View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15773_low_14 (Length: 373)
Name: NF15773_low_14
Description: NF15773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15773_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 37191920 - 37192241
Alignment:
| Q |
16 |
atgaaacgtggcccatactgattggatggggtcctaactcaacaatagtcatgtgactattgcgtttctgactcacgtgggttctgtaaaagtggaatct |
115 |
Q |
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| T |
37191920 |
atgaaacgtggcccatactgattggatggggtcctaactcaacaatagtcatgtgactattgcgtttctgactcacgtgggttctgtaaaagtggaatct |
37192019 |
T |
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| Q |
116 |
tatgggtgacgtcacgataatgaccgacacgtgtcatgatttcgtgatatttaacgaagaaatttaatgtttccacatccgttgaataagagacatcctc |
215 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37192020 |
tatgggtgacgtcacgataatgactgacacgtgtcatgatttcgtgatgtttaacgaagaaatttaacgtttccacatccgttgaataagagacatcctc |
37192119 |
T |
|
| Q |
216 |
ctttacatggtggaaacatcctcccttgtctctgtaggtcattatcttcacatgataagaggatgtatgcacccgtcgacatgataaatacttcatccaa |
315 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37192120 |
ctttgcatggtggaaacatcctcccttgtctctgtaggtcattatcttcacatgataagaggatgtatgcacccgtcgacatgataaatacttcatccaa |
37192219 |
T |
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| Q |
316 |
actagcttaactagttaagcac |
337 |
Q |
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|||||||||||||||||||||| |
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| T |
37192220 |
actagcttaactagttaagcac |
37192241 |
T |
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