View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15768_low_27 (Length: 237)
Name: NF15768_low_27
Description: NF15768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15768_low_27 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 225
Target Start/End: Original strand, 6720994 - 6721202
Alignment:
| Q |
17 |
gagttacaatcaaagcatgcatgtagctaaaagcaacaatctgagattgaacatcaacatattgnnnnnnntcatcaagtaatgannnnnnnnactcttt |
116 |
Q |
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| T |
6720994 |
gagttacaatcaaagcatgcatgtagctaaaagcaacaatctgagattgaacatcaacatattgaaaaaaatcatcaagtaatgattttttttactcttt |
6721093 |
T |
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| Q |
117 |
aaaataggaaagattgaataaaattggcaatattcaagttcataataaatacctcatttaacaaacaaaaatattaccaaaaccaaaaggtgagttgcaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6721094 |
aaaataggaaagattgaataaaattggcaatattcaagttcataataaatacctcatttaacaaacaaaaatattaccaaaaccaaaaggtgagttgcaa |
6721193 |
T |
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| Q |
217 |
agatgatgt |
225 |
Q |
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|||| |||| |
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| T |
6721194 |
agatcatgt |
6721202 |
T |
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