View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15766_low_16 (Length: 285)
Name: NF15766_low_16
Description: NF15766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15766_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 106 - 263
Target Start/End: Original strand, 31844406 - 31844566
Alignment:
| Q |
106 |
taaattagggttagtagtagtgatagtagggttattaaggttaagattaagcatagaagaaccttgaat---ttgagctggttcatgagttgttggtggt |
202 |
Q |
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| T |
31844406 |
taaattagggttagtagtagtgatagtagggttattaaggttaagattaagcatagaagaaccttcattaagttgagctggttcatgagttgttggtggt |
31844505 |
T |
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| Q |
203 |
gatgattgtctaagccttgctctatcccttctatgaacattcatgtgacctccaagtgctt |
263 |
Q |
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| T |
31844506 |
gatgattgtctaagccttgctctatcccttctatgaacattcatgtgacctccaagtgctt |
31844566 |
T |
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