View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15773_low_56 (Length: 205)

Name: NF15773_low_56
Description: NF15773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15773_low_56
NF15773_low_56
[»] chr1 (22 HSPs)
chr1 (15-190)||(26494323-26494498)
chr1 (72-136)||(24363319-24363383)
chr1 (137-190)||(27485889-27485942)
chr1 (137-190)||(29761336-29761389)
chr1 (137-190)||(36910867-36910920)
chr1 (137-190)||(51270799-51270852)
chr1 (98-190)||(24363238-24363330)
chr1 (144-190)||(6436706-6436752)
chr1 (144-190)||(14172924-14172970)
chr1 (144-190)||(35525363-35525409)
chr1 (137-190)||(41803210-41803263)
chr1 (137-190)||(42570958-42571011)
chr1 (137-190)||(48227497-48227550)
chr1 (137-190)||(49428325-49428378)
chr1 (144-190)||(13973918-13973964)
chr1 (144-190)||(18974303-18974349)
chr1 (144-190)||(46142621-46142667)
chr1 (137-176)||(49925582-49925621)
chr1 (144-190)||(22528470-22528516)
chr1 (144-190)||(49397638-49397683)
chr1 (87-136)||(13284410-13284459)
chr1 (138-174)||(35185961-35185997)
[»] chr5 (10 HSPs)
chr5 (72-190)||(35927249-35927367)
chr5 (137-190)||(20197062-20197115)
chr5 (137-190)||(34683098-34683151)
chr5 (144-190)||(25499073-25499119)
chr5 (137-190)||(3602329-3602382)
chr5 (144-190)||(35566263-35566309)
chr5 (137-190)||(8538842-8538895)
chr5 (137-190)||(11347666-11347719)
chr5 (137-174)||(1972348-1972385)
chr5 (137-174)||(6792661-6792698)
[»] chr4 (20 HSPs)
chr4 (72-190)||(9718155-9718281)
chr4 (137-190)||(9490451-9490504)
chr4 (144-190)||(6281693-6281739)
chr4 (144-190)||(49572093-49572139)
chr4 (144-190)||(51427369-51427415)
chr4 (137-190)||(1043718-1043771)
chr4 (137-190)||(49422924-49422977)
chr4 (137-190)||(56139879-56139932)
chr4 (144-190)||(34152454-34152500)
chr4 (144-190)||(44559495-44559541)
chr4 (137-190)||(956622-956675)
chr4 (137-190)||(34528977-34529030)
chr4 (137-190)||(39589756-39589809)
chr4 (144-190)||(37867443-37867489)
chr4 (137-174)||(21170437-21170474)
chr4 (75-136)||(21412184-21412245)
chr4 (75-136)||(21411200-21411261)
chr4 (137-174)||(36775702-36775739)
chr4 (134-190)||(21411165-21411221)
chr4 (134-190)||(21412224-21412280)
[»] chr8 (9 HSPs)
chr8 (137-190)||(22550053-22550106)
chr8 (137-190)||(41276046-41276099)
chr8 (137-190)||(18439469-18439522)
chr8 (137-190)||(40703337-40703390)
chr8 (137-190)||(24862322-24862375)
chr8 (137-190)||(41856168-41856221)
chr8 (137-190)||(44051419-44051472)
chr8 (137-190)||(42604427-42604480)
chr8 (137-174)||(42168152-42168189)
[»] chr7 (15 HSPs)
chr7 (137-190)||(48271637-48271690)
chr7 (72-136)||(1641900-1641964)
chr7 (137-190)||(28978402-28978455)
chr7 (137-190)||(41623067-41623120)
chr7 (144-190)||(36392990-36393036)
chr7 (144-190)||(46861364-46861410)
chr7 (137-190)||(34141837-34141890)
chr7 (137-190)||(42683389-42683442)
chr7 (137-190)||(48193962-48194015)
chr7 (20-64)||(19081297-19081341)
chr7 (144-190)||(21186464-21186510)
chr7 (144-190)||(30354011-30354057)
chr7 (144-190)||(40589515-40589561)
chr7 (137-190)||(45362452-45362505)
chr7 (137-174)||(42735950-42735987)
[»] chr6 (11 HSPs)
chr6 (137-190)||(13403796-13403849)
chr6 (137-190)||(13617069-13617122)
chr6 (137-190)||(34802354-34802407)
chr6 (137-190)||(29067471-29067524)
chr6 (137-190)||(29109060-29109113)
chr6 (137-190)||(32026793-32026846)
chr6 (137-190)||(32036852-32036905)
chr6 (139-190)||(35020424-35020475)
chr6 (98-134)||(30764178-30764214)
chr6 (98-134)||(30764205-30764241)
chr6 (98-134)||(30764232-30764268)
[»] chr3 (18 HSPs)
chr3 (137-190)||(2429463-2429516)
chr3 (137-190)||(24701467-24701520)
chr3 (137-190)||(49611144-49611197)
chr3 (137-190)||(51695128-51695181)
chr3 (72-136)||(20375187-20375251)
chr3 (144-190)||(43478023-43478069)
chr3 (144-190)||(45099640-45099686)
chr3 (144-190)||(52568610-52568656)
chr3 (137-190)||(7247037-7247090)
chr3 (137-190)||(13895072-13895125)
chr3 (137-190)||(34692472-34692525)
chr3 (137-190)||(41578904-41578957)
chr3 (137-190)||(43570861-43570914)
chr3 (137-190)||(55206110-55206163)
chr3 (144-190)||(49217918-49217964)
chr3 (87-136)||(27096896-27096945)
chr3 (137-186)||(30193531-30193580)
chr3 (138-190)||(55268247-55268299)
[»] chr2 (10 HSPs)
chr2 (137-190)||(16582791-16582844)
chr2 (137-190)||(43492441-43492494)
chr2 (137-190)||(2918535-2918588)
chr2 (137-190)||(23408702-23408755)
chr2 (137-190)||(40676588-40676641)
chr2 (149-187)||(41498291-41498329)
chr2 (144-180)||(35492563-35492599)
chr2 (137-174)||(17538126-17538163)
chr2 (137-190)||(19470791-19470844)
chr2 (137-174)||(24107980-24108017)
[»] scaffold0176 (1 HSPs)
scaffold0176 (137-190)||(2762-2815)
[»] scaffold0192 (1 HSPs)
scaffold0192 (139-190)||(17125-17176)
[»] scaffold0589 (1 HSPs)
scaffold0589 (137-174)||(5261-5298)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 4e-83; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 26494323 - 26494498
Alignment:
Q  15 gattcttttgtttgaaacttcctggtatttttggctatgatgatgaattgtaatcgcattagtctttatttaaatacacaatttttaatcgaaattattc 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26494323 gattcttttgtttgaaacttcttggtatttttggctatgatgatgaattgtaatcgcatcagtctttatttaaatacacaatttttaatcgaaattattc 26494422  T
Q  115 aatacgcaagtttaatcgaaatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  26494423 aatacgcaagtttaatcgaaatacgcaattttaatcgaaattattccaaatgcgattttattctaagtaccataat 26494498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 24363383 - 24363319
Alignment:
Q  72 attagtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  24363383 attagtctttattcgaatacgcaatttttaatcgaaattattcaatacgcgagtttaaccgaaat 24363319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 27485942 - 27485889
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  27485942 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 27485889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 29761389 - 29761336
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  29761389 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 29761336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 36910867 - 36910920
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  36910867 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 36910920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 51270799 - 51270852
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  51270799 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 51270852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 24363330 - 24363238
Alignment:
Q  98 tttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||| |||||||||||||||||| | |||||||||||||| ||||||| |  |||||||||  ||| ||||||| |||  ||||||||||||    
T  24363330 tttaaccgaaattattcaatacgcgattttaatcgaaatacacgattttgaatgaaattattcaaaacgcgatttcattcaaagtaccataat 24363238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 6436706 - 6436752
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  6436706 tttaatcgaaattatttcaaatacgattttattctaagtaccataat 6436752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 14172970 - 14172924
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  14172970 tttaatcgaaattattccaaatgcgattttattctaagtaccataat 14172924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 35525409 - 35525363
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35525409 tttaatcaaaattatttcaaatgcgattttattctaagtaccataat 35525363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 41803210 - 41803263
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  41803210 acgcgactttaatcgaaattattttaaatgcgattttattctaagcaccataat 41803263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 42571011 - 42570958
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||| |||||| |||||||||||||||| |||||||||||||    
T  42571011 acgcgactttaatcgatattattccaaatgcgattttattctaagtaccataat 42570958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 48227497 - 48227550
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  48227497 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataat 48227550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 49428325 - 49428378
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  49428325 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataat 49428378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 13973918 - 13973964
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||    
T  13973918 tttaatcgaaattattccaaatgcgattttattctaagtagcataat 13973964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 18974303 - 18974349
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||    
T  18974303 tttaatcgaaattattccaaatgtgattttattctaagtaccataat 18974349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 46142667 - 46142621
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||    
T  46142667 tttaatcgaaattattccaaatgcggttttattctaagtaccataat 46142621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 49925621 - 49925582
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttatt 176  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  49925621 acgcgactttaatcgaaattattccaaatgcgattttatt 49925582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 22528470 - 22528516
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||| |||||||| ||||||| |||||||| |||||||||||||    
T  22528470 tttaatcaaaattattccaaatgcaattttattctaagtaccataat 22528516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 49397638 - 49397683
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||    
T  49397638 tttaatcgaaattattccaa-tgcgattttattctaagtaccataat 49397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 13284410 - 13284459
Alignment:
Q  87 aatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    ||||| |||||||||||| |||||||||||||||| | ||||||| ||||    
T  13284410 aatacgcaatttttaatcaaaattattcaatacgcgactttaatcaaaat 13284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 35185961 - 35185997
Alignment:
Q  138 cgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  35185961 cgcgaatttaatcgaaattattccaaatgcgatttta 35185997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 35927367 - 35927249
Alignment:
Q  72 attagtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaatcgaaattatttcaaatgcgatt 171  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||    
T  35927367 attagtctttattcaaatacgcaatttttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaaccgaaattattcaaaacgcgatt 35927268  T
Q  172 ttattttaagtaccataat 190  Q
    |||||  ||||||||||||    
T  35927267 ttattcaaagtaccataat 35927249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 20197062 - 20197115
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  20197062 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 20197115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 34683151 - 34683098
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  34683151 acgcgactttaatcgaaattatttcaaatgcaattttattctaagtaccataat 34683098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 25499073 - 25499119
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  25499073 tttaatcgaaattatttcaaatgcgattttattctaagtaccgtaat 25499119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 3602329 - 3602382
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  3602329 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataat 3602382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 35566263 - 35566309
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||    
T  35566263 tttaatcgaaattattccaaatgtgattttattctaagtaccataat 35566309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 8538842 - 8538895
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| ||||||| ||||||||||| ||||||||||    
T  8538842 acgcgactttaatcaaaattattccaaatgcaattttattttatgtaccataat 8538895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 11347666 - 11347719
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| || ||||| |||||||||||||||| |||||||||||||    
T  11347666 acgcgactttaatcaaagttattccaaatgcgattttattctaagtaccataat 11347719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 1972348 - 1972385
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  1972348 acgcgactttaatcgaaattattccaaatgcgatttta 1972385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 6792698 - 6792661
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  6792698 acgcgactttaatcgaaattattccaaatgcgatttta 6792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 9718155 - 9718281
Alignment:
Q  72 attagtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcga--------aatacgcgattttaatcgaaattatttcaa 163  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |        ||||||||| ||||||||||||||||  ||    
T  9718155 attagtctttattcgaatacgcaatttttaatcgaaattattcaatacgcgagtttaatcaaaattattcaatacgcgactttaatcgaaattattcaaa 9718254  T
Q  164 atgcgattttattttaagtaccataat 190  Q
    | |||||||||||  ||||||||||||    
T  9718255 acgcgattttattaaaagtaccataat 9718281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 9490451 - 9490504
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  9490451 acgcgactttaatcgaaattattccaaatgcgattttattttaagtaccataat 9490504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 6281739 - 6281693
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6281739 tttaatcgaaattatttcaaatgcgattttattctaagtaccataat 6281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 49572093 - 49572139
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  49572093 tttaatcgaaattattccaaatgcgattttattttaagtaccataat 49572139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 51427415 - 51427369
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  51427415 tttaatcgaaattatttcaaatgcgattttattctaagtaccataat 51427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 1043718 - 1043771
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  1043718 acgcgactttaatcgaaattatttcaaatgcaattttattctaagtaccataat 1043771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 49422977 - 49422924
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  49422977 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 49422924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 56139879 - 56139932
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  56139879 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 56139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 34152500 - 34152454
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  34152500 tttaatcgaaattatttcaaatgcgattttattctaagtatcataat 34152454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 44559541 - 44559495
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  44559541 tttaatcgaaattattccaaatgcgattttattctaagtaccataat 44559495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 956675 - 956622
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  956675 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataat 956622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 34529030 - 34528977
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  34529030 acgcgagtttaatcgaaattattccaaatgcgattttattcgaagtaccataat 34528977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 39589756 - 39589809
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||    
T  39589756 acgcgactttaatcgaaattattccaaatgcgatcttattctaagtaccataat 39589809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 37867443 - 37867489
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||    
T  37867443 tttaattgaaattattccaaatgcgattttattctaagtaccataat 37867489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 21170437 - 21170474
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21170437 acgcgactttaatcgaaattatttcaaatgcgatttta 21170474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 21412184 - 21412245
Alignment:
Q  75 agtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||| | | ||||||| ||||    
T  21412184 agtctttattcaaatacgcaatttttaattgaaattattcaatacacgactttaatcaaaat 21412245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 21411261 - 21411200
Alignment:
Q  75 agtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||||| | | ||||||| ||||    
T  21411261 agtctttattcgaatacgcaatttttaattgaaattattcaatacacgactttaatcaaaat 21411200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 36775739 - 36775702
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  36775739 acgcgactttaatcaaaattatttcaaatgcgatttta 36775702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 21411221 - 21411165
Alignment:
Q  134 aatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||| ||| ||||||| ||||||||  ||| |||||||||||| ||||||||||||    
T  21411221 aatacacgactttaatcaaaattattcaaaacgcgattttatttaaagtaccataat 21411165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 21412224 - 21412280
Alignment:
Q  134 aatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||| ||| ||||||| ||||||||  ||| |||||||||||| ||||||||||||    
T  21412224 aatacacgactttaatcaaaattattcaaaacgcgattttatttaaagtaccataat 21412280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 22550053 - 22550106
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  22550053 acgcgagtttaatcgaaattatttcaaatgcgattttattctaagtaccataat 22550106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 41276046 - 41276099
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  41276046 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataat 41276099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 18439522 - 18439469
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  18439522 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 18439469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 40703337 - 40703390
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  40703337 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 40703390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 24862322 - 24862375
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||| |||||||||||| |||||||||||||||| |||||||||||||    
T  24862322 acgcgactttcatcgaaattattccaaatgcgattttattctaagtaccataat 24862375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 41856221 - 41856168
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||| ||||| |||||||||||||||||||| |||||||||||||    
T  41856221 acgcgactttaattgaaatgatttcaaatgcgattttattctaagtaccataat 41856168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 44051419 - 44051472
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||| |||||||||||| |||||||| |||||||||||||    
T  44051419 acgcgactttaatcgaaactatttcaaatgcaattttattctaagtaccataat 44051472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 42604427 - 42604480
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||| ||||||||||  ||||||||||||    
T  42604427 acgcgactttaatcgaaattattccaaatacgattttattccaagtaccataat 42604480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 42168189 - 42168152
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  42168189 acgcgactttaatcgaaattattccaaatgcgatttta 42168152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 48271637 - 48271690
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  48271637 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataat 48271690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 1641964 - 1641900
Alignment:
Q  72 attagtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    |||||||||||||  ||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  1641964 attagtctttattcgaatacgcaatttttaatagaaattattcaatacgcaactttaatcgaaat 1641900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 28978455 - 28978402
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28978455 acgcgactttaaccgaaattatttcaaatgcgattttattctaagtaccataat 28978402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 41623067 - 41623120
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  41623067 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 41623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 36393036 - 36392990
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  36393036 tttaatcgaaattattacaaatgcgattttattctaagtaccataat 36392990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 46861410 - 46861364
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  46861410 tttaatcgaaattattccaaatgcgattttattctaagtaccataat 46861364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 34141837 - 34141890
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||||||||||||    
T  34141837 acgcgactttaatcgaaattattccaaatgcgattgtattataagtaccataat 34141890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 42683389 - 42683442
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||| ||||||    
T  42683389 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaacataat 42683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 48193962 - 48194015
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||| |||||||||||| |||||||||||||||| |||||||||||||    
T  48193962 acgcgactttgatcgaaattattccaaatgcgattttattctaagtaccataat 48194015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 19081297 - 19081341
Alignment:
Q  20 ttttgtttgaaacttcctggtatttttggctatgatgatgaattg 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  19081297 ttttgtttgaaacttcttggtaattttggctatgatgatgaattg 19081341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 21186510 - 21186464
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||    
T  21186510 tttaatcgaaattattccaaatgcgattttattctaagtactataat 21186464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 30354057 - 30354011
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||    
T  30354057 tttaatcgaaattattccaaatgtgattttattctaagtaccataat 30354011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 40589515 - 40589561
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||    
T  40589515 tttaatcggaattattccaaatgcgattttattctaagtaccataat 40589561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 45362505 - 45362452
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||| || |||||||||||||||| ||| |||||||||    
T  45362505 acgcgactttaatcgaaattcttccaaatgcgattttattctaaataccataat 45362452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 42735950 - 42735987
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  42735950 acgcgactttaatcgaaattattccaaatgcgatttta 42735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 13403796 - 13403849
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  13403796 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataat 13403849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 13617122 - 13617069
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  13617122 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 13617069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 34802407 - 34802354
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  34802407 acgcgactttaatagaaattatttcaaatgcgattttattctaagtaccataat 34802354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 29067471 - 29067524
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  29067471 acgcgagtttaatcgaaattattccaaatgcgattttattccaagtaccataat 29067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 29109060 - 29109113
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  29109060 acgcgagtttaatcgaaattattccaaatgcgattttattccaagtaccataat 29109113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 32026846 - 32026793
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||    
T  32026846 acgcgactttaatcaaaattattccaaatgtgattttattctaagtaccataat 32026793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 32036905 - 32036852
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||    
T  32036905 acgcgactttaatcaaaattattccaaatgtgattttattctaagtaccataat 32036852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 35020475 - 35020424
Alignment:
Q  139 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||| ||||||| |||||||| |||||||||||||||| || ||||||||||    
T  35020475 gcgactttaatcaaaattattgcaaatgcgattttattctaggtaccataat 35020424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 30764214 - 30764178
Alignment:
Q  98 tttaatcgaaattattcaatacgcaagtttaatcgaa 134  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  30764214 tttaatcgaatttattcaatacgcaactttaatcgaa 30764178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 30764241 - 30764205
Alignment:
Q  98 tttaatcgaaattattcaatacgcaagtttaatcgaa 134  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  30764241 tttaatcgaatttattcaatacgcaactttaatcgaa 30764205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 30764268 - 30764232
Alignment:
Q  98 tttaatcgaaattattcaatacgcaagtttaatcgaa 134  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  30764268 tttaatcgaaattattcaatacacaactttaatcgaa 30764232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 2429463 - 2429516
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2429463 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataat 2429516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 24701520 - 24701467
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  24701520 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 24701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 49611144 - 49611197
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  49611144 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 49611197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 51695181 - 51695128
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  51695181 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 51695128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 20375251 - 20375187
Alignment:
Q  72 attagtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    |||||||||||||  |||||||||||||||||| |||||| ||||||||| | ||||||||||||    
T  20375251 attagtctttattcgaatacacaatttttaatcaaaattaatcaatacgcgactttaatcgaaat 20375187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 43478023 - 43478069
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||    
T  43478023 tttaatcgaaattatttcaaatgcgactttattctaagtaccataat 43478069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 45099686 - 45099640
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  45099686 tttaatcgaaattattccaaatgcgattttattctaagtaccataat 45099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 52568656 - 52568610
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||    
T  52568656 tttaatcgaaattattccaaatgcgattttattttaagtacgataat 52568610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 7247037 - 7247090
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||| |||||||| |||||||||||||    
T  7247037 acgcgactttaatcgaaattattccaaatgcaattttattctaagtaccataat 7247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 13895125 - 13895072
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||||||||||||  ||||||||||||||| |||||||||||||    
T  13895125 acgcgactttaatcgaaattattctaaatgcgattttattctaagtaccataat 13895072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 34692525 - 34692472
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||| ||||||||| |||||||||||||    
T  34692525 acgcgactttaatcgaaattattccaaatgtgattttattataagtaccataat 34692472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 41578904 - 41578957
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  41578904 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataat 41578957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 43570861 - 43570914
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||| ||||||||| |||||||||||||||| |||||||||||||    
T  43570861 acgcgactttaattgaaattattccaaatgcgattttattctaagtaccataat 43570914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 55206163 - 55206110
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  55206163 acgcgactttaatcgaaattatttcaattgcgatcttattctaagtaccataat 55206110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 49217964 - 49217918
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  49217964 tttaatcaaaattattccaaatgcgattttattctaagtaccataat 49217918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 27096945 - 27096896
Alignment:
Q  87 aatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 136  Q
    ||||| |||||||||||| | |||||||||||||| | ||||||||||||    
T  27096945 aatacccaatttttaatcaagattattcaatacgcgactttaatcgaaat 27096896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 30193531 - 30193580
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtacca 186  Q
    |||||| |||||||||||||||| ||||||||| ||||||  ||||||||    
T  30193531 acgcgactttaatcgaaattattccaaatgcgaatttattcaaagtacca 30193580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 55268299 - 55268247
Alignment:
Q  138 cgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    ||||| |||||||||||||||| ||||||  |||||||| |||||| ||||||    
T  55268299 cgcgactttaatcgaaattattccaaatgaaattttattctaagtagcataat 55268247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 16582791 - 16582844
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  16582791 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 16582844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 43492441 - 43492494
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  43492441 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataat 43492494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 2918588 - 2918535
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||||| || |||||||||||||    
T  2918588 acgcgactttaatcgaaattattccaaatgcgattttgttctaagtaccataat 2918535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 23408702 - 23408755
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||| |||||||||| ||||||||||||||| |||||||||||||    
T  23408702 acgcgactttaattgaaattatttaaaatgcgattttattctaagtaccataat 23408755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 40676641 - 40676588
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| |||||||| ||||||| |||||||||||||    
T  40676641 acgcgactttaatcgaaattattccaaatgcggttttattctaagtaccataat 40676588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 41498329 - 41498291
Alignment:
Q  149 tcgaaattatttcaaatgcgattttattttaagtaccat 187  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  41498329 tcgaaattatttcaaatgcgattttattctaagtaccat 41498291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 35492563 - 35492599
Alignment:
Q  144 tttaatcgaaattatttcaaatgcgattttattttaa 180  Q
    |||||||||||||||| ||||||||||||||||||||    
T  35492563 tttaatcgaaattattccaaatgcgattttattttaa 35492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 17538163 - 17538126
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  17538163 acgcgactttaatcgaaattattccaaatgcgatttta 17538126  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 19470844 - 19470791
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| ||||||| ||||||||  ||||||| ||||||| |||||||||||||    
T  19470844 acgcgactttaatcaaaattattctaaatgcggttttattctaagtaccataat 19470791  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 24108017 - 24107980
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  24108017 acgcgactttaatcgaaattattccaaatgcgatttta 24107980  T

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Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 2762 - 2815
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||||||||||||    
T  2762 acgcgactttaatcgaaattattccaaatgcgattgtattataagtaccataat 2815  T

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Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 17176 - 17125
Alignment:
Q  139 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataat 190  Q
    |||| ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  17176 gcgactttaatcaaaattattccaaatgcgattttattctaagtaccataat 17125  T

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Target: scaffold0589 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 5261 - 5298
Alignment:
Q  137 acgcgattttaatcgaaattatttcaaatgcgatttta 174  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  5261 acgcgactttaatcgaaattattccaaatgcgatttta 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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