View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15768_low_18 (Length: 285)
Name: NF15768_low_18
Description: NF15768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15768_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 2 - 268
Target Start/End: Complemental strand, 34387024 - 34386764
Alignment:
| Q |
2 |
cacaacacatgatttatccatagtcatgatacataaataagtttgcaatgataattcaaaaaatcaaacataatacattccaatacaagtacgtagatac |
101 |
Q |
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| T |
34387024 |
cacaacacaagatttatccatagtcatgatacataaacaagtttgcaatgataattcaaaaaatcaaacatattacattccaatac------gtagatac |
34386931 |
T |
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| Q |
102 |
ataagtttgtcagaataatgaaatgatttatttacaaacttaatcattataatgttccattaaccacaaaagtaaagactcagagccaccattataatcc |
201 |
Q |
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| T |
34386930 |
ataagtttgtcagaataatgaaatgatttatttacaaacttaatcattataatgttccattaaccacaaaagtaaagactcagagccaccattataatcc |
34386831 |
T |
|
| Q |
202 |
aaattgggtaggcatctgtttgattttacaactcatagtccaaaatgactgcaggtgtattattcct |
268 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34386830 |
aaattggttaggcatctgtttgattttacaactcatagtccaaaatgactgcaggtgtattattcct |
34386764 |
T |
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