View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15763_low_7 (Length: 287)
Name: NF15763_low_7
Description: NF15763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15763_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 41547032 - 41547304
Alignment:
| Q |
1 |
aggtgtgcttaaagtatacatacaatatcaatatagtgtaaagaaattatagggaccacttactaatttaaccttggagtatatatgatttcatcaatga |
100 |
Q |
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| T |
41547032 |
aggtgtgcttaaagtatacatacaatatcaatatagtgtaaagaaattatagggaccacttactaatttaaccttggagtatatatgatttcatcaatga |
41547131 |
T |
|
| Q |
101 |
ggtcttgttccattactagtagcctcacaagttcaaagaaattataaaatactgcctactacatgcttcaataaaacaggaaaatcacgttccaggccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41547132 |
ggtcttgttccattactagtagcctcacaagttcaaagaaattataaaatactgcctactacatgcttcaataaaacaggaaaatcacgttccaggccaa |
41547231 |
T |
|
| Q |
201 |
gctacctacctagcaatctaaccaaacatttatttgatcacacatattgaactcaattccatacctgatgatg |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41547232 |
gctacctacctagcaatctaaccaaacatttatttgatcacacatattgaactcaattccatacctgatgatg |
41547304 |
T |
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