View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15773_high_50 (Length: 214)

Name: NF15773_high_50
Description: NF15773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15773_high_50
NF15773_high_50
[»] chr3 (26 HSPs)
chr3 (29-198)||(6093141-6093299)
chr3 (45-183)||(44186859-44186998)
chr3 (28-183)||(30766391-30766547)
chr3 (40-119)||(44072773-44072852)
chr3 (40-111)||(918794-918865)
chr3 (66-184)||(22759056-22759174)
chr3 (86-157)||(35437198-35437269)
chr3 (86-184)||(26035813-26035911)
chr3 (134-183)||(188727-188777)
chr3 (86-156)||(36164857-36164927)
chr3 (102-185)||(5240947-5241031)
chr3 (134-187)||(15315269-15315324)
chr3 (28-82)||(188659-188713)
chr3 (28-82)||(37611459-37611513)
chr3 (134-183)||(39576525-39576575)
chr3 (87-153)||(54792723-54792789)
chr3 (134-185)||(8396757-8396809)
chr3 (86-185)||(12157707-12157807)
chr3 (134-181)||(16496368-16496416)
chr3 (143-185)||(22477906-22477949)
chr3 (143-184)||(4137399-4137441)
chr3 (143-184)||(18688674-18688716)
chr3 (143-184)||(35861002-35861044)
chr3 (134-183)||(52843176-52843226)
chr3 (143-183)||(19360735-19360776)
chr3 (143-186)||(50742296-50742340)
[»] chr2 (19 HSPs)
chr2 (25-184)||(32725990-32726149)
chr2 (52-152)||(24278962-24279062)
chr2 (40-124)||(35357671-35357755)
chr2 (40-118)||(3711054-3711132)
chr2 (40-118)||(11866284-11866362)
chr2 (134-185)||(7364771-7364823)
chr2 (115-185)||(30922096-30922167)
chr2 (77-185)||(1691425-1691535)
chr2 (86-184)||(17026060-17026158)
chr2 (87-183)||(25124044-25124141)
chr2 (134-184)||(4289027-4289078)
chr2 (86-183)||(10820973-10821070)
chr2 (143-184)||(16723661-16723703)
chr2 (86-156)||(17092245-17092315)
chr2 (143-183)||(9916707-9916748)
chr2 (87-156)||(14753577-14753645)
chr2 (143-187)||(28609953-28609998)
chr2 (28-68)||(7364717-7364757)
chr2 (134-184)||(22374080-22374132)
[»] chr8 (26 HSPs)
chr8 (77-184)||(27272620-27272728)
chr8 (28-184)||(12660957-12661114)
chr8 (86-185)||(12249910-12250010)
chr8 (86-185)||(23626054-23626154)
chr8 (86-185)||(39445197-39445297)
chr8 (87-185)||(41907954-41908053)
chr8 (40-185)||(44213034-44213180)
chr8 (86-184)||(2961008-2961105)
chr8 (40-118)||(20662985-20663063)
chr8 (40-118)||(30548348-30548426)
chr8 (28-82)||(11697032-11697086)
chr8 (134-183)||(11697101-11697151)
chr8 (105-185)||(32569575-32569656)
chr8 (86-185)||(39204807-39204908)
chr8 (134-184)||(18375557-18375608)
chr8 (143-185)||(24055841-24055884)
chr8 (134-184)||(41158635-41158686)
chr8 (28-118)||(4634853-4634942)
chr8 (102-187)||(8307504-8307590)
chr8 (143-184)||(36778480-36778522)
chr8 (143-183)||(40586443-40586484)
chr8 (145-184)||(7391324-7391364)
chr8 (143-186)||(8160417-8160461)
chr8 (143-186)||(8763013-8763057)
chr8 (88-156)||(21543180-21543247)
chr8 (143-186)||(27273878-27273922)
[»] chr5 (22 HSPs)
chr5 (28-184)||(2366839-2366996)
chr5 (86-184)||(9702652-9702751)
chr5 (67-181)||(19365869-19365984)
chr5 (86-184)||(9809820-9809918)
chr5 (86-183)||(12702061-12702158)
chr5 (77-185)||(32977100-32977209)
chr5 (86-184)||(7863528-7863624)
chr5 (62-184)||(18037229-18037353)
chr5 (134-185)||(36366123-36366175)
chr5 (86-168)||(12763092-12763174)
chr5 (134-184)||(22602634-22602685)
chr5 (67-184)||(38041490-38041609)
chr5 (28-82)||(22602699-22602753)
chr5 (40-118)||(37464476-37464554)
chr5 (134-183)||(42819330-42819380)
chr5 (28-82)||(36366189-36366243)
chr5 (134-184)||(8350241-8350292)
chr5 (134-184)||(34719449-34719500)
chr5 (134-183)||(25695539-25695589)
chr5 (143-183)||(3086433-3086474)
chr5 (143-186)||(752053-752097)
chr5 (134-185)||(13596910-13596962)
[»] chr6 (24 HSPs)
chr6 (86-184)||(1932283-1932382)
chr6 (27-184)||(2624721-2624879)
chr6 (86-185)||(33318995-33319092)
chr6 (86-185)||(4425851-4425951)
chr6 (54-181)||(22975720-22975848)
chr6 (54-181)||(23812553-23812681)
chr6 (40-118)||(250020-250098)
chr6 (40-118)||(12579844-12579922)
chr6 (40-183)||(33979081-33979226)
chr6 (28-82)||(11272685-11272739)
chr6 (72-184)||(33300597-33300710)
chr6 (134-185)||(18389166-18389218)
chr6 (62-130)||(3052060-3052128)
chr6 (30-82)||(11470837-11470889)
chr6 (94-185)||(5753125-5753213)
chr6 (86-171)||(8615029-8615112)
chr6 (134-184)||(11272753-11272804)
chr6 (134-185)||(24447786-24447838)
chr6 (143-185)||(6966235-6966278)
chr6 (143-184)||(25540849-25540891)
chr6 (143-183)||(4110061-4110102)
chr6 (28-68)||(18389232-18389272)
chr6 (134-185)||(33319564-33319616)
chr6 (134-185)||(35160114-35160166)
[»] chr1 (25 HSPs)
chr1 (86-188)||(28565425-28565528)
chr1 (86-185)||(28631754-28631854)
chr1 (77-186)||(23909713-23909824)
chr1 (72-185)||(34265874-34265988)
chr1 (86-155)||(12714915-12714984)
chr1 (86-156)||(15317589-15317659)
chr1 (28-82)||(20767479-20767533)
chr1 (28-82)||(26429187-26429241)
chr1 (102-184)||(43118896-43118977)
chr1 (63-152)||(1954373-1954462)
chr1 (134-186)||(3929745-3929798)
chr1 (125-188)||(4893950-4894014)
chr1 (121-185)||(29693366-29693431)
chr1 (143-187)||(42682592-42682637)
chr1 (134-181)||(13662121-13662169)
chr1 (143-189)||(1375982-1376029)
chr1 (28-82)||(3929812-3929867)
chr1 (83-185)||(9112131-9112234)
chr1 (143-185)||(10763588-10763631)
chr1 (134-184)||(20767547-20767598)
chr1 (143-184)||(29840689-29840731)
chr1 (143-184)||(38896815-38896857)
chr1 (143-184)||(46623376-46623418)
chr1 (125-185)||(29184476-29184537)
chr1 (144-184)||(47137860-47137901)
[»] scaffold0103 (1 HSPs)
scaffold0103 (53-186)||(12933-13067)
[»] scaffold0088 (1 HSPs)
scaffold0088 (86-186)||(52690-52791)
[»] chr7 (27 HSPs)
chr7 (86-185)||(42996884-42996984)
chr7 (86-186)||(9226018-9226119)
chr7 (86-184)||(38434277-38434376)
chr7 (40-118)||(19033713-19033791)
chr7 (40-118)||(20720845-20720923)
chr7 (66-184)||(42298807-42298926)
chr7 (40-118)||(20765507-20765585)
chr7 (67-183)||(23476587-23476705)
chr7 (40-118)||(29491085-29491163)
chr7 (59-118)||(33230019-33230078)
chr7 (40-118)||(34282161-34282239)
chr7 (66-158)||(45121953-45122045)
chr7 (134-184)||(12960598-12960649)
chr7 (28-80)||(12960530-12960582)
chr7 (134-184)||(27840505-27840556)
chr7 (28-82)||(27840437-27840491)
chr7 (134-187)||(39278229-39278283)
chr7 (134-186)||(17817710-17817763)
chr7 (134-185)||(21669230-21669282)
chr7 (125-184)||(31896813-31896873)
chr7 (143-185)||(691289-691332)
chr7 (103-184)||(1484767-1484849)
chr7 (64-158)||(8998425-8998519)
chr7 (143-184)||(39647981-39648023)
chr7 (134-186)||(9151410-9151463)
chr7 (159-195)||(31299502-31299538)
chr7 (159-187)||(47573329-47573357)
[»] scaffold0051 (2 HSPs)
scaffold0051 (86-183)||(61656-61754)
scaffold0051 (143-185)||(55560-55603)
[»] scaffold0249 (1 HSPs)
scaffold0249 (86-185)||(24917-25016)
[»] chr4 (35 HSPs)
chr4 (86-184)||(26870028-26870127)
chr4 (86-184)||(15650485-15650582)
chr4 (86-183)||(3839095-3839193)
chr4 (40-118)||(10259391-10259469)
chr4 (40-118)||(24077460-24077538)
chr4 (40-118)||(26924330-26924408)
chr4 (40-118)||(43332507-43332585)
chr4 (40-118)||(51452574-51452652)
chr4 (65-184)||(23992319-23992439)
chr4 (72-185)||(19591009-19591124)
chr4 (40-118)||(21564986-21565064)
chr4 (54-152)||(28120217-28120315)
chr4 (28-82)||(33486445-33486499)
chr4 (134-183)||(43014591-43014641)
chr4 (28-82)||(43014655-43014709)
chr4 (67-183)||(1975318-1975435)
chr4 (72-183)||(56541695-56541807)
chr4 (102-187)||(29706146-29706233)
chr4 (134-183)||(16895941-16895991)
chr4 (140-185)||(17741660-17741706)
chr4 (64-158)||(49711650-49711744)
chr4 (143-186)||(23479824-23479868)
chr4 (143-186)||(35707655-35707699)
chr4 (143-184)||(2118191-2118233)
chr4 (143-184)||(5759342-5759384)
chr4 (143-188)||(29713824-29713870)
chr4 (134-183)||(39713496-39713546)
chr4 (143-183)||(574177-574218)
chr4 (143-187)||(2777222-2777267)
chr4 (143-183)||(3759280-3759321)
chr4 (143-183)||(12680630-12680671)
chr4 (28-69)||(16895888-16895929)
chr4 (159-187)||(27892640-27892668)
chr4 (143-186)||(37352101-37352145)
chr4 (143-186)||(37357000-37357044)
[»] scaffold0440 (1 HSPs)
scaffold0440 (77-177)||(8320-8421)
[»] scaffold0499 (1 HSPs)
scaffold0499 (66-158)||(10672-10764)
[»] scaffold0073 (1 HSPs)
scaffold0073 (64-158)||(33414-33508)
[»] scaffold0376 (1 HSPs)
scaffold0376 (86-184)||(10783-10879)
[»] scaffold0069 (1 HSPs)
scaffold0069 (125-185)||(14630-14691)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-181)||(151883-151931)
[»] scaffold0057 (1 HSPs)
scaffold0057 (134-184)||(17400-17451)
[»] scaffold0027 (1 HSPs)
scaffold0027 (143-184)||(143213-143255)
[»] scaffold0484 (1 HSPs)
scaffold0484 (147-186)||(8173-8213)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 8e-57; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 6093299 - 6093141
Alignment:
Q  29 tttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaac 128  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6093299 tttcatgaatcaagacttgatagagctttcataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaac 6093200  T
Q  129 aaaacttttacaagatacgttattcaactctgcgaagcacgggtttgtaactagtttaaaccaaaaatat 198  Q
    ||||||||||||||           ||| || |||||||||||||||||||||||||| |||||||||||    
T  6093199 aaaacttttacaag-----------aaccctacgaagcacgggtttgtaactagtttacaccaaaaatat 6093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 44186998 - 44186859
Alignment:
Q  45 ttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagat 144  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| | ||||||||| |    
T  44186998 ttgatagagctttggtaaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcctatttttcgtttggaacaatatttttacaagtt 44186899  T
Q  145 acgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  44186898 acgttattgaactcgtgcgaagcacgggtttgtaactagt 44186859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 30766391 - 30766547
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaa 127  Q
    ||||||| |||||||| ||| ||  |||||| ||||||||||| |||| ||||||||||||| || ||||| | ||||||| |||||||||  ||| |||    
T  30766391 ttttcatcaatcaagacttggtaaggctttggtaaatattttgataaatatttctaatgtttatgtaatattccttaatttacttatttttcctttggaa 30766490  T
Q  128 caaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||   ||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  30766491 caattgttttacaagatacgttattcaacccgtgcgaagcacaggtttgtaactagt 30766547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 44072852 - 44072773
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttatttttt 119  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| |||||||    
T  44072852 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctaatttttt 44072773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 918794 - 918865
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgct 111  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  918794 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgct 918865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 22759174 - 22759056
Alignment:
Q  66 ttttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaa 164  Q
    ||||| |||| |||||||||||||||||||||| | ||||||||| |||||||  |||  |||||   |||||||| ||| ||| |||||| | ||||||    
T  22759174 ttttgataaatatttctaatgtttgtgcaatattccttaatttgc-tatttttcctttgaaacaatttttttacaaaatatgttcttcaacccgtgcgaa 22759076  T
Q  165 gcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||    
T  22759075 gcacgggtttgtaactagtt 22759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 35437198 - 35437269
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaact 157  Q
    ||||||||||||| |||||||||||| ||||||| ||| |||||||  |||||||| |||||||||||||||    
T  35437198 gtttgtgcaatattcattaatttgctcattttttctttggaacaaattttttacaatatacgttattcaact 35437269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 26035911 - 26035813
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||  ||||||||||  ||||||| ||| ||| |||  ||||||||||||| ||||||||| | ||||| ||||||||||||||||||||    
T  26035911 gtttgtgcaatatttattaatttgcacatttttttttt-gaaaaaatattttacaagatacattattcaacccgtgcgacgcacgggtttgtaactagtt 26035813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 188727 - 188777
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  188727 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagt 188777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 36164927 - 36164857
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaac 156  Q
    |||||||||||||  |||||||| || ||||||| ||||||||||   |||||||||||||||||||||||    
T  36164927 gtttgtgcaatattaattaatttactcattttttctttagaacaatttttttacaagatacgttattcaac 36164857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 5240947 - 5241031
Alignment:
Q  102 ttaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||||||  |||||||  ||||||||||   |||||||| | |||||||||||| | |||||||||||||||||||||||||||    
T  5240947 ttaatttgaatatttttcctttagaacaatttttttacaaaacacgttattcaacccgtgcgaagcacgggtttgtaactagttt 5241031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 15315324 - 15315269
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaa-gcacgggtttgtaactagtttaa 187  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  15315324 ttttacaagatacgttattcaacccgtgcgaaagcacgggtttgtaactagtttaa 15315269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 188659 - 188713
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| |||| |||| ||||||||||||||||| ||||||    
T  188659 ttttcatgaatcaagacttggtagaactttcataaatattttggtaaatatttct 188713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 37611513 - 37611459
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||| ||||||    
T  37611513 ttttcatgaatcaagacttggtagagctttcataaatattttgataaatatttct 37611459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 39576525 - 39576575
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  39576525 ttttacagaatacgttattcaactcgtgcgaagcacgggtttgtaactagt 39576575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 54792789 - 54792723
Alignment:
Q  87 tttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattc 153  Q
    |||||||||||| |||||||||||| ||||||  ||| ||||||   ||||||||||||||||||||    
T  54792789 tttgtgcaatattcattaatttgctcatttttcctttggaacaatttttttacaagatacgttattc 54792723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 8396757 - 8396809
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  8396757 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 8396809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 12157807 - 12157707
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| ||||||| |||||||||||| ||||||  ||| ||||||   ||||||| ||||||  ||||||| | ||||||| |||| |||||||||||||    
T  12157807 gtttgagcaatattcattaatttgctcatttttcctttggaacaatttttttacaggatacgaaattcaacccgtgcgaagtacggatttgtaactagtt 12157708  T
Q  185 t 185  Q
    |    
T  12157707 t 12157707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 16496368 - 16496416
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaacta 181  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||    
T  16496368 ttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaacta 16496416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 22477906 - 22477949
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  22477906 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 22477949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 4137441 - 4137399
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  4137441 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 4137399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 18688674 - 18688716
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  18688674 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 18688716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 35861002 - 35861044
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  35861002 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 35861044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 52843176 - 52843226
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||| || |||| ||||||||||| |||||||||||||||||||||||||    
T  52843176 ttttaaaaaatacattattcaactcgtgcgaagcacgggtttgtaactagt 52843226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 19360776 - 19360735
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  19360776 atacgttattcaactcatgcgaagcacgggtttgtaattagt 19360735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 50742296 - 50742340
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||    
T  50742296 atacgttattgaacccgtgcgaagcacgggtttgtaactagttta 50742340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 4e-43; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 32726149 - 32725990
Alignment:
Q  25 cctttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgttta 124  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||     
T  32726149 cctttttcatgaatcaagacttgatagagctttcgtaaatattttggtaaaaatttctaatgtttatgcaatatccattaatttgcctattttc-gtttg 32726051  T
Q  125 gaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
     || || | ||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  32726050 taataatatttttacaagatacgttattgaacccatgcgaagcacgggtttataactagtt 32725990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 24278962 - 24279062
Alignment:
Q  52 agctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttat 151  Q
    |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||  ||  ||||||   ||||||||||||| ||||    
T  24278962 agctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttccttcggaacaatttttttacaagatacattat 24279061  T
Q  152 t 152  Q
    |    
T  24279062 t 24279062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 35357755 - 35357671
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgttta 124  Q
    |||| |||||| |||||| |||||||||||| |||| |||| |||||||||| |||||| |||||||||||| ||||||| ||||    
T  35357755 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtacaatattcattaatttgctcatttttttttta 35357671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 3711054 - 3711132
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    ||||||||||| |  ||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  3711054 aagatttgataaatttttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 3711132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 11866362 - 11866284
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| || ||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  11866362 aagacttgataaagttttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 11866284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 7364771 - 7364823
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7364771 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 7364823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 30922167 - 30922096
Alignment:
Q  115 tttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| |||||||||||  ||||||||||||||| ||||||| | || ||||||||||||||||||||||||    
T  30922167 tttttctttagaacaaattttttacaagatacgtaattcaacccgtgtgaagcacgggtttgtaactagttt 30922096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 1691535 - 1691425
Alignment:
Q  77 atttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaa-aacttttacaagatacgttattcaactc-tgcgaagcacgggttt 174  Q
    |||||||||||||||||||||| | |||||||||| ||||||| |||  || ||    |||||||| ||| ||| |||||| | ||||||||||||||||    
T  1691535 atttctaatgtttgtgcaatattccttaatttgctcattttttctttgaaataattttttttacaaaatatgttcttcaacccgtgcgaagcacgggttt 1691436  T
Q  175 gtaactagttt 185  Q
    |||||||||||    
T  1691435 gtaactagttt 1691425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 17026060 - 17026158
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| |||| |  |||  ||||||  |||||||||||| |||||||||| | |||   ||||||||||||||||||||    
T  17026060 gtttgtgcaatattcattaatttgctnatttctcctttgnaacaaattttttacaagatatgttattcaacccgtgc-tcgcacgggtttgtaactagtt 17026158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 25124141 - 25124044
Alignment:
Q  87 tttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||| | ||||||| || ||||||  |||  |||||   |||||||||||| || ||||||| | |||||||||||||||||||||||||    
T  25124141 tttgtgcaatattccttaatttactcatttttcctttgaaacaatttttttacaagatatgtaattcaacccgtgcgaagcacgggtttgtaactagt 25124044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 4289078 - 4289027
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| || |||||||||||||| | ||||||||||||||||||||||||||    
T  4289078 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 4289027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 10821070 - 10820973
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||| |||||| ||||||||||||  |||||| ||| |||||||  ||||| ||| ||||||||||||| | ||||||||||   ||||||||||||    
T  10821070 gtttgttcaatattcattaatttgctcttttttttttt-gaacaaattttttataagttacgttattcaacccgtgcgaagcacaaatttgtaactagt 10820973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 16723703 - 16723661
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  16723703 atacgttattgaactcgtgcgaagcacgggtttgtaactagtt 16723661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 17092245 - 17092315
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaac 156  Q
    ||||||||||||| |||||| ||||| |||| |  ||| |||||||  |||||||||||| ||||||||||    
T  17092245 gtttgtgcaatattcattaaattgctcatttctcctttggaacaaattttttacaagatatgttattcaac 17092315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 9916748 - 9916707
Alignment:
Q  143 atacgttattcaac-tctgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  9916748 atacgttattcaacctgtgcgaagcacgggtttgtaactagt 9916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 14753577 - 14753645
Alignment:
Q  87 tttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaac 156  Q
    |||||||||||| ||||||||||| |||||||| ||||||| |||  ||||| |||||| ||| ||||||    
T  14753577 tttgtgcaatattcattaatttgc-tattttttctttagaataaattttttataagatatgttgttcaac 14753645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 28609953 - 28609998
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||    
T  28609953 atacgttattcaacccgtgcaaagcacgggtttgtaactagtttaa 28609998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 7364717 - 7364757
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattt 68  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  7364717 ttttcatgaatcaagacttggtagagctttggtaaatattt 7364757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 22374132 - 22374080
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgc-gaagcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||| |||||    
T  22374132 ttttacaagatacgttattcaacccgtgctgaagcacgggtttgtaagtagtt 22374080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 27272620 - 27272728
Alignment:
Q  77 atttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttg 175  Q
    |||||||||||||||||||||| | |||||||||| |||||| ||||||||||||  | ||||||||||||||||||||| | |||||||||||||||||    
T  27272620 atttctaatgtttgtgcaatattctttaatttgctcatttttcgtttagaacaaatttattacaagatacgttattcaacccgtgcgaagcacgggtttg 27272719  T
Q  176 taactagtt 184  Q
    |||||||||    
T  27272720 taactagtt 27272728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 12661114 - 12660957
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaa 127  Q
    |||||||||||||||| |||  |  ||||| |||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||    ||  ||    
T  12661114 ttttcatgaatcaagacttggaaaggctttcataaatatttggataaatatttctaatgtttgtgcaatattcattaatttgcttattttcatcttgaaa 12661015  T
Q  128 caaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
     ||   ||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  12661014 taatttttttacaagatacgttatttaacccatgcgaagcacgggtttgtaactagtt 12660957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 12250010 - 12249910
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  12250010 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 12249911  T
Q  185 t 185  Q
    |    
T  12249910 t 12249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 23626154 - 23626054
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  23626154 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 23626055  T
Q  185 t 185  Q
    |    
T  23626054 t 23626054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 39445197 - 39445297
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  39445197 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 39445296  T
Q  185 t 185  Q
    |    
T  39445297 t 39445297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 41907954 - 41908053
Alignment:
Q  87 tttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||| |||||||||||| ||||||| |||||||||||  ||||| ||||||  ||||||||| | |||||||||||||||||||||||||||    
T  41907954 tttgtgcaatattcattaatttgctcattttttctttagaacaaattttttataagatatattattcaacccgtgcgaagcacgggtttgtaactagttt 41908053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 44213180 - 44213034
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttac 139  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||  |||| || |    |||||     
T  44213180 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaatattttttttat 44213081  T
Q  140 aagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    || |||||||||| ||| | ||| | |||||||||||||||||||||    
T  44213080 aaaatacgttattaaacccgtgcaacgcacgggtttgtaactagttt 44213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 2961105 - 2961008
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||| |||||| |||||||||||  ||||||| ||  |||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  2961105 gtttgttcaatattcattaatttgcacattttttttt--gaacaaattttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 2961008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 20663063 - 20662985
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  20663063 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 20662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 30548426 - 30548348
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||| | ||||||    
T  30548426 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgatcattttt 30548348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 11697032 - 11697086
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||| ||||||    
T  11697032 ttttcatgaatcaagacttggtagagctttcataaatattttgataaatatttct 11697086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 11697101 - 11697151
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  11697101 ttttacaagatacgttattcaacccgtgcaaagcacgggtttgtaactagt 11697151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 32569656 - 32569575
Alignment:
Q  105 atttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||||| ||||||  ||||||||||   ||||| || |||||| ||||||| | |||||||||||||||||||||||||||    
T  32569656 atttgctcatttttcctttagaacaatcattttagaaaatacgtaattcaacccgtgcgaagcacgggtttgtaactagttt 32569575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 39204807 - 39204908
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttg-tttagaacaaaacttttacaagatacgttattcaac-tctgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||  |||||||| || |||||||  ||| |||| ||  ||||| |||||| |||||||||| | ||| |||||||||||||||||||||    
T  39204807 gtttgtgcaatatttattaatttactcatttttttctttggaactaattttttataagataagttattcaacctgtgcaaagcacgggtttgtaactagt 39204906  T
Q  184 tt 185  Q
    ||    
T  39204907 tt 39204908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 18375608 - 18375557
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| || |||||||||||||| | ||||||||||||||||||||||||||    
T  18375608 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 18375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 24055841 - 24055884
Alignment:
Q  143 atacgttattcaac-tctgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  24055841 atacgttattcaacctgtgcgaagcacgggtttgtaactagttt 24055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 41158635 - 41158686
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| || |||||||||||||| | ||||||||||||||||||||||||||    
T  41158635 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 41158686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 4634942 - 4634853
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||||||||||||| | ||| || |||||| |||||||||| | |||| ||   || |||||||||||||| |||||||||||| ||||||    
T  4634942 ttttcatgaatcaatacttggtaaagctttcataaatattt-gataaagataaatagtgtttgtgcaatattcattaatttgctcattttt 4634853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 8307590 - 8307504
Alignment:
Q  102 ttaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||| ||||||| |||  |||||   ||||| || |||| ||||||||| | |||||||||||||||||||| ||||||||    
T  8307590 ttaatttgctcattttttctttgtaacaattattttagaaaatacattattcaacacgtgcgaagcacgggtttgtaattagtttaa 8307504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 36778480 - 36778522
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  36778480 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 36778522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 40586484 - 40586443
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  40586484 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 40586443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 7391324 - 7391364
Alignment:
Q  145 acgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  7391324 acgttattcaacccgtgcgaagcacgggtttgtaactagtt 7391364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 8160461 - 8160417
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||    
T  8160461 atacgttattcaacccgtgcaaagcacgggtttgtaactagttta 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 8763013 - 8763057
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||    
T  8763013 atacgttattcaacccgtgcaaagcacgggtttgtaactagttta 8763057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 21543180 - 21543247
Alignment:
Q  88 ttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaac 156  Q
    |||||||||||||||||||||||| ||||||  |||  |||||   ||||| |||||||||||||||||    
T  21543180 ttgtgcaatatccattaatttgctcatttttcttttgaaacaatt-ttttataagatacgttattcaac 21543247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 27273878 - 27273922
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||    
T  27273878 atacgttattgaacccgtgcgaagcacgggtttgtaactagttta 27273922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 2366996 - 2366839
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaa 127  Q
    ||||||||||||||||  |||||  |||||| ||||||||||| ||||  |||||||| |||||||||||| | |||||||||| ||||||  |||||||    
T  2366996 ttttcatgaatcaagacctgataaggctttgttaaatattttgataaatctttctaatatttgtgcaatattccttaatttgctcatttttcctttagaa 2366897  T
Q  128 caaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
     ||   ||||||||||||||||||||||| | |||||| ||| |||||||||||||||    
T  2366896 taatttttttacaagatacgttattcaacccgtgcgaaacacaggtttgtaactagtt 2366839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 9702652 - 9702751
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  9702652 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 9702751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 19365869 - 19365984
Alignment:
Q  67 tttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaag 165  Q
    |||| |||| |||| ||||||||||||||||| | |||||||||| ||||||| |||| ||||    ||||||||||||||||||||||| | |||||||    
T  19365869 tttgataaatatttataatgtttgtgcaatattccttaatttgctcattttttctttaaaacattttttttacaagatacgttattcaacccatgcgaag 19365968  T
Q  166 cacgggtttgtaacta 181  Q
    ||||||||||||||||    
T  19365969 cacgggtttgtaacta 19365984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 9809918 - 9809820
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||  ||||||| ||| |||||||  ||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  9809918 gtttgtgcaatattcattaatttgcacatttttttttt-gaacaaattttttacaagatacattattcaacccgtgcgaagcacgggtttgtaactagtt 9809820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 12702158 - 12702061
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||| |||||||||||  ||||||| ||| |||||||  ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  12702158 gtttgtgcaatattcattaatttgcacatttttttttt-gaacaaattttttacaagatacattattcaacccgtgcgaagcacgggtttgtaactagt 12702061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 32977209 - 32977100
Alignment:
Q  77 atttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttg 175  Q
    ||||||||||||||||||||||   ||||||| || ||||||| |||  |||||   ||||||||||||||||||||||| | |||||||||| ||||||    
T  32977209 atttctaatgtttgtgcaatatttcttaatttactcattttttctttgaaacaatttttttacaagatacgttattcaacccgtgcgaagcaccggtttg 32977110  T
Q  176 taactagttt 185  Q
    ||||||||||    
T  32977109 taactagttt 32977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 7863624 - 7863528
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||  | ||||| ||| |||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  7863624 gtttgtgcaatattcattaatttgc--acttttttttt-gaacaaattttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 7863528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 18037353 - 18037229
Alignment:
Q  62 aatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttat-tcaactc-t 159  Q
    ||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||  |  |||||||   ||||||| |||||||||| ||||| | |    
T  18037353 aatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcctcaagaacaatttttttacatgatacgttatctcaacccgt 18037254  T
Q  160 gcgaagcacgggtttgtaactagtt 184  Q
    |||||||||| ||||||||||||||    
T  18037253 gcgaagcacgagtttgtaactagtt 18037229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 36366175 - 36366123
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  36366175 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 36366123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 12763174 - 12763092
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcac 168  Q
    ||||||||||||| |||||||||||  ||||||| ||| |||||||  ||||||||||||||||||||||| | ||||||||||    
T  12763174 gtttgtgcaatattcattaatttgcacatttttttttt-gaacaaattttttacaagatacgttattcaacccgtgcgaagcac 12763092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 22602685 - 22602634
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  22602685 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 22602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 38041609 - 38041490
Alignment:
Q  67 tttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaa-aacttttacaagatacgttattcaactc-tgcgaa 164  Q
    |||| |||| ||||||||| |||||||||||| | |||||||||| ||||||| |||  |||||    |||||||| ||| ||| |||||| | ||||||    
T  38041609 tttgataaatatttctaatatttgtgcaatattccttaatttgctcattttttctttgaaacaactttttttacaaaatatgttcttcaacccgtgcgaa 38041510  T
Q  165 gcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||    
T  38041509 gcacgggtttgtaactagtt 38041490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 22602753 - 22602699
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  22602753 ttttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 22602699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 37464476 - 37464554
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| || ||| |||||||||||| |||| |||| |||| |||||||||||| |||||||||||| ||||||    
T  37464476 aagacttgataaagttttcataaatattttgataaagatttataatttttgtgcaatattcattaatttgctcattttt 37464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 42819380 - 42819330
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  42819380 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagt 42819330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 36366243 - 36366189
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| || |||||| ||||||||||||||||| ||||||    
T  36366243 ttttcatgaatcaagacttggtaaagctttcataaatattttggtaaatatttct 36366189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 8350241 - 8350292
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||||| | | |||||||||||||| |||||||||    
T  8350241 ttttacaagatacgttattcaacccgtacgaagcacgggtttataactagtt 8350292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 34719449 - 34719500
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| || |||||||||||||| | ||||||||||||||||||||||||||    
T  34719449 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 34719500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 25695589 - 25695539
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||| || |||||||||||||| | |||||||||||||||||||||||||    
T  25695589 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagt 25695539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 3086474 - 3086433
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  3086474 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 3086433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 752097 - 752053
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||    
T  752097 atacgttattcaacccgtgcaaagcacgggtttgtaactagttta 752053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 13596910 - 13596962
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| || |||||| ||||||| | |||||||||||||||||||||||||||    
T  13596910 ttttaaaaaatacgtaattcaacccgtgcgaagcacgggtttgtaactagttt 13596962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 9e-26; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 1932283 - 1932382
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||| ||| |||||||  |||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  1932283 gtttgtgcaatattcattaatttgctcattttttctttggaacaaattttttacaagatacgatattcaacccgtgcgaagcacgggtttgtaactagtt 1932382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 2624879 - 2624721
Alignment:
Q  27 tttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttaga 126  Q
    |||||||| |||||||| ||| ||  ||||| |||||||||||| |||| |||| ||||||||||||||| |   ||||||| || ||||||  |||  |    
T  2624879 tttttcataaatcaagacttggtaaggctttcataaatattttgataaatatttttaatgtttgtgcaatttttcttaattttctcatttttcctttgaa 2624780  T
Q  127 acaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||   ||||||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  2624779 acaatttttttacaagatacgttattcaacccgtgcgatgcacgggtttgtaactagtt 2624721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 33318995 - 33319092
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||  | ||||| ||| |||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  33318995 gtttgtgcaatattcattaatttgc--acttttttttt-gaacaaattttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 33319091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 4425851 - 4425951
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||| ||   ||||||||||||||||| ||||| | |||||| |||||||||||||||||||    
T  4425851 gtttgtgcaatattcattaatttgctcattttttctttggaataatttttttacaagatacgttagtcaacccgtgcgaaacacgggtttgtaactagtt 4425950  T
Q  185 t 185  Q
    |    
T  4425951 t 4425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 22975848 - 22975720
Alignment:
Q  54 ctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattc 153  Q
    |||| |||||||||||| |||| |||| ||||||||||||||| |   |||||||||| ||||||  ||| ||||||   ||||||||||||||||||||    
T  22975848 ctttcataaatattttgataaatatttttaatgtttgtgcaatttttcttaatttgctcatttttcctttggaacaatttttttacaagatacgttattc 22975749  T
Q  154 aactc-tgcgaagcacgggtttgtaacta 181  Q
    ||| | |||||||||| | ||||||||||    
T  22975748 aacccgtgcgaagcacagatttgtaacta 22975720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 23812553 - 23812681
Alignment:
Q  54 ctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattc 153  Q
    |||| |||||||||||| |||| |||| ||||||||||||||| |   |||||||||| ||||||  ||| ||||||   ||||||||||||||||||||    
T  23812553 ctttcataaatattttgataaatatttttaatgtttgtgcaatttttcttaatttgctcatttttcctttggaacaatttttttacaagatacgttattc 23812652  T
Q  154 aactc-tgcgaagcacgggtttgtaacta 181  Q
    ||| | |||||||||| | ||||||||||    
T  23812653 aacccgtgcgaagcacagatttgtaacta 23812681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 250020 - 250098
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  250020 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 250098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 12579922 - 12579844
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  12579922 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 12579844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 33979081 - 33979226
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaa-aactttta 138  Q
    |||| |||||| | |||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||  |||  || ||    |||||    
T  33979081 aagacttgataaaactttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttgaaataatttttttta 33979180  T
Q  139 caagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||| |||||||||| ||| | |||||| ||||||||||||||||||    
T  33979181 caaaatacgttattaaacccgtgcgaaacacgggtttgtaactagt 33979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 11272685 - 11272739
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  11272685 ttttcatgaatcaagatttggtagagctttcataaatattttggtaaatatttct 11272739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 33300597 - 33300710
Alignment:
Q  72 taaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgg 170  Q
    |||| |||||||||||||||| ||||| | ||||||| || ||||||  |||  ||||| | |||||||| ||||| |||||||| | ||||||| ||||    
T  33300597 taaatatttctaatgtttgtgaaatattccttaatttactcatttttcctttgaaacaatatttttacaatatacgatattcaacccgtgcgaagtacgg 33300696  T
Q  171 gtttgtaactagtt 184  Q
    ||||||||||||||    
T  33300697 gtttgtaactagtt 33300710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 18389218 - 18389166
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18389218 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 18389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 3052128 - 3052060
Alignment:
Q  62 aatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaa 130  Q
    ||||||||| |||| |||| |||| |||||||||||| |||||||||||| ||||||| || |||||||    
T  3052128 aatattttgataaagatttataatatttgtgcaatattcattaatttgctcattttttcttcagaacaa 3052060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 11470889 - 11470837
Alignment:
Q  30 ttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  11470889 ttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 11470837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 5753213 - 5753125
Alignment:
Q  94 aatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| |||||||||||| ||||||| |    ||||||  |||||||| |||||||||||||| | ||||||| |||||||||||||||||||    
T  5753213 aatattcattaatttgctcatttttttt----aacaaattttttacaatatacgttattcaacccgtgcgaagtacgggtttgtaactagttt 5753125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 8615029 - 8615112
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacggg 171  Q
    ||||||||||||| |||||||||||  | ||||| ||| |||||||  ||||||||||||||||||||||| | |||||||||||||    
T  8615029 gtttgtgcaatattcattaatttgc--acttttttttt-gaacaaattttttacaagatacgttattcaacccgtgcgaagcacggg 8615112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 11272753 - 11272804
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||||||||||    
T  11272753 ttttacaagatacattattcaactcgtgcgaagcacggatttgtaactagtt 11272804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 24447786 - 24447838
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  24447786 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 24447838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 6966278 - 6966235
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  6966278 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 6966235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 25540849 - 25540891
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  25540849 atacgttattgaactcgtgcgaagcacgggtttgtaactagtt 25540891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 4110061 - 4110102
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  4110061 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 4110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 18389272 - 18389232
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattt 68  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  18389272 ttttcatgaatcaagacttggtagagctttggtaaatattt 18389232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 33319616 - 33319564
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| || ||| |||||||||||| |||||||||||| ||||||||||||||    
T  33319616 ttttaaaaaatatgttattcaactcgtgcgaagcacggatttgtaactagttt 33319564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 35160114 - 35160166
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| || |||||||||||||| | |||||||||||| ||||||||||||||    
T  35160114 ttttaaaaaatacgttattcaacccgtgcgaagcacggatttgtaactagttt 35160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 28565528 - 28565425
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||   ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28565528 gtttgtgcaatattcattaatttgctcatttttcctttggaacaatttttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 28565429  T
Q  185 taaa 188  Q
    ||||    
T  28565428 taaa 28565425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 28631754 - 28631854
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  28631754 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 28631853  T
Q  185 t 185  Q
    |    
T  28631854 t 28631854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 23909824 - 23909713
Alignment:
Q  77 atttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaa-aacttttacaagatacgttattcaactc-tgcgaagcacgggttt 174  Q
    |||||||||||||||||||||| | |||||||||| ||||||| |||  |||||    |||||||| ||| ||| |||||| | ||||||||||||||||    
T  23909824 atttctaatgtttgtgcaatattccttaatttgctcattttttctttgaaacaattttttttacaaaatatgttcttcaacccgtgcgaagcacgggttt 23909725  T
Q  175 gtaactagttta 186  Q
    ||||||||||||    
T  23909724 gtaactagttta 23909713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 34265988 - 34265874
Alignment:
Q  72 taaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgg 170  Q
    |||| |||||||||||||||| ||||| | |||||||||| ||||||| |||  |||||   |||||||| ||||| |||||||| | |||||||||| |    
T  34265988 taaatatttctaatgtttgtgaaatattccttaatttgctcattttttctttgaaacaatttttttacaatatacgatattcaacccgtgcgaagcacag 34265889  T
Q  171 gtttgtaactagttt 185  Q
    |||||||| ||||||    
T  34265888 gtttgtaattagttt 34265874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 12714915 - 12714984
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaa 155  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||| | ||||||||||||||||||||||    
T  12714915 gtttgtgcaatattcattaatttgctcatttttcctttggaacaatatttttacaagatacgttattcaa 12714984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 15317589 - 15317659
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaac 156  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||   |||||||||||||||||||||||    
T  15317589 gtttgtgcaatattcattaatttgctcatttttcctttggaacaatttttttacaagatacgttattcaac 15317659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 20767479 - 20767533
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  20767479 ttttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 20767533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 26429241 - 26429187
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  26429241 ttttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 26429187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 43118896 - 43118977
Alignment:
Q  102 ttaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactctgcgaagcacgggtttgtaactagtt 184  Q
    |||||||| ||||||||  ||||||| ||   |||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  43118896 ttaatttgattatttttcctttagaataatttttttacaaaatatgttattcaac-ctgcgaagcacgggtttgtaactagtt 43118977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 1954462 - 1954373
Alignment:
Q  63 atattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttatt 152  Q
    |||||| | |||| ||||||||| |||||| ||||| |||||||||||| ||||||| ||| ||| ||   |||||||||||||||||||    
T  1954462 atatttggataaagatttctaatatttgtgtaatattcattaatttgctcattttttctttggaataatttttttacaagatacgttatt 1954373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 3929798 - 3929745
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  3929798 ttttataagatacgttattcaacccgtgcgaagcacgggtttgtaactagttta 3929745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 4893950 - 4894014
Alignment:
Q  125 gaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtttaaa 188  Q
    |||| ||| ||||| || |||||||||||||| | ||||||||||||||||||||||||||||||    
T  4893950 gaactaaatttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtttaaa 4894014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 29693366 - 29693431
Alignment:
Q  121 tttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||  ||||| || |||||| ||||||| | |||||||||||||||||||||||||||    
T  29693366 tttagaacaaattttttaaaaaatacgtaattcaacccgtgcgaagcacgggtttgtaactagttt 29693431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 42682592 - 42682637
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||||||| | |||||||||||||||||||||||||||||    
T  42682592 atacgttattcaacccgtgcgaagcacgggtttgtaactagtttaa 42682637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 13662169 - 13662121
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaacta 181  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||    
T  13662169 ttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaacta 13662121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 1375982 - 1376029
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtttaaac 189  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||    
T  1375982 atacgttattcaacccgtgcaaagcacgggtttgtaactagtttaaac 1376029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 3929867 - 3929812
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaata-ttttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| ||||||| |||||||||| ||||||    
T  3929867 ttttcatgaatcaagacttggtagagctttcataaatatttttggtaaatatttct 3929812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 9112131 - 9112234
Alignment:
Q  83 aatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaa-ctctgcgaagcacgggtttgtaacta 181  Q
    ||||||||||||||||  ||||||||||| ||||||  |||| |||||   ||||| |||||| |||||| || |  |||||| ||||| ||||||||||    
T  9112131 aatgtttgtgcaatatttattaatttgctcatttttcttttaaaacaatttttttataagatatgttatttaatccgtgcgaaacacggatttgtaacta 9112230  T
Q  182 gttt 185  Q
    ||||    
T  9112231 gttt 9112234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 10763588 - 10763631
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  10763588 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 10763631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 20767547 - 20767598
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| ||||||||||||||||  | ||||||||||||||||||||||||||    
T  20767547 ttttataagatacgttattcaagccgtgcgaagcacgggtttgtaactagtt 20767598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 29840731 - 29840689
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  29840731 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 29840689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 38896815 - 38896857
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  38896815 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 38896857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 46623418 - 46623376
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  46623418 atacgttattcaactcgtgcgaagcacgggattgtaactagtt 46623376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 29184537 - 29184476
Alignment:
Q  125 gaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||| ||| ||||| || |||||||||||||  | |||||||||||||||||||||||||||    
T  29184537 gaactaaatttttaaaaaatacgttattcaatccgtgcgaagcacgggtttgtaactagttt 29184476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 47137860 - 47137901
Alignment:
Q  144 tacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  47137860 tacgttattcaacccgtgcgaagcacgggtttgtaactagtt 47137901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 12933 - 13067
Alignment:
Q  53 gctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttatt 152  Q
    ||||| |||||||||||| |||| |||| ||||||||||||||| |   ||||||| || ||||||  ||| ||||||   |||||||||||||||||||    
T  12933 gctttcataaatattttgataaatatttttaatgtttgtgcaatttttcttaatttcctcatttttcctttggaacaatttttttacaagatacgttatt 13032  T
Q  153 caactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||| | ||||||||||||||||||||||||||||    
T  13033 caacccgtgcgaagcacgggtttgtaactagttta 13067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 52791 - 52690
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  52791 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 52692  T
Q  185 ta 186  Q
    ||    
T  52691 ta 52690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 42996884 - 42996984
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaa-ctctgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  42996884 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatatgttattcaacctgtgcgaagcacgggtttgtaactagtt 42996983  T
Q  185 t 185  Q
    |    
T  42996984 t 42996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 9226119 - 9226018
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||   |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  9226119 gtttgtgcaatattcattaatttgctcatttttcctttggaacaatttttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 9226020  T
Q  185 ta 186  Q
    ||    
T  9226019 ta 9226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 38434376 - 38434277
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||   |||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  38434376 gtttgtgcaatattcattaatttgctcatttttcctttggaacaatttttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 38434277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 19033791 - 19033713
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  19033791 aagacttgataaagctttcataaatattttgataaaaatttataatgtttgtgcaatattcattaatttgctcattttt 19033713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 20720845 - 20720923
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  20720845 aagacttgataaagctttcataaatattttgataaaaatttataatgtttgtgcaatattcattaatttgctcattttt 20720923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 42298926 - 42298807
Alignment:
Q  66 ttttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaa 164  Q
    ||||| |||| |||| ||||||||||||||||| | |||||| | | ||||||||||||||||||   ||||||||||||||||||||||| | ||  ||    
T  42298926 ttttgataaatatttataatgtttgtgcaatattccttaattagttcattttttgtttagaacaatttttttacaagatacgttattcaacccgtgtaaa 42298827  T
Q  165 gcacgggtttgtaactagtt 184  Q
     |||| ||||||||||||||    
T  42298826 acacgagtttgtaactagtt 42298807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 20765507 - 20765585
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  20765507 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 20765585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 23476705 - 23476587
Alignment:
Q  67 tttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaa-aacttttacaagatacgttattcaactc-tgcgaa 164  Q
    |||| |||| ||||||||||||||||||||||   |||||||||| ||||||  ||||||||||  | ||||| |||||| |||||||||| | || |||    
T  23476705 tttgataaatatttctaatgtttgtgcaatatttcttaatttgctcatttttcctttagaacaattatttttataagatatgttattcaacccgtgtgaa 23476606  T
Q  165 gcacgggtttgtaactagt 183  Q
    |||||||||||||||||||    
T  23476605 gcacgggtttgtaactagt 23476587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 29491085 - 29491163
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  29491085 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 29491163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 33230078 - 33230019
Alignment:
Q  59 ataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||||    
T  33230078 ataaatattttgataaagatttataatgtttgtgcaatattcattaatttgcttattttt 33230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 34282239 - 34282161
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| | |||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  34282239 aagacttgataaaactttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 34282161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 45121953 - 45122045
Alignment:
Q  66 ttttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc 158  Q
    ||||| |||| |||||||||||||||||| ||| | |||||||||| ||||||| ||| |||||||  |||| | | ||||||||||||||||    
T  45121953 ttttgataaatatttctaatgtttgtgcactattccttaatttgctcattttttctttggaacaaattttttccgaaatacgttattcaactc 45122045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 12960598 - 12960649
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  12960598 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 12960649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 12960530 - 12960582
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaattt 80  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  12960530 ttttcatgaatcaagacttggtagagctttcataaatattttggtaaatattt 12960582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 27840505 - 27840556
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  27840505 ttttacaagatacgttattcaacccgtgcaaagcacgggtttgtaactagtt 27840556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 27840437 - 27840491
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||| ||||||    
T  27840437 ttttcatgaatcaagacttggtagagctttcataaatattttgataaatatttct 27840491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 39278229 - 39278283
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtttaa 187  Q
    ||||| || |||||||||||||| | |||||||||||||||||||||||||||||    
T  39278229 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtttaa 39278283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 17817710 - 17817763
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||| | |||||||||||| | ||||||||||||||||||||||||||||    
T  17817710 ttttacaaaacacgttattcaacccgtgcgaagcacgggtttgtaactagttta 17817763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 21669282 - 21669230
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  21669282 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 21669230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 31896873 - 31896813
Alignment:
Q  125 gaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||| ||| ||||| || |||||||||||||| | ||||||||||||||||||||||||||    
T  31896873 gaactaaatttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 31896813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 691289 - 691332
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  691289 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 1484767 - 1484849
Alignment:
Q  103 taatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||| ||||||  ||||||||||   |||||||| ||| |||||| ||| | ||||||||||||||||||||| ||||    
T  1484767 taatttgctcatttttcctttagaacaattattttacaaaatatgttattaaacccgtgcgaagcacgggtttgtaaccagtt 1484849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 8998425 - 8998519
Alignment:
Q  64 tattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc 158  Q
    ||||||| |||| ||||||||||||| |||| ||| | |||||||||| ||||||  ||| ||||||   |||| | | ||||||||||||||||    
T  8998425 tattttgataaatatttctaatgtttttgcactattccttaatttgctcatttttcctttggaacaattttttttcgaaatacgttattcaactc 8998519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 39648023 - 39647981
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  39648023 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 39647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 9151410 - 9151463
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    ||||| || |||||||||||||| | ||||||||||||||||||||||| ||||    
T  9151410 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactaattta 9151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 31299502 - 31299538
Alignment:
Q  159 tgcgaagcacgggtttgtaactagtttaaaccaaaaa 195  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  31299502 tgcgaatcacgggtttgtaactagtttataccaaaaa 31299538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 47573357 - 47573329
Alignment:
Q  159 tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||||||||||||||||||||||    
T  47573357 tgcgaagcacgggtttgtaactagtttaa 47573329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 61656 - 61754
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  61656 gtttgtgcaatattcattaatttgctcatttttcctttggaacaaattttttacaagatacgatattcaacccgtgcgaagcacgggtttgtaactagt 61754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 55560 - 55603
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  55560 atacgttattcaactcgtgcgaagcacgggtttgtaactagttt 55603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 25016 - 24917
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||   |||||| ||| |||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  25016 gtttgtgcaatattcattaatttgcacttttttttttt-gaacaaattttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 24918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 26870127 - 26870028
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||  |||||||||||| |||||||||| | ||| ||||||||||||||||||||||    
T  26870127 gtttgtgcaatattcattaatttgctcatttttccttttgaacaaattttttacaagatatgttattcaacccgtgcaaagcacgggtttgtaactagtt 26870028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 15650582 - 15650485
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||| |||||| |||||||||||  ||||||| ||  |||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  15650582 gtttgttcaatattcattaatttgcacattttttttt--gaacaaattttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 15650485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 3839193 - 3839095
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||  ||||||||| | ||||||| ||  ||||||   ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  3839193 gtttgtgcaatatttattaatttgttcattttttcttaggaacaatttttttacaagatacgttattcaacccttgcgaagcacgggtttgtaactagt 3839095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 10259469 - 10259391
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  10259469 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 10259391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 24077538 - 24077460
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  24077538 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 24077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 26924408 - 26924330
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  26924408 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 26924330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 43332507 - 43332585
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  43332507 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 43332585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 51452574 - 51452652
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| |||||| |||||||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||||    
T  51452574 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcattttt 51452652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 23992439 - 23992319
Alignment:
Q  65 attttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcga 163  Q
    |||||| |||| ||||  |||||||||||||||| || ||||||||| ||||||  ||| |||||||  ||||| | ||||||||||||||| | |||||    
T  23992439 attttgataaatatttaaaatgtttgtgcaatattcagtaatttgctcatttttcctttggaacaaattttttaaacgatacgttattcaacccgtgcga 23992340  T
Q  164 agcacgggtttgtaactagtt 184  Q
    | ||| |||||||||||||||    
T  23992339 aacacaggtttgtaactagtt 23992319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 19591009 - 19591124
Alignment:
Q  72 taaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaactttt-acaagatacgttattcaactc-tgcgaagcacg 169  Q
    |||| |||| ||||||||||||||||| |||||||||||| ||||||  |||  || |    |||| ||||||||||||||| ||| | |||||||||||    
T  19591009 taaatatttataatgtttgtgcaatattcattaatttgctcatttttcctttgaaatatttttttttacaagatacgttattaaacccgtgcgaagcacg 19591108  T
Q  170 ggtttgtaactagttt 185  Q
    ||||||||||||||||    
T  19591109 ggtttgtaactagttt 19591124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 21564986 - 21565064
Alignment:
Q  40 aagatttgatagagctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttt 118  Q
    |||| |||||| | |||| |||||||||||| |||| |||| |||||||| |||||||| |||||||||||| ||||||    
T  21564986 aagacttgataaaactttcataaatattttgataaagatttataatgtttatgcaatattcattaatttgctcattttt 21565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 28120315 - 28120217
Alignment:
Q  54 ctttgataaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttatt 152  Q
    |||| ||||||||| || |||| |||| ||||||||||||||||| ||||||||| || ||||||  ||| ||||||   |||| ||||||||||||||    
T  28120315 ctttcataaatattctgataaagatttataatgtttgtgcaatattcattaatttactcatttttcctttggaacaattttttttcaagatacgttatt 28120217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 33486499 - 33486445
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  33486499 ttttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 33486445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 43014641 - 43014591
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  43014641 ttttacaagatacgttattcaacccgtgcgaagcacgggtttgtaactagt 43014591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 43014709 - 43014655
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatattttggtaaaaatttct 82  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  43014709 ttttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 43014655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 183
Target Start/End: Original strand, 1975318 - 1975435
Alignment:
Q  67 tttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaag 165  Q
    |||| |||| ||||||||| |||||||||||| | |||||||||| ||||||  |||  |||||   |||| ||||||| || ||||||| | |||||||    
T  1975318 tttgataaatatttctaatatttgtgcaatattccttaatttgctcatttttcctttgaaacaatttttttgcaagatatgtaattcaacccgtgcgaag 1975417  T
Q  166 cacgggtttgtaactagt 183  Q
    || |||||||||||||||    
T  1975418 catgggtttgtaactagt 1975435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 56541695 - 56541807
Alignment:
Q  72 taaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgg 170  Q
    |||| |||||||||||||||||||  |   |||||||||||||||||  |||  || ||   |||||| |||||||||||||||| | |||||||||| |    
T  56541695 taaatatttctaatgtttgtgcaacttttcttaatttgcttatttttcctttgaaataatttttttacgagatacgttattcaacccgtgcgaagcacag 56541794  T
Q  171 gtttgtaactagt 183  Q
    |||||||||||||    
T  56541795 gtttgtaactagt 56541807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 29706233 - 29706146
Alignment:
Q  102 ttaatttgcttattttttgtttagaacaaaactttt-acaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||| ||||||  ||||||||||   |||| ||||||||||||||||||  | |||||||||||||||| ||||||||||||    
T  29706233 ttaatttgctcatttttcttttagaacaattttttttacaagatacgttattcaatccgtgcgaagcacgggtttataactagtttaa 29706146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 16895941 - 16895991
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  16895941 ttttacaagatacgttattcaacccgtgcgaagcatgggtttgtaactagt 16895991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 17741660 - 17741706
Alignment:
Q  140 aagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  17741660 aagatacgttattcaactcatgcgaaacacgggtttgtaactagttt 17741706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 49711744 - 49711650
Alignment:
Q  64 tattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc 158  Q
    ||||||| |||| |||||||||||||||||| ||| | |||||||||| ||||||  ||| |||||||  ||||   | ||||||||||||||||    
T  49711744 tattttgataaatatttctaatgtttgtgcactattccttaatttgctcatttttcctttggaacaaattttttctgaaatacgttattcaactc 49711650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 23479824 - 23479868
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  23479824 atacgttattgaactcgtgcgaagcacgggtttgtaactagttta 23479868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 35707699 - 35707655
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  35707699 atacgttattcaacccgtgcgaagcacgggtttgtaactagttta 35707655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 2118191 - 2118233
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  2118191 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 2118233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 5759342 - 5759384
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  5759342 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 5759384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 29713824 - 29713870
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtttaaa 188  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||    
T  29713824 atacgttattcaacccgtgcaaagcacgggtttgtaactagtttaaa 29713870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 39713546 - 39713496
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    ||||| || |||||||||||||| | |||||||||||||||||||||||||    
T  39713546 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagt 39713496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 574218 - 574177
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  574218 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 574177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 2777222 - 2777267
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||    
T  2777222 atacgttattgaacccgtgcgaagcacgggtttgtaactagtttaa 2777267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 3759280 - 3759321
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  3759280 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 3759321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 12680671 - 12680630
Alignment:
Q  143 atacgttattcaactc-tgcgaagcacgggtttgtaactagt 183  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  12680671 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 12680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 16895888 - 16895929
Alignment:
Q  28 ttttcatgaatcaagatttgatagagctttgataaatatttt 69  Q
    |||||||||||||||| ||| ||||||||| |||||||||||    
T  16895888 ttttcatgaatcaagacttggtagagctttcataaatatttt 16895929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 27892668 - 27892640
Alignment:
Q  159 tgcgaagcacgggtttgtaactagtttaa 187  Q
    |||||||||||||||||||||||||||||    
T  27892668 tgcgaagcacgggtttgtaactagtttaa 27892640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 37352101 - 37352145
Alignment:
Q  143 atacgttattcaac-tctgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||    
T  37352101 atacgttattcaacctgtgcaaagcacgggtttgtaactagttta 37352145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 37357000 - 37357044
Alignment:
Q  143 atacgttattcaac-tctgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||    
T  37357000 atacgttattcaacctgtgcaaagcacgggtttgtaactagttta 37357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 8421 - 8320
Alignment:
Q  77 atttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttg 175  Q
    |||||||||||||||||||||| |||||||||||| ||||||  ||| ||||||   |||||||||||| |||||||||| | |||||||||||||| ||    
T  8421 atttctaatgtttgtgcaatattcattaatttgctcatttttcctttggaacaatttttttacaagatatgttattcaacacgtgcgaagcacgggtctg 8322  T
Q  176 ta 177  Q
    ||    
T  8321 ta 8320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 10764 - 10672
Alignment:
Q  66 ttttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc 158  Q
    ||||| |||| |||||||||||||||||| ||| | |||||||||| ||||||  ||| |||||||  |||| | | ||||||||||||||||    
T  10764 ttttgataaatatttctaatgtttgtgcactattccttaatttgctcatttttcctttggaacaaattttttccgaaatacgttattcaactc 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 33508 - 33414
Alignment:
Q  64 tattttggtaaaaatttctaatgtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc 158  Q
    ||||||| |||| ||||||||||||||||||  || | |||||||||| ||||||  ||| |||||||  |||| ||| |||| |||||||||||    
T  33508 tattttgataaatatttctaatgtttgtgcacgattccttaatttgctcatttttcctttggaacaaattttttccaaaatactttattcaactc 33414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 10879 - 10783
Alignment:
Q  86 gtttgtgcaatatccattaatttgcttattttttgtttagaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||| || |||||||||||  ||||||| ||   ||||||  ||||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  10879 gtttgtgcaagattcattaatttgcacattttttttt---aacaaattttttacaagatacgttattcaacccgtgcttcgcacgggtttgtaactagtt 10783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 14630 - 14691
Alignment:
Q  125 gaacaaaacttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagttt 185  Q
    |||| ||| ||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  14630 gaactaaatttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 14691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 151931 - 151883
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaacta 181  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||    
T  151931 ttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaacta 151883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 17451 - 17400
Alignment:
Q  134 ttttacaagatacgttattcaactc-tgcgaagcacgggtttgtaactagtt 184  Q
    ||||| || |||||||||||||| | ||||||||||||||||||||||||||    
T  17451 ttttaaaaaatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 17400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 143255 - 143213
Alignment:
Q  143 atacgttattcaac-tctgcgaagcacgggtttgtaactagtt 184  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  143255 atacgttattcaacctgtgcgaagcacgggtttgtaactagtt 143213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 8213 - 8173
Alignment:
Q  147 gttattcaactc-tgcgaagcacgggtttgtaactagttta 186  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  8213 gttattcaacccgtgcgaagcacgggtttgtaactagttta 8173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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