View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15770_high_6 (Length: 347)
Name: NF15770_high_6
Description: NF15770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15770_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 2 - 329
Target Start/End: Complemental strand, 44851789 - 44851472
Alignment:
| Q |
2 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacatnnnnnnnnnncacttgaatcaatcaagaaggggcaaca |
101 |
Q |
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| T |
44851789 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacataaaaaa----------aatcaatcaagaaggggcaaca |
44851700 |
T |
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| Q |
102 |
ggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgatt |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851699 |
ggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgatt |
44851600 |
T |
|
| Q |
202 |
tagatgctgacatattctttaaccgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttgaa |
301 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851599 |
tagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttgaa |
44851500 |
T |
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| Q |
302 |
aggatcttcttggtctatgatgatgtcc |
329 |
Q |
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|||||||||||||||||| ||||||||| |
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| T |
44851499 |
aggatcttcttggtctataatgatgtcc |
44851472 |
T |
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