View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15771_low_7 (Length: 266)

Name: NF15771_low_7
Description: NF15771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15771_low_7
NF15771_low_7
[»] chr6 (63 HSPs)
chr6 (11-248)||(25579744-25579981)
chr6 (11-248)||(26142890-26143127)
chr6 (7-248)||(26055947-26056188)
chr6 (7-248)||(26075917-26076158)
chr6 (11-248)||(25538565-25538802)
chr6 (15-226)||(26048874-26049085)
chr6 (15-226)||(26070043-26070254)
chr6 (11-248)||(25481767-25482004)
chr6 (11-243)||(26656014-26656246)
chr6 (11-243)||(26761985-26762217)
chr6 (11-243)||(27337995-27338227)
chr6 (11-243)||(27398735-27398967)
chr6 (11-248)||(26646504-26646741)
chr6 (11-248)||(26752472-26752709)
chr6 (11-203)||(26623001-26623193)
chr6 (11-203)||(26728979-26729171)
chr6 (11-174)||(27678971-27679134)
chr6 (11-132)||(26884188-26884311)
chr6 (31-174)||(27427605-27427748)
chr6 (11-174)||(27677613-27677776)
chr6 (11-132)||(27706443-27706564)
chr6 (25-233)||(26823879-26824087)
chr6 (11-206)||(27718346-27718541)
chr6 (11-132)||(27698535-27698656)
chr6 (11-206)||(27610969-27611164)
chr6 (11-206)||(27724812-27725007)
chr6 (11-132)||(27593061-27593182)
chr6 (11-101)||(27229257-27229347)
chr6 (11-204)||(28242829-28243022)
chr6 (25-137)||(27531233-27531345)
chr6 (16-243)||(28098299-28098526)
chr6 (7-126)||(28181135-28181254)
chr6 (20-143)||(28149971-28150094)
chr6 (7-126)||(28185387-28185506)
chr6 (11-118)||(31284313-31284420)
chr6 (12-206)||(26341898-26342095)
chr6 (25-188)||(28139580-28139743)
chr6 (7-126)||(28226971-28227090)
chr6 (14-176)||(27604702-27604864)
chr6 (11-131)||(28781164-28781284)
chr6 (11-188)||(28234589-28234765)
chr6 (11-126)||(28297760-28297875)
chr6 (11-126)||(28514198-28514313)
chr6 (11-132)||(26802467-26802588)
chr6 (12-120)||(26861642-26861750)
chr6 (13-121)||(28325508-28325616)
chr6 (11-131)||(28786303-28786423)
chr6 (11-131)||(28792424-28792544)
chr6 (70-239)||(26949745-26949914)
chr6 (67-243)||(26848741-26848917)
chr6 (66-131)||(26937174-26937239)
chr6 (67-115)||(2184369-2184417)
chr6 (68-116)||(26975134-26975182)
chr6 (68-135)||(25071741-25071808)
chr6 (68-132)||(2184980-2185044)
chr6 (67-126)||(27214498-27214557)
chr6 (67-126)||(27234671-27234730)
chr6 (67-121)||(27665169-27665223)
chr6 (25-104)||(25506978-25507057)
chr6 (70-121)||(26635774-26635825)
chr6 (70-121)||(26741740-26741791)
chr6 (70-116)||(26959250-26959296)
chr6 (152-204)||(29826193-29826245)
[»] chr1 (3 HSPs)
chr1 (11-241)||(268276-268506)
chr1 (13-248)||(28127591-28127826)
chr1 (20-248)||(28164275-28164502)
[»] chr8 (1 HSPs)
chr8 (9-241)||(29273702-29273934)
[»] chr4 (8 HSPs)
chr4 (11-248)||(18731416-18731653)
chr4 (11-221)||(18655416-18655626)
chr4 (11-212)||(18679515-18679716)
chr4 (11-248)||(18699312-18699549)
chr4 (31-174)||(18073807-18073950)
chr4 (11-221)||(18724024-18724234)
chr4 (31-125)||(17989088-17989182)
chr4 (68-206)||(5090921-5091059)
[»] scaffold0003 (1 HSPs)
scaffold0003 (31-174)||(59615-59758)
[»] scaffold0349 (2 HSPs)
scaffold0349 (11-132)||(3462-3584)
scaffold0349 (11-206)||(14323-14517)
[»] scaffold0038 (4 HSPs)
scaffold0038 (11-204)||(42991-43184)
scaffold0038 (7-126)||(27469-27588)
scaffold0038 (11-126)||(34750-34865)
scaffold0038 (13-121)||(116823-116931)
[»] scaffold0277 (2 HSPs)
scaffold0277 (21-206)||(4638-4823)
scaffold0277 (11-131)||(13674-13794)
[»] scaffold0019 (1 HSPs)
scaffold0019 (11-121)||(58334-58444)
[»] chr2 (3 HSPs)
chr2 (12-121)||(3279714-3279823)
chr2 (68-121)||(17993736-17993789)
chr2 (152-203)||(3279857-3279908)
[»] scaffold0419 (1 HSPs)
scaffold0419 (11-129)||(7550-7668)
[»] scaffold1254 (1 HSPs)
scaffold1254 (11-53)||(37-79)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 25579744 - 25579981
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25579744 catcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 25579843  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25579844 cattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagtat 25579943  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    |||| |||||||||||||||||||||||||||||||||    
T  25579944 cttactaagcatgaagagaggtttcaaaataacgagaa 25579981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 26142890 - 26143127
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26142890 catcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 26142989  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  26142990 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcagagtgggatttatggtgagcat 26143089  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    |||| |||||||||||||||||||||||||||||||||    
T  26143090 cttactaagcatgaagagaggtttcaaaataacgagaa 26143127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 26055947 - 26056188
Alignment:
Q  7 acatcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26055947 acatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 26056046  T
Q  107 acatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26056047 acatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 26056146  T
Q  207 gcatcttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    |||||||| ||||||| ||||| |||| ||||||||||||||    
T  26056147 gcatcttactaagcataaagaggggttccaaaataacgagaa 26056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 26075917 - 26076158
Alignment:
Q  7 acatcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26075917 acatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 26076016  T
Q  107 acatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26076017 acatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 26076116  T
Q  207 gcatcttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    |||||||| ||||||| ||||| |||| ||||||||||||||    
T  26076117 gcatcttactaagcataaagaggggttccaaaataacgagaa 26076158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 25538565 - 25538802
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25538565 catcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccagat 25538664  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  25538665 cattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcagttacgacatcagagtgggagttatggtgagcat 25538764  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
     ||| ||||||||||||||||||||||||||| |||||    
T  25538765 tttactaagcatgaagagaggtttcaaaataatgagaa 25538802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 26048874 - 26049085
Alignment:
Q  15 acttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26048874 acttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26048973  T
Q  115 cactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatctta 214  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  26048974 cactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagcatctta 26049073  T
Q  215 gtaagcatgaag 226  Q
     |||||||||||    
T  26049074 ctaagcatgaag 26049085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 26070043 - 26070254
Alignment:
Q  15 acttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26070043 acttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26070142  T
Q  115 cactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatctta 214  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  26070143 cactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagcatctta 26070242  T
Q  215 gtaagcatgaag 226  Q
     |||||||||||    
T  26070243 ctaagcatgaag 26070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 25481767 - 25482004
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25481767 catcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 25481866  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |  | |||| ||| |   | |||||||||||  ||    
T  25481867 cattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatcctactgatgttcgacgtcatacatgtagttatggtgaatat 25481966  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    || | ||||||||||||| |||| ||||||||||||||    
T  25481967 ctgactaagcatgaagaggggttccaaaataacgagaa 25482004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 26656014 - 26656246
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26656014 catcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 26656113  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||| ||||| ||||||||| |||| |  || || || |||||||||| |||||| |||||||||||||||||||||| ||| ||||| |||||||||    
T  26656114 cattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagcat 26656213  T
Q  211 cttagtaagcatgaagagaggtttcaaaataac 243  Q
    |||| |||||||||| ||| ||| |||||||||    
T  26656214 cttactaagcatgaaaagaagttccaaaataac 26656246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 26761985 - 26762217
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26761985 catcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 26762084  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||| ||||| ||||||||| |||| |  || || || |||||||||| |||||| |||||||||||||||||||||| ||| ||||| |||||||||    
T  26762085 cattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagcat 26762184  T
Q  211 cttagtaagcatgaagagaggtttcaaaataac 243  Q
    |||| |||||||||| ||| ||| |||||||||    
T  26762185 cttactaagcatgaaaagaagttccaaaataac 26762217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 27338227 - 27337995
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  27338227 catcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacat 27338128  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||| | |||| |  || || || |||||||||| || ||| ||||||||| |||||||||||| |||||||||||||||||||    
T  27338127 cattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagcat 27338028  T
Q  211 cttagtaagcatgaagagaggtttcaaaataac 243  Q
    |||| |||||||||||| | ||| |||||||||    
T  27338027 cttactaagcatgaagataagttccaaaataac 27337995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 27398967 - 27398735
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  27398967 catcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacat 27398868  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||| | |||| |  || || || |||||||||| || ||| ||||||||| |||||||||||| |||||||||||||||||||    
T  27398867 cattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagcat 27398768  T
Q  211 cttagtaagcatgaagagaggtttcaaaataac 243  Q
    |||| |||||||||||| | ||| |||||||||    
T  27398767 cttactaagcatgaagataagttccaaaataac 27398735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 26646504 - 26646741
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| |||||||||||||||||||||||  | ||||||  ||||||||| ||||||  |||||||||||||||||||||||||||    
T  26646504 catcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacat 26646603  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||| ||||||||||||||| || |  | || || |||||||||||||  ||||| |||||||| ||||| ||||| ||||||||||||||||| |||    
T  26646604 cattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacat 26646703  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    || | |||||| |||||||| || ||||||||| ||||    
T  26646704 ctcactaagcacgaagagagtttccaaaataacaagaa 26646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 26752472 - 26752709
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| |||||||||||||||||||||||  | ||||||  ||||||||| ||||||  |||||||||||||||||||||||||||    
T  26752472 catcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacat 26752571  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||| ||||||||||||||| || |  | || || |||||||||||||  ||||| |||||||| ||||| ||||| ||||||||||||||||| |||    
T  26752572 cattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacat 26752671  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    || | |||||| |||||||| || ||||||||| ||||    
T  26752672 ctcactaagcacgaagagagtttccaaaataacaagaa 26752709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 26623001 - 26623193
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||| ||| || |||||||| |||||||||||||||||  | |||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  26623001 catcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacat 26623100  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatgg 203  Q
    ||||||||||||||| |||||| || |  | || || ||||| |||||||  ||||| |||||||||||||| ||||| | ||||||||||||    
T  26623101 cattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg 26623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 26728979 - 26729171
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||||| ||| || |||||||| |||||||||||||||||  | |||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  26728979 catcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacat 26729078  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatgg 203  Q
    ||||||||||||||| |||||| || |  | || || ||||| |||||||  ||||| |||||||||||||| ||||| | ||||||||||||    
T  26729079 cattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg 26729171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 27678971 - 27679134
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  27678971 catcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacat 27679070  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctact 174  Q
    |||||||||||||||||||||| || || | ||  | || ||||||| || |||||||||||||    
T  27679071 cattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttggtgtggaacctact 27679134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 26884188 - 26884311
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccaca- 109  Q
    |||||||  |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  26884188 catcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacat 26884287  T
Q  110 -tcattcactgctacaagacaaag 132  Q
     |||||||||||||| ||||||||    
T  26884288 gtcattcactgctacgagacaaag 26884311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 27427748 - 27427605
Alignment:
Q  31 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaa 130  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |    
T  27427748 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaacca 27427649  T
Q  131 agagttgcttagtatttcccgttttctatgatgtggaacctact 174  Q
    || ||||| | || || || ||||||| || |||||||||||||    
T  27427648 agggttgcctcgttttgcctgttttctttggtgtggaacctact 27427605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 27677776 - 27677613
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| ||||||||||||||| |  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  27677776 catcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacat 27677677  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctact 174  Q
    |||||||||||||||||||||| || || | ||  | || ||||||| || |||||||||||||    
T  27677676 cattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttgctgtggaacctact 27677613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 27706564 - 27706443
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| |||||||||||||||||  | ||||||  || |||||| |||||||||||||||||||||||||||||||||||    
T  27706564 catcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacat 27706465  T
Q  111 cattcactgctacaagacaaag 132  Q
    ||||||||||||||||||||||    
T  27706464 cattcactgctacaagacaaag 27706443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 26823879 - 26824087
Alignment:
Q  25 gccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 124  Q
    ||||| ||||| |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctaca 26823978  T
Q  125 agacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttagtaagcatga 224  Q
    ||  |||| |  || | || || || |||||||||| |||||| |||  | |||||||||||||| |||||||||||| |   ||||| | |||||||||    
T  26823979 aggaaaaggggcgcctcgttttgcctgttttctatggtgtggatcctggtgacatacgacatcagcgtgggagttatgctatacatctcactaagcatga 26824078  T
Q  225 agagaggtt 233  Q
    | |||||||    
T  26824079 aaagaggtt 26824087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 27718541 - 27718346
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||    
T  27718541 catcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacat 27718442  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
     ||||||||||||||||||||| || || | || || || |||||||  |  |||||||||||| || | ||||||||||  || |||||||||||    
T  27718441 aattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtga 27718346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 27698656 - 27698535
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| || ||||||||||||||||||||  | ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  27698656 catcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacat 27698557  T
Q  111 cattcactgctacaagacaaag 132  Q
     |||||||||||| ||||||||    
T  27698556 aattcactgctacgagacaaag 27698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 27611164 - 27610969
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||    
T  27611164 catcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacat 27611065  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
     ||||||||||||||||||||| || || | || || || |||||||  |  |||||||||||| |  | ||||||||||  || |||||||||||    
T  27611064 aattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaaagtgcgacatcagaaaggtagttatggtga 27610969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 27725007 - 27724812
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| | |||||| ||||||||||||||||||||||||||    
T  27725007 catcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacat 27724908  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
     ||||||||||||||||||||| || || | || || || |||||||  |  |||||||||||| || | ||||||||||  || |||||||||||    
T  27724907 aattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtga 27724812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 27593182 - 27593061
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||| ||||||    
T  27593182 catcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacat 27593083  T
Q  111 cattcactgctacaagacaaag 132  Q
    |||||| |||||||||||||||    
T  27593082 cattcattgctacaagacaaag 27593061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 27229257 - 27229347
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 101  Q
    ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27229257 catcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 28242829 - 28243022
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| ||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||    
T  28242829 catcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28242928  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggt 204  Q
    ||||||||||| ||||| |||  |  || |||| || ||  |||||||||||||||||||| || || |  ||||||||| ||| |||||||||    
T  28242929 cattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgagacatcagattggcagttatggt 28243022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 27531345 - 27531233
Alignment:
Q  25 gccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 124  Q
    ||||| ||| |||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||     
T  27531345 gccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacg 27531246  T
Q  125 agacaaagagttg 137  Q
    | |||||| ||||    
T  27531245 atacaaagggttg 27531233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 28098526 - 28098299
Alignment:
Q  16 cttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 115  Q
    |||||||||||||||||||| || |||||||| |||||  | || |||   |||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  28098526 cttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtccacatcattc 28098427  T
Q  116 actgctac-aagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga-gcatctt 213  Q
    || | ||| |||| |||| ||||||| || |||||  |||| | ||| ||||||||| ||||| | ||||||||||  |||||||||||||| ||||  |    
T  28098426 accgttacgaaga-aaagggttgcttcgtttttcctattttttgtgacgtggaaccttctcacgtgcgacatcagacggggagttatggtgaagcat--t 28098330  T
Q  214 ag-taagcatgaagagaggtttcaaaataac 243  Q
    || |||||||||||||||||| |||||||||    
T  28098329 agctaagcatgaagagaggttccaaaataac 28098299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 28181135 - 28181254
Alignment:
Q  7 acatcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 106  Q
    |||||||||||| |||||||||| ||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||||||||||||||    
T  28181135 acatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28181234  T
Q  107 acatcattcactgctacaag 126  Q
    ||||||||||||||| ||||    
T  28181235 acatcattcactgcttcaag 28181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 28149971 - 28150094
Alignment:
Q  20 tcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 119  Q
    |||||||||| ||||| || |||||||| ||||| || || |||  ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||    
T  28149971 tcaaggccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactg 28150070  T
Q  120 ctacaagacaaagagttgcttagt 143  Q
    || |||| ||||| ||||||||||    
T  28150071 cttcaaggcaaagggttgcttagt 28150094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 28185387 - 28185506
Alignment:
Q  7 acatcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 106  Q
    |||||||||||| |||||||||| ||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||||||||||||||    
T  28185387 acatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28185486  T
Q  107 acatcattcactgctacaag 126  Q
    |||||||| |||||| ||||    
T  28185487 acatcattaactgcttcaag 28185506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 31284313 - 31284420
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| ||||| ||||| |||||||||||||| ||| | ||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  31284313 catcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacat 31284412  T
Q  111 cattcact 118  Q
    ||||||||    
T  31284413 cattcact 31284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 26342095 - 26341898
Alignment:
Q  12 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 111  Q
    |||||||||||| ||||| ||||| || |||||||| ||||| || || ||   ||||||||| |||||||| |||||||||||||||||||||||||||    
T  26342095 atcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatc 26341996  T
Q  112 attcactgctacaagacaaaga---gttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
    ||||| |||| |||| ||||||   || ||  | | || || |||||||||||  |||||||| ||||  |||||| ||||| ||||||||| |||||    
T  26341995 attcattgcttcaaggcaaagaagggtcgcaaaattttgcctgttttctatgacatggaaccttctcatgtacgacgtcagattgggagttacggtga 26341898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 28139580 - 28139743
Alignment:
Q  25 gccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 124  Q
    ||||| ||||||||||||||||| || ||  | |||||   ||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||| ||    
T  28139580 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttca 28139679  T
Q  125 agacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatca 188  Q
    | |||||| | || || || || || |||||||||| |||||| ||| ||||||| ||||||||    
T  28139680 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 28139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 28226971 - 28227090
Alignment:
Q  7 acatcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 106  Q
    |||||||||||| |||||| ||| ||||||||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||    
T  28226971 acatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28227070  T
Q  107 acatcattcactgctacaag 126  Q
    |||||||||| |||| ||||    
T  28227071 acatcattcattgcttcaag 28227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 27604864 - 27604702
Alignment:
Q  14 cacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcat 113  Q
    ||||| |||||||||| || ||||| ||||||||||||||  | ||||||  ||| ||||| |||||||| ||||||||||| |||||||| ||||||||    
T  27604864 cacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcat 27604765  T
Q  114 tcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactca 176  Q
    ||| ||||||| ||||||| || || | || || || ||||||| || |||||||||| ||||    
T  27604764 tcattgctacacgacaaagggtcgcgtcgttttgcctgttttctttggtgtggaaccttctca 27604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 28781164 - 28781284
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  ||||||||||||||||||||||||||||||||||  | ||||||  |||||||||  ||||   |||||| |||||||||||||| |||||    
T  28781164 catcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacat 28781263  T
Q  111 cattcactgctacaagacaaa 131  Q
     ||||| ||||||||||||||    
T  28781264 tattcattgctacaagacaaa 28781284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 28234589 - 28234765
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| ||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||    
T  28234589 catcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28234688  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatca 188  Q
    |||| | |||| | ||  ||| ||  || |||| || ||  |||||||||||||||||||| ||||| | ||||||||    
T  28234689 cattta-tgcttcgaggaaaatagacgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 28234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 28297875 - 28297760
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||  ||| |||||  |||||||||| |||||  | || ||| |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  28297875 catcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacat 28297776  T
Q  111 cattcactgctacaag 126  Q
    ||||||||||| ||||    
T  28297775 cattcactgcttcaag 28297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 28514198 - 28514313
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||  ||| |||||  |||||||||| |||||  | || ||| |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  28514198 catcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacat 28514297  T
Q  111 cattcactgctacaag 126  Q
    ||||||||||| ||||    
T  28514298 cattcactgcttcaag 28514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 26802467 - 26802588
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| |||||    
T  26802467 catcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 26802566  T
Q  111 cattcactgctacaagacaaag 132  Q
     ||||| ||||| |||||||||    
T  26802567 tattcattgctataagacaaag 26802588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 26861642 - 26861750
Alignment:
Q  12 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 111  Q
    |||||| | ||| ||||| ||||| ||||| ||||| |||||  | ||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||    
T  26861642 atcactcgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatc 26861741  T
Q  112 attcactgc 120  Q
    ||| |||||    
T  26861742 attaactgc 26861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 28325508 - 28325616
Alignment:
Q  13 tcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatca 112  Q
    |||||| |||||||||| ||||| ||||||||||| ||||| || || |||  ||| ||||| |||||||| ||||| ||||| |||||||||||||| |    
T  28325508 tcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacatta 28325607  T
Q  113 ttcactgct 121  Q
    |||||||||    
T  28325608 ttcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 28786303 - 28786423
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  | ||   |||||| |||||||||||||| |||||    
T  28786303 catcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacat 28786402  T
Q  111 cattcactgctacaagacaaa 131  Q
     ||||| ||||||||||||||    
T  28786403 tattcattgctacaagacaaa 28786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 28792424 - 28792544
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  | ||   |||||| |||||||||||||| |||||    
T  28792424 catcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacat 28792523  T
Q  111 cattcactgctacaagacaaa 131  Q
     ||||| ||||||||||||||    
T  28792524 tattcattgctacaagacaaa 28792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 26949745 - 26949914
Alignment:
Q  70 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaac 169  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||| || ||||  |||  || || | ||  | || |||||||||||||| ||||    
T  26949745 tatgcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaac 26949844  T
Q  170 ctactcacatacgacatcagagtgggagttatggtg-agcatcttagtaagcatgaagagaggtttcaaaa 239  Q
    || ||||| | |||||||||| |   |||||||||| |||| |||  |||||||||||||||||| |||||    
T  26949845 cttctcacgtgcgacatcagaattatagttatggtgaagca-cttgctaagcatgaagagaggttccaaaa 26949914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 26848741 - 26848917
Alignment:
Q  67 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtgg 166  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||| |||| ||||  |||| || || | ||  |||| ||||||||||   | |    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggtagcatggttattcctgttttctatggcatag 26848840  T
Q  167 aacctactcacatacgacatcagagtgggagttatggtg-agcatcttagtaagcatgaagagaggtttcaaaataac 243  Q
    ||||| ||||  | |||||||||| | | |||||||||| |||| |||  |||||||||||||  |||||||||||||    
T  26848841 aaccttctcatgtgcgacatcagaatagtagttatggtgaagca-cttgctaagcatgaagaggtgtttcaaaataac 26848917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 26937174 - 26937239
Alignment:
Q  66 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaa 131  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  26937174 caactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaa 26937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 2184369 - 2184417
Alignment:
Q  67 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2184369 aactatgcttcttcttcattttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 26975134 - 26975182
Alignment:
Q  68 actatgcatcttcttcattttgtttggacgaacttgtccacatcattca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcattca 26975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 25071741 - 25071808
Alignment:
Q  68 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagt 135  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||  |||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagt 25071808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 2184980 - 2185044
Alignment:
Q  68 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 132  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||  |||| |||| |||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag 2185044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 27214498 - 27214557
Alignment:
Q  67 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 126  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||| |||| ||||    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaag 27214557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 27234730 - 27234671
Alignment:
Q  67 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 126  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||| |||| ||||    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaag 27234671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 27665223 - 27665169
Alignment:
Q  67 aactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 121  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||| ||||    
T  27665223 aactatgctacttcttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 25507057 - 25506978
Alignment:
Q  25 gccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgt 104  Q
    ||||| |||||||||||||||||||||||  |  |||||  ||||||||| |||||   |||||||||||| ||||||||    
T  25507057 gccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttgtttggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 26635774 - 26635825
Alignment:
Q  70 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 121  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||| ||||    
T  26635774 tatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgct 26635825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 26741740 - 26741791
Alignment:
Q  70 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 121  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||| ||||    
T  26741740 tatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgct 26741791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 26959250 - 26959296
Alignment:
Q  70 tatgcatcttcttcattttgtttggacgaacttgtccacatcattca 116  Q
    ||||| |||||||| |||| |||||| ||||||||||||||||||||    
T  26959250 tatgcttcttcttcgttttatttggatgaacttgtccacatcattca 26959296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 29826193 - 29826245
Alignment:
Q  152 ttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggt 204  Q
    |||||||||||||||| ||| ||||  | |||||||||| |||||||||||||    
T  29826193 ttttctatgatgtggatccttctcatgtgcgacatcagactgggagttatggt 29826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 268506 - 268276
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| ||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  268506 catcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacat 268407  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    ||||||||||||||||| |||| || |  |  | || ||||| |||||||  ||||| |||||||||||||||||||| ||||||||||||||||| |||    
T  268406 cattcactgctacaagaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacat 268307  T
Q  211 cttagtaagcatgaagagaggtttcaaaata 241  Q
    || | |||||| |||||||| || |||||||    
T  268306 ctcactaagcacgaagagagtttccaaaata 268276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 248
Target Start/End: Complemental strand, 28127826 - 28127591
Alignment:
Q  13 tcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatca 112  Q
    |||||| | |||||||| ||||||||||| |||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  28127826 tcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatca 28127727  T
Q  113 ttcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatct 212  Q
    |||||||||||||||||||| || || |||| || || ||||||| ||  ||||| |||||| |  | ||| |||| |  ||||||||||||||  | ||    
T  28127726 ttcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcatacagggagttatggtgaagagct 28127627  T
Q  213 tagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    |  |||||||| ||||||||| ||||||||| ||||    
T  28127626 tgctaagcatggagagaggttccaaaataacaagaa 28127591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 28164502 - 28164275
Alignment:
Q  20 tcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 119  Q
    |||||||||| ||| ||||| | |||||||||||  | || |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28164502 tcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 28164403  T
Q  120 ctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttagtaag 219  Q
    ||||||||||||| || || |||| || || ||||||| ||  ||||| |||||| |  | |||||||| |  |||||||||||  |  |||||| ||||    
T  28164402 ctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatcctactgatgtgcgacatcatacagggagttatggcaaagatcttactaag 28164304  T
Q  220 catgaagagaggtttcaaaataacgagaa 248  Q
    ||||  |||||||| ||||||||| ||||    
T  28164303 catggtgagaggttccaaaataacaagaa 28164275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 241
Target Start/End: Complemental strand, 29273934 - 29273702
Alignment:
Q  9 atcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccac 108  Q
    ||||||||| | ||| | ||| ||||| ||||| |||||||||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  29273934 atcatcactcgacaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccac 29273835  T
Q  109 atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc 208  Q
    |||||||||||||||||||||||| || |  |  | || || || |||||||  ||||| |||||||||||||||||||| ||||||||||||||||| |    
T  29273834 atcattcactgctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaac 29273735  T
Q  209 atcttagtaagcatgaagagaggtttcaaaata 241  Q
    |||| | |||| | |||||||| || |||||||    
T  29273734 atctcactaagtacgaagagagtttccaaaata 29273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 18731653 - 18731416
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| ||||| ||||| |||||||| || |||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  18731653 catcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacat 18731554  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    ||| |||||||||||||||||| || |  | || || || ||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||| |||    
T  18731553 catgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacat 18731454  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    || | ||||||  || |||| || ||||||||| ||||    
T  18731453 ctcactaagcacaaaaagagtttccaaaataacaagaa 18731416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 18655626 - 18655416
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| |||||  |||| |||||||| ||||||||  | ||||||  ||||||||| ||||||||||||||||||||||||||||||| |||    
T  18655626 catcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcat 18655527  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||||| || |  | || ||||| ||||||||||  ||||| |||||||||||||||||||| | ||| ||||||||||| |||    
T  18655526 cattcactgctacaagacaaagggtcgtctcgtttttcctgttttctatggcgtggatcctactcacatacgacatcaaactggaagttatggtgaacat 18655427  T
Q  211 cttagtaagca 221  Q
    || | ||||||    
T  18655426 ctcactaagca 18655416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 212
Target Start/End: Complemental strand, 18679716 - 18679515
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| ||||| ||||| |||||||| || |||||  | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  18679716 catcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacat 18679617  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||||| || |  | || || || ||||||||||  ||||| |||||||||||| ||||||| ||||| ||||||||||| |||    
T  18679616 cattcactgctacaagacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcacatatgacatcaaagtggtagttatggtgaacat 18679517  T
Q  211 ct 212  Q
    ||    
T  18679516 ct 18679515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 18699549 - 18699312
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| ||||| ||||| |||||||| || |||||  | ||||||  ||||||||| ||||||||||||||||||||||||||||| |||||    
T  18699549 catcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacat 18699450  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    |||||||||||||||||||||  || |  | || || || ||||||||||  || || |||||||||||||||||||| ||||||||||||||||| |||    
T  18699449 cattcactgctacaagacaaaaggtcgtctcgttttgcctgttttctatggcgtagatcctactcacatacgacatcaaagtgggagttatggtgaacat 18699350  T
Q  211 cttagtaagcatgaagagaggtttcaaaataacgagaa 248  Q
    || | |||||| | | |||| || ||||||||| ||||    
T  18699349 ctcactaagcacggaaagagtttccaaaataacaagaa 18699312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 18073807 - 18073950
Alignment:
Q  31 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaa 130  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |    
T  18073807 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaacca 18073906  T
Q  131 agagttgcttagtatttcccgttttctatgatgtggaacctact 174  Q
    || ||||| | || || || ||||||| || |||||||||||||    
T  18073907 agggttgcctcgttttgcctgttttctttggtgtggaacctact 18073950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 18724234 - 18724024
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    ||||||| | ||| ||||| ||||| |||||||| || |||||  | ||||||  ||||||||| |||||||||||||||||| ||||||||||||||||    
T  18724234 catcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacat 18724135  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcat 210  Q
    ||| |||||||||||||||||| || |  | || || || ||||||||||  ||||| |||| |||||||||||| || ||||||||||||||||| |||    
T  18724134 catgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacaccaaagtgggagttatggtgaacat 18724035  T
Q  211 cttagtaagca 221  Q
    || | ||||||    
T  18724034 ctcactaagca 18724024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 17989182 - 17989088
Alignment:
Q  31 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaa 125  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  17989182 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaa 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 5091059 - 5090921
Alignment:
Q  68 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtgga 167  Q
    ||||||| |||||||| |||||||| || ||||||||||| || |||||||||| ||||  |||  ||||| | || || ||  ||||||||| ||||||    
T  5091059 actatgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtgga 5090960  T
Q  168 acctactcacatacgacatcagagtgggagttatggtga 206  Q
    |||| ||||  | ||| |||||| ||| |||||||||||    
T  5090959 accttctcatgtgcgatatcagactggaagttatggtga 5090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 59615 - 59758
Alignment:
Q  31 gaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaa 130  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || |    
T  59615 gaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaacca 59714  T
Q  131 agagttgcttagtatttcccgttttctatgatgtggaacctact 174  Q
    || ||||| | || || || ||||||| || |||||||||||||    
T  59715 agggttgcctcgttttgcctgttttctttggtgtggaacctact 59758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 3584 - 3462
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaac-tatgcatcttcttcattttgtttggacgaacttgtccaca 109  Q
    |||||||  |||||||||| || ||||||||||||||||||||  | ||||||  |||| ||||| ||||||||||||||||||||||||||||||||||    
T  3584 catcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccaca 3485  T
Q  110 tcattcactgctacaagacaaag 132  Q
    |||||||||||||||||||||||    
T  3484 tcattcactgctacaagacaaag 3462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 14517 - 14323
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  |||||||||| || ||||||||||||||||||||  | ||||||  ||||||||| | |||||| ||||||||||||||||||||||||||    
T  14517 catcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacat 14419  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
     ||||||||||||||||||||| || || | || || || |||||||  |  |||||||||||| || | ||||||||||  || |||||||||||    
T  14418 aattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtga 14323  T

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Target: scaffold0038 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 42991 - 43184
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| ||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||    
T  42991 catcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 43090  T
Q  111 cattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggt 204  Q
    ||||||||||| ||||| |||  |  || |||| || ||  |||||||||||||||||||| || || |  ||||||||| ||| |||||||||    
T  43091 cattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgagacatcagattggcagttatggt 43184  T

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Target: scaffold0038; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 27469 - 27588
Alignment:
Q  7 acatcatcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcc 106  Q
    |||||||||||| |||||| ||| ||||||||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||    
T  27469 acatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 27568  T
Q  107 acatcattcactgctacaag 126  Q
    |||||||||| |||| ||||    
T  27569 acatcattcattgcttcaag 27588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 34750 - 34865
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| |||||||||| ||||| ||||||||||| |||||  | || |||  ||| ||||| |||||||||||||| ||||||||||||||||||||    
T  34750 catcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 34849  T
Q  111 cattcactgctacaag 126  Q
    ||||||||||| ||||    
T  34850 cattcactgcttcaag 34865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 116823 - 116931
Alignment:
Q  13 tcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatca 112  Q
    |||||| |||||||||| ||||| ||||||||||| ||||| || || |||  ||| ||||| |||||||| ||||| ||||| |||||||||||||| |    
T  116823 tcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacatta 116922  T
Q  113 ttcactgct 121  Q
    |||||||||    
T  116923 ttcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 206
Target Start/End: Complemental strand, 4823 - 4638
Alignment:
Q  21 caaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgc 120  Q
    ||||||||| || ||||||||||||||||||||  | ||||||  |  |||||| | |||||| |||||||||||||||||||||||||| |||||||||    
T  4823 caaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgc 4724  T
Q  121 tacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga 206  Q
    |||||||||||| || || | || || || |||||||  |  |||||||||||| || | ||||||| ||  || |||||||||||    
T  4723 tacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatctgaaaggtagttatggtga 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 13794 - 13674
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  ||||   |||||| |||||||||||||| |||||    
T  13794 catcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacat 13695  T
Q  111 cattcactgctacaagacaaa 131  Q
     ||||| ||||||||||||||    
T  13694 tattcattgctacaagacaaa 13674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 58444 - 58334
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||| ||||||||||  |||| ||||||||||| |||||| | || |||  ||||||||| |||||||||||||| ||| ||||||||||||||||    
T  58444 catcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacat 58345  T
Q  111 cattcactgct 121  Q
    |||||||||||    
T  58344 cattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 3279714 - 3279823
Alignment:
Q  12 atcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatc 111  Q
    |||||||||||||||||||||||| || | ||||||||||||  | || |||  ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  3279714 atcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtccacatc 3279813  T
Q  112 attcactgct 121  Q
    ||||| ||||    
T  3279814 attcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 17993789 - 17993736
Alignment:
Q  68 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 121  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgct 17993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 3279857 - 3279908
Alignment:
Q  152 ttttctatgatgtggaacctactcacatacgacatcagagtgggagttatgg 203  Q
    |||||||||||||||||||| | ||| | |||||||||| ||||||||||||    
T  3279857 ttttctatgatgtggaaccttcccacgtgcgacatcagactgggagttatgg 3279908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 7550 - 7668
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacat 110  Q
    |||||||  ||||||||||||||||||||||||||||||||||  | ||||||  |||||| ||  ||||   |||||| |||||||||||||| |||||    
T  7550 catcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacat 7649  T
Q  111 cattcactgctacaagaca 129  Q
     ||||| ||||||||||||    
T  7650 tattcattgctacaagaca 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 79 - 37
Alignment:
Q  11 catcacttgtcaaggccatcgaagaatctaggatttttattcc 53  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  79 catcactcctcaaggccatcgaagaatctaggatttttattcc 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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