View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15763_high_2 (Length: 248)
Name: NF15763_high_2
Description: NF15763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15763_high_2 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 6316753 - 6316524
Alignment:
| Q |
19 |
accgatacgtgtctggggttaatatggtttcaatatgatgcagactgaggttatgatatagttttcggcagtgaatatggttatttttctctatttgcat |
118 |
Q |
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| T |
6316753 |
accgatacgtgtctggggttaatatggtttcaatatgatgcagactgaggttatgatatagttttcggcagtgaatatggttatttttctctatttgcat |
6316654 |
T |
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| Q |
119 |
tgatctttagtttcctatttataaagtctgatatgatatctctgtttgatttggtgggtgatgattgatagatatatccatactcttactctttgaatct |
218 |
Q |
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| T |
6316653 |
tgatctttagtttcctatttataaagtctgatatgatatctctgcttgatttggtgggtgatgattgatagatatatccatactcttactctttgaatct |
6316554 |
T |
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| Q |
219 |
ttagtttccagcagagatctgaatgtagat |
248 |
Q |
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| T |
6316553 |
ttagtttccagcagagatctgaatgtagat |
6316524 |
T |
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