View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15768_low_17 (Length: 294)
Name: NF15768_low_17
Description: NF15768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15768_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 35505726 - 35505458
Alignment:
| Q |
18 |
gatgaaaacgatccaccacctccagtggcacttgagcaacttgatgtcatcgtagcagttgccacggtgacaggagacagctgccttaaccgtttcgttc |
117 |
Q |
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| T |
35505726 |
gatgaaaacgatccaccacctccagtggcacttgagcagcttgatgtcatcgtagcagttgccacggtgacaggagacaattgccttaaccgtttcgttc |
35505627 |
T |
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| Q |
118 |
gctttcctttgatgagatgcccggcatcattaccatgttcttcacttcttattattccttccatgtccattttagacaacatcttaagaaaaaagaaata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35505626 |
gctttcctttgatgagatgcccggcatcattaccatgttcttcacttcctattattccttccatgtccattttagacaacatcttaagaaaaaagaaata |
35505527 |
T |
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| Q |
218 |
tagggttttgaatttgatttaacaatatgaatatgaaaggtataaggtaaggtaagagtagagaataat |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35505526 |
tagggttttgaatttgatttaacaatatgaatatgaaaggtataaggtaaggtaagagtagagaataat |
35505458 |
T |
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