View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15773_low_28 (Length: 305)
Name: NF15773_low_28
Description: NF15773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15773_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 17 - 286
Target Start/End: Original strand, 277484 - 277753
Alignment:
| Q |
17 |
cataggaatggataaatatagtttgctatttctgtgctttcatctttatcctatttattattattagcatttctctctgnnnnnnnccctctcaattcaa |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
277484 |
cataggaatggataaatatagtttgctatttctgtgctttcatctttatcctatttattattattagcatttctctctgtttttttccctctcaattcaa |
277583 |
T |
|
| Q |
117 |
cttataataactaacttcccctaacaaaattgaatgcacatttgacgtagaaaataactttctcctctcctatttattattttatttagtacgtaattaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
277584 |
cttataataactaacttcccctaacaaaattgaatgcacatttgacgtagaaaataactttctcctctcctatttattattttatttagtacgtaattaa |
277683 |
T |
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| Q |
217 |
aaattgatgacattgcattacattcttaatcaaattcttatccacacagacacggcattaatttttgttt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
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| T |
277684 |
aaattgatgacattgcattacattcttaatcaaattcttatccacacagacacggcattgacttttgttt |
277753 |
T |
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