View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15772_low_2 (Length: 511)

Name: NF15772_low_2
Description: NF15772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15772_low_2
NF15772_low_2
[»] chr4 (28 HSPs)
chr4 (111-419)||(9538752-9539054)
chr4 (132-274)||(21161334-21161478)
chr4 (113-435)||(19374124-19374436)
chr4 (338-412)||(9488348-9488422)
chr4 (338-412)||(4546865-4546939)
chr4 (337-407)||(11421792-11421862)
chr4 (113-254)||(5523973-5524117)
chr4 (434-497)||(4546624-4546687)
chr4 (434-497)||(9538520-9538583)
chr4 (66-209)||(19363403-19363546)
chr4 (338-410)||(32637287-32637359)
chr4 (434-497)||(19373907-19373970)
chr4 (338-412)||(15462303-15462377)
chr4 (338-412)||(28917201-28917275)
chr4 (338-412)||(34976354-34976428)
chr4 (226-282)||(10725231-10725287)
chr4 (226-282)||(10939000-10939056)
chr4 (316-412)||(19363208-19363304)
chr4 (338-426)||(30039930-30040018)
chr4 (434-497)||(19362971-19363034)
chr4 (434-497)||(30040167-30040230)
chr4 (433-491)||(5524667-5524725)
chr4 (361-410)||(5617159-5617209)
chr4 (434-476)||(9488130-9488172)
chr4 (434-476)||(10677079-10677121)
chr4 (434-476)||(10890719-10890761)
chr4 (434-490)||(24701651-24701707)
chr4 (138-209)||(32637479-32637551)
[»] chr3 (9 HSPs)
chr3 (319-425)||(26817080-26817186)
chr3 (338-412)||(25978153-25978227)
chr3 (338-412)||(15316602-15316676)
chr3 (338-412)||(21399596-21399670)
chr3 (114-280)||(26817226-26817394)
chr3 (338-411)||(14147821-14147894)
chr3 (113-209)||(4471815-4471913)
chr3 (338-412)||(15845962-15846036)
chr3 (451-499)||(15316870-15316918)
[»] chr7 (19 HSPs)
chr7 (338-405)||(18258550-18258617)
chr7 (297-412)||(41680353-41680468)
chr7 (342-412)||(34129375-34129445)
chr7 (338-412)||(10666490-10666564)
chr7 (111-435)||(24442582-24442901)
chr7 (434-497)||(18258801-18258864)
chr7 (434-497)||(19393104-19393167)
chr7 (111-177)||(25844721-25844788)
chr7 (297-412)||(47166245-47166360)
chr7 (450-497)||(47166553-47166600)
chr7 (338-435)||(31189799-31189896)
chr7 (338-417)||(19389338-19389418)
chr7 (338-405)||(19392855-19392922)
chr7 (434-497)||(34129135-34129198)
chr7 (338-412)||(8465801-8465875)
chr7 (439-497)||(15168977-15169035)
chr7 (338-392)||(19231710-19231764)
chr7 (338-412)||(28131364-28131438)
chr7 (444-497)||(28131123-28131176)
[»] chr5 (14 HSPs)
chr5 (301-412)||(9811122-9811233)
chr5 (301-412)||(12703363-12703474)
chr5 (301-412)||(12764379-12764490)
chr5 (338-404)||(39428249-39428315)
chr5 (226-417)||(28719012-28719211)
chr5 (340-412)||(5098449-5098521)
chr5 (145-255)||(20084363-20084470)
chr5 (450-497)||(9811426-9811473)
chr5 (450-497)||(12764683-12764730)
chr5 (338-397)||(25804811-25804870)
chr5 (338-412)||(39535983-39536057)
chr5 (301-374)||(7864825-7864898)
chr5 (439-476)||(17282965-17283002)
chr5 (339-412)||(20941829-20941902)
[»] chr8 (13 HSPs)
chr8 (111-280)||(37031472-37031644)
chr8 (338-419)||(18836139-18836220)
chr8 (301-412)||(2962316-2962427)
chr8 (338-412)||(6431689-6431763)
chr8 (338-412)||(26652717-26652791)
chr8 (297-412)||(22658878-22658994)
chr8 (450-497)||(2962625-2962672)
chr8 (450-497)||(8781568-8781615)
chr8 (338-412)||(21970135-21970209)
chr8 (338-412)||(26241830-26241904)
chr8 (112-237)||(14984176-14984304)
chr8 (342-397)||(25612012-25612067)
chr8 (138-209)||(18836340-18836412)
[»] chr2 (8 HSPs)
chr2 (132-255)||(37444106-37444232)
chr2 (338-412)||(37443968-37444042)
chr2 (338-421)||(15341469-15341552)
chr2 (385-428)||(29801257-29801300)
chr2 (380-426)||(20686887-20686933)
chr2 (338-412)||(24228640-24228714)
chr2 (338-412)||(24763099-24763173)
chr2 (111-179)||(15341248-15341317)
[»] chr6 (11 HSPs)
chr6 (301-412)||(33317667-33317778)
chr6 (342-412)||(18019259-18019329)
chr6 (434-497)||(10358732-10358795)
chr6 (434-497)||(20736007-20736070)
chr6 (338-412)||(19219321-19219395)
chr6 (113-253)||(10358264-10358407)
chr6 (297-379)||(14075315-14075397)
chr6 (338-412)||(19734672-19734746)
chr6 (301-374)||(8613753-8613826)
chr6 (338-378)||(27507776-27507816)
chr6 (338-378)||(27524990-27525030)
[»] scaffold0086 (1 HSPs)
scaffold0086 (338-412)||(54566-54640)
[»] scaffold0023 (1 HSPs)
scaffold0023 (113-179)||(108335-108401)
[»] chr1 (7 HSPs)
chr1 (338-412)||(43801791-43801865)
chr1 (299-412)||(35936126-35936239)
chr1 (340-412)||(636773-636845)
chr1 (18-65)||(10007263-10007310)
chr1 (338-412)||(47666911-47666985)
chr1 (338-407)||(28134149-28134218)
chr1 (348-412)||(22613293-22613357)
[»] scaffold0466 (2 HSPs)
scaffold0466 (338-435)||(10311-10408)
scaffold0466 (450-490)||(12643-12683)
[»] scaffold0111 (1 HSPs)
scaffold0111 (338-435)||(27319-27415)
[»] scaffold0389 (1 HSPs)
scaffold0389 (338-412)||(964-1038)
[»] scaffold0112 (1 HSPs)
scaffold0112 (338-412)||(985-1059)
[»] scaffold0069 (1 HSPs)
scaffold0069 (338-412)||(28-102)
[»] scaffold0001 (1 HSPs)
scaffold0001 (338-412)||(138134-138208)
[»] scaffold0375 (1 HSPs)
scaffold0375 (444-497)||(15752-15805)
[»] scaffold0022 (1 HSPs)
scaffold0022 (338-412)||(73620-73694)
[»] scaffold0017 (1 HSPs)
scaffold0017 (338-412)||(128298-128372)
[»] scaffold0031 (1 HSPs)
scaffold0031 (450-490)||(39681-39721)


Alignment Details
Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 111 - 419
Target Start/End: Complemental strand, 9539054 - 9538752
Alignment:
Q  111 ttgatttcctttctttggaagattacaaatttgacatgatcagtgaaagaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaag 210  Q
    ||||||| |||| ||||||  ||||| ||||||||||||||||| |||||  |||||||||  ||||||  || | ||| |||||||||||  | |||      
T  9539054 ttgattttctttttttggatcattacgaatttgacatgatcagtaaaagatggttacctcttaaagtgcataaaacagtttcgatcacagctgatcaatc 9538955  T
Q  211 aagcaatgtctc--cttgtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggttcaagagaattacggttctagggtttctg 308  Q
     ||||| | |||  || ||||||||||| ||| ||||||||||||| | | | ||||||||||||| | ||||||||||       ||||||||||| |     
T  9538954 tagcaaagcctctactcgtccacacgaatggtgctcctctggttcctagtgctagccaagcgatcatatgttcaagaga-------ttctagggttttt- 9538863  T
Q  309 aaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccat 408  Q
    ||||| ||| |||||||||||||| |   ||||||||||||||||||||  ||||||| || | ||||||| | |||||| ||||||||||||||||  |    
T  9538862 aaaaacttgtaacctccgacttcagcacaagggttctatttatagaacttcttgtgtgttctgaaagtcagcagtcactactgggcttccgtaagcctgt 9538763  T
Q  409 taacccattta 419  Q
    |||||||||||    
T  9538762 taacccattta 9538752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 21161334 - 21161478
Alignment:
Q  132 attacaaatttgacatgatcagtgaaagaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaagaagcaatg--tctccttgtcc 229  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||  ||||| |  ||| |||||||    
T  21161334 attacgaatttgacatgatcagtgaaagaatgttacctctcgaagtgtagaaaagagtcttgatcacagcaaagcaaaagagcaaagcctctacttgtcc 21161433  T
Q  230 acacgaacggttctcctctggttcccactaccagccaagcgatca 274  Q
    ||||||| ||||||||||  |||||   ||| |||||||||||||    
T  21161434 acacgaatggttctcctccagttcctggtactagccaagcgatca 21161478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 113 - 435
Target Start/End: Complemental strand, 19374436 - 19374124
Alignment:
Q  113 gatttcctttctttggaagattacaaatttgacatgatcagtgaa-agaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaaga 211  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||  || |||||||||||||||||||  || ||| ||  ||||||||||||| ||| |    
T  19374436 gatttcctttccttggatcattacaaatttgacatgatgagtgattagtatgttacctctcgaagtgcataaaagaatcatgatcacagcaaagaaaaaa 19374337  T
Q  212 agcaatgtctccttgtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggttcaagagaattacggttctagggtttctgaaa 311  Q
       |   ||| || ||||||||||||||| ||||||| ||||||  | | ||||||||||||| |||||   ||||||||        ||||||||||||    
T  19374336 cagagcctctactcgtccacacgaacggtgctcctctagttcccggtgcaagccaagcgatcagaggtttgggagaatta--------gggtttctgaaa 19374245  T
Q  312 aatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaa 411  Q
      | |  |||||  ||||||| |   ||||||||||||||||||||| | | ||| || ||||||||| |||||||||||| ||||||||||||||||||    
T  19374244 cgtgt--aacctt-gacttcagcacaagggttctatttatagaactcctagcgtgttctgcaagtcagaaatcactattggtcttccgtaagcccattaa 19374148  T
Q  412 cccatttagcattttgcaaactaa 435  Q
    | |||||||| || ||| ||||||    
T  19374147 cgcatttagccttctgctaactaa 19374124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 9488422 - 9488348
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||| ||||    
T  9488422 agggttatatttatagaactctttgtgtgctctgcaagtcagaagtcactattgggcttcagtaagcccaataac 9488348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 4546939 - 4546865
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| || ||||||| ||||||||| | ||||||||||||||| ||||||||| ||||    
T  4546939 agggttctatttatagaactccttatgtgctctgcaagtcagaagtcactattgggcttcagtaagcccaataac 4546865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 11421862 - 11421792
Alignment:
Q  337 gagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagccca 407  Q
    |||||||||||||||||||||| | |||||||| ||||||||| | |  ||||||||||||||||||||||    
T  11421862 gagggttctatttatagaactcctagtgtgctctgcaagtcagaagtatctattgggcttccgtaagccca 11421792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 5523973 - 5524117
Alignment:
Q  113 gatttcctttctttggaagattacaaatttgacatgatcagtgaaagaa-tgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaaga 211  Q
    ||||||||||  |||||  ||||| ||||||||||||||||||| |||| |||||||||| ||||| | ||| ||| | | ||||||||||||||||       
T  5523973 gatttccttttcttggatcattacgaatttgacatgatcagtgatagaattgttacctcttgaagtacagaaaagaattttgatcacagcaaagcaacat 5524072  T
Q  212 agcaatgtctc--cttgtccacacgaacggttctcctctggttcc 254  Q
    || || |||||  || ||||||||||| ||||||||| |||||||    
T  5524073 agtaaagtctctactcgtccacacgaaaggttctcctttggttcc 5524117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 497
Target Start/End: Complemental strand, 4546687 - 4546624
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| |||| || |||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  4546687 aacacatcattgctatccaagtgacaagaatgtcaagtgatctaacgaaaccttttccatgata 4546624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 497
Target Start/End: Complemental strand, 9538583 - 9538520
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||||||||||||||||||||||||||||| ||||| ||||||   |||||||||||| |||||    
T  9538583 aacagatcactgttatccaagtgacaagaacgtcaactgatctgacgaaaccttttccatgata 9538520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 19363546 - 19363403
Alignment:
Q  66 tgaagggaaataaagta-caataataggcaacggaataaaacaacattgatttcctttctttggaagattacaaatttgacatgatcagtga-aagaatg 163  Q
    ||||||||||| || || ||| |||||||||||||||||||  |  ||||||| |||||||||||  ||||| |||||||||| ||||||||   |||||    
T  19363546 tgaagggaaatcaattaacaaaaataggcaacggaataaaa--attttgatttgctttctttggatcattacgaatttgacattatcagtgattcgaatg 19363449  T
Q  164 ttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaa 209  Q
    ||||||||||||| || ||   || ||||||||| | |||||||||    
T  19363448 ttacctctcgaagcgcagacaggaatctcgatcaaaacaaagcaaa 19363403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 32637359 - 32637287
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccatta 410  Q
    |||||| |||||||||||||| |  | ||||| ||||||||| | |||||||||| |||||||||||||||||    
T  32637359 agggttatatttatagaactcctaatatgctctgcaagtcagaagtcactattggacttccgtaagcccatta 32637287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 497
Target Start/End: Complemental strand, 19373970 - 19373907
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| ||||||| || ||||||||||||||||||||||| ||||  |||||||||||| |||||    
T  19373970 aacacatcactgctacccaagtgacaagaatgtcaagtgctctaacgaaaccttttccatgata 19373907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 15462377 - 15462303
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  15462377 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 15462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 28917201 - 28917275
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  28917201 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccagtaac 28917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 34976428 - 34976354
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  34976428 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 34976354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 10725231 - 10725287
Alignment:
Q  226 gtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggttca 282  Q
    |||||||||||| | |||||||||||||||  ||| ||||||||||||| |||||||    
T  10725231 gtccacacgaacagctctcctctggttcccggtactagccaagcgatcagaggttca 10725287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 10939000 - 10939056
Alignment:
Q  226 gtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggttca 282  Q
    |||||||||||| | |||||||||||||||  ||| ||||||||||||| |||||||    
T  10939000 gtccacacgaacagctctcctctggttcccggtactagccaagcgatcagaggttca 10939056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 412
Target Start/End: Complemental strand, 19363304 - 19363208
Alignment:
Q  316 tgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||| ||||||| |   |||||| ||||||||||||||   ||||| ||  || ||||| | ||||||||||||||| ||||||||||||||    
T  19363304 tgcaacctctgacttcagcacaagggttttatttatagaactccaagtgtgttctacacgtcagaattcactattgggcttctgtaagcccattaac 19363208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 426
Target Start/End: Original strand, 30039930 - 30040018
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccatttagcatttt 426  Q
    ||||||||||||||| ||||| | |||||||| ||||||||  | |||||||  |||||||||||||| | ||||   |||||||||||    
T  30039930 agggttctatttatataactcctagtgtgctctgcaagtcaaaagtcactatcaggcttccgtaagcctaataacgagtttagcatttt 30040018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Complemental strand, 19363034 - 19362971
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| ||||||| ||||||||| |||||||||||||||| ||||  |||| ||||||| |||||    
T  19363034 aacacatcactgctatccaagttacaagaatgtcaagtgctctaacgaaatcttttccatgata 19362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 30040167 - 30040230
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| |||| || ||||||||||||||||||||||||||||||   ||||| |||||| |||||    
T  30040167 aacacatcattgctatccaagtgacaagaatgtcaagtgatctgacgaaactttttccatgata 30040230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 491
Target Start/End: Original strand, 5524667 - 5524725
Alignment:
Q  433 taacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttcc 491  Q
    ||||| |||||| |||||||||||||| |||| |||||||||||   ||||||||||||    
T  5524667 taacacatcactcttatccaagtgacaggaatttcaagtgatctgacgaaaccttttcc 5524725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 5617209 - 5617159
Alignment:
Q  361 tgtgtgctccgcaagtca-gtaatcactattgggcttccgtaagcccatta 410  Q
    |||||||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  5617209 tgtgtgctctacaagtcaagtaatcactattgggcttcagtaagcccatta 5617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 476
Target Start/End: Complemental strand, 9488172 - 9488130
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatct 476  Q
    |||| |||| || ||||||||||||||||||||||||||||||    
T  9488172 aacacatcattgctatccaagtgacaagaatgtcaagtgatct 9488130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 476
Target Start/End: Original strand, 10677079 - 10677121
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatct 476  Q
    |||| ||||||| |||||||||||||||||||||| |||||||    
T  10677079 aacacatcactgctatccaagtgacaagaatgtcatgtgatct 10677121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 476
Target Start/End: Original strand, 10890719 - 10890761
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatct 476  Q
    |||| ||||||| |||||||||||||||||||||| |||||||    
T  10890719 aacacatcactgctatccaagtgacaagaatgtcatgtgatct 10890761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 490
Target Start/End: Complemental strand, 24701707 - 24701651
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttc 490  Q
    |||| ||||||| |||||||||||||| ||||||| |||||||   |||||||||||    
T  24701707 aacacatcactgctatccaagtgacaaaaatgtcatgtgatctgaagaaaccttttc 24701651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 32637551 - 32637479
Alignment:
Q  138 aatttgacatgatcagtgaa-agaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaa 209  Q
    ||||||||||||||| |||  |||||||||||||||||||| | ||   || ||||||||||| |||||||||    
T  32637551 aatttgacatgatcaatgattagaatgttacctctcgaagttcagacatgaatctcgatcacaacaaagcaaa 32637479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 26817186 - 26817080
Alignment:
Q  319 aacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccattt 418  Q
    |||||| |||||||||   ||||||||||| ||||||||| ||||||| || | ||||||| || || ||||||| |||||||||||||||||| |||||    
T  26817186 aacctctgacttcaacacaagggttctattgatagaactccttgtgtgttctgtaagtcagaaaacattattgggattccgtaagcccattaacacattt 26817087  T
Q  419 agcattt 425  Q
    |||||||    
T  26817086 agcattt 26817080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 25978153 - 25978227
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||| ||||||||| | |||| |||||| ||| ||||||||| ||||    
T  25978153 agggttctatttatagaactccttgtgtgctctgcaagtcagaagtcacaattgggtttcagtaagcccaataac 25978227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 15316602 - 15316676
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||| ||| |||| |||| |  |||||||||||||| ||||||||| ||||    
T  15316602 agggttctatttatagaactccttgtgttctctgcaattcagaagccactattgggcttcagtaagcccaataac 15316676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 21399670 - 21399596
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  21399670 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 21399596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 280
Target Start/End: Complemental strand, 26817394 - 26817226
Alignment:
Q  114 atttcctttctttggaagattacaaatttgacatgatcagtgaa-agaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaaga- 211  Q
    |||||||||| |||||  ||||| ||||||||||||| | |||  ||||||||||||||| ||||||  ||  || ||||||| ||||||||||||| |     
T  26817394 atttcctttccttggatcattacgaatttgacatgatgaatgattagaatgttacctctcaaagtgcataaaggaatctcgattacagcaaagcaaaaac 26817295  T
Q  212 -agcaatgtctccttgtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggtt 280  Q
     || |   ||| || |||||||||||| || ||||||||||||||  | | ||||||||||||| |||||    
T  26817294 tag-agcctctactcgtccacacgaacagtgctcctctggttcccgatgctagccaagcgatcagaggtt 26817226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 14147894 - 14147821
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaa 411  Q
    |||||| ||||||||||| || |  |||||||  |||||||| | ||||||||| |||||||||||||||||||    
T  14147894 agggttgtatttatagaaatcctattgtgctctacaagtcagaagtcactattgagcttccgtaagcccattaa 14147821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 4471913 - 4471815
Alignment:
Q  113 gatttcctttctttggaagattacaaatttgacatgatcagtga-aagaatgttacctctcgaagtgcgg--aagagagtctcgatcacagcaaagcaaa 209  Q
    ||||||||||| |||||  ||||| |||||||||||||||||||  |  |||||||||||| |||||| |  |||||| ||||||||||| |||||||||    
T  4471913 gatttcctttccttggatcattacgaatttgacatgatcagtgattaatatgttacctctc-aagtgcagaaaagagaatctcgatcacaacaaagcaaa 4471815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 15845962 - 15846036
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||||| |||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  15845962 agggttctctttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 15846036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 499
Target Start/End: Original strand, 15316870 - 15316918
Alignment:
Q  451 caagtgacaagaatgtcaagtgatctattgaaaccttttccttgatatt 499  Q
    |||||||||||||||||||||||| |   |||||||||||| |||||||    
T  15316870 caagtgacaagaatgtcaagtgatatgacgaaaccttttccatgatatt 15316918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 18258550 - 18258617
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcc 405  Q
    ||||||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||| |||||||    
T  18258550 agggttctatttatagaactccttgtgtgctctgcaagtcagaagtcactattgggcttcagtaagcc 18258617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 412
Target Start/End: Original strand, 41680353 - 41680468
Alignment:
Q  297 ctagggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggctt 396  Q
    ||||||||||| |||||  | |||||||  ||||||||   ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||    
T  41680353 ctagggtttctcaaaaacgtacaacctcaaacttcaacactagggttctatttatagaactccttgtgtgctctgcaagtcagaaaccactattggactt 41680452  T
Q  397 ccgtaagcccattaac 412  Q
    |  |||||||| ||||    
T  41680453 cattaagcccaataac 41680468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 34129445 - 34129375
Alignment:
Q  342 ttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||| |||||||||| ||||||||| |  |||||||||||||| ||||||||| ||||    
T  34129445 ttctatttatagaactccttgtgtgctctgcaagtcagaagccactattgggcttcagtaagcccaataac 34129375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 10666490 - 10666564
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| | |||||||| ||||||||| | |||||||| ||||||  |||||||| ||||    
T  10666490 agggttctatttatagaactcctagtgtgctctgcaagtcagaagtcactattaggcttcattaagcccaataac 10666564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 435
Target Start/End: Original strand, 24442582 - 24442901
Alignment:
Q  111 ttgatttcctttctttggaagattacaaatttgacatgatcagtgaa-agaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaa 209  Q
    ||||||| ||| | |||||  ||||| ||||||||||||||| |||  ||||||| |||||||||| ||| ||  ||| ||||||||||| |||||||||    
T  24442582 ttgattttcttgccttggatcattacgaatttgacatgatcaatgattagaatgtcacctctcgaattgcagacaagaatctcgatcacaacaaagcaaa 24442681  T
Q  210 gaagcaatgtctc--cttgtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggttcaagagaattacggttctagggtttct 307  Q
     |||||  | |||  ||  ||| || ||||||| ||||||||||||||  |   |||||||||||||||||||   ||||||||        |||||| |    
T  24442682 -aagcagagcctctactcttcctcatgaacggtgctcctctggttcccggtgttagccaagcgatcaaaggtttgggagaatta--------gggttttt 24442772  T
Q  308 gaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttcc--gtaagcc 405  Q
    |||||  | | |||||  ||||||| |   ||||||||||||||||||||| |  ||||||  | ||||||| | || ||||||||||| |  |||||||    
T  24442773 gaaaacgt-gtaacctttgacttcagcacaagggttctatttatagaactcctaatgtgctatggaagtcagaagtccctattgggcttacatgtaagcc 24442871  T
Q  406 cattaacccatttagcattttgcaaactaa 435  Q
    ||||||| |||||||| |||||| ||||||    
T  24442872 cattaactcatttagccttttgctaactaa 24442901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 18258801 - 18258864
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| |||| ||||| |||||||||||||||||||||||||||   |||||||||||| |||||    
T  18258801 aacacatcattgttacccaagtgacaagaatgtcaagtgatctgacgaaaccttttccatgata 18258864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 19393104 - 19393167
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| |||| || ||||||||||| ||||||||||||||||||  ||||||||||||| |||||    
T  19393104 aacacatcattgctatccaagtgagaagaatgtcaagtgatctgatgaaaccttttccatgata 19393167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 25844721 - 25844788
Alignment:
Q  111 ttgatttcctttctttggaagattacaaatttgacatgatcagtgaaagaa-tgttacctctcgaagt 177  Q
    ||||| ||||||| |||||  ||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  25844721 ttgatctcctttccttggatcattacgaatttgacatgatcagtgatagaattgttacctctcgaagt 25844788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 412
Target Start/End: Original strand, 47166245 - 47166360
Alignment:
Q  297 ctagggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggctt 396  Q
    ||||||||||| || ||| |||||||||  |||| | |   ||||||||||||||||||||| |  ||||||| ||||||||| |  |||||||||| ||    
T  47166245 ctagggtttctcaacaatgtgcaacctcaaactttagcactagggttctatttatagaactcctcatgtgctctgcaagtcagaagccactattgggttt 47166344  T
Q  397 ccgtaagcccattaac 412  Q
    | ||||||||| ||||    
T  47166345 cagtaagcccaataac 47166360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 47166553 - 47166600
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||    
T  47166553 ccaagtgacaagaatgtcaagtgatctaacgaaaccttttccatgata 47166600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 31189799 - 31189896
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccatttagcattttgcaaactaa 435  Q
    |||||||||||||||||||||||  ||||||  ||||||||  | ||||| |||||| ||||||| | |||||||   ||||| ||||||| ||||||    
T  31189799 agggttctatttatagaactcttactgtgctttgcaagtcacaagtcactgttgggcctccgtaatctcattaacgagtttagtattttgctaactaa 31189896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 19389418 - 19389338
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtca-gtaatcactattgggcttccgtaagcccattaacccatt 417  Q
    ||||||||||||||||||||  || ||||||| |||||||| ||||||| |  | ||||||  ||||||||||||||||||    
T  19389418 agggttctatttatagaactacttatgtgctcagcaagtcaggtaatcattcctaggcttctataagcccattaacccatt 19389338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 19392855 - 19392922
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcc 405  Q
    ||||||||||||||||||| | | ||||||||  |||||||| | ||||| |||||||||||| ||||    
T  19392855 agggttctatttatagaacacctagtgtgctctacaagtcagaagtcactgttgggcttccgtcagcc 19392922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Complemental strand, 34129198 - 34129135
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| |||| || |||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  34129198 aacacatcattgctatccaagtgacaagaatgtcaagtgatatgacgaaaccttttccatgata 34129135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 8465875 - 8465801
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||  |  ||||||||| ||||  |||||||| ||||    
T  8465875 agggttctatttatagaactccttgtgtgctatgcaagtcataagccactattggacttcactaagcccaataac 8465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 497
Target Start/End: Original strand, 15168977 - 15169035
Alignment:
Q  439 atcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    ||||||| || |||||||||||||||||||||||||||   ||||| |||||| |||||    
T  15168977 atcactgctacccaagtgacaagaatgtcaagtgatctgacgaaactttttccatgata 15169035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 19231764 - 19231710
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgg 392  Q
    ||||||||||||||||||||| |||||||||| | ||||||| |  |||||||||    
T  19231764 agggttctatttatagaactccttgtgtgctctgtaagtcagaagccactattgg 19231710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 28131438 - 28131364
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||  | | |||||| ||||||||  | ||||||||||||||| |||| |||| ||||    
T  28131438 agggttctatttatagaacttctagcgtgctcagcaagtcaaaagtcactattgggcttcagtaaccccaataac 28131364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 28131176 - 28131123
Alignment:
Q  444 tgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    ||||| ||||||||||||||||||||||||| |   |||||||||||| |||||    
T  28131176 tgttacccaagtgacaagaatgtcaagtgatatgacgaaaccttttccatgata 28131123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 9811122 - 9811233
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgt 400  Q
    ||||||| |||||| |||||||||  ||||||     ||||||||||||||||||||| |||||||||| ||||||||| |  |||||||||||||| ||    
T  9811122 ggtttctcaaaaatgtgcaacctcaaacttcagtaatagggttctatttatagaactccttgtgtgctctgcaagtcagaagccactattgggcttcagt 9811221  T
Q  401 aagcccattaac 412  Q
    ||||||| ||||    
T  9811222 aagcccaataac 9811233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 12703363 - 12703474
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgt 400  Q
    ||||||| |||||| |||||||||  ||||||     ||||||||||||||||||||| |||||||||| ||||||||| |  |||||||||||||| ||    
T  12703363 ggtttctcaaaaatgtgcaacctcaaacttcagtaatagggttctatttatagaactccttgtgtgctctgcaagtcagaagccactattgggcttcagt 12703462  T
Q  401 aagcccattaac 412  Q
    ||||||| ||||    
T  12703463 aagcccaataac 12703474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 12764379 - 12764490
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgt 400  Q
    ||||||| |||||| |||||||||  ||||||     ||||||||||||||||||||| |||||||||| ||||||||| |  |||||||||||||| ||    
T  12764379 ggtttctcaaaaatgtgcaacctcaaacttcagtaatagggttctatttatagaactccttgtgtgctctgcaagtcagaagccactattgggcttcagt 12764478  T
Q  401 aagcccattaac 412  Q
    || |||| ||||    
T  12764479 aatcccaataac 12764490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 39428315 - 39428249
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagc 404  Q
    ||||||||||||||||||||| ||||||| || ||||||||| | ||||||||||||||| ||||||    
T  39428315 agggttctatttatagaactccttgtgtgttctgcaagtcagaagtcactattgggcttcagtaagc 39428249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 417
Target Start/End: Original strand, 28719012 - 28719211
Alignment:
Q  226 gtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggttcaa-gagaattacggttc------tagggtttctg-aaaaatttg 317  Q
    ||||||||||||||||||||||| ||||||| | | ||||||||||||| ||||| |  |||||||| ||||       ||||||||||  ||||| |||    
T  28719012 gtccacacgaacggttctcctctagttcccaatgctagccaagcgatcagaggttgagtgagaattagggtttcaactttagggtttctccaaaaacttg 28719111  T
Q  318 caacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtca-gtaatcactattgggcttccgtaagcccattaacccat 416  Q
     ||| ||  ||||||||   || |||||||||||||||||  |||||||||| ||||  || |||||||||||||||||||  ||||||| |||||||||    
T  28719112 taac-tctaacttcaacacaagagttctatttatagaactacttgtgtgctctgcaaaccaagtaatcactattgggcttcaataagcccgttaacccat 28719210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 5098521 - 5098449
Alignment:
Q  340 ggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||| | |||||||| ||||||||| | |||||||||| |||| ||||||||| ||||    
T  5098521 ggttctatttatagaactcctagtgtgctctgcaagtcagaagtcactattggacttcagtaagcccaataac 5098449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 20084363 - 20084470
Alignment:
Q  145 catgatcagtgaaagaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaagaagcaatgtctccttgtccacacgaacggttctc 244  Q
    ||||||||||||||||||||||||||||||||||| ||  | ||||| ||||| | ||||| |||| || | | ||| || ||||||||||||||| |||    
T  20084363 catgatcagtgaaagaatgttacctctcgaagtgcaga--aaagtcttgatcataacaaagtaaag-agtagtctctactagtccacacgaacggtgctc 20084459  T
Q  245 ctctggttccc 255  Q
    |||| ||||||    
T  20084460 ctctagttccc 20084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 9811426 - 9811473
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||||||||||||||||||||||||||   |||||||||||| |||||    
T  9811426 ccaagtgacaagaatgtcaagtgatctgacgaaaccttttccatgata 9811473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 12764683 - 12764730
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||||||||||||||||||||||||||   |||||||||||| |||||    
T  12764683 ccaagtgacaagaatgtcaagtgatctgacgaaaccttttccatgata 12764730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 25804811 - 25804870
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttc 397  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||    
T  25804811 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttc 25804870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 39536057 - 39535983
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||||||||||||||||||   |||||||  |||||||||   ||| |||||||||||| |||||||| ||||    
T  39536057 agggttctatttatagaactccaagtgtgctatgcaagtcagatttcagtattgggcttccataagcccaataac 39535983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 7864825 - 7864898
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaa 374  Q
    ||||||| |||||  |||||||||  |||||| |   ||||||||||||||||||||| |||||||||| ||||    
T  7864825 ggtttctcaaaaacgtgcaacctcaaacttcagcaatagggttctatttatagaactccttgtgtgctctgcaa 7864898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 476
Target Start/End: Original strand, 17282965 - 17283002
Alignment:
Q  439 atcactgttatccaagtgacaagaatgtcaagtgatct 476  Q
    ||||||| || |||||||||||||||||||||||||||    
T  17282965 atcactgctacccaagtgacaagaatgtcaagtgatct 17283002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 20941902 - 20941829
Alignment:
Q  339 gggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||| |||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  20941902 gggttatatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcattaagcccaataac 20941829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 280
Target Start/End: Original strand, 37031472 - 37031644
Alignment:
Q  111 ttgatttcctttctttggaagattacaaatttgacatgatcagtgaaagaa-tgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaa 209  Q
    ||||||||||||| |||||  ||||| ||||| ||||||||||||| |||| |||||||||| ||||||| ||| ||| | ||||||||| ||||||||     
T  37031472 ttgatttcctttccttggatcattacgaatttaacatgatcagtgatagaattgttacctcttgaagtgcagaaaagaatttcgatcacatcaaagcaat 37031571  T
Q  210 gaagcaatg--tctccttgtccacacgaacggttctcctctggttcccactaccagccaagcgatcaaaggtt 280  Q
      ||||| |  ||| || ||||||| ||||||||||||| | |||||   | | ||||||||||||| |||||    
T  37031572 agagcaaagcctctactcgtccacaagaacggttctcctatagttcctggtgctagccaagcgatcataggtt 37031644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 419
Target Start/End: Complemental strand, 18836220 - 18836139
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccattta 419  Q
    |||||||||||||||||||||   ||||| || |||||| || | ||| |||||||||||||||||||||||||| ||||||    
T  18836220 agggttctatttatagaactccaagtgtgttctgcaagttagaattcaatattgggcttccgtaagcccattaactcattta 18836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 2962316 - 2962427
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgt 400  Q
    ||||||| |||||  |||||||||  |||||| |   ||||||||||||||||||||| || |||||||  |||||||| |  |||||||||||||| ||    
T  2962316 ggtttctaaaaaacgtgcaacctcaaacttcagcaatagggttctatttatagaactccttatgtgctcttcaagtcagaagccactattgggcttcagt 2962415  T
Q  401 aagcccattaac 412  Q
    ||||||| ||||    
T  2962416 aagcccaataac 2962427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 6431763 - 6431689
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| ||||||||||  |||||||| |  |||||||||| ||| ||||||||| ||||    
T  6431763 agggttctatttatagaactccttgtgtgctcttcaagtcagaagccactattgggtttcagtaagcccaataac 6431689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 26652717 - 26652791
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  26652717 agggttctatttatagaactccttgtgtgctctgcaagtcagaagccactattggacttcactaagcccaataac 26652791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 412
Target Start/End: Original strand, 22658878 - 22658994
Alignment:
Q  297 ctagggtttctg-aaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggct 395  Q
    |||||||||||  |||||| |||||||||  |||||| | | ||||||||||||||||||||| ||||||||||  |||||||| |  ||||||||  ||    
T  22658878 ctagggtttctccaaaaatgtgcaacctcaaacttcagcattagggttctatttatagaactccttgtgtgctctacaagtcagaagccactattgaact 22658977  T
Q  396 tccgtaagcccattaac 412  Q
    ||  |||||||| ||||    
T  22658978 tcattaagcccaataac 22658994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 2962625 - 2962672
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||    
T  2962625 ccaagtgacaagaatgtcaagtgatctaacgaaaccttttccatgata 2962672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 8781568 - 8781615
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8781568 ccaagtgacaagaatgtcaagtgatctaacgaaacattttccttgata 8781615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 21970209 - 21970135
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  21970209 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 21970135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 26241904 - 26241830
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  26241904 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 26241830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 14984304 - 14984176
Alignment:
Q  112 tgatttcctttctttggaagattacaaatttgacatgatcagtga-aagaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaag 210  Q
    |||||||||||| | |||  ||||| ||||||||||||||| |||  | | |||||||||| ||||||| ||| ||  | ||||||||| |||||||| |    
T  14984304 tgatttcctttcctaggatcattacgaatttgacatgatcaatgatgaaactgttacctcttgaagtgctgaaaaggatttcgatcacaacaaagcaatg 14984205  T
Q  211 aagcaatgtctc--cttgtccacacgaac 237  Q
     |||| ||||||  |||||||||||||||    
T  14984204 tagcagtgtctctacttgtccacacgaac 14984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 25612067 - 25612012
Alignment:
Q  342 ttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttc 397  Q
    ||||||||||||||||| |||||||||  ||||||||| | |||||||||| ||||    
T  25612067 ttctatttatagaactccttgtgtgctatgcaagtcagaagtcactattggacttc 25612012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 18836412 - 18836340
Alignment:
Q  138 aatttgacatgatcagtga-aagaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaa 209  Q
    |||||||||||||||||||    |||||||||||||||||||| ||   || ||||||||||| |||||||||    
T  18836412 aatttgacatgatcagtgattcaaatgttacctctcgaagtgcagacaggaatctcgatcacaacaaagcaaa 18836340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 37444232 - 37444106
Alignment:
Q  132 attacaaatttgacatgatcagtgaaagaatgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaaga-agcaatg--tctccttgtc 228  Q
    ||||| ||||||||||||||| ||| ||| |||||||||| ||||||| ||| ||| ||||||||||| ||||| ||| | ||||| |  ||| || |||    
T  37444232 attacgaatttgacatgatcaatgatagattgttacctcttgaagtgcagaaaagattctcgatcacaacaaagtaaaaagagcaaagcctctactcgtc 37444133  T
Q  229 cacacgaacggttctcctctggttccc 255  Q
    |||||||||||| ||||| ||||||||    
T  37444132 cacacgaacggtgctcctttggttccc 37444106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 37444042 - 37443968
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||| ||||||||||||| | |||||||| ||||||| | | ||| ||||||||||||||||||||||||||    
T  37444042 agggttcaatttatagaactcctagtgtgctctgcaagtcggaagtcattattgggcttccgtaagcccattaac 37443968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 15341469 - 15341552
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccatttagc 421  Q
    |||||||||||||||||| || | ||||| || ||||||||| ||| | ||||||||| |||||| ||||||||| ||||||||    
T  15341469 agggttctatttatagaattcctagtgtgttctgcaagtcagaaattaatattgggctaccgtaaccccattaacgcatttagc 15341552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 29801300 - 29801257
Alignment:
Q  385 actattgggcttccgtaagcccattaacccatttagcattttgc 428  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  29801300 actattggacttccgtaagcccattaacccatttagcattttgc 29801257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 20686887 - 20686933
Alignment:
Q  380 taatcactattgggcttccgtaagcccattaacccatttagcatttt 426  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  20686887 taatcactactggacttccgtaagcccattaacccatttagcctttt 20686933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 24228640 - 24228714
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||| ||||||||  |  ||||||||| ||||  |||||||| ||||    
T  24228640 agggttctatttatagaactccttgtgtgctctgcaagtcaaaagccactattggacttcattaagcccaataac 24228714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 24763099 - 24763173
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| | |||||||  ||||||||  | |||||||| ||||| |||||||||| ||||    
T  24763099 agggttctatttatagaactcctagtgtgctttgcaagtcaaaagtcactattaggctttcgtaagcccaataac 24763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 15341248 - 15341317
Alignment:
Q  111 ttgatttcctttctttggaagattacaaatttgacatgatcagtga-aagaatgttacctctcgaagtgc 179  Q
    ||||||||| ||| |||||  ||||| |||||||||||||||||||  || |||||| ||||||||||||    
T  15341248 ttgatttcccttccttggatcattacgaatttgacatgatcagtgattagtatgttaactctcgaagtgc 15341317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 33317778 - 33317667
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgt 400  Q
    ||||||| |||||  |||||||||  |||||| |   ||||||||||||||||||||  |||||||||| ||||||||| |  |||||| ||||||| ||    
T  33317778 ggtttctcaaaaacgtgcaacctcaaacttcagcaatagggttctatttatagaacttcttgtgtgctctgcaagtcagaagccactatggggcttcagt 33317679  T
Q  401 aagcccattaac 412  Q
    ||||||| ||||    
T  33317678 aagcccaataac 33317667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 18019259 - 18019329
Alignment:
Q  342 ttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||||||||||||||||||||||||  ||||||||| | |||||||||| ||||  |||||||| ||||    
T  18019259 ttctatttatagaactctttgtgtgctatgcaagtcagaagtcactattggacttcactaagcccaataac 18019329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 10358732 - 10358795
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||   |||||||||||| |||||    
T  10358732 aacaaatcactgctatccaagtgacaagaatgccaagtgatctgacgaaaccttttccatgata 10358795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 20736007 - 20736070
Alignment:
Q  434 aacagatcactgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    |||| |||| || ||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  20736007 aacacatcattgctatccaagtgacaagaatgtcaagtgatctgacgaaaccttttccatgata 20736070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 19219395 - 19219321
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||||||||||||||||||   ||||| || ||||||||| | | |||||||| ||| |||||||||||||||    
T  19219395 agggttctatttatagaactccaagtgtgttctgcaagtcagaatttactattggactttcgtaagcccattaac 19219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 10358264 - 10358407
Alignment:
Q  113 gatttcctttctttggaagattacaaatttgacatgatcagtgaaagaa-tgttacctctcgaagtgcggaagagagtctcgatcacagcaaagcaaaga 211  Q
    ||||| ||||| |||||  ||||| |||| ||||||| |||||| |||| |||||||||| ||||||| ||| | ||| ||||| |||||  ||||| |     
T  10358264 gattttctttccttggatcattacgaattcgacatgaacagtgatagaaatgttacctcttgaagtgcagaaaacagtttcgattacagctgagcaacgt 10358363  T
Q  212 agcaatgtctc--cttgtccacacgaacggttctcctctggttc 253  Q
    ||||| | |||  || ||||||||||| ||||||||||| ||||    
T  10358364 agcaaagcctctactcgtccacacgaatggttctcctctagttc 10358407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 14075397 - 14075315
Alignment:
Q  297 ctagggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcag 379  Q
    ||||||||||| |||||| |  ||||||  |||||| |   ||||||||||||||||||||| ||||||| || |||||||||    
T  14075397 ctagggtttctcaaaaatgtaaaacctcaaacttcagcactagggttctatttatagaactccttgtgtgttctgcaagtcag 14075315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 19734672 - 19734746
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||| ||||||||| | ||| ||||  ||||| || | | | ||||||||||||||||||||||||||    
T  19734672 agggttctattcatagaactcctagtgagctctccaagtaagaagtaattattgggcttccgtaagcccattaac 19734746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 8613826 - 8613753
Alignment:
Q  301 ggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaa 374  Q
    ||||||| |||||  |||||||||  |||||| |   ||||||||||||||||||||| |||||||||| ||||    
T  8613826 ggtttctcaaaaacgtgcaacctcaaacttcagcaatagggttctatttatagaactccttgtgtgctctgcaa 8613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 27507776 - 27507816
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtca 378  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  27507776 agggttctatttatagaactctttatgtgctttgcaagtca 27507816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 27524990 - 27525030
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtca 378  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  27524990 agggttctatttatagaactctttatgtgctttgcaagtca 27525030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 54640 - 54566
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||||||||||||||| || | |||||||  ||||||||| ||||||||||||||||| ||||| ||| ||||    
T  54640 agggttctatttatagaaatcctagtgtgctttgcaagtcagaaatcactattgggcttcagtaagtccaataac 54566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 108335 - 108401
Alignment:
Q  113 gatttcctttctttggaagattacaaatttgacatgatcagtgaaagaatgttacctctcgaagtgc 179  Q
    ||||||||||| |||||  ||||  |||||||||||||  |||||||||||||||||||||||||||    
T  108335 gatttcctttcattggatcattatgaatttgacatgattggtgaaagaatgttacctctcgaagtgc 108401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 43801791 - 43801865
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| | |||||||||  ||||  |||||||||||||    
T  43801791 agggttctatttatagaactccttgtgtgctatgcaagtcagaagtcactattgtacttctctaagcccattaac 43801865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 35936239 - 35936126
Alignment:
Q  299 agggtttctgaaaaatttgcaacctccgacttcaacgtgagggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttcc 398  Q
    ||||||||| |||||| |||||| ||  |||||| |   | ||||||||||||||||||| |||||||||  ||||||||| | |||||||||| ||||     
T  35936239 agggtttctcaaaaatgtgcaacatcaaacttcagcactatggttctatttatagaactccttgtgtgctttgcaagtcagaagtcactattggacttca 35936140  T
Q  399 gtaagcccattaac 412  Q
     |||||||| ||||    
T  35936139 ctaagcccaataac 35936126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 636845 - 636773
Alignment:
Q  340 ggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||| | |||||||| ||||||||| | |||||||| ||||||  |||||||| ||||    
T  636845 ggttctatttatagaactcctagtgtgctctgcaagtcagaagtcactattaggcttcattaagcccaataac 636773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 10007263 - 10007310
Alignment:
Q  18 agtacaaccacttgtagctagaaataacctccaagtggtggatttaat 65  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  10007263 agtacaaccatttgtagctagaaataaccttcaagaggtggatttaat 10007310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 47666911 - 47666985
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  47666911 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 47666985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 28134149 - 28134218
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagccca 407  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  ||||||||    
T  28134149 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagccca 28134218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 22613357 - 22613293
Alignment:
Q  348 ttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||| |||||||||  ||||||||| | |||||||||| ||||  |||||||| ||||    
T  22613357 ttatagaactccttgtgtgctatgcaagtcagaagtcactattggacttcactaagcccaataac 22613293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 10311 - 10408
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccatttagcattttgcaaactaa 435  Q
    ||||||||| ||||||||||| | |||||||  ||||||||| | |||||||||| ||||||||||| || ||||   ||||| ||||||| ||||||    
T  10311 agggttctacttatagaactcctagtgtgctttgcaagtcagaagtcactattggccttccgtaagcacaataacgagtttagtattttgctaactaa 10408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Original strand, 12643 - 12683
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttc 490  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  12643 ccaagtgacaagaatgtcaagtgatctgacgaaaccttttc 12683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 27415 - 27319
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaacccatttagcattttgcaaactaa 435  Q
    |||||||||||||||||| |  | |||||||| ||||||||| | ||||||||||||||||||||||| | ||||   |||||  |||||||||||||    
T  27415 agggttctatttatagaaattctagtgtgctctgcaagtcag-agtcactattgggcttccgtaagccgaataacgagtttagtcttttgcaaactaa 27319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 1038 - 964
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  1038 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 1059 - 985
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  1059 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 102 - 28
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  102 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 28  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 138134 - 138208
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  138134 agggttctatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 138208  T

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Target: scaffold0375 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 15805 - 15752
Alignment:
Q  444 tgttatccaagtgacaagaatgtcaagtgatctattgaaaccttttccttgata 497  Q
    ||||||||||||||||||||||| | ||||||||  |||||||||||| |||||    
T  15805 tgttatccaagtgacaagaatgtgatgtgatctaacgaaaccttttccgtgata 15752  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 73620 - 73694
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||| |||||||||||||| |||||||||  ||||||||| |  ||||||||| ||||  |||||||| ||||    
T  73620 agggttttatttatagaactccttgtgtgctatgcaagtcagaagccactattggacttcactaagcccaataac 73694  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 128372 - 128298
Alignment:
Q  338 agggttctatttatagaactctttgtgtgctccgcaagtcagtaatcactattgggcttccgtaagcccattaac 412  Q
    |||||||||||||||||| || || ||||||| |||||| || | |||||||||| ||||  |||||||| ||||    
T  128372 agggttctatttatagaattccttatgtgctctgcaagttagaagtcactattggacttcattaagcccaataac 128298  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Original strand, 39681 - 39721
Alignment:
Q  450 ccaagtgacaagaatgtcaagtgatctattgaaaccttttc 490  Q
    |||||||||||||||||||||||||||  |||||| |||||    
T  39681 ccaagtgacaagaatgtcaagtgatctgatgaaactttttc 39721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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