View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15774_low_1 (Length: 412)
Name: NF15774_low_1
Description: NF15774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15774_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 1 - 410
Target Start/End: Complemental strand, 2065122 - 2064713
Alignment:
| Q |
1 |
taatactctagaccttctcttcacaaaaacgtcgtcgttatggatactacatttacaccaccgtcaccacaccgttcatctccgttacaaaacataagcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2065122 |
taatactctagaccttctcttcacaaaaacgtcgtcgttatggatactacatttacaccaccgtcaccacaccgttcatctccgttacaaaacataagcc |
2065023 |
T |
|
| Q |
101 |
ctagcattctcatcattataacaatcctcgccgtcaccgtcatcgtttctcttctaatctgcttcctcctccgccacctcaactgtcaccgtctccgccg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2065022 |
ctagcattctcatcattataacaatcctcgccgtcaccgtcatcgtttctcttctaatctgcttcctcctccgccacctcaactgtcaccgtctccgccg |
2064923 |
T |
|
| Q |
201 |
taatccatctccaacaaccaccgaacctcctcctcacactcacagccgtcgtatctctccagaaacaacacctccctccgtcatcgactcactccctctc |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2064922 |
taatccatctccaacaaccaccgaacctcctcctcacactcacagccgtcgtatctctccagaaacaacacctccctccgtcatcgactcactccctctc |
2064823 |
T |
|
| Q |
301 |
ttcacattctcatccatctcccgtcgttcctccgccgtcaccgccgctgattgcgctgtctgtttatcaaagttccgtaactccgacctcctccgttctc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2064822 |
ttcacattctcatccatctcccgtcgttcctccgccgtcaccgccgctgactgcgctgtctgtttatcaaagttccgtaactccgacctcctccgttctc |
2064723 |
T |
|
| Q |
401 |
ttcctctctg |
410 |
Q |
| |
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|||||||||| |
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| T |
2064722 |
ttcctctctg |
2064713 |
T |
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