ||||| || |  |||||| ||||          |||||||||||||||||||||||||||||    
T  12611 gcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattctatgtctttccaggttcaatctcatcctacattctttcc 12513  T
Q  221 taatcattattagacatgttcaggc 245  Q
    |||||| ||||||||||||||||||    
T  12512 taatcaatattagacatgttcaggc 12488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 6625 - 6561
Alignment:
Q  104 acaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6625 acaaggcactctatttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcagg 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 6557 - 6507
Alignment:
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6557 gttcaatctcattctacattctttcctaatcattattagacatgttcaggc 6507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 2250 - 2124
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaattc----------caggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| || |  || ||| ||||          ||||||||||||||| ||||||||||    
T  2250 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattctaagtcttttcaggttcaatctcattctacattctt 2152  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||||||||||||    
T  2151 tcctaatcattattagacatgttcaggc 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 8029 - 7973
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8029 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggc 7973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 8099 - 8062
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8099 ctcgcgaggcgagagcctctgctcgccatggcgagttc 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 80137 - 80011
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| || |||||||| |||||| || |  |||||| |          |||||||||||||||||||||||||||||    
T  80137 ctcgcgaggcgagagcctctgctcgccatgtcgagttca-gtcagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattctt 80039  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||||||||||||||||    
T  80038 tcctaatcaatattagacatgttcaggc 80011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 243
Target Start/End: Original strand, 12166 - 12368
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc-taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgc 149  Q
    |||||| |||||||||||||| || |||||||  |||||| |||||||||| |||  ||    |||||   ||||  |||||||||| |||||||||| |    
T  12166 ctaccccaaggttcaactctcaacgactcgtgtgacaaagatcgcaaaatcctaaacagggcttctgtaattgggcaactcgcgaggtgagagcctctac 12265  T
Q  150 tcgccgtggcgagttcaggtcagaatcccacaagtt------taatt---ccaggttcaatctcatcctacattctttcctaatcattattagacatgtt 240  Q
    ||||| |||||||||||||||||  ||| | |||||      |||||   |||||||||||||||| ||||||||||||||||||||||||| |||| ||    
T  12266 tcgccatggcgagttcaggtcagtttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttcctaatcattattaaacatatt 12365  T
Q  241 cag 243  Q
    |||    
T  12366 cag 12368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 244
Target Start/End: Complemental strand, 20228 - 20106
Alignment:
Q  131 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtt------taatt---ccaggttcaatctcatcctacattctttcct 221  Q
    ||||||||||||||||| |||||| |||||||||||||||||  ||| | |||||      |||||   |||||||||||||||| ||||||||||||||    
T  20228 gcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttcct 20129  T
Q  222 aatcattattagacatgttcagg 244  Q
    | ||||||||| |||||||||||    
T  20128 actcattattaaacatgttcagg 20106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 29011 - 28959
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29011 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggc 28959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 10226 - 10352
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttt------aa----ttccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |  ||||||      ||    |||||||||||||||||||||||||||||    
T  10226 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttccttctaagtctttccaggttcaatctcatcctacattctt 10324  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| || |||||||||| ||||    
T  10325 tcctaatcaataatagacatgtttaggc 10352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 437 - 486
Alignment:
Q  120 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  437 ctgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 516 - 572
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||| |||||||||||| || || ||||||||||||||||||||||||||| ||||    
T  516 ttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggc 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 16047 - 16100
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  16047 caggttcaatctcattctacattctttcctaatcattattagacatattcaggc 16100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 15974 - 16011
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 165  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15974 ctcgcgaggcgagagcctctgctcgccatggcgagttc 16011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 7197 - 7253
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  7197 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 7126 - 7167
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||| |||||||||||||| |||||| ||||||||||||||    
T  7126 ctcgcaaggcgagagcctctactcgccatggcgagttcaggt 7167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 9639 - 9513
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| || |||||||| |||||| || |  |||||| |          |||||| ||||||||||||||||||||||    
T  9639 ctcgcgaggcgagagcctctgctcgccatgacgagttca-gtcagattctccaaagtttcattctaagtctttccagattcaatctcatcctacattctt 9541  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    || |||||| ||||||||||||||||||    
T  9540 tcgtaatcaatattagacatgttcaggc 9513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 32469 - 32525
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  32469 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 32525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 32397 - 32439
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  32397 actcgcgaggtgagagcctctgctcgccatggcgagttcaggt 32439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 24456 - 24330
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttaa----------ttccaggttcaatctcatcctacattctt 217  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |  |  |||||| |          ||| |||||||||||||||||| ||||||    
T  24456 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattatccaaagtttcattctaagtctttctaggttcaatctcatcctaaattctt 24358  T
Q  218 tcctaatcattattagacatgttcaggc 245  Q
    ||||||||| ||||||||||||||||||    
T  24357 tcctaatcaatattagacatgttcaggc 24330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 133039 - 133095
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  133039 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 133095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 132967 - 133009
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 133009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 58527 - 58492
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  58527 ctcgcgaggcgagagcatctgctcgccgtggcgagt 58492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 10540 - 10583
Alignment:
Q  199 aatctcatcctacattctttcctaatcattattagacatgttca 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10540 aatctcatcctacattctttcctaatcattattagacatgttca 10583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 101781 - 101836
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  101781 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 101836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 101709 - 101753
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtca 171  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||    
T  101709 actcccgaggcaagagcctctgctcgccatggcgagttcaggtca 101753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 161072 - 161127
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  161072 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 161127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 3317 - 3374
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  || || ||||||||||||||||||||||||||||||||    
T  3317 attccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggc 3374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 19573 - 19622
Alignment:
Q  120 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19573 ctgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggt 19622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 19652 - 19708
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||||| || || || |||||||||||||||||||||||||||||    
T  19652 ttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggc 19708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 28540 - 28488
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  28540 aggttcaatctcattctccaatctttcctaatcattattagacatgttcaggc 28488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 28616 - 28574
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 28574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 2378 - 2323
Alignment:
Q  190 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||  || || ||||||||||||||||||||||||||||||||    
T  2378 tccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggc 2323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 2030 - 1982
Alignment:
Q  195 gttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    |||||||||||| || || ||||||||||||||||||||||||||||||    
T  2030 gttcaatctcattctccaatctttcctaatcattattagacatgttcag 1982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 2108 - 2066
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  2108 actcgcgaggcgagagcctctgcttgccatggcgagttcaggt 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 2535 - 2483
Alignment:
Q  192 caggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    ||||||||| ||||| || || |||||||||||||||||||||||||||||||    
T  2535 caggttcaaactcattctccaatctttcctaatcattattagacatgttcagg 2483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 2609 - 2567
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggt 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 9462 - 9518
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  9462 ttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggc 9518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 9391 - 9432
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  9391 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 12380 - 12435
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcag 243  Q
    ||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||||    
T  12380 attccaggttcaatctcaatctaaaatctttcctaatcattattatacatgttcag 12435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 45522 - 45468
Alignment:
Q  191 ccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||| |  || |||||||||||||||||||||||| |||||||    
T  45522 ccaggttcaatctcattccccaatctttcctaatcattattagacatattcaggc 45468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 45596 - 45555
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  45596 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 45555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 6922 - 6979
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  || || ||||||||||| |||||||||||||| |||||    
T  6922 attccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggc 6979  T

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Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 5978 - 6035
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||| |||||||||||  || || |||||||||||||||||||||| |||||||||    
T  5978 attccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggc 6035  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 13325 - 13382
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||||||| |  || || |||||||||||||| |||||||||||||||||    
T  13325 attccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggc 13382  T

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Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 13255 - 13296
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||| |||||| |||||| ||||||||||||||    
T  13255 ctcgcgaggcgagggcctctactcgccatggcgagttcaggt 13296  T

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Target: scaffold0138; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 29950 - 29898
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  29950 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 29898  T

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Target: scaffold0138; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 41946 - 41894
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  41946 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 41894  T

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Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 43520 - 43463
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | ||||| |||||||| |||||||||||||||||    
T  43520 attccaggttcaatctcaatctagaatcttttctaatcataattagacatgttcaggc 43463  T

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Target: scaffold0116; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 47440 - 47383
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | ||||| |||||||| |||||||||||||||||    
T  47440 attccaggttcaatctcaatctagaatcttttctaatcataattagacatgttcaggc 47383  T

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Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 10913 - 10970
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  |||   ||||||||||||||||||| ||||||||||||    
T  10913 attccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggc 10970  T

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Target: scaffold0078; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 10842 - 10884
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  10842 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 10884  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 227877 - 227934
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | ||||||||||||||||||| ||||||| ||||    
T  227877 attccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggc 227934  T

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Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 225644 - 225694
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc 101  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  225644 ctaccccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatc 225694  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 130222 - 130263
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  130222 ctcgcgaggcgagagcctctgctcgccatggcgagtttaggt 130263  T

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Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 60520 - 60479
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  60520 actcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 130292 - 130349
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | ||||| |||||||| | |||||||||||||||    
T  130292 attccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggc 130349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 755 - 707
Alignment:
Q  197 tcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||  ||||| ||||||||||||||||||| ||||||||||||    
T  755 tcaatctcaatctacaatctttcctaatcattattatacatgttcaggc 707  T

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Target: scaffold0555 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 897 - 944
Alignment:
Q  132 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||| | |||||||||| ||||||||||||| ||||||||||    
T  897 cgaggcgagaacatctgctcgccatggcgagttcagggcagaatccca 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 10347 - 10305
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  10347 actcgcgaggcgagagcctctactcgctttggcgagttcaggt 10305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 965 - 1017
Alignment:
Q  189 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttc 241  Q
    |||||||| | |||||||| |||||||  ||||||||| ||||||||||||||    
T  965 ttccaggtcctatctcatcttacattcactcctaatcaatattagacatgttc 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 4910 - 4875
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  4910 ctcgcgaggcgagagcatctgctcgccgtggcgagt 4875  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 21614 - 21563
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  21614 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 21563  T

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Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 29506 - 29455
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 179  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  29506 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 29455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 61421 - 61386
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    |||||||||||||||| |||||||||||||||||||    
T  61421 ctcgcgaggcgagagcatctgctcgccgtggcgagt 61386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 65337 - 65304
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcga 161  Q
    |||||||||||||||| |||||||||||||||||    
T  65337 ctcgcgaggcgagagcatctgctcgccgtggcga 65304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 7864 - 7822
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 169  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  7864 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 7822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 15983 - 15866
Alignment:
Q  51 ctacccaaaggttcaactctcgaccactcgtgcaacaaaggtcgcaaaatc--taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 148  Q
    |||||||||||||||||||   || ||| |||| |||||| ||||||||||   |||||| || |||||  |||||  |||||||||||||| |||| |     
T  15983 ctacccaaaggttcaactcataacaacttgtgcgacaaagatcgcaaaatcctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctata 15884  T
Q  149 ctcgccgtggcgagttca 166  Q
    |||||  |||||||||||    
T  15883 ctcgctatggcgagttca 15866  T

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Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 5852 - 5802
Alignment:
Q  194 ggttcaatctcatcctacattctttcctaatcattattagacatgttcagg 244  Q
    ||||||||||||  ||||| | ||||||||||||||||| |||||||||||    
T  5852 ggttcaatctcaatctacaatttttcctaatcattattatacatgttcagg 5802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 15566 - 15509
Alignment:
Q  188 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    ||||||||||||||||||  ||| | |||||||||||||| |||| ||||||| ||||    
T  15566 attccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggc 15509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 17475 - 17423
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  17475 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 17423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 4033 - 3993
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  4033 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 62556 - 62592
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  62556 actcgcgaggcgagagcatctgctcgccatggcgagt 62592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  128 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 168  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 192793 - 192757
Alignment:
Q  127 actcgcgaggcgagagcctctgctcgccgtggcgagt 163  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  192793 actcgcgaggcgagagcatctgctcgccatggcgagt 192757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 58161 - 58109
Alignment:
Q  193 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggc 245  Q
    |||||||||||  |||||||||| ||||||||||||| |||  ||||||||||    
T  58161 aggttcaatcttgtcctacattcattcctaatcattactaggtatgttcaggc 58109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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