View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15772_low_3 (Length: 396)
Name: NF15772_low_3
Description: NF15772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15772_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 23 - 382
Target Start/End: Original strand, 14959082 - 14959444
Alignment:
| Q |
23 |
atcgtgacacgatttggaacataaatccaaatttggcctcatcttttttcatgagagaacttcctcaaatctagacatgatttccagtagtttaaaaatc |
122 |
Q |
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| T |
14959082 |
atcgtgacacgatttggaacataaatccaaatttggcctcatcttttttcatcagagaacttcctcaaatctagccatgatttccagtagttcaaaaatc |
14959181 |
T |
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| Q |
123 |
atttgacagttacacaaatttgg---cacaattatacaaaatcgtgataggatttgtcaagagacccgaatattcacaaattcgacatatttcagctcaa |
219 |
Q |
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| T |
14959182 |
atttgacagttacacaaatatggtggcacaattatacaaaatcgtgacaagatttgtcaagagacccgaatattcacaaattcgccatatttcagctcaa |
14959281 |
T |
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| Q |
220 |
acttatatccatttcatattacccattccatcacaaacaccaaacctacctaaaccaaacaatcctcatacatcaaacattaaactcaatctcaatctcc |
319 |
Q |
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| T |
14959282 |
acttatatccatttcatattactcattccatcacaaacaccaaacctacctaaaccaaacaatccttatacatcaaacattaaactcaatctcaatctcc |
14959381 |
T |
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| Q |
320 |
ttatcaaaaacctacccatttcactaaaacatcacaaacctcacaaatgtctccaaccaagat |
382 |
Q |
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| T |
14959382 |
ttatcaaaaatctacgcatttcactaaaacatcaaaaacctcacaaatgtctccaaccaagat |
14959444 |
T |
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