View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15764_low_14 (Length: 334)
Name: NF15764_low_14
Description: NF15764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15764_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 13 - 317
Target Start/End: Original strand, 32022119 - 32022423
Alignment:
| Q |
13 |
acctgtgtcaagaaccatgtagtagggttttggtggttggcctatgcctagtctggagaaatactcaccggagccggagccagaaccggaggaaactggt |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32022119 |
acctgtgtcaagaaccatgtagtagggttttggtggttgacctatgcctagtctggagaaatactcaccggagccggagccagaaccggaggaaactggt |
32022218 |
T |
|
| Q |
113 |
gtggagagatcttcttgttgaagctcggtttgaaccgggtggagatcggttttcttgaggttgtttagagaaagtttgagttttgtagttagtgagtcaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32022219 |
gtggagagatcttcttgttgaagctcggtttgaaccgggtggagatcggttttcttgaggttgtttagagaaagttcgagttttgtagttagtgagtcaa |
32022318 |
T |
|
| Q |
213 |
ctcgggctgagtcacgagtgagtctagcttgcataagttttgtatagtctttatggttttcattgagaagattctctcttggatgtatgagaattgagaa |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32022319 |
ctcgggctgagtcacgagtgagtctagcttgcataagttttgtatagtctttatggttttcattgagaagattctctcttggatgtatgagaattgagaa |
32022418 |
T |
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| Q |
313 |
agatg |
317 |
Q |
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||||| |
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| T |
32022419 |
agatg |
32022423 |
T |
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