View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15773_high_8 (Length: 451)

Name: NF15773_high_8
Description: NF15773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15773_high_8
NF15773_high_8
[»] chr5 (36 HSPs)
chr5 (15-286)||(39777089-39777359)
chr5 (106-282)||(32743840-32744015)
chr5 (295-426)||(291100-291231)
chr5 (291-422)||(12913802-12913933)
chr5 (295-422)||(19655161-19655288)
chr5 (320-422)||(16971172-16971274)
chr5 (320-421)||(3899867-3899968)
chr5 (309-422)||(29699384-29699497)
chr5 (344-422)||(2953242-2953320)
chr5 (300-402)||(16439146-16439248)
chr5 (349-422)||(2093945-2094018)
chr5 (320-421)||(26662427-26662529)
chr5 (320-421)||(26934022-26934124)
chr5 (320-422)||(28818945-28819047)
chr5 (296-426)||(30117832-30117962)
chr5 (291-402)||(3180088-3180198)
chr5 (320-402)||(16802472-16802554)
chr5 (373-420)||(32485630-32485677)
chr5 (373-422)||(13312272-13312321)
chr5 (295-376)||(19598335-19598416)
chr5 (368-428)||(16439140-16439200)
chr5 (295-354)||(16971220-16971279)
chr5 (295-341)||(13312267-13312313)
chr5 (368-422)||(19598340-19598394)
chr5 (318-392)||(38134411-38134485)
chr5 (330-422)||(2356312-2356401)
chr5 (285-382)||(39031199-39031296)
chr5 (379-428)||(39031238-39031287)
chr5 (344-428)||(228402-228486)
chr5 (295-354)||(2953266-2953325)
chr5 (295-354)||(3899915-3899974)
chr5 (365-416)||(7009401-7009452)
chr5 (369-434)||(291092-291158)
chr5 (288-341)||(12913892-12913945)
chr5 (368-416)||(17849221-17849269)
chr5 (295-339)||(22083001-22083045)
[»] chr8 (28 HSPs)
chr8 (295-422)||(5033164-5033291)
chr8 (295-421)||(35440978-35441104)
chr8 (295-422)||(33841599-33841726)
chr8 (295-429)||(10086760-10086894)
chr8 (295-422)||(45191135-45191262)
chr8 (295-402)||(8243416-8243523)
chr8 (291-402)||(34229640-34229751)
chr8 (295-422)||(5667100-5667227)
chr8 (295-428)||(43844473-43844604)
chr8 (320-428)||(39850983-39851091)
chr8 (295-422)||(8796425-8796552)
chr8 (320-426)||(6296633-6296739)
chr8 (291-402)||(4958599-4958708)
chr8 (344-402)||(34541831-34541889)
chr8 (295-354)||(5033237-5033296)
chr8 (355-402)||(35031642-35031689)
chr8 (368-422)||(5033169-5033223)
chr8 (295-341)||(5667186-5667232)
chr8 (368-422)||(43844545-43844599)
chr8 (369-422)||(5667105-5667158)
chr8 (296-341)||(10086846-10086891)
chr8 (295-362)||(2581828-2581895)
chr8 (295-354)||(33841594-33841653)
chr8 (295-354)||(35440972-35441031)
chr8 (368-422)||(8243464-8243518)
chr8 (368-422)||(33841667-33841721)
chr8 (368-422)||(35441045-35441099)
chr8 (344-413)||(31159903-31159972)
[»] chr1 (45 HSPs)
chr1 (295-422)||(48993925-48994052)
chr1 (295-428)||(29179599-29179732)
chr1 (291-402)||(9157309-9157420)
chr1 (295-422)||(32540756-32540883)
chr1 (295-426)||(17127568-17127699)
chr1 (295-422)||(5995372-5995499)
chr1 (318-422)||(33219599-33219703)
chr1 (295-402)||(37155049-37155156)
chr1 (285-382)||(36290455-36290552)
chr1 (291-402)||(4608995-4609106)
chr1 (295-392)||(1091582-1091679)
chr1 (288-376)||(44706838-44706926)
chr1 (344-422)||(15220863-15220941)
chr1 (320-422)||(29371396-29371498)
chr1 (299-401)||(45728294-45728396)
chr1 (318-404)||(46333972-46334058)
chr1 (320-422)||(49444921-49445021)
chr1 (349-402)||(1819517-1819570)
chr1 (295-368)||(21630045-21630118)
chr1 (295-402)||(48498418-48498525)
chr1 (320-402)||(5694918-5694999)
chr1 (320-402)||(8337879-8337961)
chr1 (283-363)||(28395628-28395708)
chr1 (335-402)||(741530-741597)
chr1 (320-402)||(34062237-34062319)
chr1 (324-402)||(47303427-47303505)
chr1 (320-402)||(48604975-48605057)
chr1 (295-354)||(48993920-48993979)
chr1 (368-422)||(9157318-9157372)
chr1 (368-418)||(21630054-21630104)
chr1 (368-422)||(45728295-45728349)
chr1 (368-422)||(48993993-48994047)
chr1 (295-402)||(19711208-19711313)
chr1 (350-402)||(28928807-28928859)
chr1 (291-354)||(17127563-17127626)
chr1 (291-354)||(29371444-29371507)
chr1 (295-354)||(49444916-49444975)
chr1 (368-426)||(17127640-17127698)
chr1 (296-354)||(29179601-29179659)
chr1 (368-422)||(29179673-29179727)
chr1 (295-340)||(5995459-5995504)
chr1 (295-340)||(46932000-46932045)
chr1 (295-340)||(46932072-46932116)
chr1 (283-339)||(15220902-15220958)
chr1 (378-422)||(36290493-36290537)
[»] chr4 (40 HSPs)
chr4 (288-422)||(23444277-23444411)
chr4 (295-421)||(51265448-51265574)
chr4 (309-422)||(47661859-47661972)
chr4 (295-422)||(35682169-35682296)
chr4 (295-422)||(6271705-6271832)
chr4 (344-422)||(42375062-42375140)
chr4 (285-418)||(47762601-47762734)
chr4 (295-402)||(26186044-26186149)
chr4 (350-416)||(25818387-25818453)
chr4 (320-422)||(53954638-53954740)
chr4 (295-382)||(30861822-30861909)
chr4 (350-404)||(28693949-28694003)
chr4 (296-422)||(44379934-44380060)
chr4 (320-402)||(55090024-55090106)
chr4 (320-392)||(40789207-40789279)
chr4 (295-342)||(2325068-2325115)
chr4 (283-354)||(47661918-47661989)
chr4 (344-402)||(47404613-47404671)
chr4 (344-402)||(50384133-50384191)
chr4 (350-402)||(31430489-31430541)
chr4 (350-402)||(52028607-52028659)
chr4 (294-354)||(53954686-53954746)
chr4 (283-354)||(23444260-23444331)
chr4 (378-428)||(5048886-5048936)
chr4 (368-422)||(26186090-26186144)
chr4 (289-351)||(44380009-44380071)
chr4 (294-354)||(35682242-35682302)
chr4 (291-326)||(25617980-25618015)
chr4 (295-354)||(42375086-42375145)
chr4 (350-393)||(45591447-45591490)
chr4 (295-357)||(3862619-3862681)
chr4 (368-422)||(3862622-3862676)
chr4 (295-357)||(3871376-3871438)
chr4 (368-422)||(3871379-3871433)
chr4 (368-422)||(23444345-23444399)
chr4 (295-341)||(30709989-30710035)
chr4 (368-422)||(51265453-51265507)
chr4 (353-402)||(24006098-24006147)
chr4 (283-320)||(54716349-54716386)
chr4 (310-402)||(31532717-31532809)
[»] chr7 (27 HSPs)
chr7 (295-422)||(11016872-11016999)
chr7 (295-422)||(38975808-38975935)
chr7 (295-402)||(41018256-41018363)
chr7 (298-411)||(15027548-15027661)
chr7 (295-418)||(4290548-4290671)
chr7 (320-422)||(42628323-42628425)
chr7 (295-372)||(45231908-45231985)
chr7 (355-419)||(48000705-48000769)
chr7 (350-422)||(48000795-48000867)
chr7 (295-402)||(34854723-34854830)
chr7 (289-376)||(30217508-30217594)
chr7 (320-402)||(4649348-4649432)
chr7 (295-392)||(27028831-27028928)
chr7 (355-413)||(6225542-6225600)
chr7 (320-390)||(10419486-10419556)
chr7 (295-341)||(11016958-11017004)
chr7 (310-376)||(22764754-22764820)
chr7 (320-392)||(7671949-7672021)
chr7 (383-422)||(34854786-34854825)
chr7 (383-422)||(41018319-41018358)
chr7 (359-402)||(41084208-41084251)
chr7 (295-354)||(42628371-42628430)
chr7 (368-422)||(11016877-11016931)
chr7 (320-402)||(29053342-29053424)
chr7 (368-422)||(38975813-38975867)
chr7 (298-340)||(48000827-48000869)
chr7 (295-340)||(38975895-38975940)
[»] chr3 (25 HSPs)
chr3 (295-422)||(30734410-30734537)
chr3 (291-402)||(33689175-33689286)
chr3 (295-416)||(47492061-47492182)
chr3 (295-428)||(51046075-51046208)
chr3 (295-422)||(41752967-41753094)
chr3 (288-402)||(43139737-43139851)
chr3 (296-422)||(50524706-50524832)
chr3 (291-398)||(55223231-55223338)
chr3 (320-422)||(1801454-1801556)
chr3 (309-402)||(50549992-50550085)
chr3 (359-422)||(45103117-45103180)
chr3 (291-354)||(30734401-30734464)
chr3 (320-402)||(30476502-30476584)
chr3 (296-422)||(30580764-30580890)
chr3 (320-402)||(47677283-47677365)
chr3 (330-398)||(29031746-29031814)
chr3 (344-416)||(30904296-30904368)
chr3 (298-404)||(18321657-18321763)
chr3 (368-422)||(33689184-33689238)
chr3 (320-372)||(39385746-39385798)
chr3 (368-434)||(50549970-50550037)
chr3 (295-340)||(1801449-1801494)
chr3 (378-422)||(18321659-18321703)
chr3 (368-428)||(30580832-30580892)
chr3 (291-319)||(47677263-47677291)
[»] scaffold0586 (1 HSPs)
scaffold0586 (291-422)||(7055-7185)
[»] chr2 (26 HSPs)
chr2 (295-422)||(16514427-16514554)
chr2 (295-422)||(29508698-29508826)
chr2 (330-422)||(14229361-14229453)
chr2 (320-422)||(38933615-38933717)
chr2 (311-422)||(6721970-6722081)
chr2 (320-422)||(6217232-6217334)
chr2 (329-422)||(14470600-14470693)
chr2 (310-405)||(8534164-8534259)
chr2 (291-422)||(24115919-24116050)
chr2 (291-354)||(14470591-14470654)
chr2 (309-402)||(15011297-15011390)
chr2 (320-404)||(2893991-2894075)
chr2 (350-422)||(14892318-14892390)
chr2 (350-422)||(37961764-37961836)
chr2 (291-338)||(45213892-45213939)
chr2 (320-402)||(2828612-2828694)
chr2 (283-351)||(14892339-14892407)
chr2 (320-420)||(29925580-29925680)
chr2 (367-427)||(33018620-33018680)
chr2 (303-402)||(37762029-37762128)
chr2 (384-422)||(45213892-45213930)
chr2 (368-416)||(6721965-6722013)
chr2 (295-354)||(16514500-16514559)
chr2 (295-338)||(29508693-29508736)
chr2 (295-340)||(6217227-6217272)
chr2 (295-376)||(9173035-9173116)
[»] scaffold0016 (2 HSPs)
scaffold0016 (320-422)||(49711-49813)
scaffold0016 (295-354)||(49706-49765)
[»] chr6 (14 HSPs)
chr6 (320-422)||(24618609-24618711)
chr6 (291-422)||(17750902-17751032)
chr6 (344-422)||(12343152-12343230)
chr6 (288-402)||(551193-551307)
chr6 (344-422)||(13043509-13043587)
chr6 (295-389)||(24587464-24587558)
chr6 (320-402)||(10521877-10521959)
chr6 (368-422)||(24587469-24587523)
chr6 (353-402)||(2315332-2315381)
chr6 (320-377)||(31654333-31654390)
chr6 (291-354)||(17750978-17751041)
chr6 (367-422)||(24975760-24975815)
chr6 (295-341)||(24618604-24618650)
chr6 (366-426)||(7384492-7384552)
[»] scaffold0180 (2 HSPs)
scaffold0180 (350-422)||(19130-19202)
scaffold0180 (289-354)||(19119-19184)
[»] scaffold0161 (1 HSPs)
scaffold0161 (295-422)||(27228-27355)
[»] scaffold1033 (1 HSPs)
scaffold1033 (344-401)||(2265-2322)
[»] scaffold1029 (1 HSPs)
scaffold1029 (344-401)||(2265-2322)
[»] scaffold0536 (1 HSPs)
scaffold0536 (309-413)||(4909-5010)
[»] scaffold0047 (1 HSPs)
scaffold0047 (320-402)||(63785-63867)
[»] scaffold0481 (1 HSPs)
scaffold0481 (350-398)||(2919-2967)


Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 39777359 - 39777089
Alignment:
Q  15 tatggtagaagaacgatagaaaagatgagagcttaatagaaagcatgatgagcttcttttctatatgttccatcttctctctttaatatagagtatatat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  39777359 tatggtagaagaacgatagaaaagatgagagcttaatagaaagcatgatgagcttcttttctatatgttccctcttctctcttttata-agagtatatat 39777261  T
Q  115 atgatgctagtggcacaaagtaaatgaatggccctatctttccgttgcaagatttcttagcaatataaaggatatttatggcaatgaaaactgatggaat 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39777260 atgatgctagtggcacaaactaaatgaatggccctatctttccgttgcaagatttcttagcaatataaaggatatttatggcaatgaaaactgatggaat 39777161  T
Q  215 aaaggttgattttttcatgtaacgtttagccaattgaatatgaagaattaaggagacaaacaatagtaggta 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39777160 aaaggttgattttttcatgtaacgtttagccaattgaatatgaagaattaaggagacaaacaatattaggta 39777089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 106 - 282
Target Start/End: Original strand, 32743840 - 32744015
Alignment:
Q  106 agtatatatatgatgctagtggcacaaagtaaatgaatggccctatctttccgttgcaagatttcttagcaatataaaggatatttatggcaatgaaaac 205  Q
    ||||||||| ||| |  |||||||||||  ||||||||||| ||||||||||||||||| |||||||||||| |||||  ||||| ||||||||||||||    
T  32743840 agtatatatgtgacgtcagtggcacaaacaaaatgaatggctctatctttccgttgcaacatttcttagcaacataaaaaatattaatggcaatgaaaac 32743939  T
Q  206 tgatggaataaaggttgattttttcatgtaacgtttagccaattgaatatgaagaattaaggagacaaacaatagta 282  Q
    | ||||| |||  |||  ||||||| ||||| ||||||| ||||||||||||||| ||||| || ||||||||||||    
T  32743940 taatggattaagcgtttgttttttc-tgtaatgtttagctaattgaatatgaagatttaagtaggcaaacaatagta 32744015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 426
Target Start/End: Original strand, 291100 - 291231
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||| ||||| |||||||||||| ||| |||| ||||||||||||    
T  291100 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtatttctttctctttcacaaacattgtgacattgtgattgat 291199  T
Q  395 caatgtcatcaatgtcacccaactctatatca 426  Q
    |||||||| |||||||||||||||||||||||    
T  291200 caatgtcaccaatgtcacccaactctatatca 291231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 291 - 422
Target Start/End: Original strand, 12913802 - 12913933
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    |||||||||||| ||||  ||||||||| |||||||| ||||| |||||||  |||| ||||||| ||||||||||||||||||||  ||| ||||||||    
T  12913802 ttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtgtatctctctctttcacaagcattatgacattgtgat 12913901  T
Q  391 tgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||| |||| ||| |||||||||||||||||||    
T  12913902 tgaccaatatcaccaatgtcacccaactctat 12913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 19655161 - 19655288
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||      
T  19655161 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgga 19655260  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| ||||||||| |||||||||    
T  19655261 caatgtcaccaatgtcactcaactctat 19655288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 16971172 - 16971274
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  16971172 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 16971271  T
Q  420 tat 422  Q
    |||    
T  16971272 tat 16971274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 421
Target Start/End: Original strand, 3899867 - 3899968
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  3899867 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 3899966  T
Q  420 ta 421  Q
    ||    
T  3899967 ta 3899968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 422
Target Start/End: Original strand, 29699384 - 29699497
Alignment:
Q  309 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 408  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| ||||     
T  29699384 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaata 29699483  T
Q  409 tcacccaactctat 422  Q
    ||||||||||||||    
T  29699484 tcacccaactctat 29699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 2953242 - 2953320
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| |||||||||||||||||||    
T  2953242 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctat 2953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 402
Target Start/End: Original strand, 16439146 - 16439248
Alignment:
Q  300 atagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatg 399  Q
    |||||||| ||| | |||| ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatg 16439245  T
Q  400 tca 402  Q
    |||    
T  16439246 tca 16439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 2094018 - 2093945
Alignment:
Q  349 cttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||| ||||||||||||||    
T  2094018 cttgtgtttctctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctat 2093945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 421
Target Start/End: Original strand, 26662427 - 26662529
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga-ttgatcaatgtcatcaatgtcacccaact 418  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| ||||||| |||| |||||||| |||| ||||||||||    
T  26662427 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26662526  T
Q  419 cta 421  Q
    |||    
T  26662527 cta 26662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 421
Target Start/End: Original strand, 26934022 - 26934124
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga-ttgatcaatgtcatcaatgtcacccaact 418  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| ||||||| |||| |||||||| |||| ||||||||||    
T  26934022 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26934121  T
Q  419 cta 421  Q
    |||    
T  26934122 cta 26934124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 28818945 - 28819047
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    ||||||||  |||| |||||||  |||||||||| |||||||||||||||||||||| |||| ||| ||||||| |||||||| |||| |||| ||||||    
T  28818945 tgacattggtcaatcacaatgtcacaatacttgtatttctctctctttcacaagcattgtgacattatgattgaccaatgtcaccaatatcactcaactc 28819044  T
Q  420 tat 422  Q
    |||    
T  28819045 tat 28819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 426
Target Start/End: Complemental strand, 30117962 - 30117832
Alignment:
Q  296 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 395  Q
    |||||||||||| | |||||||| ||| ||||  |||| | ||||   |||| ||||||||||||||| ||||| || ||| |||| |||||||||| ||    
T  30117962 tgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtgtttctctctttttcataaacattgtgacattgtgattggtc 30117863  T
Q  396 aatgtcatcaatgtcacccaactctatatca 426  Q
    ||| ||| |||||||||||||||||||||||    
T  30117862 aatatcaccaatgtcacccaactctatatca 30117832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 3180198 - 3180088
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    |||||| |||||||||| ||| |||||| ||||||||  |||| ||||||   |||| |||||||||||||||||||||||| ||| |||| ||| ||||    
T  3180198 ttgtgtcacatagagtt-ggtaacattggtgacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattatgat 3180100  T
Q  391 tgatcaatgtca 402  Q
    ||||||||||||    
T  3180099 tgatcaatgtca 3180088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 16802472 - 16802554
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||| ||||| |||||||  ||||| |||||||||||||||||| |||||||| |||| ||| |||||| |||||||||    
T  16802472 tgacattggccaatcacaatgtaacaatatttgtgtttctctctcttttacaagcattgtgacattctgattggtcaatgtca 16802554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 32485630 - 32485677
Alignment:
Q  373 gcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactct 420  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  32485630 gcattgtgatattgtgattgatcaatgtcaccaatgtcacccaactct 32485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 422
Target Start/End: Complemental strand, 13312321 - 13312272
Alignment:
Q  373 gcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  13312321 gcattgtgacattgtgattgatcaatgtcatcaatgtcacctaactctat 13312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 376
Target Start/End: Original strand, 19598335 - 19598416
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 376  Q
    ||||||||||||| ||| |||||| ||||||||  |||| |||||    |||| ||||||||||||||||||||||||||||    
T  19598335 gtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtgtttctctctctttcacaagcat 19598416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 428
Target Start/End: Complemental strand, 16439200 - 16439140
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 428  Q
    ||||||||| |||| ||||||||||| |||||||| |||| | ||||||||||||||||||    
T  16439200 cacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctatatcatc 16439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 16971279 - 16971220
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  16971279 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 16971220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 13312267 - 13312313
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||    
T  13312267 gtgacatagagttaggtgacattgatgacattgatcaatcacaatgt 13312313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 19598394 - 19598340
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| ||| |||||||||||| |||||||| |||||| ||||||||||||    
T  19598394 cacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctat 19598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 38134485 - 38134411
Alignment:
Q  318 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 392  Q
    ||||| |||| ||||| |||||||  |||| ||||||||||| |||||||||| ||||| |||| ||||||||||    
T  38134485 gatgatattggccaatcacaatgtcacaatgcttgtgtttctttctctttcactagcattgtgacattgtgattg 38134411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 2356312 - 2356401
Alignment:
Q  330 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||||||||||||  ||| ||||||||  ||||||||||| |||||| |||| | ||||||||  |||||||| |||||||| ||||||||||    
T  2356312 caattacaatgttataatgcttgtgtt--tctctctttcataagcattgtgaca-tgtgattggccaatgtcaccaatgtcatccaactctat 2356401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 39031296 - 39031199
Alignment:
Q  285 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 382  Q
    |||||||||  |||||||||||  |||||||||| ||||| ||| |||| ||||| |   |||| |||| ||||||| |||||||||||||| |||||    
T  39031296 tagtatttggatgacatagagtggggtgacattggtgacactgatcaatcacaatatcataatatttgtatttctctttctttcacaagcattgtgat 39031199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 428
Target Start/End: Original strand, 39031238 - 39031287
Alignment:
Q  379 tgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 428  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  39031238 tgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatc 39031287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 228402 - 228486
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 428  Q
    ||||| |||||||| ||||||||| ||||||||  ||| |||||||||||  ||| |||||||| | |||||||| ||| |||||    
T  228402 caatatttgtgtttttctctcttttacaagcattttgacattgtgattgacaaatctcatcaatattacccaactttatgtcatc 228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 2953325 - 2953266
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| ||||||    
T  2953325 gtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 2953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 3899974 - 3899915
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  3899974 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 7009401 - 7009452
Alignment:
Q  365 tttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 416  Q
    |||||||||||| |||||||||||||||| |||| ||| |||||||| ||||    
T  7009401 tttcacaagcattgtgatattgtgattgaccaatatcaccaatgtcatccaa 7009452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 291158 - 291092
Alignment:
Q  369 acaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca-tcaagtat 434  Q
    |||||||| |||  ||||||||||  |||||||| ||||||||||||||||||| ||| ||||||||    
T  291158 acaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcactcaagtat 291092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 12913945 - 12913892
Alignment:
Q  288 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    |||||||||||||||||||| |||||||||| ||| ||||  |||| |||||||    
T  12913945 tatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgt 12913892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 17849221 - 17849269
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 416  Q
    ||||||||| | |||||||||||||| |||||||| |||| ||||||||    
T  17849221 cacaagcattgcgatattgtgattgaccaatgtcaccaatatcacccaa 17849269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 22083001 - 22083045
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaat 339  Q
    |||||||||||||  |||||||| ||||||||||||||| |||||    
T  22083001 gtgacatagagttgtgtgacattaatgacattgaccaatcacaat 22083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 9e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 5033164 - 5033291
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  5033164 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 5033263  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||||||||||||||    
T  5033264 caatgtcaccaatgtcacccaactctat 5033291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 35441104 - 35440978
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  35441104 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 35441005  T
Q  395 caatgtcatcaatgtcacccaactcta 421  Q
    |||||||| ||||||||||||||||||    
T  35441004 caatgtcaccaatgtcacccaactcta 35440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 33841726 - 33841599
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  33841726 gtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacaatgtgattggt 33841627  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||||||||||||||    
T  33841626 caatgtcaccaatgtcacccaactctat 33841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 429
Target Start/End: Original strand, 10086760 - 10086894
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    |||||||||| || |||||||||  ||||||||  |||| |||||||   |||  ||||||||||||||||||||||| ||| |||| |||||||||| |    
T  10086760 gtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattggt 10086859  T
Q  395 caatgtcatcaatgtcacccaactctatatcatca 429  Q
    |||||||| ||||||||||||||||||| ||||||    
T  10086860 caatgtcaccaatgtcacccaactctatgtcatca 10086894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 45191262 - 45191135
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| | ||| |||| |||||||||||||| | |||||| ||||  |||||||||||||||||||| |||||| |||  ||||||||| ||    
T  45191262 gtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtgtttctctctctttcataagcattgtggcattgtgattaat 45191163  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||| ||| ||||||||||    
T  45191162 caatgtcaccaatatcatccaactctat 45191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 8243523 - 8243416
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||| |||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  ||||||||||||    
T  8243523 gtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattgat 8243424  T
Q  395 caatgtca 402  Q
    ||||||||    
T  8243423 caatgtca 8243416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 34229640 - 34229751
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||||||||||| |||||||||  ||||||    |||| |||||||   ||| |||||||||||||||||||||||||||| |||||||||||||    
T  34229640 ttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtgtttctctctctttcacaagcattgtgatattgtgat 34229739  T
Q  391 tgatcaatgtca 402  Q
    ||| ||||||||    
T  34229740 tgaccaatgtca 34229751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 5667100 - 5667227
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| | |||||||| ||||||||  |||| |||||||  |||| ||||| ||||||||||||||||||||||  ||| ||||| ||||      
T  5667100 gtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgtatttctctctctttcacaagcattatgacattgtaattggc 5667199  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||| | ||||||||    
T  5667200 caatgtcaccaatgtcatcaaactctat 5667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 43844604 - 43844473
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| | |||||||| ||| ||||| |||| |||||||  |||| ||||||||||||||||  ||||||||||  ||| ||| ||||| |     
T  43844604 gtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtgtttctctctc--tcacaagcatcctgacattatgattaac 43844507  T
Q  395 caatgtcatcaatgtcacccaactctatatcatc 428  Q
    |||| |||||||| |||||||||||||| |||||    
T  43844506 caatatcatcaatatcacccaactctatgtcatc 43844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 428
Target Start/End: Original strand, 39850983 - 39851091
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  | |||||||||||| ||||||||| ||||||||| |||||     
T  39850983 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattataatattgtgattggtcaatgtcaccaatgtcactcaactt 39851082  T
Q  420 tatatcatc 428  Q
    ||| |||||    
T  39851083 tatgtcatc 39851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 8796425 - 8796552
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| ||||| |||  ||| ||||  |||| |||||||  |||| ||||||||||||| |||||||||||||| |||| ||| |||||| |    
T  8796425 gtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtgtttctctatctttcacaagcattgtgacattttgattggt 8796524  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||| ||||| | ||||||    
T  8796525 caatgtcaccaatatcacctagctctat 8796552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 426
Target Start/End: Original strand, 6296633 - 6296739
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||||||||| |||||||   ||| ||||||||||||||||||||||||| || |||| ||| | |||||  |||||||  ||||||| |||||||    
T  6296633 tgacattgaccaatcacaatgtcataatgcttgtgtttctctctctttcacaagtattgtgacattataattgactaatgtcactaatgtcatccaactc 6296732  T
Q  420 tatatca 426  Q
    |||||||    
T  6296733 tatatca 6296739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 4958599 - 4958708
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    |||||||||||||| |||| ||| ||||||||||||| ||||| |||||||   |||  |||||||||||||||||||||||| || ||||  |||||||    
T  4958599 ttgtgtgacatagaatttg-tgatattgatgacattggccaatcacaatgtcataatgtttgtgtttctctctctttcacaagtattgtga-cttgtgat 4958696  T
Q  391 tgatcaatgtca 402  Q
    || |||||||||    
T  4958697 tggtcaatgtca 4958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 34541889 - 34541831
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  34541889 caatgcttgtgtttctctctctttcacaagcattgtgatattatgattggccaatgtca 34541831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 5033296 - 5033237
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  5033296 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 5033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 402
Target Start/End: Complemental strand, 35031689 - 35031642
Alignment:
Q  355 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||    
T  35031689 tttctctctctttcacaagcattgcgacattgtgattgatcaatgtca 35031642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 5033223 - 5033169
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  5033223 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 5033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 5667232 - 5667186
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  5667232 gtgacatagagtttgatgacattggtgacattggccaattacaatgt 5667186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 43844545 - 43844599
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  43844545 cacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctat 43844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 422
Target Start/End: Complemental strand, 5667158 - 5667105
Alignment:
Q  369 acaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||| ||||||||||| |||||||| |||||||| ||||||||||    
T  5667158 acaagcattgtgacattgtgattgaccaatgtcaccaatgtcatccaactctat 5667105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 10086891 - 10086846
Alignment:
Q  296 tgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgt 10086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 2581828 - 2581895
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctc 362  Q
    |||||||||| || |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||    
T  2581828 gtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtgtttctctc 2581895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 33841594 - 33841653
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||  |||| ||||||    
T  33841594 gtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtg 33841653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 35440972 - 35441031
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  35440972 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 35441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 8243464 - 8243518
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||| ||| |||| |||||||||||||||||||    
T  8243464 cacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctat 8243518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 33841667 - 33841721
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||| |||||| ||||||||| |||||||||||||||||||    
T  33841667 cacaagcattgtggcattctgattggtcaatgtcaccaatgtcacccaactctat 33841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 35441045 - 35441099
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  35441045 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 35441099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 31159903 - 31159972
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacc 413  Q
    ||||| || |||||||||||||||||||||||| |||| ||| ||||||   ||||||| |||| |||||    
T  31159903 caatatttttgtttctctctctttcacaagcattgtgacattatgattggcgaatgtcaccaatatcacc 31159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 9e-40; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 48994052 - 48993925
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  48994052 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 48993953  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||||||||||||||    
T  48993952 caatgtcaccaatgtcacccaactctat 48993925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 29179732 - 29179599
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  29179732 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 29179633  T
Q  395 caatgtcatcaatgtcacccaactctatatcatc 428  Q
    || ||||| ||||||||||||||||||| |||||    
T  29179632 cagtgtcaccaatgtcacccaactctatgtcatc 29179599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 9157309 - 9157420
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||||||||||| |||||||||| | |||||||||||| |||||||  |||| |||||||||||||||||||| ||||||| |||||||||||||    
T  9157309 ttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttctcaagcattgtgatattgtgat 9157408  T
Q  391 tgatcaatgtca 402  Q
    ||||||||||||    
T  9157409 tgatcaatgtca 9157420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 32540883 - 32540756
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    |||||||||| || | |||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||      
T  32540883 gtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 32540784  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    ||||| || |||||||||||||||||||    
T  32540783 caatgccaccaatgtcacccaactctat 32540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 295 - 426
Target Start/End: Complemental strand, 17127699 - 17127568
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    |||| |||||||| |||||||||  |||||||||||||| | |||||  |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  17127699 gtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 17127600  T
Q  395 caatgtcatcaatgtcacccaactctatatca 426  Q
    ||||||||  ||||||||| ||||||||||||    
T  17127599 caatgtcactaatgtcacctaactctatatca 17127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 5995372 - 5995499
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||||| |||||||| | |||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  |||||||||| |    
T  5995372 gtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattggt 5995471  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||| ||||||||||    
T  5995472 caatgtcaccaatgtcatccaactctat 5995499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 422
Target Start/End: Original strand, 33219599 - 33219703
Alignment:
Q  318 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaac 417  Q
    ||||||||||| |||| |||||||| |||| ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| |||||||| |||||    
T  33219599 gatgacattgatcaatcacaatgttacaatgcttgtgtttttctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatgtcatccaac 33219698  T
Q  418 tctat 422  Q
    |||||    
T  33219699 tctat 33219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 295 - 402
Target Start/End: Original strand, 37155049 - 37155156
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||  |||| ||||||||||||||||||||||||| || |||| ||||||||||      
T  37155049 gtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagtattgtgacattgtgattggc 37155148  T
Q  395 caatgtca 402  Q
    ||||||||    
T  37155149 caatgtca 37155156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 36290552 - 36290455
Alignment:
Q  285 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 382  Q
    ||||| ||| ||||||||||||| |||||||||| || ||||||||||| |||||||  ||||| ||||||||||||||||||||||||||| |||||    
T  36290552 tagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaatatttgtgtttctctctctttcacaagcattgtgat 36290455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 4608995 - 4609106
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    |||||||| || ||||| |||||||| | ||||||||||| || |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||    
T  4608995 ttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgat 4609094  T
Q  391 tgatcaatgtca 402  Q
    ||| ||||||||    
T  4609095 tgaccaatgtca 4609106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 1091679 - 1091582
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 392  Q
    ||||||||||||| ||||| |||| |||| ||||||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  1091679 gtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 1091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 44706926 - 44706838
Alignment:
Q  288 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 376  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||    
T  44706926 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcat 44706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 15220863 - 15220941
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||| ||| |||||||||||||||||||    
T  15220863 caatgcttgtgtttctctctctttcacaagcattgtgagattgtgattggccaatatcaccaatgtcacccaactctat 15220941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 29371396 - 29371498
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||| | |||    
T  29371396 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctc 29371495  T
Q  420 tat 422  Q
    |||    
T  29371496 tat 29371498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 401
Target Start/End: Original strand, 45728294 - 45728396
Alignment:
Q  299 catagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 398  Q
    ||||||||| ||||| |||| ||| |||||||||| ||||| |  |||| ||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaagcattatgacattgtgattgaccaat 45728393  T
Q  399 gtc 401  Q
    |||    
T  45728394 gtc 45728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 46334058 - 46333972
Alignment:
Q  318 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 404  Q
    |||||||||||||||| |||||||  |||| ||||||||| |||||||||||||||||| |||| ||||||||||  ||||||||||    
T  46334058 gatgacattgaccaatcacaatgtcacaatgcttgtgtttttctctctttcacaagcattgtgacattgtgattggccaatgtcatc 46333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 49445021 - 49444921
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||  ||||||||| || | ||||||||||||| |||||| ||||||||||||||||    
T  49445021 tgacattggccaatcacaatgccacaatgcttgtgtttctctctct--cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactc 49444924  T
Q  420 tat 422  Q
    |||    
T  49444923 tat 49444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 1819570 - 1819517
Alignment:
Q  349 cttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  1819570 cttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtca 1819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 21630045 - 21630118
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttc 368  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  21630045 gtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttc 21630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 402
Target Start/End: Original strand, 48498418 - 48498525
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||  ||||||||  |||| | |||    ||||  |||||||||||||||||||||||||||||| | |||||||||| |    
T  48498418 gtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtgtttctctctctttcacaagcatggtaacattgtgattggt 48498517  T
Q  395 caatgtca 402  Q
    ||||||||    
T  48498518 caatgtca 48498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 5694999 - 5694918
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  5694999 tgacattggtcaattacaatgtcacaatatttgtgtttctctctctttcacaagcat-ttaatattgtgattgaccaatgtca 5694918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 8337961 - 8337879
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||||||| ||||||   ||||  ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  8337961 tgacattgaccaatcacaatgccacaatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 8337879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 28395628 - 28395708
Alignment:
Q  283 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctct 363  Q
    ||||| ||||| || ||||||||||  ||||||||| |||||||||||||| |||||||  |||| |||||||||||||||    
T  28395628 ggtagcatttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctct 28395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 741597 - 741530
Alignment:
Q  335 acaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  741597 acaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgggcaatgtca 741530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 34062237 - 34062319
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||| ||||| ||||||   |||| ||| |||||||||||||||||||| ||| |||| |||||||||| |||||||||    
T  34062237 tgacattggccaatcacaatgccacaatgcttatgtttctctctctttcacaaacattgtgacattgtgattggtcaatgtca 34062319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 47303427 - 47303505
Alignment:
Q  324 attgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||| |||||||   |||  ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  47303427 attgaccaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 47303505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 48605057 - 48604975
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||| ||||||| |||||  |||| |||| |||||||||||||||||||  || |||| ||||||||||| ||||||||    
T  48605057 tgacattggccaattataatgtcacaatgcttgcgtttctctctctttcacaaatattgtgacattgtgattgaccaatgtca 48604975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 48993920 - 48993979
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  48993920 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 48993979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 9157372 - 9157318
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||| |||||||||| ||||||| | |||||||||||||||||||    
T  9157372 cacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctat 9157318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 21630104 - 21630054
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaact 418  Q
    ||||||||| |||| |||||||||| ||||||||| |||||||||||||||    
T  21630104 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaact 21630054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 45728349 - 45728295
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  45728349 cacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctat 45728295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 48993993 - 48994047
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  48993993 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48994047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 19711313 - 19711208
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    |||| ||| ||||||||||||||| | |||||| |  ||||||||||  |||| ||| |||||||  |||||||||| |||| || | |||||||||| |    
T  19711313 gtgatataaagtttggtgacattggtaacattggctgattacaatgtcacaattcttatgtttct--ctctttcacatgcattgtaacattgtgattggt 19711216  T
Q  395 caatgtca 402  Q
    ||||||||    
T  19711215 caatgtca 19711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 28928859 - 28928807
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||||||||||||||||||||  |||| ||||||||||  ||||||||    
T  28928859 ttgtgtttctctctctttcacaagcactgtgacattgtgattggccaatgtca 28928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 17127563 - 17127626
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    |||||||| |||||||| |||||||||  |||||||||||||| |||||||  |||| ||||||    
T  17127563 ttgtgtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtg 17127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 29371507 - 29371444
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||||| | |||||||||| ||| |||||||||| |||||||  |||| ||||||    
T  29371507 ttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtg 29371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 49444916 - 49444975
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| |||||| || |||| |||||||| |||| ||||||    
T  49444916 gtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg 49444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 17127640 - 17127698
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca 426  Q
    ||||||||| |||| ||| |||||| |||||||||  ||||||||| ||||||||||||    
T  17127640 cacaagcattgtgacattttgattggtcaatgtcactaatgtcacctaactctatatca 17127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 354
Target Start/End: Original strand, 29179601 - 29179659
Alignment:
Q  296 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||  |||| ||||||    
T  29179601 tgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtg 29179659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 29179673 - 29179727
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  29179673 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 29179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 5995504 - 5995459
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    ||||||||||||| | |||||||| |||||||||||||| ||||||    
T  5995504 gtgacatagagttggatgacattggtgacattgaccaatcacaatg 5995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 46932000 - 46932045
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  46932000 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 46932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 46932116 - 46932072
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  46932116 gtgacatagagtt-ggtgacattggtgacattgaccaatcacaatg 46932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 15220958 - 15220902
Alignment:
Q  283 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaat 339  Q
    ||||| ||||| ||||||||||||| |||||||||| ||| |||| ||||| |||||    
T  15220958 ggtagcatttgggtgacatagagttgggtgacattggtgatattggccaatcacaat 15220902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 36290493 - 36290537
Alignment:
Q  378 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||||| |||||| || |||||||||||||||||||    
T  36290493 gtgacattgtgattggtcaatgccaccaatgtcacccaactctat 36290537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 288 - 422
Target Start/End: Complemental strand, 23444411 - 23444277
Alignment:
Q  288 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 387  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||    
T  23444411 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 23444312  T
Q  388 gattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||| ||||||||| |||||||||||||||||||    
T  23444311 gattggtcaatgtcaccaatgtcacccaactctat 23444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 421
Target Start/End: Original strand, 51265448 - 51265574
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||| |||||| |    
T  51265448 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggt 51265547  T
Q  395 caatgtcatcaatgtcacccaactcta 421  Q
    |||||||| ||||||||||||||||||    
T  51265548 caatgtcaccaatgtcacccaactcta 51265574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 309 - 422
Target Start/End: Original strand, 47661859 - 47661972
Alignment:
Q  309 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 408  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||    
T  47661859 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatg 47661958  T
Q  409 tcacccaactctat 422  Q
    ||||||||||||||    
T  47661959 tcacccaactctat 47661972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 35682169 - 35682296
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| ||||| |||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  35682169 gtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 35682268  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||||| ||||||||    
T  35682269 caatgtcaccaatgtcacctaactctat 35682296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 6271705 - 6271832
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||||||||||      
T  6271705 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 6271804  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||| |||| |||||||||    
T  6271805 caatgtcaccaatatcactcaactctat 6271832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 42375062 - 42375140
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  42375062 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctat 42375140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 418
Target Start/End: Original strand, 47762601 - 47762734
Alignment:
Q  285 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatat 384  Q
    ||||||||| ||||||||||| |  |||| |||  |||||||||||||| |||||||| ||||  || |||||||||||||||||||||||| |||| ||    
T  47762601 tagtatttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatgtttatgtttctctctctttcacaagcattgtgacat 47762700  T
Q  385 tgtgattgatcaatgtcatcaatgtcacccaact 418  Q
    | || |||| |||||||| |||| ||| ||||||    
T  47762701 tatggttgaccaatgtcaccaatatcatccaact 47762734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 26186149 - 26186044
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||| |  |||| |||||||||||  ||||||||||||||| |||| |||||||||||     
T  26186149 gtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattgac 26186052  T
Q  395 caatgtca 402  Q
    ||||||||    
T  26186051 caatgtca 26186044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 25818453 - 25818387
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 416  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  25818453 ttgtgtttctctctctttcacaatcattgtgacattgtgattgaccaatgtcatcaatgtcacccaa 25818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 53954638 - 53954740
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| |||||||  |||| || ||||||||| ||||||||||||||| |||| ||||| ||||  |||||||| ||||||||||||||||    
T  53954638 tgacattggccaatcacaatgtcacaatgctagtgtttctcactctttcacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactc 53954737  T
Q  420 tat 422  Q
    |||    
T  53954738 tat 53954740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 30861909 - 30861822
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 382  Q
    ||||||||||||| | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||||    
T  30861909 gtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgat 30861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 28694003 - 28693949
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 404  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  28694003 ttgtgtttctctctctttcacaaacattgtgatattgtgattggtcaatgtcatc 28693949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 422
Target Start/End: Original strand, 44379934 - 44380060
Alignment:
Q  296 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 395  Q
    ||||||||||||  |||||||||  ||||||| ||||||| |||||  |||| |||| |||||||||| ||| | ||| || || | |||||||||| ||    
T  44379934 tgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttgcgtttctctctattttataagtattgtaacattgtgattggtc 44380033  T
Q  396 aatgtcatcaatgtcacccaactctat 422  Q
    ||| ||| ||||||||| |||||||||    
T  44380034 aatatcaccaatgtcactcaactctat 44380060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 55090106 - 55090024
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||  |||| |||||||  |||| ||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  55090106 tgacattggtcaatcacaatgtcacaatgcttgtgtctctctctctttcacaagcattgtgacattgtgattgaccaatgtca 55090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 40789207 - 40789279
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 392  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  40789207 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 40789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 2325115 - 2325068
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgtt 342  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  2325115 gtgacatagagtttggtgacattgatgacattgacaaatcacaatgtt 2325068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 47661989 - 47661918
Alignment:
Q  283 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  47661989 ggtagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 47661918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 47404671 - 47404613
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||| |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  47404671 caatgcttgggtttctctctctttcacaagcattgtgacattgtgattgaccaatgtca 47404613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 50384191 - 50384133
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  50384191 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 50384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 31430541 - 31430489
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||||||||||||| |||||| |||| |||||||||| |||||||||    
T  31430541 ttgtgtttctctctctttcataagcattgtgacattgtgattggtcaatgtca 31430489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 52028607 - 52028659
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  52028607 ttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 52028659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 53954746 - 53954686
Alignment:
Q  294 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||  |||| ||||||    
T  53954746 tgtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtg 53954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 23444260 - 23444331
Alignment:
Q  283 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||| ||||| || |||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  23444260 ggtagcatttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 23444331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 5048886 - 5048936
Alignment:
Q  378 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 428  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||| |||||    
T  5048886 gtgacattatgattgaccaatgtcatcaatgtcacccaactctatgtcatc 5048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 26186090 - 26186144
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||    
T  26186090 cacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctat 26186144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 44380071 - 44380009
Alignment:
Q  289 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 351  Q
    ||||| |||||||||||||  ||||||||| ||| |||||||||| |||||||| ||||||||    
T  44380071 atttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatactt 44380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 35682302 - 35682242
Alignment:
Q  294 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    |||||||||||||| |||||||||| ||||||||||| || |||||||  |||| ||||||    
T  35682302 tgtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtg 35682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 326
Target Start/End: Original strand, 25617980 - 25618015
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacatt 326  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25617980 ttgtgtgacatagagttgggtgacattgatgacatt 25618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 42375145 - 42375086
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||  |||| ||||||    
T  42375145 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtg 42375086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 45591490 - 45591447
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattga 393  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||    
T  45591490 ttgtgtttctctctctttcacaagcattgtgacattatgattga 45591447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 3862681 - 3862619
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 357  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3862681 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3862619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 3862622 - 3862676
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  3862622 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 3862676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 3871438 - 3871376
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 357  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3871438 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 3871379 - 3871433
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  3871379 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 3871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 23444345 - 23444399
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  23444345 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 23444399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 30710035 - 30709989
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||    
T  30710035 gtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 51265507 - 51265453
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  51265507 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 51265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 24006147 - 24006098
Alignment:
Q  353 tgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||||||||||||||||| |||  ||||||||||  ||||||||    
T  24006147 tgtttctctctctttcacaagcattgtgtcattgtgattggccaatgtca 24006098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 54716349 - 54716386
Alignment:
Q  283 ggtagtatttgtgtgacatagagtttggtgacattgat 320  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  54716349 ggtagtatttgagtgacatagagttgggtgacattgat 54716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 402
Target Start/End: Complemental strand, 31532809 - 31532717
Alignment:
Q  310 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||| | |||||||||||||| |||| ||  ||||  |||| ||||||||||||| |||   || |||| ||||||||||| ||||||||    
T  31532809 gtgacataggtgacattgaccaatcacaacgtcacaatgtttgtatttctctctcttttacatatattgtgacattgtgattgaacaatgtca 31532717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 11016872 - 11016999
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||| |||||||||| |    
T  11016872 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggt 11016971  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||||||||||||||    
T  11016972 caatgtcaccaatgtcacccaactctat 11016999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 38975808 - 38975935
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| | ||||||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  ||| | ||||||    
T  38975808 gtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattataattgat 38975907  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||||||||| ||||||||    
T  38975908 caatgtcaccaatgtcacctaactctat 38975935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 41018363 - 41018256
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || ||||||||||      
T  41018363 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggc 41018264  T
Q  395 caatgtca 402  Q
    ||||||||    
T  41018263 caatgtca 41018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 411
Target Start/End: Original strand, 15027548 - 15027661
Alignment:
Q  298 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaa 397  Q
    ||||||||||   |||||||| |||||||||||||| |||||    ||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  15027548 acatagagttgtttgacattggtgacattgaccaatcacaataccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaa 15027647  T
Q  398 tgtcatcaatgtca 411  Q
    ||||| ||||||||    
T  15027648 tgtcaccaatgtca 15027661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 418
Target Start/End: Original strand, 4290548 - 4290671
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| ||||| |||| ||| ||||  |||| ||||||   |||| || |||||||||||||||||||||| || |||| ||||||||||      
T  4290548 gtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgctcgtgtttctctctctttcacaagaattgtgacattgtgattggc 4290647  T
Q  395 caatgtcatcaatgtcacccaact 418  Q
    |||||||| |||||||||||||||    
T  4290648 caatgtcaccaatgtcacccaact 4290671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 42628323 - 42628425
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || ||||||||||  |||| ||| ||||||||||||||||    
T  42628323 tgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactc 42628422  T
Q  420 tat 422  Q
    |||    
T  42628423 tat 42628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 45231985 - 45231908
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 372  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||| ||||||||||||||||||||    
T  45231985 gtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgcttttgtttctctctctttcacaa 45231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 419
Target Start/End: Complemental strand, 48000769 - 48000705
Alignment:
Q  355 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||    
T  48000769 tttctctctctttcacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactc 48000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 422
Target Start/End: Original strand, 48000795 - 48000867
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||||||||||||||||  ||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  48000795 ttgtgtttctctctctttcacagacattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48000867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 34854830 - 34854723
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| ||||||||  |||| ||||||   ||||  |||||||||| |||||||||||||||| |||  ||||||||||      
T  34854830 gtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtgtttctatctctttcacaagcattgtggcattgtgattggc 34854731  T
Q  395 caatgtca 402  Q
    ||||||||    
T  34854730 caatgtca 34854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 30217594 - 30217508
Alignment:
Q  289 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 376  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |   |||  || ||||||||||||||||||||||||    
T  30217594 atttgtgtgacatagagtttg-tgacattgatgacattcgccaatcacaatatcaaaatgtttatgtttctctctctttcacaagcat 30217508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 4649348 - 4649432
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctc--tctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||  |||| |||||| | |||| ||||||||||||  |||||||||||||||| |||| ||||||||||| ||||||||    
T  4649348 tgacattggtcaatcacaatgctacaatgcttgtgtttctctctctctttcacaagcatcgtgacattgtgattgaccaatgtca 4649432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 27028928 - 27028831
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 392  Q
    |||||||||| || |||||  ||| ||||||||  |||| |||||||  ||||  |||||||||||||||||||| |||||| |||| ||||||||||    
T  27028928 gtgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtgtttctctctctttcagaagcattgtgacattgtgattg 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 6225600 - 6225542
Alignment:
Q  355 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacc 413  Q
    ||||||||||||||| ||| |  |||| |||||||||||| ||||||||||||||||||    
T  6225600 tttctctctctttcataaggaccgtgacattgtgattgattaatgtcatcaatgtcacc 6225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 390
Target Start/End: Original strand, 10419486 - 10419556
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||  |||| | |||||| ||||||||||||||||||||||||||||||  | |||| ||||||||    
T  10419486 tgacattggtcaatcataatgttacaatacttgtgtttctctctctttcacaagttttgtgacattgtgat 10419556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 11017004 - 11016958
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||    
T  11017004 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgt 11016958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 22764820 - 22764754
Alignment:
Q  310 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 376  Q
    ||||||||| ||| |||| ||||| |||||||  ||||  |||||||||||||||||||||||||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcat 22764754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 7672021 - 7671949
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 392  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||    
T  7672021 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattg 7671949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 34854786 - 34854825
Alignment:
Q  383 attgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  34854786 attgtgattgaccaatgtcaccaatgtcacccaactctat 34854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 41018319 - 41018358
Alignment:
Q  383 attgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  41018319 attgtgattggtcaatgtcaccaatgtcacccaactctat 41018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 402
Target Start/End: Complemental strand, 41084251 - 41084208
Alignment:
Q  359 tctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||||||||| || |||||||| ||||||||||||||||    
T  41084251 tctctctttcacaaggattgtgatattatgattgatcaatgtca 41084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 42628430 - 42628371
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||| ||||| ||||||    
T  42628430 gtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtg 42628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 11016931 - 11016877
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  11016931 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 11016877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 29053424 - 29053342
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| | |  ||||||||||  ||||||||    
T  29053424 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgaggcattgtgattggccaatgtca 29053342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 38975867 - 38975813
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||  ||||||||||| |||||| | |||||||||||||||||||    
T  38975867 cacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctat 38975813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 48000869 - 48000827
Alignment:
Q  298 acatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    |||||||||| |||||||||| |||||||||||||| ||||||    
T  48000869 acatagagttgggtgacattggtgacattgaccaatcacaatg 48000827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 38975940 - 38975895
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    ||||||||||||| |||||||||| ||||||||| |||||| ||||    
T  38975940 gtgacatagagttaggtgacattggtgacattgatcaattataatg 38975895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 30734537 - 30734410
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  30734537 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 30734438  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    ||||||||||||||||||| ||||||||    
T  30734437 caatgtcatcaatgtcaccaaactctat 30734410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 33689175 - 33689286
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||||||||||| |||||||||||||| ||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  33689175 ttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 33689274  T
Q  391 tgatcaatgtca 402  Q
    ||  ||||||||    
T  33689275 tggccaatgtca 33689286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 416
Target Start/End: Complemental strand, 47492182 - 47492061
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| | | |||| ||||| |||||||  |||| ||||||||||||||| |||||||||||| |||| ||||||||||      
T  47492182 gtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtgtttctctctttttcacaagcattgtgacattgtgattggc 47492083  T
Q  395 caatgtcatcaatgtcacccaa 416  Q
    |||||||| |||||||||||||    
T  47492082 caatgtcaccaatgtcacccaa 47492061  T

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Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 51046208 - 51046075
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| | |||||||| |||||||| ||||| ||||||    ||| |||||||||||||||||||||||| ||| |||| ||| ||||||||    
T  51046208 gtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtgtttctctctctttcacaaacattgtgacattatgattgat 51046109  T
Q  395 caatgtcatcaatgtcacccaactctatatcatc 428  Q
    |||||||| |||| ||| |||||||||| |||||    
T  51046108 caatgtcaccaatatcatccaactctatgtcatc 51046075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 41752967 - 41753094
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  |||||||||| |||||||||||||||| |||  ||||||||||      
T  41752967 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctttctctttcacaagcattgtggcattgtgattggc 41753066  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| ||||||||| |||||||||    
T  41753067 caatgtcaccaatgtcactcaactctat 41753094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 43139851 - 43139737
Alignment:
Q  288 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 387  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||  ||| |||||    
T  43139851 tatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtgtttctctctctttcacaagcattctgacattgt 43139752  T
Q  388 gattgatcaatgtca 402  Q
    |||||| | ||||||    
T  43139751 gattgaccgatgtca 43139737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 422
Target Start/End: Original strand, 50524706 - 50524832
Alignment:
Q  296 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 395  Q
    ||||||||||||  |||| | ||||||||||||||||| | |||||  ||||  ||||||||||||||||||||||||||| || | |||||||||||      
T  50524706 tgacatagagttgagtgataatgatgacattgaccaatcataatgtcacaatgtttgtgtttctctctctttcacaagcatcgtaacattgtgattgact 50524805  T
Q  396 aatgtcatcaatgtcacccaactctat 422  Q
    ||| ||| ||||||||| |||||||||    
T  50524806 aatatcaccaatgtcactcaactctat 50524832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 55223231 - 55223338
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||| ||||| ||  ||||||| |||||||||||||||||||||||| |||| ||| ||||    
T  55223231 ttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaatattagaatacttatgtttctctctctttcacaagcattgtgacattatgat 55223330  T
Q  391 tgatcaat 398  Q
    ||| ||||    
T  55223331 tgaccaat 55223338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 1801556 - 1801454
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||||||||||||||    
T  1801556 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 1801457  T
Q  420 tat 422  Q
    |||    
T  1801456 tat 1801454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 402
Target Start/End: Original strand, 50549992 - 50550085
Alignment:
Q  309 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||| |||| |||||||||||||| ||||| || |||| |||||||||||||||||||||||| |||  ||| ||| ||||||||||||||||    
T  50549992 ggtgatattggtgacattgaccaatcacaatattacaatgcttgtgtttctctctctttcacaaacattatgacattatgattgatcaatgtca 50550085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 422
Target Start/End: Complemental strand, 45103180 - 45103117
Alignment:
Q  359 tctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||    
T  45103180 tctctctttcacaagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctat 45103117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 30734401 - 30734464
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||  |||| ||||||    
T  30734401 ttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtg 30734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 30476584 - 30476502
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  30476584 tgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 30476502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 422
Target Start/End: Complemental strand, 30580890 - 30580764
Alignment:
Q  296 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 395  Q
    ||||||||| || |||||||||  ||||||||  |||| |||||||  || | ||||||||||| ||||||||||||  || |||| ||| |||||| ||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtgtttctatctctttcacaaatattgtgacattatgattggtc 30580791  T
Q  396 aatgtcatcaatgtcacccaactctat 422  Q
    ||| ||| ||||||||||||| |||||    
T  30580790 aatatcaccaatgtcacccaattctat 30580764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 47677365 - 47677283
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||| |||| |||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||| | |||||||||    
T  47677365 tgacattgatcaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgatcggtcaatgtca 47677283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 29031814 - 29031746
Alignment:
Q  330 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 398  Q
    ||||||||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  29031814 caattacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaat 29031746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 30904296 - 30904368
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 416  Q
    |||| ||||||||||||||||||| | ||  || ||||||||||||||||| ||||||||| |||||||||||    
T  30904296 caatgcttgtgtttctctctcttttataaatattgtgatattgtgattgattaatgtcatcgatgtcacccaa 30904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 404
Target Start/End: Original strand, 18321657 - 18321763
Alignment:
Q  298 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaa 397  Q
    |||||||||| ||||| |||| ||||||||  |||| |||||||  |||   |||||||| ||||| ||||||| |||| |||| ||||||||||| |||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatgtcacaaagtttgtgtttttctctttttcacatgcattgtgacattgtgattgaccaa 18321756  T
Q  398 tgtcatc 404  Q
    |||||||    
T  18321757 tgtcatc 18321763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 33689238 - 33689184
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||    
T  33689238 cacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactctat 33689184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 39385798 - 39385746
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 372  Q
    |||||||| ||||| |||||||| ||||| |||| ||||||||||||||||||    
T  39385798 tgacattggccaatcacaatgttacaatatttgtatttctctctctttcacaa 39385746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 434
Target Start/End: Complemental strand, 50550037 - 50549970
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca-tcaagtat 434  Q
    ||||||||| || |||||||||||| ||||||||| |||| ||||||| || ||||||| ||||||||    
T  50550037 cacaagcattgtaatattgtgattggtcaatgtcaccaatatcacccagctttatatcactcaagtat 50549970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 1801449 - 1801494
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  1801449 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 1801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 18321703 - 18321659
Alignment:
Q  378 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| ||||||||||| |||||||| |||| ||||||||||||||    
T  18321703 gtgacattgtgattgaccaatgtcaccaatatcacccaactctat 18321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 428
Target Start/End: Original strand, 30580832 - 30580892
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 428  Q
    ||||||||  |||| ||||||||||| ||||||||  |||||||||||| ||||| |||||    
T  30580832 cacaagcactgtgacattgtgattgaccaatgtcacaaatgtcacccaattctatgtcatc 30580892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 319
Target Start/End: Original strand, 47677263 - 47677291
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattga 319  Q
    |||||||||||||||||||||||||||||    
T  47677263 ttgtgtgacatagagtttggtgacattga 47677291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 291 - 422
Target Start/End: Complemental strand, 7185 - 7055
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  7185 ttgtgtgacatagagtt-ggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 7087  T
Q  391 tgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||   ||| ||| |||||||||||||||||||    
T  7086 tggctaatatcaccaatgtcacccaactctat 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 16514427 - 16514554
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    ||||||||||||| |||||||||| |||||||| ||||| || |||    ||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  16514427 gtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 16514526  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||||||| |||| ||||||||||||||    
T  16514527 caatgtcaccaatctcacccaactctat 16514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 29508826 - 29508698
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgata-ttgtgattga 393  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  | |||||||||     
T  29508826 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcattgtggcatttgtgattgg 29508727  T
Q  394 tcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||||||||||||||||||    
T  29508726 tcaatgtcaccaatgtcacccaactctat 29508698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 14229453 - 14229361
Alignment:
Q  330 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||| ||||||||    
T  14229453 caatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaatgtcaccaatgtcaccgaactctat 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 38933615 - 38933717
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||| ||||||  ||| |||| ||||||||||||||||    
T  38933615 tgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggccaacgtcaccaatgtcacccaactc 38933714  T
Q  420 tat 422  Q
    |||    
T  38933715 tat 38933717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 6721970 - 6722081
Alignment:
Q  311 tgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtc 410  Q
    |||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||||||||| ||| |||| ||||||||||  |||| |||  ||||||    
T  6721970 tgacattggtgacattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggccaatatcactaatgtc 6722069  T
Q  411 acccaactctat 422  Q
    | ||||||||||    
T  6722070 aaccaactctat 6722081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 6217334 - 6217232
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||||||||||||||    
T  6217334 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 6217235  T
Q  420 tat 422  Q
    |||    
T  6217234 tat 6217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 422
Target Start/End: Complemental strand, 14470693 - 14470600
Alignment:
Q  329 ccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||| |||||||  ||||  ||||||||||||||||||||||||||| |  | |||||||||| ||||||||| |||||||||||||||||||    
T  14470693 ccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctat 14470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 405
Target Start/End: Original strand, 8534164 - 8534259
Alignment:
Q  310 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatca 405  Q
    ||||||||||||||||||| ||||||||||||   |||| |||||||||||||| ||||||||| || |||| ||||| ||||| |||| ||||||    
T  8534164 gtgacattgatgacattgatcaattacaatgtaaaaatatttgtgtttctctctatttcacaagaattgtgacattgtaattgaccaatatcatca 8534259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 422
Target Start/End: Original strand, 24115919 - 24116050
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    |||||||| ||||||||  || |||||| | |||||| ||||| |||||||| |||| | |||||||| | ||||||||||||||| | || ||||||||    
T  24115919 ttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcctgtgtttcacactctttcacaagcattgcgacattgtgat 24116018  T
Q  391 tgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||| |||| |||  |||| |||||||||||||    
T  24116019 tgaccaatatcactaatggcacccaactctat 24116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 14470591 - 14470654
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||| ||||||    
T  14470591 ttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtg 14470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 402
Target Start/End: Original strand, 15011297 - 15011390
Alignment:
Q  309 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||||| ||| |||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  15011297 ggtgacattggtgatattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 15011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 404
Target Start/End: Original strand, 2893991 - 2894075
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 404  Q
    |||||||| ||||| ||||| |  |||| ||||| |||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  2893991 tgacattggccaatcacaatctcacaatgcttgtatttctctctctttcacaagcattgtgacactgtgattgaccaatgtcatc 2894075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 422
Target Start/End: Original strand, 14892318 - 14892390
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| ||||||||||||||| ||| || || | |||||||||||||||||||| |||||||| ||||||||||    
T  14892318 ttgtctttctctctctttcataagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctat 14892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 422
Target Start/End: Original strand, 37961764 - 37961836
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||||||  ||| |||| |||||||||    
T  37961764 ttgtgtttctctctctttcacaagcattgtggcattgtgattggtcaatgtcacaaatatcactcaactctat 37961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 45213939 - 45213892
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaa 338  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  45213939 ttgtgtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 2828612 - 2828694
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||| ||||| |||||||   ||| ||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||    
T  2828612 tgacattggccaatcacaatgtcaaaatgcttgtgtttctctctctttcagaagcattgtgacattgtgattggccaatgtca 2828694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 14892407 - 14892339
Alignment:
Q  283 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 351  Q
    ||||| ||||| ||||||||||||| | |||||||| ||||||||| |||| |||||||| ||||||||    
T  14892407 ggtagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatactt 14892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 420
Target Start/End: Complemental strand, 29925680 - 29925580
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  ||| |||||||  |  |||||||| |||| |||||||||||    
T  29925680 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattctgacattgtgaggggccaatgtcaccaatatcacccaactc 29925581  T
Q  420 t 420  Q
    |    
T  29925580 t 29925580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 33018620 - 33018680
Alignment:
Q  367 tcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcat 427  Q
    |||||||||| |||| ||||||||||| |||| ||| ||||||||||||||||||| ||||    
T  33018620 tcacaagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtcat 33018680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 37762128 - 37762029
Alignment:
Q  303 gagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||| |||| |||| |||||| |  |||| ||||| |  |||| ||||||||||| |||||||||||||||| | || |||||||||| |||||||||    
T  37762128 gagtttagtgatattggtgacatgggtcaatcacaatatcacaatgcttgtgtttctttctctttcacaagcattgcgacattgtgattggtcaatgtca 37762029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 45213892 - 45213930
Alignment:
Q  384 ttgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  45213892 ttgtgattggtcaatgtcatcaatgtcacccaactctat 45213930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 6722013 - 6721965
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 416  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||||    
T  6722013 cacaagcattgtgatattgtgattggtcaatgtcaccaatgtcatccaa 6721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 16514559 - 16514500
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||||  |||| ||||||    
T  16514559 gtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtg 16514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 29508693 - 29508736
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaa 338  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||    
T  29508693 gtgacatagagttgggtgacattggtgacattgaccaatcacaa 29508736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 6217227 - 6217272
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 340  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  6217227 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 6217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 9173116 - 9173035
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 376  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||||| ||||||| ||||| | ||||||    
T  9173116 gtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgtatttctctttcttttataagcat 9173035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 49813 - 49711
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||||||| ||||| ||||||   |||| ||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  49813 tgacattggccaatcacaatgccacaatgcttgtgtttctctttctttcacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactc 49714  T
Q  420 tat 422  Q
    |||    
T  49713 tat 49711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 49706 - 49765
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||  |||| ||||||    
T  49706 gtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtg 49765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 24618711 - 24618609
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 419  Q
    |||| ||||||||| |||||||  |||| ||||||||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||||||||    
T  24618711 tgacgttgaccaatcacaatgtcacaatgcttgtgtttctctctctttcataagcattatgacattgtgattgatcaatgtcaccaatgtcacccaactc 24618612  T
Q  420 tat 422  Q
    |||    
T  24618611 tat 24618609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 422
Target Start/End: Original strand, 17750902 - 17751032
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 390  Q
    ||||||||||||||||| | |||||||| ||||||||  |||| |||||||  ||||  |||| ||| |||||||||||||||||| |||| ||||||||    
T  17750902 ttgtgtgacatagagtt-gatgacattggtgacattggtcaatcacaatgtcacaatgtttgtatttatctctctttcacaagcattgtgacattgtgat 17751000  T
Q  391 tgatcaatgtcatcaatgtcacccaactctat 422  Q
     |  ||||||||||||| ||||||||||||||    
T  17751001 cggccaatgtcatcaatatcacccaactctat 17751032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 12343152 - 12343230
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| |||| ||||||||||||||    
T  12343152 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatctcacccaactctat 12343230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 551307 - 551193
Alignment:
Q  288 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 387  Q
    |||||| |||||||||| || | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||  |||||    
T  551307 tatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtggcattgt 551208  T
Q  388 gattgatcaatgtca 402  Q
    |||||| ||||||||    
T  551207 gattgaccaatgtca 551193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 13043509 - 13043587
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||   |||||||| |||| |||| |||||||||    
T  13043509 caatgcttgtgtttctctctctttcacaagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctat 13043587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 24587464 - 24587558
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga 389  Q
    ||||||||||||| |||||||||  ||||||||  |||| |||||||  |||| |||||||||||| || |||||||||||| |||| |||||||    
T  24587464 gtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtgtttctcgctttttcacaagcattgtgacattgtga 24587558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 10521959 - 10521877
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    ||||||||  |||| |||||||   ||| ||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||    
T  10521959 tgacattggtcaatcacaatgtcataatgcttgtgtttctctctctttcataagcattgtgacattgtgattggccaatgtca 10521877  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 24587523 - 24587469
Alignment:
Q  368 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    ||||||||| |||| ||||||||||| ||||||||  ||||||||||||||||||    
T  24587523 cacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctat 24587469  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 2315381 - 2315332
Alignment:
Q  353 tgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||| ||||||||||||| ||| |||| ||||||||||||||||||||    
T  2315381 tgtttcgctctctttcacaaacattgtgacattgtgattgatcaatgtca 2315332  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 377
Target Start/End: Original strand, 31654333 - 31654390
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatg 377  Q
    |||||||| ||||| |||||||  |||| |||||||||||||||||||||||| ||||    
T  31654333 tgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaaacatg 31654390  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 17751041 - 17750978
Alignment:
Q  291 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||||||| ||||| ||||||||||||| || || |||||||  |||| ||||||    
T  17751041 ttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtg 17750978  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 24975815 - 24975760
Alignment:
Q  367 tcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||||||||| |||  ||||||||||| |||||||| |||||||| ||||||||||    
T  24975815 tcacaagcattgtggcattgtgattgaccaatgtcaccaatgtcagccaactctat 24975760  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 24618604 - 24618650
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 341  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||    
T  24618604 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgt 24618650  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 7384552 - 7384492
Alignment:
Q  366 ttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca 426  Q
    ||||||| |||  ||| |||||||||| |||||||||  ||||||| ||||||||||||||    
T  7384552 ttcacaaacattatgacattgtgattggtcaatgtcactaatgtcatccaactctatatca 7384492  T

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Target: scaffold0180 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 422
Target Start/End: Complemental strand, 19202 - 19130
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 422  Q
    |||||||||||| |||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  19202 ttgtgtttctctttcttccacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctat 19130  T

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Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 19119 - 19184
Alignment:
Q  289 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 354  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||| |||||||  |||| ||||||    
T  19119 atttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtg 19184  T

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Target: scaffold0161 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 27355 - 27228
Alignment:
Q  295 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 394  Q
    |||| |||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||| ||||||||||||||||||||| ||  ||| ||||||||||      
T  27355 gtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttctgtttctctctctttcacaagaattatgacattgtgattggc 27256  T
Q  395 caatgtcatcaatgtcacccaactctat 422  Q
    |||| |||  ||||||||||||||||||    
T  27255 caatatcactaatgtcacccaactctat 27228  T

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Target: scaffold1033 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtc 401  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

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Target: scaffold1029 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  344 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtc 401  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

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Target: scaffold0536 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 413
Target Start/End: Complemental strand, 5010 - 4909
Alignment:
Q  309 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 408  Q
    ||||| |||| ||| ||||  ||||||||||||| ||   ||| ||||| |||||||||||||||||| || |||||||||||| || |||||| |||||    
T  5010 ggtgatattggtgatattggtcaattacaatgttaca---cttatgtttgtctctctttcacaagcattgtaatattgtgattggtcgatgtcaccaatg 4914  T
Q  409 tcacc 413  Q
    |||||    
T  4913 tcacc 4909  T

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Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 63785 - 63867
Alignment:
Q  320 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 402  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  63785 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 63867  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 2967 - 2919
Alignment:
Q  350 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 398  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| |||||    
T  2967 ttgtgtttctctctctttcacaaacattgtgacattgtgattggtcaat 2919  T

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