View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15767_high_12 (Length: 249)
Name: NF15767_high_12
Description: NF15767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15767_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 40616972 - 40617212
Alignment:
| Q |
1 |
cctacaagccaaggtgaatgaatactctcttcaatcttatttctaaatgagcatgaatctcactctctcaaaagctagctaacactttgtttggttgtga |
100 |
Q |
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| T |
40616972 |
cctacaagccaaggtgaatgaatactctcttcaatcttatttctaaatgagcatgaatctcactctctcaaaagctagctaacactttgtttggttgcga |
40617071 |
T |
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| Q |
101 |
aaataaa--gtgaggaattatattgaaaggaaagctaactcataagatgatggtacccaagcgcttacttatacgacatcctgagaaccttgacaatttg |
198 |
Q |
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||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |
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| T |
40617072 |
aaataaattgagaggaattatagtgaaaggaaagctaactcataagatgatggtacttgagcgcttacttatacgacatcctaagaatcttgacaatttg |
40617171 |
T |
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| Q |
199 |
agactccaatacctagcttcatgcccaatgtggatcctatg |
239 |
Q |
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||||||||||||||||||||||||||||||||| ||||||| |
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| T |
40617172 |
agactccaatacctagcttcatgcccaatgtgggtcctatg |
40617212 |
T |
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